Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000647

Physical Location & Seq

Genomic Coordinates Reverse (-)

7803863 .. 7807984

Gene Structure 4122 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G13430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGCTTCTGTTATCTCTTCCTCTCCTTTTCTATGCAAATCATCCTCCAAGAGTGATTTGGGGATTTCTTCGTTTCCTAAATCTTCTCAGATTTCGATTCATCGATGTCAGAAGAAATCGATCTCACGGAAGATTGTTTCCGTTATGGCTCCTCAAAAGGATCGGTCTCCTGGAACTACAGGATCGGTGAAAACTGGGATGACAATGACGGAGAAGATTCTAGCTAGAGCTTCGGAGAAGTCATTAGTGGTTCCTGGTGATAACATTTGGGTTAATGTTGATGTTCTTATGACTCATGATGTTTGTGGTCCTGGTGCTTTTGGTATCTTCAAGAGAGAGTTTGGTGAAAAAGCCAAGGTTTGGGATCCGGAGAAGATTGTTGTGATTCCGGATCATTATATTTTCACTGCTGATAAGCGTGCAAACCGGAATGTTGACATCATGAGGGAGCATTGCAGGGAACAGAATATTAAGTATTTCTATGATATCACTGACCTTGGAAATTTTAAGGCTAATCCTGACTACAAAGGTGTTTGCCATGTTGCACTTGCACAAGAAGGTCATTGCAGGCCAGGAGAGGTTTTGTTAGGAACAGACTCACACACTTGTACTGCTGGAGCATTTGGTCAATTTGCTACAGGGATTGGAAACACTGATGCAGGTTTTGTGTTAGGCACTGGAAAAATCCTCCTTAAGGTTCCACCAACGATGAGGTTTATCTTGGATGGTGAGATGCCTAGTTATTTGCAAGCAAAGGATCTGATTTTACAAATTATTGGTGAAATATCTGTTGCTGGTGCAACTTACAAGACGATGGAGTTCAGTGGTACAACTATCGAAAGTCTGAGTATGGAAGAAAGAATGACATTGTGCAACATGGTTGTGGAAGCTGGGGGAAAGAATGGTGTCATCCCTCCTGATGCGACGACATTAAATTATGTTGAGAATAGGACATCTGTACCATTTGAGCCAGTATATAGTGATGGAAATGCAAGCTTTGTCGCAGATTATAGATTTGACGTGTCAAAGCTGGAGCCTGTGGTGGCTAAGCCTCATTCTCCTGACAACCGAGCTCTAGCTAGAGAATGCAAAGACGTGAAAATTGACAGAGTATACATCGGTTCTTGTACTGGTGGGAAGACAGAGGATTTTATGGCTGCAGCTAAACTTTTCCACGCAGCAGGAAGAAAGGTCAAAGTTCCAACTTTCCTTGTCCCGGCTACTCAGAAGGTGTGGATGGATGTGTATGCTCTCCCGGTACCTGGAGCAGGTGGAAAGACATGTGCGCAGATCTTTGAAGAAGCTGGCTGTGACACACCAGCCAGCCCTAGCTGTGGTGCTTGCCTTGGTGGCCCAGCAGACACCTACGCTCGCTTGAATGAACCTCAAGTGTGTGTCTCAACGACAAACAGGAACTTCCCCGGTCGGATGGGACACAAAGAAGGGCAAATTTACTTAGCGTCTCCTTACACTGCTGCAGCCTCGGCTTTAACCGGCCGTGTCGCTGACCCAAGGGAGTTCTTGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0016143 GO:0016144 GO:0016853 GO:0016866 GO:0019748 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046686 GO:0050486 GO:0050896 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00290 ko00660 ko00966 ko01100 ko01110 ko01210 ko01230 map00290 map00660 map00966 map01100 map01110 map01210 map01230

Pfam Domains

Protein Families

Aconitase

Protein Analysis

509

Amino Acids

55.01

Weight (kDa)

8.08

Isoelectric Point (pI)

