3-isopropylmalate
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1321 |
| Acc36I | ACCTGC | 4 cut(s) | 644, 1219, 1321, 1372 |
| AccB1I | GGYRCC | 2 cut(s) | 691, 1252 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1262 |
| AccBSI | CCGCTC | 1 cut(s) | 157 |
| AciI | CCGC | 3 cut(s) | 157, 606, 1379 |
| AclWI | GGATC | 3 cut(s) | 495, 1123, 1267 |
| AcoI | YGGCCR | 1 cut(s) | 337 |
| AcuI | CTGAAG | 1 cut(s) | 1158 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 427, 1256, 1262, 1328 |
| AflII | CTTAAG | 1 cut(s) | 838 |
| AflIII | ACRYGT | 1 cut(s) | 1236 |
| AgeI | ACCGGT | 1 cut(s) | 1487 |
| AgsI | TTSAA | 4 cut(s) | 325, 833, 881, 1372 |
| AjiI | CACGTC | 1 cut(s) | 1237 |
| AjnI | CCWGG | 5 cut(s) | 247, 304, 565, 1255, 1414 |
| AluBI | AGCT | 6 cut(s) | 679, 806, 837, 884, 1298, 1469 |
| AluI | AGCT | 6 cut(s) | 679, 806, 837, 884, 1298, 1469 |
| Alw26I | GTCTC | 3 cut(s) | 80, 124, 1396 |
| AlwI | GGATC | 3 cut(s) | 495, 1123, 1267 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1262 |
| AoxI | GGCC | 6 cut(s) | 144, 301, 337, 563, 1426, 1438 |
| ApeKI | GCWGC | 5 cut(s) | 822, 1151, 1154, 1469, 1472 |
| AsiGI | ACCGGT | 1 cut(s) | 1487 |
| AspS9I | GGNCC | 5 cut(s) | 145, 302, 358, 1346, 1426 |
| AsuC2I | CCSGG | 1 cut(s) | 512 |
| AsuHPI | GGTGA | 5 cut(s) | 15, 263, 734, 785, 1449 |
| AvaII | GGWCC | 2 cut(s) | 358, 1346 |
| BaeGI | GKGCMC | 1 cut(s) | 671 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 586, 619, 936, 969 |
| BalI | TGGCCA | 1 cut(s) | 339 |
| BanI | GGYRCC | 2 cut(s) | 691, 1252 |
| BanII | GRGCYC | 1 cut(s) | 248 |
| BbvI | GCAGC | 5 cut(s) | 834, 1138, 1141, 1456, 1484 |
| BccI | CCATC | 3 cut(s) | 157, 713, 1225 |
| BceAI | ACGGC | 2 cut(s) | 1015, 1230 |
| BciT130I | CCWGG | 5 cut(s) | 249, 306, 567, 1257, 1416 |
| BclI | TGATCA | 1 cut(s) | 375 |
| BcnI | CCSGG | 1 cut(s) | 512 |
| BcoDI | GTCTC | 3 cut(s) | 80, 124, 1396 |
| BfaI | CTAG | 1 cut(s) | 581 |
| BfmI | CTRYAG | 2 cut(s) | 783, 1470 |
| BfrI | CTTAAG | 1 cut(s) | 838 |
| BfuAI | ACCTGC | 4 cut(s) | 644, 1219, 1321, 1372 |
| BisI | GCNGC | 5 cut(s) | 823, 1152, 1155, 1470, 1473 |
| BlsI | GCNGC | 5 cut(s) | 824, 1153, 1156, 1471, 1474 |
| BmcAI | AGTACT | 1 cut(s) | 470 |
| Bme1390I | CCNGG | 6 cut(s) | 249, 306, 512, 567, 1257, 1416 |
| Bme18I | GGWCC | 2 cut(s) | 358, 1346 |
