AT4G15215
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
8671349 .. 8679176
7828 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15215.5

Sequence Viewer

Length: 4173 bp
ATGGCTCAAACAGGTGAAGATGTTGACAAGGCAAAGTCCTTCCAAGTTGAGTTTGCTTGTGGAAATGGTGTTGATGATGAGGAGAAGCTTCGGTCGCAGTGGGCAACAGTTGAGAGATTACCAACTTTTAAAAGGGTTACTACTGCTTTGTTACACACAGGAGATGACTCGTCAGATATTATTGATGTTACTAAACTTGAGGATGCTGAGAGACGGTTGTTGATTGAAAAGCTCGTCAAACAAATCGAAGCTGATAACCTCCGTTTACTCAGGAAAATAAGAAAGAGAATCGACGAAGTTGGTATAGAGTTACCAACGGTGGAAGTGAGGTTCAATGACCTCTCTGTTGAAGCGGAATGCCAAGTAGTTCATGGAAAGCCTATCCCAACTCTTTGGAATACTATCAAGGGCTCACTATCTAAGTTCGTTTGTTCAAAGAAAGAAACCAAGATAGGCATCTTGAAAGGAGTGAGTGGAATTGTAAGGCCTGGAAGAATGACATTGTTGCTTGGTCCTCCTGGTTGTGGTAAAACCACTCTTCTACAAGCACTTTCTGGAAGACTTTCCCATTCTGTAAAGGTTGGAGGAAAAGTAAGTTATAATGGTTGCTTACTTTCAGAGTTTATTCCAGAAAAAACGTCAAGTTATATCAGTCAAAATGATCTACACATTCCAGAGCTGAGTGTGAGAGAGACTCTCGACTTCTCTGCGTGTTGCCAAGGCATAGGAAGCCGTATGGAAATTATGAAAGAGATCAGTAGAAGGGAGAAACTAAAAGAAATTGTTCCAGATCCTGATATAGATGCTTACATGAAGGCAATATCTGTTGAAGGTTTGAAAAACAGTATGCAAACTGACTATATTCTAAAGATCCTGGGACTCGATATCTGTGCAGATACACGAGCAGGAGATGCCACAAGACCTGGAATATCTGGTGGCCAAAAGAGGAGGTTGACAACAGCTACTACTCTGTTAATGGATGAAATATCGAATGGTTTGGACAGCTCAACTACGTTCCAGATAGTGTCGTGCCTCCAACAGTTGGCACATATAGCTGGAGCCACCATACTGATTTCACTTCTTCAGCCTGCACCAGAAACATTTGAGCTTTTTGACGATGTGATTCTTTTGGGGGAAGGAAAGATAATTTACCATGCTCCAAGAGCTGATATCTGTAAATTCTTTGAAGGTTGTGGATTTAAATGTCCAGAGAGAAAAGGCGTTGCTGACTTCCTCCAGGAGGTTATGTCTAGAAAAGATCAAGAACAATATTGGTGCCACAGAAGCAAGCCCTACAGTTATATATCTGTTGATTCATTCATTAAGAAGTTTAACGAATCAAATCTTGGGTTTTTGCTGAAAGAAGAACTGTCAAAGCCGTTTGATAAATCCCAGACTCGCAAGGATAGTCTATGTTTTAGAAAATACTCACTCAGTAAATGGGAGATGCTTAAAGCTTGCTCAAGGAGAGAAATTCTTTTGATGAAACGGAATTCTTTCATTTACTTGTTCAAATCTGGACTGTTAGTGTTCAATGCGTTAGTCACAATGACCGTTTTTCTACAAGCTGGAGCTACGAGGGATGCTCGTCATGGGAATTATCTTATGGGTTCTATGTTCACTGCTCTCTTTAGACTTCTTGCCGATGGGCTTCCAGAACTCACTTTGACTATCTCCAGATTGGGAGTGTTCTGCAAACAGAAAGATTTATACTTCTATCCTGCTTGGGCATATGCAATTCCTTCGATTATCTTAAGGATACCTCTTTCGGTTCTTGATTCATTTATTTGGACAGTACTGACATATTATGTCATTGGTTACAGTCCCGAAGTCGGAAGGTTCTTCCGGCACTTCATTATCTTACTTACATTCCACCTTTCATGTATATCAATGTTTCGCGCTATAGCGTCAATCTGTCGCACATTTGTTGCTTGCTCAATTACTGGAGCTATTTCGGTATTGCTTCTCGCATTGTTTGGAGGCTTTGTGATTCCAAAATCATCCATGCCTACTTGGCTGGGTTGGGGATTCTGGCTTTCTCCCTTGTCATATGCTGAGATTGGTTTAACCGCAAATGAATTTTTCTCTCCACGGTGGAGAAAGTTAACCTCTGGCAACATTACAGCCGGGGAACAAGTGTTAGATGTCCGTGGATTGAATTTTGGTAGGCACTCTTACTGGACAGCTTTTGGTGCTTTAGTTGGGTTTGTCTTGTTCTTCAATGCCCTCTACACGTTGGCCCTGACATATCGGAATAATCCACAAAGATCCCGTGCTATTGTCTCGCATGGGAAGAACTCTCAGTGCTCAGAAGAAGATTTTAAACCCTGTCCTGAAATCACATCGCGAGCTAAAACAGGAAAAGTTATCTTGCCTTTTAAGCCACTCACTGTCACATTTCAAAACGTCCAGTATTATATTGAGACTCCTCAGGGGAAGACACGGCAACTTCTCTTTGATATTACAGGCGCGTTGAAGCCCGGTGTTCTCACATCTCTGATGGGTGTCAGTGGAGCAGGGAAAACGACTCTTCTTGATGTCCTTTCTGGAAGGAAAACCCGCGGTATCATCAAAGGAGAGATCAGAGTAGGCGGGTATCCTAAGGTTCAAGAAACATTTGCACGAGTATCAGGTTACTGTGAACAGTTTGATATTCATTCCCCTAATATAACTGTGGAAGAGTCTTTGAAATATTCTGCTTGGCTTCGACTCCCCTATAACATCGATGCAAAGACCAAGAACGAACTCGTCAAAGAAGTCCTCGAGACAGTTGAGCTTGAGGATATCAAAGATTCCATGGTGGGACTTCCTGGAATAAGTGGTTTATCTACAGAACAACGCAAAAGGCTGACAATAGCCGTGGAACTTGTTTCTAACCCTTCCATCATATTTCTGGATGAACCTACAACAGGGCTGGATGCAAGAGCCGCAGCCATTGTTATGAGAGCTGTGAAAAATGTTGCTGAGACTGGGAGAACAGTTGTTTGCACGATCCACCAGCCTAGCATAGATATCTTTGAGACATTTGATGAGCTGATCCTGATGAAAGATGGGGGACAGCTTGTCTACTATGGTCCTCTTGGAAAACATTCAAGTAAGGTTATCAAATACTTTGAGAGCATCCCTGGAGTTCCAAAAGTCCAAAAGAATTGTAATCCAGCCACTTGGATGTTAGATATTACTTGTAAATCTGCAGAGCACAGACTTGGAATGGATTTTGCACAAGCATACAAGGATTCAACTCTGTACAAGGAGAACAAAATGGTGGTTGAACAACTGAGTTCTGCGTCTCTGGGATCAGAAGCTCTGAGCTTTCCTTCACGTTATTCACAAACAGGTTGGGGGCAACTAAAGGCTTGCCTTTGGAAACAACATTGCTCGTATTGGAGAAACCCTTCACATAATCTCACTCGCATAGTCTTCATATTACTCAATTCTCTGTTATGTAGCCTTCTCTTCTGGCAAAAAGCTAAGGACATAAATAATCAGCAAGATCTTTTTAGCATATTTGGCTCAATGTACACTATAGTAATCTTCTCGGGAATAAACAACTGTGCGACAGTTATGAACTTCATTGCAACCGAGCGCAATGTTTTCTACCGTGAAAGGTTTGCGCGGATGTACTCCTCATGGGCGTATTCATTTTCTCAGGTCCTAGTTGAGGTTCCATACTCACTACTCCAGTCTCTACTATGTACGATCATTGTATATCCTATGATCGGCTACCATATGTCTGTTTACAAGATGTTTTGGAGCTTGTACAGCATCTTCTGCTCGTTGCTTATCTTCAACTACTGTGGGATGCTTATGGTTGCTTTGACGCCAAACATTCACATGGCATTGACTTTGCGCTCAACTTTTTTCTCCATGGTGAATCTGTTTGCTGGCTTTGTCATGCCAAAACAGAAAATCCCAAAATGGTGGATATGGATGTACTACCTGAGCCCTACATCGTGGGTGTTGGAAGGATTACTGAGTTCGCAGTATGGAGATGTCGAGAAAGAGATAACAGTATTTGGAGAGAAGAAGAGTGTTTCAGCTTTCTTGGAGGATTACTTCGGCTACAAACATGACTCCTTGGCTGTTGTAGCGTTTGTCCTCATTGCTTTTCCTATCATCGTTGCTTCTCTTTTTGCCTTCTTCATGAGCAAACTCAATTTTCAAAAGAAATAG

Protein Analysis

1390

Amino Acids

156.59

Weight (kDa)

8.94

Isoelectric Point (pI)

39.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 151 - 333 8.4e-17 ABC transporter
ABC2_membrane PF01061 488 - 698 3.3e-42 ABC-2 type transporter
PDR_assoc PF08370 703 - 765 3.6e-20 Plant PDR ABC transporter associated
ABC_tran PF00005 824 - 974 2.7e-21 ABC transporter
ABC2_membrane_7 PF19055 1003 - 1064 2.6e-06 ABC-2 type transporter
ABC2_membrane PF01061 1120 - 1333 1.5e-56 ABC-2 type transporter