38.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aconitase	PF00330	88 - 358	6.7e-58	Aconitase family (aconitate hydratase)
Aconitase	PF00330	361 - 499	4.8e-27	Aconitase family (aconitate hydratase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000647)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13430
fragaria_vesca	FvH4_4g04720 FvH4_4g04720 FvH4_4g04720 FvH4_4g04720 FvH4_4g04720 FvH4_5g09890
malus_domestica	MD13G1222700.v1.1 MD13G1222900.v1.1 MD16G1227200.v1.1
prunus_persica	Prupe.1G049300_v2.0.a1
pyrus_communis	pycom13g19670 pycom16g19040
rosa_chinensis	RchiOBHm_Chr4g0395521 RchiOBHm_Chr4g0395531 RchiOBHm_Chr6g0260271 RchiOBHm_Chr6g0278291
rosa_laevigata	RLG00000009126 RLG00000009614 RLG00000009616 RLG00000019332 RLG00000035454
rosa_multiflora	Rmu_co8195818.1_g000001 Rmu_co8220062.1_g000001 Rmu_sc0000041.1_g000006 Rmu_sc0000744.1_g000082 Rmu_sc0001142.1_g000007 Rmu_sc0001669.1_g000055 Rmu_sc0003400.1_g000015 Rmu_sc0005229.1_g000033 Rmu_sc0007340.1_g000006 Rmu_sc0008351.1_g000002 Rmu_sc0008351.1_g000016 Rmu_sc0039027.1_g000001
rosa_roxburghii	Rroxscaffold_4G00324270 Rroxscaffold_5G00340460 Rroxscaffold_5G00340480
rosa_rugosa	Rorug01G0023800 Rorug01G0050600 Rorug02G0280700 Rorug03G0355400 Rorug07G0181700
rosa_samantha	Rh1CG053700 Rh1DG057900 Rh3CG159300 Rh3DG159800 Rh3DG297100 Rh4AG060800 Rh4AG061300 Rh4AG061500 Rh4BG059800 Rh4BG060100 Rh4CG065500 Rh4CG065800 Rh4DG055700 Rh4DG056000 Rh5BG283600 Rh5BG284500 Rh5BG323300 Rh5BG330600 Rh5BG516600 Rh5CG076000 Rh5CG289900 Rh5DG060900 Rh5DG293300 Rh5DG293900 Rh5DG334300 Rh5DG342000 Rh6AG129800 Rh6DG223600
rosa_wichuraiana	Rw0G000910 Rw2G008950 Rw2G012250 Rw3G021630 Rw4G005010 Rw4G005020 Rw4G005030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1259
Acc16I	TGCGCA	1 cut(s)	1287
Acc36I	ACCTGC	2 cut(s)	650, 1259
Acc65I	GGTACC	1 cut(s)	1258
AccB1I	GGYRCC	1 cut(s)	1258
AccB7I	CCANNNNNTGG	1 cut(s)	360
AccI	GTMKAC	1 cut(s)	1113
AccIII	TCCGGA	2 cut(s)	367, 388
AclWI	GGATC	6 cut(s)	168, 190, 359, 372, 399, 765
AcoI	YGGCCR	1 cut(s)	1495
AcsI	RAATTY	2 cut(s)	502, 1449
AfaI	GTAC	5 cut(s)	610, 829, 960, 1129, 1260
AfiI	CCNNNNNNNGG	6 cut(s)	360, 694, 1216, 1262, 1268, 1334
AflII	CTTAAG	1 cut(s)	692
AflIII	ACRYGT	2 cut(s)	1020, 1280
AgsI	TTSAA	3 cut(s)	331, 1298, 1378
AjiI	CACGTC	2 cut(s)	1021, 1096
AjnI	CCWGG	5 cut(s)	169, 253, 310, 571, 1261
