Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0000647

Physical Location & Seq

Genomic Coordinates Reverse (-)

12368778 .. 12373037

Gene Structure 4260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG065500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGGCTTACTCCACTGTTGCTCCATCCTTCACCTCCTTCATCAACAAAAACACCAAGAAGGATTTGGATCTCTCTGCTTTCTCTTCCACATCGCCGGCTTCATTTCAGGGATGCAAGGGATCGGTCTCCAAGAAAATCTGCTCTGTCATGGCGCCACAGCAATCGGAGCGGAAGCCAGCCACTACTGGCTCGGTCAAGACGGGAATGACGATGACCGAGAAAATATTGGCTAGGGCTTCTGAGAAAACCCATTTGAGCCCAGGTGACAATGTTTGGGTTAACATTGATGTTCTGATGACCCATGATGTCTGTGGCCCTGGTTCCTTTGGAATCTTCAAGAAAGAGTTTGGCCAGAATGCTAAGGTTTGGGATCGAGAAAAGATTGTAGTCATACCTGACCATTATATATTCACTACTGATGAGCGTGCAAACCGTAATGTGGATACCTTGAGGGATTTCTGCACGGAGCAGAACATCAAGTACTTCTATGATATCAAGGATCTTGGTAACTTTCAGGCTAACCCAGATTACAAGGGTGTATGCCATATTGCTCTTGCTCAAGAAGGTCATTGCAGGCCTGGAGAGGTGCTGCTGGGTACAGATTCTCACACCTGCACCACTGGAGCTTTTGGACAATTTGCTACTGGAATCGGGATCACTGATGCTGGTTTCGTATTGGGCACTGGGAAACTGTTGCTCAAGATGGAAGAGAGGATGACATTATGCAACATGGTTATTGAAGCTGGGGGTAAAAATGGTATCGTCCCTGCTGATAGCACTACATACAAGTACCTTGAGGATATAACGTCTGTACCCTATGAACCTGTGTACAGTGATGATACAGCTAGATTTCTTACAGAGTACAGATTTGATATCTCAAAACTGGAGCCATTGGTGGCAAAGCCTCATTCTCCAGATAACCGTGCTTTAGCGAGAGAGTGCAAAGATGTGAAAATTGACAGAGTCTATATTGGATCTTGTACTGGTGGGAAAACAGAGGATTTTATGGCTGCTGCTAAAGTTTTTCTAGCTTCAGGAAAGAAGGTCAAAGTACCCACTTTTCTTGTACCTGCTACACAAAAGGTTTGGATGGACGTGTACAGTCTTCCAGTGCCAGGATCAGGTGGCAAGACTTGCTCGCAGATATTTGAGGAAGCTGGTTGTGACACACCTGCAAGTCCCACCTGTGGTGCTTGCATGGGTGGTCCTAGAGACACTTATGCTCGCTTGAATGAACCACAGGTATGTGTCTCTACTACGAACAGGAACTTCCCCGGCAGAATGGGCCACAAGGAAGGCCAGATATATCTTGCTTCACCATATACAGCTGCAGCATCTGCTTTGACAGGTTATGTCACCGACCCAAGAGAGTTTTTGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0016143 GO:0016144 GO:0016853 GO:0016866 GO:0019748 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046686 GO:0050486 GO:0050896 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00290 ko00660 ko00966 ko01100 ko01110 ko01210 ko01230 map00290 map00660 map00966 map01100 map01110 map01210 map01230

Pfam Domains

Protein Families

Aconitase

Protein Analysis

460

Amino Acids

50.13

Weight (kDa)

7.07

Isoelectric Point (pI)