ABC2_membrane_3 PF12698 1166 - 1382 3e-07 ABC-2 family transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15230 AT4G15230 AT4G15230 AT4G15230 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15236
fragaria_vesca FvH4_4g21360 FvH4_4g21360 FvH4_4g21390 FvH4_6g49431 FvH4_6g49450
malus_domestica MD09G1044300.v1.1 MD16G1137900.v1.1 MD16G1138000.v1.1
prunus_persica Prupe.1G106800_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.3G273300_v2.0.a1
pyrus_communis pycom111g03460 pycom16g12210
rosa_chinensis RchiOBHm_Chr2g0169331 RchiOBHm_Chr2g0169361 RchiOBHm_Chr2g0169371 RchiOBHm_Chr2g0169381 RchiOBHm_Chr2g0169411 RchiOBHm_Chr4g0427141 RchiOBHm_Chr4g0427321
rosa_laevigata RLG00000007252 RLG00000007258 RLG00000013974 RLG00000021856 RLG00000021857 RLG00000021858 RLG00000021859
rosa_multiflora Rmu_sc0000648.1_g000007 Rmu_sc0000648.1_g000009 Rmu_sc0003813.1_g000016 Rmu_sc0009165.1_g000008 Rmu_sc0022554.1_g000001
rosa_roxburghii Rroxscaffold_2G00082200 Rroxscaffold_2G00082230 Rroxscaffold_5G00368960 Rroxscaffold_5G00369010 Rroxscaffold_7G00200390
rosa_rugosa Rorug02G0539500 Rorug02G0539600 Rorug02G0539700 Rorug04G0216400 Rorug04G0216500 Rorug04G0216500 Rorug04G0216600
rosa_samantha Rh2AG610800 Rh2AG611000 Rh2AG611100 Rh2CG592800 Rh2CG593000 Rh2CG593200 Rh2DG634900 Rh2DG635100 Rh2DG635200 Rh2DG635400 Rh4AG272200 Rh4AG272900 Rh4DG275600 Rh4DG276000
rosa_wichuraiana Rw2G050640 Rw2G050660 Rw2G050670 Rw2G050680 Rw4G023610 Rw4G023680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 600
AccB1I GGYRCC 1 cut(s) 1275
AccB7I CCANNNNNTGG 1 cut(s) 1042
AccI GTMKAC 1 cut(s) 3066
AccII CGCG 5 cut(s) 1899, 2347, 2471, 2562, 3616
AciI CCGC 7 cut(s) 353, 2070, 2560, 2562, 2592, 2928, 3616
AclWI GGATC 6 cut(s) 785, 865, 2262, 2986, 3031, 3304
AcoI YGGCCR 1 cut(s) 937
AcsI RAATTY 5 cut(s) 1178, 1473, 1492, 2078, 2158
AcuI CTGAAG 1 cut(s) 1067
AcyI GRCGYC 1 cut(s) 3821
AfaI GTAC 7 cut(s) 1797, 3248, 3521, 3623, 3697, 3761, 3935
AfiI CCNNNNNNNGG 7 cut(s) 524, 1042, 1240, 1832, 2909, 3661, 3719
AflII CTTAAG 1 cut(s) 1753
AflIII ACRYGT 1 cut(s) 2232
AhdI GACNNNNNGTC 1 cut(s) 3062
AjnI CCWGG 7 cut(s) 487, 517, 873, 922, 1236, 2809, 3124
AjuI GAANNNNNNNTTGG 2 cut(s) 1329, 1361
AloI GAACNNNNNNTCC 2 cut(s) 314, 346
Alw21I GWGCWC 2 cut(s) 2309, 3201
Alw26I GTCTC 9 cut(s) 205, 686, 2287, 2417, 2759, 2960, 3014, 3294, 3690
AlwI GGATC 6 cut(s) 785, 865, 2262, 2986, 3031, 3304
AlwNI CAGNNNCTG 1 cut(s) 794
Ama87I CYCGRG 2 cut(s) 2762, 3538
AoxI GGCC 3 cut(s) 485, 937, 2238
ApeKI GCWGC 1 cut(s) 2930