Alw21I	GWGCWC	1 cut(s)	1075
Alw26I	GTCTC	3 cut(s)	171, 1402, 1467
AlwI	GGATC	6 cut(s)	168, 190, 359, 372, 399, 765
Aor13HI	TCCGGA	2 cut(s)	367, 388
AoxI	GGCC	3 cut(s)	569, 1351, 1495
ApeKI	GCWGC	5 cut(s)	1157, 1160, 1178, 1475, 1478
ApoI	RAATTY	2 cut(s)	502, 1449
Asp718I	GGTACC	1 cut(s)	1258
AspLEI	GCGC	1 cut(s)	1288
AspS9I	GGNCC	2 cut(s)	308, 1352
AsuC2I	CCSGG	3 cut(s)	1217, 1256, 1422
AsuHPI	GGTGA	5 cut(s)	199, 269, 356, 740, 791
AvaII	GGWCC	1 cut(s)	308
BaeI	ACNNNNGTAYC	2 cut(s)	942, 975
BamHI	GGATCC	1 cut(s)	364
BanI	GGYRCC	1 cut(s)	1258
BanII	GRGCYC	1 cut(s)	1075
BbsI	GAAGAC	1 cut(s)	1145
Bbv12I	GWGCWC	1 cut(s)	1075
BbvI	GCAGC	5 cut(s)	1144, 1172, 1190, 1462, 1490
BccI	CCATC	5 cut(s)	719, 808, 977, 1231, 1423
BceAI	ACGGC	1 cut(s)	1482
BciT130I	CCWGG	5 cut(s)	171, 255, 312, 573, 1263
BcnI	CCSGG	3 cut(s)	1217, 1256, 1422
BcoDI	GTCTC	3 cut(s)	171, 1402, 1467
BfaI	CTAG	6 cut(s)	221, 225, 738, 1076, 1080, 1329
BfmI	CTRYAG	4 cut(s)	177, 636, 1158, 1476
BfrI	CTTAAG	1 cut(s)	692
BfuAI	ACCTGC	2 cut(s)	650, 1259
BglI	GCCNNNNNGGC	1 cut(s)	1350
BglII	AGATCT	1 cut(s)	1290
BisI	GCNGC	5 cut(s)	1158, 1161, 1179, 1476, 1479
BlpI	GCTNAGC	1 cut(s)	1047
BlsI	GCNGC	5 cut(s)	1159, 1162, 1180, 1477, 1480
Bme1390I	CCNGG	8 cut(s)	171, 255, 312, 573, 1217, 1256, 1263, 1422
Bme18I	GGWCC	1 cut(s)	308
BmgBI	CACGTC	2 cut(s)	1021, 1096
BmgT120I	GGNCC	2 cut(s)	308, 1352
BmiI	GGNNCC	6 cut(s)	150, 252, 366, 699, 1035, 1260
BmrFI	CCNGG	8 cut(s)	171, 255, 312, 573, 1217, 1256, 1263, 1422
BmrI	ACTGGG	1 cut(s)	204
BmsI	GCATC	3 cut(s)	646, 723, 910
BmuI	ACTGGG	1 cut(s)	204
BpiI	GAAGAC	1 cut(s)	1145
BpmI	CTGGAG	3 cut(s)	636, 1052, 1284
Bpu1102I	GCTNAGC	1 cut(s)	1047
BpuEI	CTTGAG	1 cut(s)	1371
BpuMI	CCSGG	3 cut(s)	1217, 1256, 1422
Bsa29I	ATCGAT	2 cut(s)	103, 119
BsaI	GGTCTC	1 cut(s)	171
BsaJI	CCNNGG	6 cut(s)	354, 496, 1345, 1420, 1482, 1511
BsaWI	WCCGGW	3 cut(s)	367, 388, 426
Bsc4I	CCNNNNNNNGG	6 cut(s)	360, 694, 1216, 1262, 1268, 1334
Bse118I	RCCGGY	1 cut(s)	1493
Bse1I	ACTGG	4 cut(s)	199, 682, 971, 1135
Bse3DI	GCAATG	2 cut(s)	451, 562
BseAI	TCCGGA	2 cut(s)	367, 388
BseBI	CCWGG	5 cut(s)	171, 255, 312, 573, 1263
BseCI	ATCGAT	2 cut(s)	103, 119
BseDI	CCNNGG	6 cut(s)	354, 496, 1345, 1420, 1482, 1511
BseGI	GGATG	7 cut(s)	41, 204, 730, 909, 1242, 1246, 1434
BseLI	CCNNNNNNNGG	6 cut(s)	360, 694, 1216, 1262, 1268, 1334
BseMI	GCAATG	2 cut(s)	451, 562