36.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aconitase	PF00330	83 - 231	1.4e-15	Aconitase family (aconitate hydratase)
Aconitase	PF00330	228 - 309	1.3e-13	Aconitase family (aconitate hydratase)
Aconitase	PF00330	312 - 450	5.8e-26	Aconitase family (aconitate hydratase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000647)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13430
fragaria_vesca	FvH4_4g04720 FvH4_4g04720 FvH4_4g04720 FvH4_4g04720 FvH4_4g04720 FvH4_5g09890
malus_domestica	MD13G1222700.v1.1 MD13G1222900.v1.1 MD16G1227200.v1.1
prunus_persica	Prupe.1G049300_v2.0.a1
pyrus_communis	pycom13g19670 pycom16g19040
rosa_chinensis	RchiOBHm_Chr4g0395521 RchiOBHm_Chr4g0395531 RchiOBHm_Chr6g0260271 RchiOBHm_Chr6g0278291
rosa_laevigata	RLG00000009126 RLG00000009614 RLG00000009616 RLG00000019332 RLG00000035454
rosa_multiflora	Rmu_co8195818.1_g000001 Rmu_co8220062.1_g000001 Rmu_sc0000041.1_g000006 Rmu_sc0000744.1_g000082 Rmu_sc0001142.1_g000007 Rmu_sc0001669.1_g000055 Rmu_sc0003400.1_g000015 Rmu_sc0005229.1_g000033 Rmu_sc0007340.1_g000006 Rmu_sc0008351.1_g000002 Rmu_sc0008351.1_g000016 Rmu_sc0039027.1_g000001
rosa_roxburghii	Rroxscaffold_4G00324270 Rroxscaffold_5G00340460 Rroxscaffold_5G00340480
rosa_rugosa	Rorug01G0023800 Rorug01G0050600 Rorug02G0280700 Rorug03G0355400 Rorug07G0181700
rosa_samantha	Rh1CG053700 Rh1DG057900 Rh3CG159300 Rh3DG159800 Rh3DG297100 Rh4AG060800 Rh4AG061300 Rh4AG061500 Rh4BG059800 Rh4BG060100 Rh4CG065500 Rh4CG065800 Rh4DG055700 Rh4DG056000 Rh5BG283600 Rh5BG284500 Rh5BG323300 Rh5BG330600 Rh5BG516600 Rh5CG076000 Rh5CG289900 Rh5DG060900 Rh5DG293300 Rh5DG293900 Rh5DG334300 Rh5DG342000 Rh6AG129800 Rh6DG223600
rosa_wichuraiana	Rw0G000910 Rw2G008950 Rw2G012250 Rw3G021630 Rw4G005010 Rw4G005020 Rw4G005030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	620, 1180
Acc36I	ACCTGC	3 cut(s)	620, 1078, 1180
AccB1I	GGYRCC	1 cut(s)	151
AccBSI	CCGCTC	1 cut(s)	169
AciI	CCGC	1 cut(s)	169
AclWI	GGATC	7 cut(s)	75, 127, 378, 507, 662, 982, 1126
AcoI	YGGCCR	1 cut(s)	349
AcuI	CTGAAG	1 cut(s)	1017
AcyI	GRCGYC	1 cut(s)	152
AfiI	CCNNNNNNNGG	4 cut(s)	439, 1115, 1121, 1187
AflIII	ACRYGT	1 cut(s)	1095