ApoI RAATTY 5 cut(s) 1178, 1473, 1492, 2078, 2158
Asp700I GAANNNNTTC 5 cut(s) 562, 783, 1496, 3088, 3394
AspLEI GCGC 5 cut(s) 1901, 2471, 3588, 3616, 3852
AspS9I GGNCC 4 cut(s) 512, 2239, 3074, 3652
AsuC2I CCSGG 2 cut(s) 2128, 2481
AsuHPI GGTGA 2 cut(s) 26, 3883
AvaI CYCGRG 2 cut(s) 2762, 3538
AvaII GGWCC 3 cut(s) 512, 3074, 3652
AxyI CCTNAGG 2 cut(s) 2430, 2601
BalI TGGCCA 1 cut(s) 939
BanI GGYRCC 1 cut(s) 1275
BanII GRGCYC 2 cut(s) 413, 3947
BarI GAAGNNNNNNTAC 2 cut(s) 3752, 3784
BauI CACGAG 2 cut(s) 900, 2622
BbsI GAAGAC 3 cut(s) 565, 2444, 3412
Bbv12I GWGCWC 2 cut(s) 2309, 3201
BbvI GCAGC 1 cut(s) 2942
BccI CCATC 4 cut(s) 1640, 2494, 2891, 3044
BceAI ACGGC 4 cut(s) 717, 1363, 2459, 2843
BcgI CGANNNNNNTGC 6 cut(s) 689, 723, 872, 906, 1725, 1759
BciT130I CCWGG 7 cut(s) 489, 519, 875, 924, 1238, 2811, 3126
BciVI GTATCC 2 cut(s) 1752, 2607
BcnI CCSGG 2 cut(s) 2128, 2481
BcoDI GTCTC 9 cut(s) 205, 686, 2287, 2417, 2759, 2960, 3014, 3294, 3690
BfaI CTAG 3 cut(s) 1251, 3003, 3656
BfmI CTRYAG 5 cut(s) 1294, 1902, 2829, 3192, 3525
BfrI CTTAAG 1 cut(s) 1753
BfuI GTATCC 2 cut(s) 1752, 2607
BglI GCCNNNNNGGC 1 cut(s) 2014
BglII AGATCT 1 cut(s) 3493
BisI GCNGC 2 cut(s) 2928, 2931
BlsI GCNGC 2 cut(s) 2929, 2932
BmcAI AGTACT 1 cut(s) 1797
Bme1390I CCNGG 9 cut(s) 489, 519, 875, 924, 1238, 2128, 2481, 2811, 3126
Bme18I GGWCC 3 cut(s) 512, 3074, 3652
BmeRI GACNNNNNGTC 1 cut(s) 3062
BmeT110I CYCGRG 2 cut(s) 2762, 3538
BmgT120I GGNCC 4 cut(s) 512, 2239, 3074, 3652
BmiI GGNNCC 3 cut(s) 1060, 1277, 3666
BmrFI CCNGG 9 cut(s) 489, 519, 875, 924, 1238, 2128, 2481, 2811, 3126
BmrI ACTGGG 1 cut(s) 2979
BmuI ACTGGG 1 cut(s) 2979
BpiI GAAGAC 3 cut(s) 565, 2444, 3412
BplI GAGNNNNNCTC 6 cut(s) 679, 711, 681, 713, 1570, 1602
BpmI CTGGAG 7 cut(s) 1077, 1220, 1590, 1660, 1965, 3147, 3665
Bpu10I CCTNAGC 2 cut(s) 3471, 3941
BpuEI CTTGAG 3 cut(s) 218, 1447, 2798
BpuMI CCSGG 2 cut(s) 2128, 2481
Bsa29I ATCGAT 1 cut(s) 2724
BsaBI GATNNNNATC 1 cut(s) 455
BsaHI GRCGYC 1 cut(s) 3821
BsaXI ACNNNNNCTCC 6 cut(s) 576, 606, 1232, 1262, 1971, 2001
Bsc4I CCNNNNNNNGG 7 cut(s) 524, 1042, 1240, 1832, 2909, 3661, 3719
Bse1I ACTGG 5 cut(s) 1948, 2183, 2410, 2974, 3682
Bse21I CCTNAGG 2 cut(s) 2430, 2601
Bse3DI GCAATG 4 cut(s) 3373, 3573, 3595, 4101
Bse8I GATNNNNATC 1 cut(s) 455
BseBI CCWGG 7 cut(s) 489, 519, 875, 924, 1238, 2811, 3126
BseCI ATCGAT 1 cut(s) 2724
BseJI GATNNNNATC 1 cut(s) 455
BseLI CCNNNNNNNGG 7 cut(s) 524, 1042, 1240, 1832, 2909, 3661, 3719
