Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000647

Physical Location & Seq

Genomic Coordinates Reverse (-)

8251595 .. 8254219

Gene Structure 2625 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0050600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGGTTGAATTGTTTAGATTCATTAAACCAACACCAAATAGTCACCAATTAAATTCTATGGACAGCTCTGGCTCTCCACACGGGCATCATCATGACGAAGATATTGAGGAAAACATCATCAGCCAACAAAATCCTTCGAAAGGAGGCTGGACTGCTGCCATCTTCATCATCTTTGTCGAAATGGCAGAGAGATTTGCTTACTATGGTATGTCTGGTAACCTCATCACCTACCTCACAAACGAACTCGAGGAACCAATTCCTATGGCTGCCAAAAACGTCAACACTTGGACTGGTGTCTCGGCTCTCTTACCTCTTCTCGGAGCCTTCATAGCCGATTCCTTTCTCGGTCGATTCACCACCATCCTTGTCTCCTCCATTATTTACTGCATGGGAATGAGTTTGTTGACCGTAACAGTTTCGGTTGTTCCACTGCATTTGCGCAAAGCAATGTTCTTTGTGGCACTTTACATATTGTCAGTTGGGCTAGCCGGGCACAAACCATGTGTGCAGACGTTTGCGGCGGACCAGTTTTCTGAGGACTCGCCAGAGGAAAGAAAGGCAAAAAGCTCCTTCTTCAACTGGTGGTACCTGGGGATTATTGTTGCTGGCTCTGCTGCCATATTGGTAGTCATATATATCCAGGACAATGTAAGCTGGGCGGCAGGATTTGGAATAATGACAGGTTCCATGGTGGTGGCACTAATTTTATTTCTGTTGGGAATCAAGAAATACCGAAAGCAAGGACCCCTAGGCAGTCCCTTCCCCAAGGTGGCTCAGGTCTTTGTCGCAGCCGTCAGGAAGCGGCACACCGAGGTCACTACCGGTGACAGTTCGGGTGTGTACTTCAGAGATGACACAAGTCCGCAACAGCCACTTTCTTCCGTACATACCAACCAATTCAGATTTTTGGACAAGGCAATGGTCATTGACCACTTGGATGCTTCAAGCGAGACCAGAAATCCTTGGAGACTATGTTCACTAAATCAAGTGGAACAAGTAAAGCTCCTCCTACGCCTCATTCCCATATGGATGTGCTGCTTAATGTTTGCTGTAGTCCAGTCATTTGTGCAGACCTTCTTCACCAAACAAGGAAGCACAATGATCCGGTCAATAGGTTCATTTCAGATTCCCCAAGCTTCCCTCCTAATCTTCGTTGGTCTCACCATCATAGTTGTCATTCCAATCTACGACCGTGTTTTTGTCCCAACTGCCCGAAAATTCACCGGACATCCCTCAGGTATTACCATGCTACAAAGAATTGGCACTGGCCTATTAATATCAATAATCACTATGGTTGTTGCAGCTGTGGTAGAAGCCAAAAGGGTAAAGATTTTAGGAGATCACAACCTCCTGGACAATCCGAAAGCAATTGTTCCAATGAGAGTGTGGTGGTTAGTTCCTCAGTATGTGATATCTGGTTTGTCTGATGTATTTGCGTTTGTTGGAATCCAAGAGTTGTTCTATGATCAAATGCCGGAGGCAATGAGAAGCTTGGGAGCAGCATTTTACCTCAGCGTCACCGGAGTTGGAAACTTCATAAGCAGTGGGATAATAACGTTGGTTCAAGTAATTAGCTCTAAGTATGGTGAAAAATGGATTAGTGACAATATCGATCGCGCACACCTCGATTACTTTTACTGGGTAATTGCAGCTCTGAGCACATTGAATTTGTGCATTTACGTGTGGATTGCTAAAGGATTTCTATACAAAAAAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005777 GO:0006725 GO:0006778 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008482 GO:0009987 GO:0010035 GO:0010477 GO:0015994 GO:0016491 GO:0016667 GO:0016670 GO:0033013 GO:0042221 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051186 GO:0055114 GO:0071704 GO:1901360 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00920 ko01100 ko01120 map00920 map01100 map01120