| BmgBI | CACGTC | 1 cut(s) | 1237 |
| BmgT120I | GGNCC | 5 cut(s) | 145, 302, 358, 1346, 1426 |
| BmiI | GGNNCC | 6 cut(s) | 147, 359, 693, 1029, 1254, 1348 |
| BmrFI | CCNGG | 6 cut(s) | 249, 306, 512, 567, 1257, 1416 |
| BmrI | ACTGGG | 1 cut(s) | 1317 |
| BmsI | GCATC | 3 cut(s) | 95, 640, 1484 |
| BmuI | ACTGGG | 1 cut(s) | 1317 |
| BpmI | CTGGAG | 2 cut(s) | 588, 1038 |
| Bpu10I | CCTNAGC | 1 cut(s) | 348 |
| BpuEI | CTTGAG | 3 cut(s) | 531, 671, 956 |
| BpuMI | CCSGG | 1 cut(s) | 512 |
| BsaBI | GATNNNNATC | 1 cut(s) | 374 |
| BsaI | GGTCTC | 1 cut(s) | 80 |
| BsaJI | CCNNGG | 4 cut(s) | 247, 304, 1350, 1414 |
| BsaWI | WCCGGW | 2 cut(s) | 1249, 1487 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 427, 1256, 1262, 1328 |
| Bse118I | RCCGGY | 2 cut(s) | 788, 1487 |
| Bse1I | ACTGG | 6 cut(s) | 178, 193, 637, 676, 1129, 1323 |
| Bse3DI | GCAATG | 1 cut(s) | 556 |
| Bse8I | GATNNNNATC | 1 cut(s) | 374 |
| BseBI | CCWGG | 5 cut(s) | 249, 306, 567, 1257, 1416 |
| BseDI | CCNNGG | 4 cut(s) | 247, 304, 1350, 1414 |
| BseGI | GGATG | 3 cut(s) | 724, 861, 1236 |
| BseJI | GATNNNNATC | 1 cut(s) | 374 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 427, 1256, 1262, 1328 |
| BseMI | GCAATG | 1 cut(s) | 556 |
| BseMII | CTCAG | 3 cut(s) | 219, 695, 990 |
| BseNI | ACTGG | 6 cut(s) | 178, 193, 637, 676, 1129, 1323 |
| BseSI | GKGCMC | 1 cut(s) | 671 |
| BseXI | GCAGC | 5 cut(s) | 834, 1138, 1141, 1456, 1484 |
| BseYI | CCCAGC | 1 cut(s) | 884 |
| BsgI | GTGCAG | 1 cut(s) | 433 |
| BshFI | GGCC | 6 cut(s) | 146, 303, 339, 565, 1428, 1440 |
| BshNI | GGYRCC | 2 cut(s) | 691, 1252 |
| BshTI | ACCGGT | 1 cut(s) | 1487 |
| BsiSI | CCGG | 5 cut(s) | 512, 609, 789, 1250, 1488 |
| BslFI | GGGAC | 4 cut(s) | 371, 890, 1305, 1332 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 427, 1256, 1262, 1328 |
| BsmAI | GTCTC | 3 cut(s) | 80, 124, 1396 |
| BsmFI | GGGAC | 4 cut(s) | 371, 890, 1305, 1332 |
| BsmI | GAATGC | 2 cut(s) | 349, 1085 |
| BsnI | GGCC | 6 cut(s) | 146, 303, 339, 565, 1428, 1440 |
| Bso31I | GGTCTC | 1 cut(s) | 80 |
| Bsp1286I | GDGCHC | 2 cut(s) | 248, 671 |
| Bsp1407I | TGTACA | 2 cut(s) | 969, 1239 |
| Bsp143I | GATC | 5 cut(s) | 113, 375, 487, 1115, 1259 |
| BspACI | CCGC | 3 cut(s) | 157, 606, 1379 |
| BspANI | GGCC | 6 cut(s) | 146, 303, 339, 565, 1428, 1440 |