AgsI	TTSAA	3 cut(s)	337, 740, 1231
AjiI	CACGTC	1 cut(s)	1096
AjnI	CCWGG	4 cut(s)	259, 316, 577, 1114
AluBI	AGCT	6 cut(s)	626, 743, 845, 1031, 1157, 1328
AluI	AGCT	6 cut(s)	626, 743, 845, 1031, 1157, 1328
Alw26I	GTCTC	3 cut(s)	130, 1206, 1255
AlwI	GGATC	7 cut(s)	75, 127, 378, 507, 662, 982, 1126
AlwNI	CAGNNNCTG	1 cut(s)	1337
AoxI	GGCC	5 cut(s)	313, 349, 575, 1285, 1297
ApeKI	GCWGC	5 cut(s)	589, 1010, 1013, 1328, 1331
AspLEI	GCGC	1 cut(s)	154
AspS9I	GGNCC	3 cut(s)	314, 1205, 1285
AsuC2I	CCSGG	1 cut(s)	1275
AsuHPI	GGTGA	4 cut(s)	22, 275, 1308, 1348
AvaII	GGWCC	1 cut(s)	1205
BaeGI	GKGCMC	1 cut(s)	683
BaeI	ACNNNNGTAYC	2 cut(s)	795, 828
BalI	TGGCCA	1 cut(s)	351
BanI	GGYRCC	1 cut(s)	151
BanII	GRGCYC	1 cut(s)	260
BbsI	GAAGAC	1 cut(s)	1097
BbvI	GCAGC	5 cut(s)	576, 997, 1000, 1315, 1343
BccI	CCATC	3 cut(s)	31, 697, 1084
BciT130I	CCWGG	4 cut(s)	261, 318, 579, 1116
BciVI	GTATCC	1 cut(s)	436
BcnI	CCSGG	1 cut(s)	1275
BcoDI	GTCTC	3 cut(s)	130, 1206, 1255
BfaI	CTAG	4 cut(s)	231, 846, 1028, 1209
BfmI	CTRYAG	1 cut(s)	1329
BfoI	RGCGCY	1 cut(s)	155
BfuAI	ACCTGC	3 cut(s)	620, 1078, 1180
BfuI	GTATCC	1 cut(s)	436
BisI	GCNGC	5 cut(s)	590, 1011, 1014, 1329, 1332
BlsI	GCNGC	5 cut(s)	591, 1012, 1015, 1330, 1333
BmcAI	AGTACT	1 cut(s)	482
Bme1390I	CCNGG	5 cut(s)	261, 318, 579, 1116, 1275
Bme18I	GGWCC	1 cut(s)	1205
BmgBI	CACGTC	1 cut(s)	1096
BmgT120I	GGNCC	3 cut(s)	314, 1205, 1285
BmiI	GGNNCC	3 cut(s)	153, 322, 888
BmrFI	CCNGG	5 cut(s)	261, 318, 579, 1116, 1275
BmrI	ACTGGG	1 cut(s)	693
BmsI	GCATC	3 cut(s)	101, 652, 1343
BmuI	ACTGGG	1 cut(s)	693
BpiI	GAAGAC	1 cut(s)	1097
BpmI	CTGGAG	4 cut(s)	600, 642, 897, 905
Bpu10I	CCTNAGC	1 cut(s)	360
BpuEI	CTTGAG	4 cut(s)	469, 543, 683, 815
BpuMI	CCSGG	1 cut(s)	1275
BsaBI	GATNNNNATC	1 cut(s)	66
BsaHI	GRCGYC	1 cut(s)	152
BsaI	GGTCTC	1 cut(s)	130
BsaJI	CCNNGG	3 cut(s)	259, 316, 1273
BsaXI	ACNNNNNCTCC	1 cut(s)	34
Bsc4I	CCNNNNNNNGG	4 cut(s)	439, 1115, 1121, 1187
Bse118I	RCCGGY	1 cut(s)	94
Bse1I	ACTGG	7 cut(s)	190, 625, 649, 688, 888, 988, 1109
Bse3DI	GCAATG	1 cut(s)	568
Bse8I	GATNNNNATC	1 cut(s)	66
BseBI	CCWGG	4 cut(s)	261, 318, 579, 1116
BseDI	CCNNGG	3 cut(s)	259, 316, 1273
BseGI	GGATG	4 cut(s)	23, 116, 720, 1095