Pfam Domains

Protein Families

Mo-co_dimer Oxidored_molyb

Protein Analysis

572

Amino Acids

63.67

Weight (kDa)

8.7

Isoelectric Point (pI)

33.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	77 - 514	5.5e-12	Major Facilitator Superfamily
PTR2	PF00854	118 - 528	8.3e-91	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000647)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13430
fragaria_vesca	FvH4_4g04720 FvH4_4g04720 FvH4_4g04720 FvH4_4g04720 FvH4_4g04720 FvH4_5g09890
malus_domestica	MD13G1222700.v1.1 MD13G1222900.v1.1 MD16G1227200.v1.1
prunus_persica	Prupe.1G049300_v2.0.a1
pyrus_communis	pycom13g19670 pycom16g19040
rosa_chinensis	RchiOBHm_Chr4g0395521 RchiOBHm_Chr4g0395531 RchiOBHm_Chr6g0260271 RchiOBHm_Chr6g0278291
rosa_laevigata	RLG00000009126 RLG00000009614 RLG00000009616 RLG00000019332 RLG00000035454
rosa_multiflora	Rmu_co8195818.1_g000001 Rmu_co8220062.1_g000001 Rmu_sc0000041.1_g000006 Rmu_sc0000744.1_g000082 Rmu_sc0001142.1_g000007 Rmu_sc0001669.1_g000055 Rmu_sc0003400.1_g000015 Rmu_sc0005229.1_g000033 Rmu_sc0007340.1_g000006 Rmu_sc0008351.1_g000002 Rmu_sc0008351.1_g000016 Rmu_sc0039027.1_g000001
rosa_roxburghii	Rroxscaffold_4G00324270 Rroxscaffold_5G00340460 Rroxscaffold_5G00340480
rosa_rugosa	Rorug01G0023800 Rorug01G0050600 Rorug02G0280700 Rorug03G0355400 Rorug07G0181700
rosa_samantha	Rh1CG053700 Rh1DG057900 Rh3CG159300 Rh3DG159800 Rh3DG297100 Rh4AG060800 Rh4AG061300 Rh4AG061500 Rh4BG059800 Rh4BG060100 Rh4CG065500 Rh4CG065800 Rh4DG055700 Rh4DG056000 Rh5BG283600 Rh5BG284500 Rh5BG323300 Rh5BG330600 Rh5BG516600 Rh5CG076000 Rh5CG289900 Rh5DG060900 Rh5DG293300 Rh5DG293900 Rh5DG334300 Rh5DG342000 Rh6AG129800 Rh6DG223600
rosa_wichuraiana	Rw0G000910 Rw2G008950 Rw2G012250 Rw3G021630 Rw4G005010 Rw4G005020 Rw4G005030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	440
Acc65I	GGTACC	1 cut(s)	585
AccB1I	GGYRCC	1 cut(s)	585
AccII	CGCG	1 cut(s)	1617
AciI	CCGC	5 cut(s)	518, 521, 659, 802, 863
AclI	AACGTT	1 cut(s)	1556
AclWI	GGATC	1 cut(s)	1096