| BspCNI | CTCAG | 3 cut(s) | 220, 696, 991 |
| BspLI | GGNNCC | 6 cut(s) | 147, 359, 693, 1029, 1254, 1348 |
| BspMAI | CTGCAG | 1 cut(s) | 1474 |
| BspMI | ACCTGC | 4 cut(s) | 644, 1219, 1321, 1372 |
| BspPI | GGATC | 3 cut(s) | 495, 1123, 1267 |
| BspT107I | GGYRCC | 2 cut(s) | 691, 1252 |
| BspTI | CTTAAG | 1 cut(s) | 838 |
| BspTNI | GGTCTC | 1 cut(s) | 80 |
| BsrBI | CCGCTC | 1 cut(s) | 157 |
| BsrDI | GCAATG | 1 cut(s) | 556 |
| BsrFI | RCCGGY | 2 cut(s) | 788, 1487 |
| BsrGI | TGTACA | 2 cut(s) | 969, 1239 |
| BsrI | ACTGG | 6 cut(s) | 178, 193, 637, 676, 1129, 1323 |
| BssAI | RCCGGY | 2 cut(s) | 788, 1487 |
| BssECI | CCNNGG | 4 cut(s) | 247, 304, 1350, 1414 |
| BssMI | GATC | 5 cut(s) | 113, 375, 487, 1115, 1259 |
| BssT1I | CCWWGG | 1 cut(s) | 1350 |
| Bst2UI | CCWGG | 5 cut(s) | 249, 306, 567, 1257, 1416 |
| Bst4CI | ACNGT | 4 cut(s) | 422, 829, 957, 1064 |
| Bst6I | CTCTTC | 1 cut(s) | 843 |
| BstAFI | CTTAAG | 1 cut(s) | 838 |
| BstAUI | TGTACA | 2 cut(s) | 969, 1239 |
| BstC8I | GCNNGC | 7 cut(s) | 165, 414, 563, 677, 744, 1336, 1366 |
| BstDEI | CTNAG | 5 cut(s) | 60, 228, 348, 704, 999 |
| BstF5I | GGATG | 3 cut(s) | 724, 861, 1236 |
| BstKTI | GATC | 5 cut(s) | 116, 378, 490, 1118, 1262 |
| BstMAI | GTCTC | 3 cut(s) | 80, 124, 1396 |
| BstMBI | GATC | 5 cut(s) | 113, 375, 487, 1115, 1259 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1425, 1478 |
| BstNI | CCWGG | 5 cut(s) | 249, 306, 567, 1257, 1416 |
| BstSCI | CCNGG | 6 cut(s) | 247, 304, 510, 565, 1255, 1414 |
| BstSFI | CTRYAG | 2 cut(s) | 783, 1470 |
| BstSLI | GKGCMC | 1 cut(s) | 671 |
| BstV1I | GCAGC | 5 cut(s) | 834, 1138, 1141, 1456, 1484 |
| BstX2I | RGATCY | 3 cut(s) | 487, 1115, 1259 |
| BstYI | RGATCY | 3 cut(s) | 487, 1115, 1259 |
| BsuRI | GGCC | 6 cut(s) | 146, 303, 339, 565, 1428, 1440 |
| BtgZI | GCGATG | 2 cut(s) | 118, 990 |
| BtrI | CACGTC | 1 cut(s) | 1237 |
| BtsCI | GGATG | 3 cut(s) | 724, 861, 1236 |
| BtsIMutI | CAGTG | 3 cut(s) | 645, 669, 825 |
| BveI | ACCTGC | 4 cut(s) | 644, 1219, 1321, 1372 |
| Cac8I | GCNNGC | 7 cut(s) | 165, 414, 563, 677, 744, 1336, 1366 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1262 |
| Cfr10I | RCCGGY | 2 cut(s) | 788, 1487 |
| Cfr13I | GGNCC | 5 cut(s) | 145, 302, 358, 1346, 1426 |