BseMI GCAATG 4 cut(s) 3373, 3573, 3595, 4101
BseNI ACTGG 5 cut(s) 1948, 2183, 2410, 2974, 3682
BseRI GAGGAG 4 cut(s) 95, 961, 2418, 3616
BseXI GCAGC 1 cut(s) 2942
BseYI CCCAGC 1 cut(s) 2017
BsgI GTGCAG 2 cut(s) 912, 1074
Bsh1236I CGCG 5 cut(s) 1899, 2347, 2471, 2562, 3616
Bsh1285I CGRYCG 1 cut(s) 95
BshFI GGCC 3 cut(s) 487, 939, 2240
BshNI GGYRCC 1 cut(s) 1275
BshVI ATCGAT 1 cut(s) 2724
BsiEI CGRYCG 1 cut(s) 95
BsiHKAI GWGCWC 2 cut(s) 2309, 3201
BsiHKCI CYCGRG 2 cut(s) 2762, 3538
BsiSI CCGG 3 cut(s) 1846, 2127, 2481
BslFI GGGAC 4 cut(s) 891, 1809, 2817, 3069
BslI CCNNNNNNNGG 7 cut(s) 524, 1042, 1240, 1832, 2909, 3661, 3719
BsmAI GTCTC 9 cut(s) 205, 686, 2287, 2417, 2759, 2960, 3014, 3294, 3690
BsmBI CGTCTC 2 cut(s) 205, 3294
BsmFI GGGAC 4 cut(s) 891, 1809, 2817, 3069
BsmI GAATGC 1 cut(s) 362
BsnI GGCC 3 cut(s) 487, 939, 2240
BsoBI CYCGRG 2 cut(s) 2762, 3538
Bsp1286I GDGCHC 4 cut(s) 413, 2309, 3201, 3947
Bsp1407I TGTACA 3 cut(s) 3246, 3519, 3759
Bsp19I CCATGG 2 cut(s) 2796, 3867
Bsp68I TCGCGA 1 cut(s) 2347
BspACI CCGC 7 cut(s) 353, 2070, 2560, 2562, 2592, 2928, 3616
BspANI GGCC 3 cut(s) 487, 939, 2240
BspDI ATCGAT 1 cut(s) 2724
BspFNI CGCG 5 cut(s) 1899, 2347, 2471, 2562, 3616
BspHI TCATGA 1 cut(s) 4143
BspLI GGNNCC 3 cut(s) 1060, 1277, 3666
BspMAI CTGCAG 1 cut(s) 3196
BspPI GGATC 6 cut(s) 785, 865, 2262, 2986, 3031, 3304
BspT107I GGYRCC 1 cut(s) 1275
BspTI CTTAAG 1 cut(s) 1753
BsrDI GCAATG 4 cut(s) 3373, 3573, 3595, 4101
BsrGI TGTACA 3 cut(s) 3246, 3519, 3759
BsrI ACTGG 5 cut(s) 1948, 2183, 2410, 2974, 3682
BssNI GRCGYC 1 cut(s) 3821
BssSI CACGAG 2 cut(s) 900, 2622
BssT1I CCWWGG 4 cut(s) 718, 2796, 3867, 4077
Bst2BI CACGAG 2 cut(s) 900, 2622
Bst2UI CCWGG 7 cut(s) 489, 519, 875, 924, 1238, 2811, 3126
Bst6I CTCTTC 5 cut(s) 543, 2535, 2673, 3461, 4022
BstACI GRCGYC 1 cut(s) 3821
BstAFI CTTAAG 1 cut(s) 1753
BstAPI GCANNNNNTGC 2 cut(s) 911, 3771
BstAUI TGTACA 3 cut(s) 3246, 3519, 3759
BstC8I GCNNGC 7 cut(s) 1089, 1289, 1459, 1933, 2349, 3358, 3886
BstDSI CCRYGG 6 cut(s) 2090, 2149, 2560, 2796, 2859, 3867
BstENI CCTNNNNNAGG 3 cut(s) 1238, 2907, 3659
BstFNI CGCG 5 cut(s) 1899, 2347, 2471, 2562, 3616
BstHHI GCGC 5 cut(s) 1901, 2471, 3588, 3616, 3852
BstMAI GTCTC 9 cut(s) 205, 686, 2287, 2417, 2759, 2960, 3014, 3294, 3690
BstMCI CGRYCG 1 cut(s) 95
BstNI CCWGG 7 cut(s) 489, 519, 875, 924, 1238, 2811, 3126
BstSCI CCNGG 9 cut(s) 487, 517, 873, 922, 1236, 2126, 2479, 2809, 3124
BstSFI CTRYAG 5 cut(s) 1294, 1902, 2829, 3192, 3525