AcsI	RAATTY	3 cut(s)	52, 1217, 1666
AcuI	CTGAAG	1 cut(s)	829
AfaI	GTAC	3 cut(s)	587, 842, 885
AfiI	CCNNNNNNNGG	3 cut(s)	140, 317, 769
AflIII	ACRYGT	1 cut(s)	1680
AgeI	ACCGGT	1 cut(s)	821
AgsI	TTSAA	5 cut(s)	8, 577, 945, 1565, 1666
AjnI	CCWGG	3 cut(s)	588, 639, 1350
AloI	GAACNNNNNNTCC	2 cut(s)	958, 990
AluBI	AGCT	9 cut(s)	66, 567, 654, 1003, 1136, 1304, 1491, 1575, 1652
AluI	AGCT	9 cut(s)	66, 567, 654, 1003, 1136, 1304, 1491, 1575, 1652
Alw21I	GWGCWC	1 cut(s)	1661
Alw26I	GTCTC	5 cut(s)	301, 373, 944, 961, 1163
AlwI	GGATC	1 cut(s)	1096
Ama87I	CYCGRG	1 cut(s)	245
AoxI	GGCC	1 cut(s)	1267
ApeKI	GCWGC	8 cut(s)	155, 266, 614, 788, 1035, 1301, 1499, 1649
ApoI	RAATTY	3 cut(s)	52, 1217, 1666
ArsI	GACNNNNNNTTYG	2 cut(s)	1181, 1213
AseI	ATTAAT	1 cut(s)	1274
AsiGI	ACCGGT	1 cut(s)	821
Asp700I	GAANNNNTTC	1 cut(s)	255
Asp718I	GGTACC	1 cut(s)	585
AspA2I	CCTAGG	1 cut(s)	748
AspLEI	GCGC	2 cut(s)	441, 1619
AspS9I	GGNCC	2 cut(s)	523, 743
AsuC2I	CCSGG	1 cut(s)	490
AsuHPI	GGTGA	9 cut(s)	35, 217, 346, 836, 1072, 1153, 1213, 1510, 1598
AsuII	TTCGAA	1 cut(s)	137
AsuNHI	GCTAGC	1 cut(s)	484
AvaI	CYCGRG	1 cut(s)	245
AvaII	GGWCC	2 cut(s)	523, 743
AvrII	CCTAGG	1 cut(s)	748
AxyI	CCTNAGG	1 cut(s)	1234
BaeGI	GKGCMC	1 cut(s)	495
BanI	GGYRCC	1 cut(s)	585
Bbv12I	GWGCWC	1 cut(s)	1661
BbvCI	CCTCAGC	1 cut(s)	1511
BbvI	GCAGC	8 cut(s)	142, 253, 601, 800, 1022, 1313, 1511, 1661
BccI	CCATC	3 cut(s)	167, 368, 1172
BceAI	ACGGC	1 cut(s)	776
BciT130I	CCWGG	3 cut(s)	590, 641, 1352
BclI	TGATCA	1 cut(s)	1465
BcnI	CCSGG	1 cut(s)	490
BcoDI	GTCTC	5 cut(s)	301, 373, 944, 961, 1163
BfaI	CTAG	2 cut(s)	485, 749
BfmI	CTRYAG	1 cut(s)	1050
BlnI	CCTAGG	1 cut(s)	748
Bme1390I	CCNGG	4 cut(s)	490, 590, 641, 1352
Bme18I	GGWCC	2 cut(s)	523, 743
BmeT110I	CYCGRG	1 cut(s)	245
BmgT120I	GGNCC	2 cut(s)	523, 743
BmiI	GGNNCC	5 cut(s)	252, 322, 587, 685, 745
BmrFI	CCNGG	4 cut(s)	490, 590, 641, 1352
BmrI	ACTGGG	1 cut(s)	1648
BmsI	GCATC	2 cut(s)	94, 928
BmtI	GCTAGC	1 cut(s)	488
BmuI	ACTGGG	1 cut(s)	1648
BoxI	GACNNNNGTC	2 cut(s)	293, 858