| CspAI | ACCGGT | 1 cut(s) | 1487 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1186, 1221 |
| CviAII | CATG | 4 cut(s) | 142, 290, 533, 871 |
| DdeI | CTNAG | 5 cut(s) | 60, 228, 348, 704, 999 |
| DpnI | GATC | 5 cut(s) | 115, 377, 489, 1117, 1261 |
| DpnII | GATC | 5 cut(s) | 113, 375, 487, 1115, 1259 |
| EaeI | YGGCCR | 1 cut(s) | 337 |
| Eam1104I | CTCTTC | 1 cut(s) | 843 |
| EarI | CTCTTC | 1 cut(s) | 843 |
| Eco130I | CCWWGG | 1 cut(s) | 1350 |
| Eco147I | AGGCCT | 1 cut(s) | 565 |
| Eco24I | GRGCYC | 1 cut(s) | 248 |
| Eco31I | GGTCTC | 1 cut(s) | 80 |
| Eco32I | GATATC | 2 cut(s) | 481, 1015 |
| Eco47I | GGWCC | 2 cut(s) | 358, 1346 |
| Eco57I | CTGAAG | 1 cut(s) | 1158 |
| EcoRII | CCWGG | 5 cut(s) | 247, 304, 565, 1255, 1414 |
| EcoRV | GATATC | 2 cut(s) | 481, 1015 |
| EcoT14I | CCWWGG | 1 cut(s) | 1350 |
| EcoT38I | GRGCYC | 1 cut(s) | 248 |
| ErhI | CCWWGG | 1 cut(s) | 1350 |
| FaeI | CATG | 4 cut(s) | 145, 293, 536, 874 |
| FaqI | GGGAC | 4 cut(s) | 371, 890, 1305, 1332 |
| FatI | CATG | 4 cut(s) | 141, 289, 532, 870 |
| FauNDI | CATATG | 1 cut(s) | 1360 |
| FbaI | TGATCA | 1 cut(s) | 375 |
| Fnu4HI | GCNGC | 5 cut(s) | 823, 1152, 1155, 1470, 1473 |
| FokI | GGATG | 3 cut(s) | 731, 868, 1243 |
| FriOI | GRGCYC | 1 cut(s) | 248 |
| Fsp4HI | GCNGC | 5 cut(s) | 823, 1152, 1155, 1470, 1473 |
| FspBI | CTAG | 1 cut(s) | 581 |
| GluI | GCNGC | 5 cut(s) | 823, 1152, 1155, 1470, 1473 |
| GsaI | CCCAGC | 1 cut(s) | 888 |
| GsuI | CTGGAG | 2 cut(s) | 588, 1038 |
| HaeIII | GGCC | 6 cut(s) | 146, 303, 339, 565, 1428, 1440 |
| HapII | CCGG | 5 cut(s) | 512, 609, 789, 1250, 1488 |
| Hin1II | CATG | 4 cut(s) | 145, 293, 536, 874 |
| HincII | GTYRAC | 1 cut(s) | 268 |
| HindII | GTYRAC | 1 cut(s) | 268 |
| HindIII | AAGCTT | 2 cut(s) | 677, 835 |
| HinfI | GANTC | 4 cut(s) | 318, 590, 636, 708 |
| HpaI | GTTAAC | 1 cut(s) | 268 |
| HpaII | CCGG | 5 cut(s) | 512, 609, 789, 1250, 1488 |
| HphI | GGTGA | 5 cut(s) | 15, 263, 734, 785, 1449 |
| Hpy166II | GTNNAC | 3 cut(s) | 268, 970, 1240 |
| Hpy188I | TCNGA | 3 cut(s) | 154, 229, 705 |
| Hpy188III | TCNNGA | 5 cut(s) | 184, 325, 548, 640, 1055 |
| Hpy8I | GTNNAC | 3 cut(s) | 268, 970, 1240 |
| HpyAV | CCTTC | 5 cut(s) | 46, 58, 545, 1177, 1430 |
| HpyCH4III | ACNGT | 4 cut(s) | 422, 829, 957, 1064 |
| HpyCH4IV | ACGT | 2 cut(s) | 947, 1236 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1425, 1478 |