BseJI	GATNNNNATC	1 cut(s)	66
BseLI	CCNNNNNNNGG	4 cut(s)	439, 1115, 1121, 1187
BseMI	GCAATG	1 cut(s)	568
BseMII	CTCAG	1 cut(s)	231
BseNI	ACTGG	7 cut(s)	190, 625, 649, 688, 888, 988, 1109
BseSI	GKGCMC	1 cut(s)	683
BseXI	GCAGC	5 cut(s)	576, 997, 1000, 1315, 1343
BseYI	CCCAGC	2 cut(s)	592, 743
BsgI	GTGCAG	2 cut(s)	445, 598
BshFI	GGCC	5 cut(s)	315, 351, 577, 1287, 1299
BshNI	GGYRCC	1 cut(s)	151
BsiSI	CCGG	2 cut(s)	95, 1275
BslFI	GGGAC	2 cut(s)	749, 1164
BslI	CCNNNNNNNGG	4 cut(s)	439, 1115, 1121, 1187
BsmAI	GTCTC	3 cut(s)	130, 1206, 1255
BsmFI	GGGAC	2 cut(s)	749, 1164
BsmI	GAATGC	1 cut(s)	361
BsnI	GGCC	5 cut(s)	315, 351, 577, 1287, 1299
Bso31I	GGTCTC	1 cut(s)	130
Bsp1286I	GDGCHC	2 cut(s)	260, 683
Bsp1407I	TGTACA	2 cut(s)	828, 1098
Bsp143I	GATC	7 cut(s)	67, 119, 370, 499, 654, 974, 1118
BspACI	CCGC	1 cut(s)	169
BspANI	GGCC	5 cut(s)	315, 351, 577, 1287, 1299
BspCNI	CTCAG	1 cut(s)	232
BspLI	GGNNCC	3 cut(s)	153, 322, 888
BspMAI	CTGCAG	1 cut(s)	1333
BspMI	ACCTGC	3 cut(s)	620, 1078, 1180
BspPI	GGATC	7 cut(s)	75, 127, 378, 507, 662, 982, 1126
BspT107I	GGYRCC	1 cut(s)	151
BspTNI	GGTCTC	1 cut(s)	130
BsrBI	CCGCTC	1 cut(s)	169
BsrDI	GCAATG	1 cut(s)	568
BsrFI	RCCGGY	1 cut(s)	94
BsrGI	TGTACA	2 cut(s)	828, 1098
BsrI	ACTGG	7 cut(s)	190, 625, 649, 688, 888, 988, 1109
BssAI	RCCGGY	1 cut(s)	94
BssECI	CCNNGG	3 cut(s)	259, 316, 1273
BssMI	GATC	7 cut(s)	67, 119, 370, 499, 654, 974, 1118
BssNI	GRCGYC	1 cut(s)	152
Bst2UI	CCWGG	4 cut(s)	261, 318, 579, 1116
Bst4CI	ACNGT	6 cut(s)	16, 434, 693, 833, 923, 1103
Bst6I	CTCTTC	2 cut(s)	88, 702
BstACI	GRCGYC	1 cut(s)	152
BstAPI	GCANNNNNTGC	2 cut(s)	1134, 1337
BstAUI	TGTACA	2 cut(s)	828, 1098
BstC8I	GCNNGC	7 cut(s)	96, 177, 426, 575, 1139, 1195, 1225
BstDEI	CTNAG	2 cut(s)	240, 360
BstF5I	GGATG	4 cut(s)	23, 116, 720, 1095
BstH2I	RGCGCY	1 cut(s)	155
BstHHI	GCGC	1 cut(s)	154
BstKTI	GATC	7 cut(s)	70, 122, 373, 502, 657, 977, 1121
BstMAI	GTCTC	3 cut(s)	130, 1206, 1255
BstMBI	GATC	7 cut(s)	67, 119, 370, 499, 654, 974, 1118
BstMWI	GCNNNNNNNGC	4 cut(s)	166, 1134, 1284, 1337
BstNI	CCWGG	4 cut(s)	261, 318, 579, 1116
BstSCI	CCNGG	5 cut(s)	259, 316, 577, 1114, 1273
BstSFI	CTRYAG	1 cut(s)	1329