Bpu10I	CCTNAGC	2 cut(s)	774, 1511
Bpu14I	TTCGAA	1 cut(s)	137
BpuMI	CCSGG	1 cut(s)	490
Bsa29I	ATCGAT	1 cut(s)	1611
BsaAI	YACGTR	1 cut(s)	1681
BsaI	GGTCTC	2 cut(s)	944, 1163
BsaJI	CCNNGG	6 cut(s)	589, 687, 748, 765, 810, 962
BsaWI	WCCGGW	4 cut(s)	821, 1104, 1223, 1520
BsaXI	ACNNNNNCTCC	2 cut(s)	958, 988
Bsc4I	CCNNNNNNNGG	3 cut(s)	140, 317, 769
Bse118I	RCCGGY	1 cut(s)	821
Bse1I	ACTGG	6 cut(s)	295, 526, 584, 1057, 1270, 1643
Bse21I	CCTNAGG	1 cut(s)	1234
Bse3DI	GCAATG	3 cut(s)	453, 924, 1488
BseBI	CCWGG	3 cut(s)	590, 641, 1352
BseCI	ATCGAT	1 cut(s)	1611
BseDI	CCNNGG	6 cut(s)	589, 687, 748, 765, 810, 962
BseGI	GGATG	4 cut(s)	360, 943, 1035, 1228
BseLI	CCNNNNNNNGG	3 cut(s)	140, 317, 769
BseMI	GCAATG	3 cut(s)	453, 924, 1488
BseMII	CTCAG	6 cut(s)	525, 788, 1248, 1415, 1525, 1646
BseNI	ACTGG	6 cut(s)	295, 526, 584, 1057, 1270, 1643
BseRI	GAGGAG	2 cut(s)	361, 995
BseSI	GKGCMC	1 cut(s)	495
BseXI	GCAGC	8 cut(s)	142, 253, 601, 800, 1022, 1313, 1511, 1661
BseYI	CCCAGC	1 cut(s)	654
BsgI	GTGCAG	2 cut(s)	527, 1088
Bsh1236I	CGCG	1 cut(s)	1617
Bsh1285I	CGRYCG	3 cut(s)	349, 1192, 1615
BshFI	GGCC	1 cut(s)	1269
BshNI	GGYRCC	1 cut(s)	585
BshTI	ACCGGT	1 cut(s)	821
BshVI	ATCGAT	1 cut(s)	1611
BsiEI	CGRYCG	3 cut(s)	349, 1192, 1615
BsiHKAI	GWGCWC	1 cut(s)	1661
BsiHKCI	CYCGRG	1 cut(s)	245
BsiSI	CCGG	6 cut(s)	489, 822, 1105, 1224, 1475, 1521
BslFI	GGGAC	2 cut(s)	741, 1187
BslI	CCNNNNNNNGG	3 cut(s)	140, 317, 769
BsmAI	GTCTC	5 cut(s)	301, 373, 944, 961, 1163
BsmFI	GGGAC	2 cut(s)	741, 1187
BsnI	GGCC	1 cut(s)	1269
Bso31I	GGTCTC	2 cut(s)	944, 1163
BsoBI	CYCGRG	1 cut(s)	245
Bsp119I	TTCGAA	1 cut(s)	137
Bsp1286I	GDGCHC	2 cut(s)	495, 1661
Bsp143I	GATC	4 cut(s)	1101, 1339, 1465, 1612
Bsp19I	CCATGG	1 cut(s)	687
BspACI	CCGC	5 cut(s)	518, 521, 659, 802, 863
BspANI	GGCC	1 cut(s)	1269
BspCNI	CTCAG	6 cut(s)	526, 787, 1247, 1414, 1524, 1647
BspDI	ATCGAT	1 cut(s)	1611
BspFNI	CGCG	1 cut(s)	1617
BspHI	TCATGA	1 cut(s)	91
BspLI	GGNNCC	5 cut(s)	252, 322, 587, 685, 745
BspOI	GCTAGC	1 cut(s)	488