BstUI CGCG 5 cut(s) 1899, 2347, 2471, 2562, 3616
BstV1I GCAGC 1 cut(s) 2942
BstV2I GAAGAC 3 cut(s) 565, 2444, 3412
BstX2I RGATCY 4 cut(s) 790, 870, 2267, 3493
BstXI CCANNNNNNTGG 3 cut(s) 393, 3165, 3921
BstYI RGATCY 4 cut(s) 790, 870, 2267, 3493
Bsu15I ATCGAT 1 cut(s) 2724
Bsu36I CCTNAGG 2 cut(s) 2430, 2601
BsuI GTATCC 2 cut(s) 1752, 2607
BsuRI GGCC 3 cut(s) 487, 939, 2240
BsuTUI ATCGAT 1 cut(s) 2724
BtgI CCRYGG 6 cut(s) 2090, 2149, 2560, 2796, 2859, 3867
BtgZI GCGATG 1 cut(s) 2328
BtsI GCAGTG 2 cut(s) 104, 1620
BtsIMutI CAGTG 5 cut(s) 104, 1620, 2309, 2388, 2515
BtuMI TCGCGA 1 cut(s) 2347
Cac8I GCNNGC 7 cut(s) 1089, 1289, 1459, 1933, 2349, 3358, 3886
CaiI CAGNNNCTG 1 cut(s) 794
CciI TCATGA 1 cut(s) 4143
CfoI GCGC 5 cut(s) 1901, 2471, 3588, 3616, 3852
Cfr13I GGNCC 4 cut(s) 512, 2239, 3074, 3652
Cfr42I CCGCGG 1 cut(s) 2563
ClaI ATCGAT 1 cut(s) 2724
CseI GACGC 3 cut(s) 1896, 3276, 3829
Csp6I GTAC 7 cut(s) 1796, 3247, 3520, 3622, 3696, 3760, 3934
CspCI CAANNNNNGTGG 4 cut(s) 2841, 2876, 3778, 3813
CviQI GTAC 7 cut(s) 1796, 3247, 3520, 3622, 3696, 3760, 3934
DraI TTTAAA 3 cut(s) 130, 1201, 2323
DriI GACNNNNNGTC 1 cut(s) 3062
EaeI YGGCCR 1 cut(s) 937
Eam1104I CTCTTC 5 cut(s) 543, 2535, 2673, 3461, 4022
Eam1105I GACNNNNNGTC 1 cut(s) 3062
EarI CTCTTC 5 cut(s) 543, 2535, 2673, 3461, 4022
Eco130I CCWWGG 4 cut(s) 718, 2796, 3867, 4077
Eco147I AGGCCT 1 cut(s) 487
Eco24I GRGCYC 2 cut(s) 413, 3947
Eco32I GATATC 4 cut(s) 886, 1171, 2785, 3013
Eco47I GGWCC 3 cut(s) 512, 3074, 3652
Eco57I CTGAAG 1 cut(s) 1067
Eco81I CCTNAGG 2 cut(s) 2430, 2601
Eco88I CYCGRG 2 cut(s) 2762, 3538
EcoNI CCTNNNNNAGG 3 cut(s) 1238, 2907, 3659
EcoO109I RGGNCCY 1 cut(s) 3652
EcoRI GAATTC 1 cut(s) 1492
EcoRII CCWGG 7 cut(s) 487, 517, 873, 922, 1236, 2809, 3124
EcoRV GATATC 4 cut(s) 886, 1171, 2785, 3013
EcoT14I CCWWGG 4 cut(s) 718, 2796, 3867, 4077
EcoT38I GRGCYC 2 cut(s) 413, 3947
ErhI CCWWGG 4 cut(s) 718, 2796, 3867, 4077
Esp3I CGTCTC 2 cut(s) 205, 3294
FaqI GGGAC 4 cut(s) 891, 1809, 2817, 3069
FauI CCCGC 2 cut(s) 2567, 2585
FauNDI CATATG 3 cut(s) 1732, 2050, 3729
FblI GTMKAC 1 cut(s) 3066
Fnu4HI GCNGC 2 cut(s) 2928, 2931
FriOI GRGCYC 2 cut(s) 413, 3947
Fsp4HI GCNGC 2 cut(s) 2928, 2931
FspBI CTAG 3 cut(s) 1251, 3003, 3656
GlaI GCGC 5 cut(s) 1900, 2470, 3587, 3615, 3851
GluI GCNGC 2 cut(s) 2928, 2931
GsaI CCCAGC 1 cut(s) 2021
GsuI CTGGAG 7 cut(s) 1077, 1220, 1590, 1660, 1965, 3147, 3665
HaeIII GGCC 3 cut(s) 487, 939, 2240
HapII CCGG 3 cut(s) 1846, 2127, 2481