BseMII	CTCAG	3 cut(s)	101, 836, 1238
BseNI	ACTGG	4 cut(s)	199, 682, 971, 1135
BseRI	GAGGAG	1 cut(s)	141
BseX3I	CGGCCG	1 cut(s)	1495
BseXI	GCAGC	5 cut(s)	1144, 1172, 1190, 1462, 1490
BseYI	CCCAGC	2 cut(s)	890, 1354
Bsh1285I	CGRYCG	2 cut(s)	1426, 1498
BshFI	GGCC	3 cut(s)	571, 1353, 1497
BshNI	GGYRCC	1 cut(s)	1258
BshVI	ATCGAT	2 cut(s)	103, 119
BsiEI	CGRYCG	2 cut(s)	1426, 1498
BsiHKAI	GWGCWC	1 cut(s)	1075
BsiSI	CCGG	7 cut(s)	368, 389, 427, 1217, 1256, 1422, 1494
BslFI	GGGAC	2 cut(s)	1199, 1446
BslI	CCNNNNNNNGG	6 cut(s)	360, 694, 1216, 1262, 1268, 1334
BsmAI	GTCTC	3 cut(s)	171, 1402, 1467
BsmBI	CGTCTC	1 cut(s)	1467
BsmFI	GGGAC	2 cut(s)	1199, 1446
BsmI	GAATGC	1 cut(s)	1091
BsnI	GGCC	3 cut(s)	571, 1353, 1497
Bso31I	GGTCTC	1 cut(s)	171
Bsp1286I	GDGCHC	1 cut(s)	1075
Bsp13I	TCCGGA	2 cut(s)	367, 388
Bsp143I	GATC	7 cut(s)	120, 160, 182, 364, 391, 757, 1290
Bsp1720I	GCTNAGC	1 cut(s)	1047
BspANI	GGCC	3 cut(s)	571, 1353, 1497
BspCNI	CTCAG	3 cut(s)	100, 837, 1237
BspDI	ATCGAT	2 cut(s)	103, 119
BspEI	TCCGGA	2 cut(s)	367, 388
BspHI	TCATGA	2 cut(s)	295, 441
BspLI	GGNNCC	6 cut(s)	150, 252, 366, 699, 1035, 1260
BspMAI	CTGCAG	2 cut(s)	1162, 1480
BspMI	ACCTGC	2 cut(s)	650, 1259
BspPI	GGATC	6 cut(s)	168, 190, 359, 372, 399, 765
BspT107I	GGYRCC	1 cut(s)	1258
BspTI	CTTAAG	1 cut(s)	692
BspTNI	GGTCTC	1 cut(s)	171
BsrDI	GCAATG	2 cut(s)	451, 562
BsrFI	RCCGGY	1 cut(s)	1493
BsrI	ACTGG	4 cut(s)	199, 682, 971, 1135
BssAI	RCCGGY	1 cut(s)	1493
BssECI	CCNNGG	6 cut(s)	354, 496, 1345, 1420, 1482, 1511
BssMI	GATC	7 cut(s)	120, 160, 182, 364, 391, 757, 1290
BssNAI	GTATAC	1 cut(s)	1114
BssT1I	CCWWGG	4 cut(s)	354, 496, 1345, 1511
Bst1107I	GTATAC	1 cut(s)	1114
Bst2UI	CCWGG	5 cut(s)	171, 255, 312, 573, 1263
Bst6I	CTCTTC	1 cut(s)	22
BstAFI	CTTAAG	1 cut(s)	692
BstC8I	GCNNGC	8 cut(s)	420, 569, 750, 994, 1306, 1324, 1342, 1372
BstDEI	CTNAG	5 cut(s)	87, 845, 1047, 1224, 1456
BstENI	CCTNNNNNAGG	2 cut(s)	692, 1266
BstF5I	GGATG	7 cut(s)	41, 204, 730, 909, 1242, 1246, 1434
BstHHI	GCGC	1 cut(s)	1288
BstKTI	GATC	7 cut(s)	123, 163, 185, 367, 394, 760, 1293
BstMAI	GTCTC	3 cut(s)	171, 1402, 1467
BstMBI	GATC	7 cut(s)	120, 160, 182, 364, 391, 757, 1290
BstMCI	CGRYCG	2 cut(s)	1426, 1498
BstMWI	GCNNNNNNNGC	2 cut(s)	1350, 1484
BstNI	CCWGG	5 cut(s)	171, 255, 312, 573, 1263
BstNSI	RCATGY	1 cut(s)	1284
BstSCI	CCNGG	8 cut(s)	169, 253, 310, 571, 1215, 1254, 1261, 1420