| HpyF3I | CTNAG | 5 cut(s) | 60, 228, 348, 704, 999 |
| HpySE526I | ACGT | 2 cut(s) | 947, 1236 |
| Hsp92II | CATG | 4 cut(s) | 145, 293, 536, 874 |
| Ksp22I | TGATCA | 1 cut(s) | 375 |
| KspAI | GTTAAC | 1 cut(s) | 268 |
| Kzo9I | GATC | 5 cut(s) | 113, 375, 487, 1115, 1259 |
| LmnI | GCTCC | 5 cut(s) | 140, 154, 454, 611, 1027 |
| Lsp1109I | GCAGC | 5 cut(s) | 834, 1138, 1141, 1456, 1484 |
| LweI | GCATC | 3 cut(s) | 95, 640, 1484 |
| MaeI | CTAG | 1 cut(s) | 581 |
| MaeII | ACGT | 2 cut(s) | 947, 1236 |
| MaeIII | GTNAC | 3 cut(s) | 251, 1304, 1495 |
| MalI | GATC | 5 cut(s) | 115, 377, 489, 1117, 1261 |
| MbiI | CCGCTC | 1 cut(s) | 157 |
| MboI | GATC | 5 cut(s) | 113, 375, 487, 1115, 1259 |
| MboII | GAAGA | 4 cut(s) | 81, 220, 313, 860 |
| MflI | RGATCY | 3 cut(s) | 487, 1115, 1259 |
| MhlI | GDGCHC | 2 cut(s) | 248, 671 |
| MlsI | TGGCCA | 1 cut(s) | 339 |
| MluCI | AATT | 5 cut(s) | 623, 756, 765, 1022, 1095 |
| MluNI | TGGCCA | 1 cut(s) | 339 |
| MmeI | TCCRAC | 1 cut(s) | 722 |
| Mox20I | TGGCCA | 1 cut(s) | 339 |
| MscI | TGGCCA | 1 cut(s) | 339 |
| MseI | TTAA | 5 cut(s) | 267, 465, 501, 755, 839 |
| Msp20I | TGGCCA | 1 cut(s) | 339 |
| MspA1I | CMGCKG | 1 cut(s) | 1469 |
| MspCI | CTTAAG | 1 cut(s) | 838 |
| MspI | CCGG | 5 cut(s) | 512, 609, 789, 1250, 1488 |
| MspR9I | CCNGG | 6 cut(s) | 249, 306, 512, 567, 1257, 1416 |
| Mva1269I | GAATGC | 2 cut(s) | 349, 1085 |
| MvaI | CCWGG | 5 cut(s) | 249, 306, 567, 1257, 1416 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1425, 1478 |
| NciI | CCSGG | 1 cut(s) | 512 |
| NdeI | CATATG | 1 cut(s) | 1360 |
| NdeII | GATC | 5 cut(s) | 113, 375, 487, 1115, 1259 |
| NlaIII | CATG | 4 cut(s) | 145, 293, 536, 874 |
| NlaIV | GGNNCC | 6 cut(s) | 147, 359, 693, 1029, 1254, 1348 |
| NmuCI | GTSAC | 3 cut(s) | 251, 1304, 1495 |
| PaqCI | CACCTGC | 1 cut(s) | 1321 |
| PceI | AGGCCT | 1 cut(s) | 565 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 953 |
| PctI | GAATGC | 2 cut(s) | 349, 1085 |
| PfeI | GAWTC | 4 cut(s) | 318, 590, 636, 708 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1262 |
| PinAI | ACCGGT | 1 cut(s) | 1487 |
| PkrI | GCNGC | 5 cut(s) | 824, 1153, 1156, 1471, 1474 |
| Psp6I | CCWGG | 5 cut(s) | 247, 304, 565, 1255, 1414 |
| PspFI | CCCAGC | 1 cut(s) | 884 |