BspPI	GGATC	1 cut(s)	1096
BspT104I	TTCGAA	1 cut(s)	137
BspT107I	GGYRCC	1 cut(s)	585
BspTNI	GGTCTC	2 cut(s)	944, 1163
BsrDI	GCAATG	3 cut(s)	453, 924, 1488
BsrFI	RCCGGY	1 cut(s)	821
BsrI	ACTGG	6 cut(s)	295, 526, 584, 1057, 1270, 1643
BssAI	RCCGGY	1 cut(s)	821
BssECI	CCNNGG	6 cut(s)	589, 687, 748, 765, 810, 962
BssMI	GATC	4 cut(s)	1101, 1339, 1465, 1612
BssT1I	CCWWGG	4 cut(s)	687, 748, 765, 962
Bst2UI	CCWGG	3 cut(s)	590, 641, 1352
Bst4CI	ACNGT	4 cut(s)	409, 415, 830, 1193
Bst6I	CTCTTC	1 cut(s)	318
BstBAI	YACGTR	1 cut(s)	1681
BstBI	TTCGAA	1 cut(s)	137
BstC8I	GCNNGC	2 cut(s)	486, 607
BstDEI	CTNAG	7 cut(s)	534, 774, 1234, 1401, 1511, 1578, 1655
BstDSI	CCRYGG	1 cut(s)	687
BstEII	GGTNACC	1 cut(s)	215
BstENI	CCTNNNNNAGG	1 cut(s)	138
BstF5I	GGATG	4 cut(s)	360, 943, 1035, 1228
BstFNI	CGCG	1 cut(s)	1617
BstHHI	GCGC	2 cut(s)	441, 1619
BstKTI	GATC	4 cut(s)	1104, 1342, 1468, 1615
BstMAI	GTCTC	5 cut(s)	301, 373, 944, 961, 1163
BstMBI	GATC	4 cut(s)	1101, 1339, 1465, 1612
BstMCI	CGRYCG	3 cut(s)	349, 1192, 1615
BstMWI	GCNNNNNNNGC	3 cut(s)	329, 490, 611
BstNI	CCWGG	3 cut(s)	590, 641, 1352
BstPAI	GACNNNNGTC	2 cut(s)	293, 858
BstPI	GGTNACC	1 cut(s)	215
BstSCI	CCNGG	4 cut(s)	488, 588, 639, 1350
BstSFI	CTRYAG	1 cut(s)	1050
BstSLI	GKGCMC	1 cut(s)	495
BstUI	CGCG	1 cut(s)	1617
BstV1I	GCAGC	8 cut(s)	142, 253, 601, 800, 1022, 1313, 1511, 1661
BstXI	CCANNNNNNTGG	1 cut(s)	694
Bsu15I	ATCGAT	1 cut(s)	1611
Bsu36I	CCTNAGG	1 cut(s)	1234
BsuRI	GGCC	1 cut(s)	1269
BsuTUI	ATCGAT	1 cut(s)	1611
BtgI	CCRYGG	1 cut(s)	687
BtsCI	GGATG	4 cut(s)	360, 943, 1035, 1228
BtsI	GCAGTG	2 cut(s)	428, 1549
BtsIMutI	CAGTG	3 cut(s)	428, 1263, 1549
Cac8I	GCNNGC	2 cut(s)	486, 607
CciI	TCATGA	1 cut(s)	91
CfoI	GCGC	2 cut(s)	441, 1619
Cfr10I	RCCGGY	1 cut(s)	821
Cfr13I	GGNCC	2 cut(s)	523, 743
ClaI	ATCGAT	1 cut(s)	1611
CseI	GACGC	1 cut(s)	1504
Csp6I	GTAC	3 cut(s)	586, 841, 884
CspAI	ACCGGT	1 cut(s)	821
CspCI	CAANNNNNGTGG	4 cut(s)	346, 381, 417, 452
CviAII	CATG	5 cut(s)	92, 388, 501, 688, 1246
CviQI	GTAC	3 cut(s)	586, 841, 884