BstSFI	CTRYAG	4 cut(s)	177, 636, 1158, 1476
BstV1I	GCAGC	5 cut(s)	1144, 1172, 1190, 1462, 1490
BstV2I	GAAGAC	1 cut(s)	1145
BstX2I	RGATCY	3 cut(s)	364, 757, 1290
BstYI	RGATCY	3 cut(s)	364, 757, 1290
BstZ17I	GTATAC	1 cut(s)	1114
BstZI	CGGCCG	1 cut(s)	1495
Bsu15I	ATCGAT	2 cut(s)	103, 119
BsuRI	GGCC	3 cut(s)	571, 1353, 1497
BsuTUI	ATCGAT	2 cut(s)	103, 119
BtrI	CACGTC	2 cut(s)	1021, 1096
BtsCI	GGATG	7 cut(s)	41, 204, 730, 909, 1242, 1246, 1434
BtsI	GCAGTG	2 cut(s)	405, 1470
BtsIMutI	CAGTG	6 cut(s)	405, 489, 651, 675, 829, 1470
BveI	ACCTGC	2 cut(s)	650, 1259
Cac8I	GCNNGC	8 cut(s)	420, 569, 750, 994, 1306, 1324, 1342, 1372
CciI	TCATGA	2 cut(s)	295, 441
CfoI	GCGC	1 cut(s)	1288
Cfr10I	RCCGGY	1 cut(s)	1493
Cfr13I	GGNCC	2 cut(s)	308, 1352
ClaI	ATCGAT	2 cut(s)	103, 119
CseI	GACGC	1 cut(s)	1449
Csp6I	GTAC	5 cut(s)	609, 828, 959, 1128, 1259
CviAII	CATG	5 cut(s)	296, 442, 539, 877, 1281
CviQI	GTAC	5 cut(s)	609, 828, 959, 1128, 1259
DdeI	CTNAG	5 cut(s)	87, 845, 1047, 1224, 1456
DpnI	GATC	7 cut(s)	122, 162, 184, 366, 393, 759, 1292
DpnII	GATC	7 cut(s)	120, 160, 182, 364, 391, 757, 1290
EaeI	YGGCCR	1 cut(s)	1495
EagI	CGGCCG	1 cut(s)	1495
Eam1104I	CTCTTC	1 cut(s)	22
EarI	CTCTTC	1 cut(s)	22
Ecl136II	GAGCTC	1 cut(s)	1073
EclXI	CGGCCG	1 cut(s)	1495
Eco130I	CCWWGG	4 cut(s)	354, 496, 1345, 1511
Eco24I	GRGCYC	1 cut(s)	1075
Eco31I	GGTCTC	1 cut(s)	171
Eco32I	GATATC	1 cut(s)	487
Eco47I	GGWCC	1 cut(s)	308
Eco52I	CGGCCG	1 cut(s)	1495
Eco53kI	GAGCTC	1 cut(s)	1073
EcoICRI	GAGCTC	1 cut(s)	1073
EcoNI	CCTNNNNNAGG	2 cut(s)	692, 1266
EcoRII	CCWGG	5 cut(s)	169, 253, 310, 571, 1261
EcoRV	GATATC	1 cut(s)	487
EcoT14I	CCWWGG	4 cut(s)	354, 496, 1345, 1511
EcoT38I	GRGCYC	1 cut(s)	1075
ErhI	CCWWGG	4 cut(s)	354, 496, 1345, 1511
Esp3I	CGTCTC	1 cut(s)	1467
FaeI	CATG	5 cut(s)	299, 445, 542, 880, 1284
FaqI	GGGAC	2 cut(s)	1199, 1446
FatI	CATG	5 cut(s)	295, 441, 538, 876, 1280
FblI	GTMKAC	1 cut(s)	1113
Fnu4HI	GCNGC	5 cut(s)	1158, 1161, 1179, 1476, 1479
FokI	GGATG	7 cut(s)	28, 211, 737, 896, 1249, 1253, 1441
FriOI	GRGCYC	1 cut(s)	1075
Fsp4HI	GCNGC	5 cut(s)	1158, 1161, 1179, 1476, 1479
FspBI	CTAG	6 cut(s)	221, 225, 738, 1076, 1080, 1329
FspI	TGCGCA	1 cut(s)	1287
GlaI	GCGC	1 cut(s)	1287
GluI	GCNGC	5 cut(s)	1158, 1161, 1179, 1476, 1479
GsaI	CCCAGC	2 cut(s)	894, 1358
GsuI	CTGGAG	3 cut(s)	636, 1052, 1284
HaeIII	GGCC	3 cut(s)	571, 1353, 1497