BstSLI	GKGCMC	1 cut(s)	683
BstV1I	GCAGC	5 cut(s)	576, 997, 1000, 1315, 1343
BstV2I	GAAGAC	1 cut(s)	1097
BstX2I	RGATCY	3 cut(s)	67, 499, 974
BstYI	RGATCY	3 cut(s)	67, 499, 974
BsuI	GTATCC	1 cut(s)	436
BsuRI	GGCC	5 cut(s)	315, 351, 577, 1287, 1299
BtgZI	GCGATG	1 cut(s)	75
BtrI	CACGTC	1 cut(s)	1096
BtsCI	GGATG	4 cut(s)	23, 116, 720, 1095
BtsIMutI	CAGTG	6 cut(s)	12, 618, 657, 681, 838, 1116
BveI	ACCTGC	3 cut(s)	620, 1078, 1180
Cac8I	GCNNGC	7 cut(s)	96, 177, 426, 575, 1139, 1195, 1225
CaiI	CAGNNNCTG	1 cut(s)	1337
CfoI	GCGC	1 cut(s)	154
Cfr10I	RCCGGY	1 cut(s)	94
Cfr13I	GGNCC	3 cut(s)	314, 1205, 1285
CspCI	CAANNNNNGTGG	2 cut(s)	1045, 1080
CviAII	CATG	4 cut(s)	148, 302, 730, 1198
DdeI	CTNAG	2 cut(s)	240, 360
DinI	GGCGCC	1 cut(s)	153
DpnI	GATC	7 cut(s)	69, 121, 372, 501, 656, 976, 1120
DpnII	GATC	7 cut(s)	67, 119, 370, 499, 654, 974, 1118
EaeI	YGGCCR	1 cut(s)	349
Eam1104I	CTCTTC	2 cut(s)	88, 702
EarI	CTCTTC	2 cut(s)	88, 702
Eco147I	AGGCCT	1 cut(s)	577
Eco24I	GRGCYC	1 cut(s)	260
Eco31I	GGTCTC	1 cut(s)	130
Eco32I	GATATC	2 cut(s)	493, 874
Eco47I	GGWCC	1 cut(s)	1205
Eco57I	CTGAAG	1 cut(s)	1017
EcoRII	CCWGG	4 cut(s)	259, 316, 577, 1114
EcoRV	GATATC	2 cut(s)	493, 874
EcoT38I	GRGCYC	1 cut(s)	260
EgeI	GGCGCC	1 cut(s)	153
EheI	GGCGCC	1 cut(s)	153
FaeI	CATG	4 cut(s)	151, 305, 733, 1201
FaqI	GGGAC	2 cut(s)	749, 1164
FatI	CATG	4 cut(s)	147, 301, 729, 1197
Fnu4HI	GCNGC	5 cut(s)	590, 1011, 1014, 1329, 1332
FokI	GGATG	4 cut(s)	10, 123, 727, 1102
FriOI	GRGCYC	1 cut(s)	260
Fsp4HI	GCNGC	5 cut(s)	590, 1011, 1014, 1329, 1332
FspBI	CTAG	4 cut(s)	231, 846, 1028, 1209
GlaI	GCGC	1 cut(s)	153
GluI	GCNGC	5 cut(s)	590, 1011, 1014, 1329, 1332
GsaI	CCCAGC	2 cut(s)	596, 747
GsuI	CTGGAG	4 cut(s)	600, 642, 897, 905
HaeII	RGCGCY	1 cut(s)	155
HaeIII	GGCC	5 cut(s)	315, 351, 577, 1287, 1299
HapII	CCGG	2 cut(s)	95, 1275
HhaI	GCGC	1 cut(s)	154
Hin1I	GRCGYC	1 cut(s)	152
Hin1II	CATG	4 cut(s)	151, 305, 733, 1201
Hin6I	GCGC	1 cut(s)	152
HinP1I	GCGC	1 cut(s)	152
HincII	GTYRAC	1 cut(s)	280
HindII	GTYRAC	1 cut(s)	280
HinfI	GANTC	4 cut(s)	330, 602, 648, 963
HpaI	GTTAAC	1 cut(s)	280
HpaII	CCGG	2 cut(s)	95, 1275
HphI	GGTGA	4 cut(s)	22, 275, 1308, 1348