HgaI GACGC 3 cut(s) 1896, 3276, 3829
HhaI GCGC 5 cut(s) 1901, 2471, 3588, 3616, 3852
Hin1I GRCGYC 1 cut(s) 3821
Hin6I GCGC 5 cut(s) 1899, 2469, 3586, 3614, 3850
HinP1I GCGC 5 cut(s) 1899, 2469, 3586, 3614, 3850
HincII GTYRAC 3 cut(s) 25, 954, 2106
HindII GTYRAC 3 cut(s) 25, 954, 2106
HindIII AAGCTT 2 cut(s) 86, 1455
HpaI GTTAAC 1 cut(s) 2106
HpaII CCGG 3 cut(s) 1846, 2127, 2481
HphI GGTGA 2 cut(s) 26, 3883
Hpy166II GTNNAC 9 cut(s) 25, 266, 954, 1620, 2106, 2642, 3067, 3522, 3739
Hpy188I TCNGA 9 cut(s) 175, 619, 1835, 2253, 2311, 2499, 2585, 3301, 3309
Hpy8I GTNNAC 9 cut(s) 25, 266, 954, 1620, 2106, 2642, 3067, 3522, 3739
Hpy99I CGWCG 1 cut(s) 296
HpyCH4IV ACGT 5 cut(s) 638, 1013, 2234, 2406, 3322
HpySE526I ACGT 5 cut(s) 638, 1013, 2234, 2406, 3322
Hsp92I GRCGYC 1 cut(s) 3821
HspAI GCGC 5 cut(s) 1899, 2469, 3586, 3614, 3850
KspAI GTTAAC 1 cut(s) 2106
KspI CCGCGG 1 cut(s) 2563
LmnI GCTCC 6 cut(s) 1058, 1162, 1571, 1946, 2513, 3753
Lsp1109I GCAGC 1 cut(s) 2942
MaeI CTAG 3 cut(s) 1251, 3003, 3656
MaeII ACGT 5 cut(s) 638, 1013, 2234, 2406, 3322
MaeIII GTNAC 8 cut(s) 136, 150, 187, 309, 1543, 1817, 2392, 2633
MflI RGATCY 4 cut(s) 790, 870, 2267, 3493
MhlI GDGCHC 4 cut(s) 413, 2309, 3201, 3947
MlsI TGGCCA 1 cut(s) 939
MluNI TGGCCA 1 cut(s) 939
MlyI GAGTC 9 cut(s) 161, 688, 873, 1390, 2419, 2521, 2690, 2703, 4067
MmeI TCCRAC 4 cut(s) 562, 1060, 1813, 3942
Mox20I TGGCCA 1 cut(s) 939
MroXI GAANNNNTTC 5 cut(s) 562, 783, 1496, 3088, 3394
MscI TGGCCA 1 cut(s) 939
MslI CAYNNNNRTG 3 cut(s) 2939, 3167, 3833
Msp20I TGGCCA 1 cut(s) 939
MspA1I CMGCKG 1 cut(s) 2562
MspCI CTTAAG 1 cut(s) 1753
MspI CCGG 3 cut(s) 1846, 2127, 2481
MspR9I CCNGG 9 cut(s) 489, 519, 875, 924, 1238, 2128, 2481, 2811, 3126
Mva1269I GAATGC 1 cut(s) 362
MvaI CCWGG 7 cut(s) 489, 519, 875, 924, 1238, 2811, 3126
MvnI CGCG 5 cut(s) 1899, 2347, 2471, 2562, 3616
NciI CCSGG 2 cut(s) 2128, 2481
NcoI CCATGG 2 cut(s) 2796, 3867
NdeI CATATG 3 cut(s) 1732, 2050, 3729
NlaIV GGNNCC 3 cut(s) 1060, 1277, 3666
NmuCI GTSAC 2 cut(s) 1543, 2392
NruI TCGCGA 1 cut(s) 2347
PaeR7I CTCGAG 1 cut(s) 2762
PagI TCATGA 1 cut(s) 4143
PceI AGGCCT 1 cut(s) 487
PctI GAATGC 1 cut(s) 362
PdmI GAANNNNTTC 5 cut(s) 562, 783, 1496, 3088, 3394
PflMI CCANNNNNTGG 1 cut(s) 1042
PfoI TCCNGGA 2 cut(s) 1236, 2809
PkrI GCNGC 2 cut(s) 2929, 2932
PleI GAGTC 9 cut(s) 161, 688, 873, 1390, 2419, 2521, 2689, 2703, 4067
PpsI GAGTC 9 cut(s) 161, 688, 873, 1390, 2419, 2521, 2689, 2703, 4067
PpuMI RGGWCCY 1 cut(s) 3652