DdeI	CTNAG	7 cut(s)	534, 774, 1234, 1401, 1511, 1578, 1655
DpnI	GATC	4 cut(s)	1103, 1341, 1467, 1614
DpnII	GATC	4 cut(s)	1101, 1339, 1465, 1612
Eam1104I	CTCTTC	1 cut(s)	318
EarI	CTCTTC	1 cut(s)	318
EciI	GGCGGA	1 cut(s)	536
Eco130I	CCWWGG	4 cut(s)	687, 748, 765, 962
Eco31I	GGTCTC	2 cut(s)	944, 1163
Eco32I	GATATC	1 cut(s)	1413
Eco47I	GGWCC	2 cut(s)	523, 743
Eco57I	CTGAAG	1 cut(s)	829
Eco81I	CCTNAGG	1 cut(s)	1234
Eco88I	CYCGRG	1 cut(s)	245
Eco91I	GGTNACC	1 cut(s)	215
EcoNI	CCTNNNNNAGG	1 cut(s)	138
EcoO109I	RGGNCCY	1 cut(s)	743
EcoO65I	GGTNACC	1 cut(s)	215
EcoRII	CCWGG	3 cut(s)	588, 639, 1350
EcoRV	GATATC	1 cut(s)	1413
EcoT14I	CCWWGG	4 cut(s)	687, 748, 765, 962
ErhI	CCWWGG	4 cut(s)	687, 748, 765, 962
FaeI	CATG	5 cut(s)	95, 391, 504, 691, 1249
FaqI	GGGAC	2 cut(s)	741, 1187
FatI	CATG	5 cut(s)	91, 387, 500, 687, 1245
FauNDI	CATATG	1 cut(s)	1025
FbaI	TGATCA	1 cut(s)	1465
FokI	GGATG	4 cut(s)	347, 950, 1042, 1215
FspBI	CTAG	2 cut(s)	485, 749
FspI	TGCGCA	1 cut(s)	440
GlaI	GCGC	2 cut(s)	440, 1618
GsaI	CCCAGC	1 cut(s)	658
HaeIII	GGCC	1 cut(s)	1269
HapII	CCGG	6 cut(s)	489, 822, 1105, 1224, 1475, 1521
HgaI	GACGC	1 cut(s)	1504
HhaI	GCGC	2 cut(s)	441, 1619
Hin1II	CATG	5 cut(s)	95, 391, 504, 691, 1249
Hin6I	GCGC	2 cut(s)	439, 1617
HinP1I	GCGC	2 cut(s)	439, 1617
HincII	GTYRAC	2 cut(s)	280, 405
HindII	GTYRAC	2 cut(s)	280, 405
HindIII	AAGCTT	2 cut(s)	1134, 1489
HinfI	GANTC	7 cut(s)	18, 335, 351, 539, 720, 1126, 1446
HpaII	CCGG	6 cut(s)	489, 822, 1105, 1224, 1475, 1521
HphI	GGTGA	9 cut(s)	35, 217, 346, 836, 1072, 1153, 1213, 1510, 1598
Hpy166II	GTNNAC	4 cut(s)	280, 405, 841, 977
Hpy188I	TCNGA	8 cut(s)	320, 535, 848, 902, 1125, 1362, 1426, 1656
Hpy188III	TCNNGA	3 cut(s)	92, 724, 796
Hpy8I	GTNNAC	4 cut(s)	280, 405, 841, 977
HpyAV	CCTTC	5 cut(s)	144, 334, 580, 769, 1084
HpyCH4III	ACNGT	4 cut(s)	409, 415, 830, 1193
HpyCH4IV	ACGT	4 cut(s)	276, 512, 1556, 1680
HpyCH4V	TGCA	7 cut(s)	387, 433, 508, 1069, 1301, 1649, 1674
HpyF10VI	GCNNNNNNNGC	3 cut(s)	329, 490, 611
HpyF3I	CTNAG	7 cut(s)	534, 774, 1234, 1401, 1511, 1578, 1655