Hpy166II	GTNNAC	3 cut(s)	280, 829, 1099
Hpy188I	TCNGA	3 cut(s)	166, 241, 294
Hpy188III	TCNNGA	8 cut(s)	196, 337, 374, 560, 652, 700, 914, 1035
Hpy8I	GTNNAC	3 cut(s)	280, 829, 1099
HpyAV	CCTTC	6 cut(s)	37, 46, 52, 557, 1036, 1289
HpyCH4III	ACNGT	6 cut(s)	16, 434, 693, 833, 923, 1103
HpyCH4IV	ACGT	2 cut(s)	806, 1095
HpyF10VI	GCNNNNNNNGC	4 cut(s)	166, 1134, 1284, 1337
HpyF3I	CTNAG	2 cut(s)	240, 360
HpySE526I	ACGT	2 cut(s)	806, 1095
Hsp92I	GRCGYC	1 cut(s)	152
Hsp92II	CATG	4 cut(s)	151, 305, 733, 1201
HspAI	GCGC	1 cut(s)	152
KasI	GGCGCC	1 cut(s)	151
KroI	GCCGGC	1 cut(s)	94
KroNI	GCCGGC	1 cut(s)	96
KspAI	GTTAAC	1 cut(s)	280
Kzo9I	GATC	7 cut(s)	67, 119, 370, 499, 654, 974, 1118
LmnI	GCTCC	5 cut(s)	25, 166, 466, 623, 886
Lsp1109I	GCAGC	5 cut(s)	576, 997, 1000, 1315, 1343
LweI	GCATC	3 cut(s)	101, 652, 1343
MaeI	CTAG	4 cut(s)	231, 846, 1028, 1209
MaeII	ACGT	2 cut(s)	806, 1095
MaeIII	GTNAC	4 cut(s)	263, 506, 1163, 1354
MalI	GATC	7 cut(s)	69, 121, 372, 501, 656, 976, 1120
MbiI	CCGCTC	1 cut(s)	169
MboI	GATC	7 cut(s)	67, 119, 370, 499, 654, 974, 1118
MboII	GAAGA	4 cut(s)	75, 325, 719, 1097
MflI	RGATCY	3 cut(s)	67, 499, 974
MhlI	GDGCHC	2 cut(s)	260, 683
MlsI	TGGCCA	1 cut(s)	351
MluCI	AATT	2 cut(s)	635, 954
MluNI	TGGCCA	1 cut(s)	351
Mly113I	GGCGCC	1 cut(s)	152
MlyI	GAGTC	1 cut(s)	972
MnlI	CCTC	8 cut(s)	43, 444, 577, 705, 790, 915, 991, 1144
Mox20I	TGGCCA	1 cut(s)	351
MroNI	GCCGGC	1 cut(s)	94
MscI	TGGCCA	1 cut(s)	351
MseI	TTAA	2 cut(s)	279, 1381
MslI	CAYNNNNRTG	1 cut(s)	1243
Msp20I	TGGCCA	1 cut(s)	351
MspA1I	CMGCKG	1 cut(s)	1328
MspI	CCGG	2 cut(s)	95, 1275
MspR9I	CCNGG	5 cut(s)	261, 318, 579, 1116, 1275
Mva1269I	GAATGC	1 cut(s)	361
MvaI	CCWGG	4 cut(s)	261, 318, 579, 1116
MwoI	GCNNNNNNNGC	4 cut(s)	166, 1134, 1284, 1337
NaeI	GCCGGC	1 cut(s)	96
NarI	GGCGCC	1 cut(s)	152
NciI	CCSGG	1 cut(s)	1275
NdeII	GATC	7 cut(s)	67, 119, 370, 499, 654, 974, 1118
NgoMIV	GCCGGC	1 cut(s)	94
NlaIII	CATG	4 cut(s)	151, 305, 733, 1201
NlaIV	GGNNCC	3 cut(s)	153, 322, 888
NmuCI	GTSAC	3 cut(s)	263, 1163, 1354
PaqCI	CACCTGC	2 cut(s)	620, 1180
PceI	AGGCCT	1 cut(s)	577
PcsI	WCGNNNNNNNCGW	1 cut(s)	206
PctI	GAATGC	1 cut(s)	361
PdiI	GCCGGC	1 cut(s)	96