HapII	CCGG	7 cut(s)	368, 389, 427, 1217, 1256, 1422, 1494
HgaI	GACGC	1 cut(s)	1449
HhaI	GCGC	1 cut(s)	1288
Hin1II	CATG	5 cut(s)	299, 445, 542, 880, 1284
Hin6I	GCGC	1 cut(s)	1286
HinP1I	GCGC	1 cut(s)	1286
HincII	GTYRAC	1 cut(s)	436
HindII	GTYRAC	1 cut(s)	436
HindIII	AAGCTT	1 cut(s)	994
HinfI	GANTC	5 cut(s)	97, 217, 292, 385, 596
HpaII	CCGG	7 cut(s)	368, 389, 427, 1217, 1256, 1422, 1494
HphI	GGTGA	5 cut(s)	199, 269, 356, 740, 791
Hpy166II	GTNNAC	2 cut(s)	436, 1114
Hpy188I	TCNGA	7 cut(s)	90, 111, 235, 762, 846, 1227, 1428
Hpy188III	TCNNGA	8 cut(s)	296, 331, 368, 389, 442, 518, 917, 1061
Hpy8I	GTNNAC	2 cut(s)	436, 1114
Hpy99I	CGWCG	1 cut(s)	928
HpyAV	CCTTC	3 cut(s)	551, 1222, 1436
HpyCH4IV	ACGT	2 cut(s)	1020, 1095
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1350, 1484
HpyF3I	CTNAG	5 cut(s)	87, 845, 1047, 1224, 1456
HpySE526I	ACGT	2 cut(s)	1020, 1095
Hsp92II	CATG	5 cut(s)	299, 445, 542, 880, 1284
HspAI	GCGC	1 cut(s)	1286
Kpn2I	TCCGGA	2 cut(s)	367, 388
KpnI	GGTACC	1 cut(s)	1262
Kzo9I	GATC	7 cut(s)	120, 160, 182, 364, 391, 757, 1290
LmnI	GCTCC	5 cut(s)	154, 448, 617, 1033, 1265
Lsp1109I	GCAGC	5 cut(s)	1144, 1172, 1190, 1462, 1490
LweI	GCATC	3 cut(s)	646, 723, 910
MaeI	CTAG	6 cut(s)	221, 225, 738, 1076, 1080, 1329
MaeII	ACGT	2 cut(s)	1020, 1095
MaeIII	GTNAC	1 cut(s)	1310
MalI	GATC	7 cut(s)	122, 162, 184, 366, 393, 759, 1292
MboI	GATC	7 cut(s)	120, 160, 182, 364, 391, 757, 1290
MflI	RGATCY	3 cut(s)	364, 757, 1290
MhlI	GDGCHC	1 cut(s)	1075
MluCI	AATT	6 cut(s)	502, 629, 771, 934, 1101, 1449
MlyI	GAGTC	2 cut(s)	286, 590
MmeI	TCCRAC	2 cut(s)	1226, 1406
MroI	TCCGGA	2 cut(s)	367, 388
MseI	TTAA	6 cut(s)	273, 471, 507, 693, 932, 1490
MslI	CAYNNNNRTG	1 cut(s)	881
MspCI	CTTAAG	1 cut(s)	692
MspI	CCGG	7 cut(s)	368, 389, 427, 1217, 1256, 1422, 1494
MspR9I	CCNGG	8 cut(s)	171, 255, 312, 573, 1217, 1256, 1263, 1422
Mva1269I	GAATGC	1 cut(s)	1091
MvaI	CCWGG	5 cut(s)	171, 255, 312, 573, 1263
MwoI	GCNNNNNNNGC	2 cut(s)	1350, 1484
NciI	CCSGG	3 cut(s)	1217, 1256, 1422
NdeII	GATC	7 cut(s)	120, 160, 182, 364, 391, 757, 1290
NlaIII	CATG	5 cut(s)	299, 445, 542, 880, 1284
NlaIV	GGNNCC	6 cut(s)	150, 252, 366, 699, 1035, 1260
NmeAIII	GCCGAG	1 cut(s)	1463
NmuCI	GTSAC	1 cut(s)	1310
NsbI	TGCGCA	1 cut(s)	1287
NspI	RCATGY	1 cut(s)	1284
PagI	TCATGA	2 cut(s)	295, 441
PaqCI	CACCTGC	1 cut(s)	1259
PciI	ACATGT	1 cut(s)	1280
PctI	GAATGC	1 cut(s)	1091