PsiI TTATAA 1 cut(s) 600
Psp5II RGGWCCY 1 cut(s) 3652
Psp6I CCWGG 7 cut(s) 487, 517, 873, 922, 1236, 2809, 3124
PspFI CCCAGC 1 cut(s) 2017
PspGI CCWGG 7 cut(s) 487, 517, 873, 922, 1236, 2809, 3124
PspN4I GGNNCC 3 cut(s) 1060, 1277, 3666
PspPI GGNCC 4 cut(s) 512, 2239, 3074, 3652
PspPPI RGGWCCY 1 cut(s) 3652
PstI CTGCAG 1 cut(s) 3196
PstNI CAGNNNCTG 1 cut(s) 794
PsuI RGATCY 4 cut(s) 790, 870, 2267, 3493
RruI TCGCGA 1 cut(s) 2347
RsaI GTAC 7 cut(s) 1797, 3248, 3521, 3623, 3697, 3761, 3935
RsaNI GTAC 7 cut(s) 1796, 3247, 3520, 3622, 3696, 3760, 3934
RseI CAYNNNNRTG 3 cut(s) 2939, 3167, 3833
SacII CCGCGG 1 cut(s) 2563
SatI GCNGC 2 cut(s) 2928, 2931
Sau96I GGNCC 4 cut(s) 512, 2239, 3074, 3652
ScaI AGTACT 1 cut(s) 1797
SchI GAGTC 9 cut(s) 161, 688, 873, 1390, 2419, 2521, 2690, 2703, 4067
ScrFI CCNGG 9 cut(s) 489, 519, 875, 924, 1238, 2128, 2481, 2811, 3126
SduI GDGCHC 4 cut(s) 413, 2309, 3201, 3947
SfcI CTRYAG 5 cut(s) 1294, 1902, 2829, 3192, 3525
Sfr274I CTCGAG 1 cut(s) 2762
Sfr303I CCGCGG 1 cut(s) 2563
SgrBI CCGCGG 1 cut(s) 2563
SinI GGWCC 3 cut(s) 512, 3074, 3652
SlaI CTCGAG 1 cut(s) 2762
SmiI ATTTAAAT 1 cut(s) 1201
SmiMI CAYNNNNRTG 3 cut(s) 2939, 3167, 3833
SmlI CTYRAG 5 cut(s) 197, 1462, 1753, 2762, 2777
SmoI CTYRAG 5 cut(s) 197, 1462, 1753, 2762, 2777
SseBI AGGCCT 1 cut(s) 487
SsiI CCGC 7 cut(s) 353, 2070, 2560, 2562, 2592, 2928, 3616
SspI AATATT 2 cut(s) 1271, 2693
SspMI CTAG 3 cut(s) 1251, 3003, 3656
StuI AGGCCT 1 cut(s) 487
StyD4I CCNGG 9 cut(s) 487, 517, 873, 922, 1236, 2126, 2479, 2809, 3124
StyI CCWWGG 4 cut(s) 718, 2796, 3867, 4077
SwaI ATTTAAAT 1 cut(s) 1201
TaiI ACGT 5 cut(s) 641, 1016, 2237, 2409, 3325
TaqII GACCGA 1 cut(s) 81
TatI WGTACW 6 cut(s) 1795, 3246, 3519, 3621, 3759, 3933
TauI GCSGC 1 cut(s) 2930
TscAI CASTG 5 cut(s) 104, 1627, 2309, 2395, 2515
TseFI GTSAC 2 cut(s) 1543, 2392
TseI GCWGC 1 cut(s) 2930
Tsp45I GTSAC 2 cut(s) 1543, 2392
TspGWI ACGGA 3 cut(s) 251, 1504, 2138
TspRI CASTG 5 cut(s) 104, 1627, 2309, 2395, 2515
Van91I CCANNNNNTGG 1 cut(s) 1042
Vha464I CTTAAG 1 cut(s) 1753
VpaK11BI GGWCC 3 cut(s) 512, 3074, 3652
XagI CCTNNNNNAGG 3 cut(s) 1238, 2907, 3659
XapI RAATTY 5 cut(s) 1178, 1473, 1492, 2078, 2158
XbaI TCTAGA 1 cut(s) 1250
XcmI CCANNNNNNNNNTGG 2 cut(s) 368, 2890
XhoI CTCGAG 1 cut(s) 2762
XmiI GTMKAC 1 cut(s) 3066
XmnI GAANNNNTTC 5 cut(s) 562, 783, 1496, 3088, 3394
XspI CTAG 3 cut(s) 1251, 3003, 3656
ZrmI AGTACT 1 cut(s) 1797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.