| PspGI | CCWGG | 5 cut(s) | 247, 304, 565, 1255, 1414 |
| PspN4I | GGNNCC | 6 cut(s) | 147, 359, 693, 1029, 1254, 1348 |
| PspPI | GGNCC | 5 cut(s) | 145, 302, 358, 1346, 1426 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 452, 484 |
| PstI | CTGCAG | 1 cut(s) | 1474 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1262 |
| PsuI | RGATCY | 3 cut(s) | 487, 1115, 1259 |
| PvuII | CAGCTG | 1 cut(s) | 1469 |
| SaqAI | TTAA | 5 cut(s) | 267, 465, 501, 755, 839 |
| SatI | GCNGC | 5 cut(s) | 823, 1152, 1155, 1470, 1473 |
| Sau3AI | GATC | 5 cut(s) | 113, 375, 487, 1115, 1259 |
| Sau96I | GGNCC | 5 cut(s) | 145, 302, 358, 1346, 1426 |
| ScaI | AGTACT | 1 cut(s) | 470 |
| ScrFI | CCNGG | 6 cut(s) | 249, 306, 512, 567, 1257, 1416 |
| SduI | GDGCHC | 2 cut(s) | 248, 671 |
| SfaNI | GCATC | 3 cut(s) | 95, 640, 1484 |
| SfcI | CTRYAG | 2 cut(s) | 783, 1470 |
| SinI | GGWCC | 2 cut(s) | 358, 1346 |
| SmlI | CTYRAG | 4 cut(s) | 546, 686, 838, 935 |
| SmoI | CTYRAG | 4 cut(s) | 546, 686, 838, 935 |
| Sse9I | AATT | 5 cut(s) | 623, 756, 765, 1022, 1095 |
| SseBI | AGGCCT | 1 cut(s) | 565 |
| SsiI | CCGC | 3 cut(s) | 157, 606, 1379 |
| SspMI | CTAG | 1 cut(s) | 581 |
| StuI | AGGCCT | 1 cut(s) | 565 |
| StyD4I | CCNGG | 6 cut(s) | 247, 304, 510, 565, 1255, 1414 |
| StyI | CCWWGG | 1 cut(s) | 1350 |
| TaaI | ACNGT | 4 cut(s) | 422, 829, 957, 1064 |
| TaiI | ACGT | 2 cut(s) | 950, 1239 |
| TaqII | GACCGA | 4 cut(s) | 169, 218, 375, 1514 |
| TasI | AATT | 5 cut(s) | 623, 756, 765, 1022, 1095 |
| TatI | WGTACW | 5 cut(s) | 468, 969, 1002, 1121, 1239 |
| TfiI | GAWTC | 4 cut(s) | 318, 590, 636, 708 |
| Tru1I | TTAA | 5 cut(s) | 267, 465, 501, 755, 839 |
| Tru9I | TTAA | 5 cut(s) | 267, 465, 501, 755, 839 |
| TscAI | CASTG | 3 cut(s) | 652, 676, 832 |
| TseFI | GTSAC | 3 cut(s) | 251, 1304, 1495 |
| TseI | GCWGC | 5 cut(s) | 822, 1151, 1154, 1469, 1472 |
| Tsp45I | GTSAC | 3 cut(s) | 251, 1304, 1495 |
| TspDTI | ATGAA | 2 cut(s) | 975, 1389 |
| TspGWI | ACGGA | 2 cut(s) | 127, 467 |
| TspRI | CASTG | 3 cut(s) | 652, 676, 832 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1262 |
| Vha464I | CTTAAG | 1 cut(s) | 838 |
| VpaK11BI | GGWCC | 2 cut(s) | 358, 1346 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 245, 296 |
| XspI | CTAG | 1 cut(s) | 581 |
| ZrmI | AGTACT | 1 cut(s) | 470 |