PfeI	GAWTC	3 cut(s)	97, 217, 385
PflMI	CCANNNNNTGG	1 cut(s)	360
PfoI	TCCNGGA	1 cut(s)	169
PkrI	GCNGC	5 cut(s)	1159, 1162, 1180, 1477, 1480
PleI	GAGTC	2 cut(s)	286, 590
PpsI	GAGTC	2 cut(s)	286, 590
PscI	ACATGT	1 cut(s)	1280
Psp124BI	GAGCTC	1 cut(s)	1075
Psp6I	CCWGG	5 cut(s)	169, 253, 310, 571, 1261
PspFI	CCCAGC	2 cut(s)	890, 1354
PspGI	CCWGG	5 cut(s)	169, 253, 310, 571, 1261
PspN4I	GGNNCC	6 cut(s)	150, 252, 366, 699, 1035, 1260
PspPI	GGNCC	2 cut(s)	308, 1352
PstI	CTGCAG	2 cut(s)	1162, 1480
PsuI	RGATCY	3 cut(s)	364, 757, 1290
RsaI	GTAC	5 cut(s)	610, 829, 960, 1129, 1260
RsaNI	GTAC	5 cut(s)	609, 828, 959, 1128, 1259
RseI	CAYNNNNRTG	1 cut(s)	881
SacI	GAGCTC	1 cut(s)	1075
SaqAI	TTAA	6 cut(s)	273, 471, 507, 693, 932, 1490
SatI	GCNGC	5 cut(s)	1158, 1161, 1179, 1476, 1479
Sau3AI	GATC	7 cut(s)	120, 160, 182, 364, 391, 757, 1290
Sau96I	GGNCC	2 cut(s)	308, 1352
SchI	GAGTC	2 cut(s)	286, 590
ScrFI	CCNGG	8 cut(s)	171, 255, 312, 573, 1217, 1256, 1263, 1422
SduI	GDGCHC	1 cut(s)	1075
SfaNI	GCATC	3 cut(s)	646, 723, 910
SfcI	CTRYAG	4 cut(s)	177, 636, 1158, 1476
SinI	GGWCC	1 cut(s)	308
SmiMI	CAYNNNNRTG	1 cut(s)	881
SmlI	CTYRAG	2 cut(s)	692, 1386
SmoI	CTYRAG	2 cut(s)	692, 1386
Sse9I	AATT	6 cut(s)	502, 629, 771, 934, 1101, 1449
SspI	AATATT	1 cut(s)	469
SspMI	CTAG	6 cut(s)	221, 225, 738, 1076, 1080, 1329
SstI	GAGCTC	1 cut(s)	1075
StyD4I	CCNGG	8 cut(s)	169, 253, 310, 571, 1215, 1254, 1261, 1420
StyI	CCWWGG	4 cut(s)	354, 496, 1345, 1511
TaiI	ACGT	2 cut(s)	1023, 1098
TaqI	TCGA	4 cut(s)	95, 103, 119, 837
TaqII	GACCGA	1 cut(s)	153
TasI	AATT	6 cut(s)	502, 629, 771, 934, 1101, 1449
TatI	WGTACW	2 cut(s)	608, 1127
TfiI	GAWTC	3 cut(s)	97, 217, 385
Tru1I	TTAA	6 cut(s)	273, 471, 507, 693, 932, 1490
Tru9I	TTAA	6 cut(s)	273, 471, 507, 693, 932, 1490
TscAI	CASTG	6 cut(s)	412, 496, 658, 682, 829, 1477
TseFI	GTSAC	1 cut(s)	1310
TseI	GCWGC	5 cut(s)	1157, 1160, 1178, 1475, 1478
Tsp45I	GTSAC	1 cut(s)	1310
TspDTI	ATGAA	2 cut(s)	89, 1395
TspGWI	ACGGA	3 cut(s)	130, 142, 224
TspRI	CASTG	6 cut(s)	412, 496, 658, 682, 829, 1477
Van91I	CCANNNNNTGG	1 cut(s)	360
Vha464I	CTTAAG	1 cut(s)	692
VpaK11BI	GGWCC	1 cut(s)	308
XagI	CCTNNNNNAGG	2 cut(s)	692, 1266
XapI	RAATTY	2 cut(s)	502, 1449
XceI	RCATGY	1 cut(s)	1284
XcmI	CCANNNNNNNNNTGG	1 cut(s)	55
XmiI	GTMKAC	1 cut(s)	1113
XspI	CTAG	6 cut(s)	221, 225, 738, 1076, 1080, 1329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.