HpySE526I	ACGT	4 cut(s)	276, 512, 1556, 1680
Hsp92II	CATG	5 cut(s)	95, 391, 504, 691, 1249
HspAI	GCGC	2 cut(s)	439, 1617
KpnI	GGTACC	1 cut(s)	589
Ksp22I	TGATCA	1 cut(s)	1465
Kzo9I	GATC	4 cut(s)	1101, 1339, 1465, 1612
LmnI	GCTCC	4 cut(s)	320, 572, 1008, 1496
Lsp1109I	GCAGC	8 cut(s)	142, 253, 601, 800, 1022, 1313, 1511, 1661
LweI	GCATC	2 cut(s)	94, 928
MaeI	CTAG	2 cut(s)	485, 749
MaeII	ACGT	4 cut(s)	276, 512, 1556, 1680
MaeIII	GTNAC	7 cut(s)	41, 215, 409, 814, 824, 1516, 1601
MalI	GATC	4 cut(s)	1103, 1341, 1467, 1614
MboI	GATC	4 cut(s)	1101, 1339, 1465, 1612
MboII	GAAGA	7 cut(s)	110, 154, 305, 565, 870, 1069, 1141
MfeI	CAATTG	1 cut(s)	1368
MhlI	GDGCHC	2 cut(s)	495, 1661
MlyI	GAGTC	1 cut(s)	533
MmeI	TCCRAC	2 cut(s)	1423, 1507
MroXI	GAANNNNTTC	1 cut(s)	255
MseI	TTAA	4 cut(s)	24, 50, 1040, 1274
MslI	CAYNNNNRTG	6 cut(s)	90, 392, 692, 936, 1028, 1679
MspA1I	CMGCKG	1 cut(s)	1304
MspI	CCGG	6 cut(s)	489, 822, 1105, 1224, 1475, 1521
MspR9I	CCNGG	4 cut(s)	490, 590, 641, 1352
MunI	CAATTG	1 cut(s)	1368
MvaI	CCWGG	3 cut(s)	590, 641, 1352
MvnI	CGCG	1 cut(s)	1617
MwoI	GCNNNNNNNGC	3 cut(s)	329, 490, 611
NciI	CCSGG	1 cut(s)	490
NcoI	CCATGG	1 cut(s)	687
NdeI	CATATG	1 cut(s)	1025
NdeII	GATC	4 cut(s)	1101, 1339, 1465, 1612
NheI	GCTAGC	1 cut(s)	484
NlaIII	CATG	5 cut(s)	95, 391, 504, 691, 1249
NlaIV	GGNNCC	5 cut(s)	252, 322, 587, 685, 745
NmeAIII	GCCGAG	1 cut(s)	278
NmuCI	GTSAC	5 cut(s)	41, 814, 824, 1516, 1601
NsbI	TGCGCA	1 cut(s)	440
NspV	TTCGAA	1 cut(s)	137
PaeR7I	CTCGAG	1 cut(s)	245
PagI	TCATGA	1 cut(s)	91
PdmI	GAANNNNTTC	1 cut(s)	255
PfeI	GAWTC	6 cut(s)	18, 335, 351, 720, 1126, 1446
PfoI	TCCNGGA	2 cut(s)	639, 1350
PinAI	ACCGGT	1 cut(s)	821
Ple19I	CGATCG	1 cut(s)	1615
PleI	GAGTC	1 cut(s)	533
PpsI	GAGTC	1 cut(s)	533
Ppu21I	YACGTR	1 cut(s)	1681
PpuMI	RGGWCCY	1 cut(s)	743
PshAI	GACNNNNGTC	2 cut(s)	293, 858
PshBI	ATTAAT	1 cut(s)	1274
Psp1406I	AACGTT	1 cut(s)	1556
Psp5II	RGGWCCY	1 cut(s)	743
Psp6I	CCWGG	3 cut(s)	588, 639, 1350
PspEI	GGTNACC	1 cut(s)	215