PfeI	GAWTC	3 cut(s)	330, 602, 648
PflFI	GACNNNGTC	1 cut(s)	962
PkrI	GCNGC	5 cut(s)	591, 1012, 1015, 1330, 1333
PleI	GAGTC	1 cut(s)	971
PluTI	GGCGCC	1 cut(s)	155
PpsI	GAGTC	1 cut(s)	971
Psp6I	CCWGG	4 cut(s)	259, 316, 577, 1114
PspFI	CCCAGC	2 cut(s)	592, 743
PspGI	CCWGG	4 cut(s)	259, 316, 577, 1114
PspN4I	GGNNCC	3 cut(s)	153, 322, 888
PspPI	GGNCC	3 cut(s)	314, 1205, 1285
PsrI	GAACNNNNNNTAC	2 cut(s)	464, 496
PstI	CTGCAG	1 cut(s)	1333
PstNI	CAGNNNCTG	1 cut(s)	1337
PsuI	RGATCY	3 cut(s)	67, 499, 974
PsyI	GACNNNGTC	1 cut(s)	962
PvuII	CAGCTG	1 cut(s)	1328
RseI	CAYNNNNRTG	1 cut(s)	1243
SaqAI	TTAA	2 cut(s)	279, 1381
SatI	GCNGC	5 cut(s)	590, 1011, 1014, 1329, 1332
Sau3AI	GATC	7 cut(s)	67, 119, 370, 499, 654, 974, 1118
Sau96I	GGNCC	3 cut(s)	314, 1205, 1285
ScaI	AGTACT	1 cut(s)	482
SchI	GAGTC	1 cut(s)	972
ScrFI	CCNGG	5 cut(s)	261, 318, 579, 1116, 1275
SduI	GDGCHC	2 cut(s)	260, 683
SfaNI	GCATC	3 cut(s)	101, 652, 1343
SfcI	CTRYAG	1 cut(s)	1329
SfoI	GGCGCC	1 cut(s)	153
SinI	GGWCC	1 cut(s)	1205
SmiMI	CAYNNNNRTG	1 cut(s)	1243
SmlI	CTYRAG	4 cut(s)	448, 558, 698, 794
SmoI	CTYRAG	4 cut(s)	448, 558, 698, 794
Sse9I	AATT	2 cut(s)	635, 954
SseBI	AGGCCT	1 cut(s)	577
SsiI	CCGC	1 cut(s)	169
SspDI	GGCGCC	1 cut(s)	151
SspI	AATATT	1 cut(s)	225
SspMI	CTAG	4 cut(s)	231, 846, 1028, 1209
StuI	AGGCCT	1 cut(s)	577
StyD4I	CCNGG	5 cut(s)	259, 316, 577, 1114, 1273
TaaI	ACNGT	6 cut(s)	16, 434, 693, 833, 923, 1103
TaiI	ACGT	2 cut(s)	809, 1098
TaqI	TCGA	1 cut(s)	373
TaqII	GACCGA	3 cut(s)	112, 181, 230
TasI	AATT	2 cut(s)	635, 954
TatI	WGTACW	5 cut(s)	480, 828, 861, 980, 1098
TfiI	GAWTC	3 cut(s)	330, 602, 648
Tru1I	TTAA	2 cut(s)	279, 1381
Tru9I	TTAA	2 cut(s)	279, 1381
TscAI	CASTG	6 cut(s)	19, 625, 664, 688, 838, 1116
TseFI	GTSAC	3 cut(s)	263, 1163, 1354
TseI	GCWGC	5 cut(s)	589, 1010, 1013, 1328, 1331
Tsp45I	GTSAC	3 cut(s)	263, 1163, 1354
TspDTI	ATGAA	4 cut(s)	28, 90, 834, 1248
TspGWI	ACGGA	1 cut(s)	479
TspRI	CASTG	6 cut(s)	19, 625, 664, 688, 838, 1116
Tth111I	GACNNNGTC	1 cut(s)	962
VpaK11BI	GGWCC	1 cut(s)	1205
XcmI	CCANNNNNNNNNTGG	2 cut(s)	61, 308
XspI	CTAG	4 cut(s)	231, 846, 1028, 1209
ZrmI	AGTACT	1 cut(s)	482

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.