PspFI	CCCAGC	1 cut(s)	654
PspGI	CCWGG	3 cut(s)	588, 639, 1350
PspN4I	GGNNCC	5 cut(s)	252, 322, 587, 685, 745
PspPI	GGNCC	2 cut(s)	523, 743
PspPPI	RGGWCCY	1 cut(s)	743
PspXI	VCTCGAGB	1 cut(s)	245
PvuI	CGATCG	1 cut(s)	1615
PvuII	CAGCTG	1 cut(s)	1304
RsaI	GTAC	3 cut(s)	587, 842, 885
RsaNI	GTAC	3 cut(s)	586, 841, 884
RseI	CAYNNNNRTG	6 cut(s)	90, 392, 692, 936, 1028, 1679
SaqAI	TTAA	4 cut(s)	24, 50, 1040, 1274
Sau3AI	GATC	4 cut(s)	1101, 1339, 1465, 1612
Sau96I	GGNCC	2 cut(s)	523, 743
SchI	GAGTC	1 cut(s)	533
ScrFI	CCNGG	4 cut(s)	490, 590, 641, 1352
SduI	GDGCHC	2 cut(s)	495, 1661
SfaNI	GCATC	2 cut(s)	94, 928
SfcI	CTRYAG	1 cut(s)	1050
Sfr274I	CTCGAG	1 cut(s)	245
SfuI	TTCGAA	1 cut(s)	137
SinI	GGWCC	2 cut(s)	523, 743
SlaI	CTCGAG	1 cut(s)	245
SmiMI	CAYNNNNRTG	6 cut(s)	90, 392, 692, 936, 1028, 1679
SmlI	CTYRAG	1 cut(s)	245
SmoI	CTYRAG	1 cut(s)	245
SsiI	CCGC	5 cut(s)	518, 521, 659, 802, 863
SspMI	CTAG	2 cut(s)	485, 749
StyD4I	CCNGG	4 cut(s)	488, 588, 639, 1350
StyI	CCWWGG	4 cut(s)	687, 748, 765, 962
TaaI	ACNGT	4 cut(s)	409, 415, 830, 1193
TaiI	ACGT	4 cut(s)	279, 515, 1559, 1683
TaqI	TCGA	6 cut(s)	137, 177, 246, 349, 1611, 1626
TaqII	GACCGA	1 cut(s)	335
TatI	WGTACW	1 cut(s)	840
TauI	GCSGC	3 cut(s)	521, 662, 805
TfiI	GAWTC	6 cut(s)	18, 335, 351, 720, 1126, 1446
Tru1I	TTAA	4 cut(s)	24, 50, 1040, 1274
Tru9I	TTAA	4 cut(s)	24, 50, 1040, 1274
TscAI	CASTG	3 cut(s)	435, 1270, 1549
TseFI	GTSAC	5 cut(s)	41, 814, 824, 1516, 1601
TseI	GCWGC	8 cut(s)	155, 266, 614, 788, 1035, 1301, 1499, 1649
Tsp45I	GTSAC	5 cut(s)	41, 814, 824, 1516, 1601
TspDTI	ATGAA	5 cut(s)	10, 154, 316, 1107, 1525
TspGWI	ACGGA	1 cut(s)	871
TspRI	CASTG	3 cut(s)	435, 1270, 1549
VpaK11BI	GGWCC	2 cut(s)	523, 743
VspI	ATTAAT	1 cut(s)	1274
XagI	CCTNNNNNAGG	1 cut(s)	138
XapI	RAATTY	3 cut(s)	52, 1217, 1666
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1383
XhoI	CTCGAG	1 cut(s)	245
XmaJI	CCTAGG	1 cut(s)	748
XmnI	GAANNNNTTC	1 cut(s)	255
XspI	CTAG	2 cut(s)	485, 749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.