pleiotropic drug resistance protein 3-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_tran | PF00005 | 177 - 358 | 1.2e-14 | ABC transporter |
| ABC2_membrane | PF01061 | 513 - 724 | 5.7e-44 | ABC-2 type transporter |
| PDR_assoc | PF08370 | 729 - 791 | 2.4e-21 | Plant PDR ABC transporter associated |
| ABC_tran | PF00005 | 867 - 1018 | 8.8e-20 | ABC transporter |
| ABC2_membrane | PF01061 | 1163 - 1377 | 2.9e-58 | ABC-2 type transporter |
| ABC2_membrane_3 | PF12698 | 1212 - 1379 | 7.1e-07 | ABC-2 family transporter protein |
| GSDH | PF07995 | 1602 - 1901 | 1.1e-19 | Glucose / Sorbosone dehydrogenase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3784 |
| Acc16I | TGCGCA | 2 cut(s) | 3792, 6291 |
| Acc36I | ACCTGC | 2 cut(s) | 3784, 5843 |
| Acc65I | GGTACC | 2 cut(s) | 4780, 5150 |
| AccB1I | GGYRCC | 2 cut(s) | 4780, 5150 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 593, 1333, 4518 |
| AccBSI | CCGCTC | 2 cut(s) | 3730, 5784 |
| AccI | GTMKAC | 4 cut(s) | 1239, 1401, 2544, 3741 |
| AccII | CGCG | 1 cut(s) | 4806 |
| AciI | CCGC | 9 cut(s) | 132, 2070, 3303, 3730, 4401, 5154, 5782, 5825, 5877 |
| AclI | AACGTT | 2 cut(s) | 152, 4874 |
| AcoI | YGGCCR | 3 cut(s) | 1006, 4984, 5024 |
| AfeI | AGCGCT | 1 cut(s) | 3222 |
| AflIII | ACRYGT | 2 cut(s) | 954, 6009 |
| AgeI | ACCGGT | 2 cut(s) | 3326, 6029 |
| AhlI | ACTAGT | 2 cut(s) | 2944, 5180 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1026, 1058, 3333, 3365 |
| AleI | CACNNNNGTG | 1 cut(s) | 6297 |
| Alw21I | GWGCWC | 6 cut(s) | 74, 684, 2332, 3598, 5104, 5917 |
| Alw26I | GTCTC | 7 cut(s) | 959, 1181, 1788, 2352, 2718, 5667, 6341 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2030, 2560, 4002 |
| Ama87I | CYCGRG | 1 cut(s) | 1922 |
| Aor51HI | AGCGCT | 1 cut(s) | 3222 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3090, 3122, 4922, 4954 |
| AseI | ATTAAT | 1 cut(s) | 6761 |
| AsiGI | ACCGGT | 2 cut(s) | 3326, 6029 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 423, 1566, 2014, 4197, 5044, 5431 |
| Asp718I | GGTACC | 2 cut(s) | 4780, 5150 |
| AspA2I | CCTAGG | 1 cut(s) | 2314 |
| AspLEI | GCGC | 8 cut(s) | 162, 619, 1581, 1630, 2985, 3223, 3793, 6292 |
| AsuC2I | CCSGG | 3 cut(s) | 653, 3395, 4827 |
| AsuII | TTCGAA | 1 cut(s) | 6515 |
| AvaI | CYCGRG | 1 cut(s) | 1922 |
| AvrII | CCTAGG | 1 cut(s) | 2314 |
| AxyI | CCTNAGG | 1 cut(s) | 4854 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4492, 4525 |
| BalI | TGGCCA | 2 cut(s) | 1008, 5026 |
| BamHI | GGATCC | 1 cut(s) | 6710 |
| BanI | GGYRCC | 2 cut(s) | 4780, 5150 |
| BanII | GRGCYC | 2 cut(s) | 684, 5494 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5270, 5302 |
| BauI | CACGAG | 3 cut(s) | 4037, 4431, 6420 |
| BbsI | GAAGAC | 5 cut(s) | 111, 710, 1115, 1380, 4106 |
| Bbv12I | GWGCWC | 6 cut(s) | 74, 684, 2332, 3598, 5104, 5917 |
| BceAI | ACGGC | 3 cut(s) | 3005, 4341, 4971 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2156, 2190 |
| BciVI | GTATCC | 1 cut(s) | 5711 |
| BclI | TGATCA | 6 cut(s) | 291, 3798, 4212, 4390, 4819, 4915 |
| BcnI | CCSGG | 3 cut(s) | 653, 3395, 4827 |
| BcoDI | GTCTC | 7 cut(s) | 959, 1181, 1788, 2352, 2718, 5667, 6341 |
| BcuI | ACTAGT | 2 cut(s) | 2944, 5180 |
| BfoI | RGCGCY | 2 cut(s) | 620, 3224 |
| BfuAI | ACCTGC | 2 cut(s) | 3784, 5843 |
| BfuI | GTATCC | 1 cut(s) | 5711 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 588 |
| BglII | AGATCT | 3 cut(s) | 2885, 4135, 4405 |
| BlnI | CCTAGG | 1 cut(s) | 2314 |
| BlpI | GCTNAGC | 1 cut(s) | 5103 |
| BmcAI | AGTACT | 2 cut(s) | 1361, 5893 |
| BmeT110I | CYCGRG | 1 cut(s) | 1922 |
| BmrI | ACTGGG | 3 cut(s) | 3141, 3971, 6663 |
| BmuI | ACTGGG | 3 cut(s) | 3141, 3971, 6663 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2241 |
| BpiI | GAAGAC | 5 cut(s) | 111, 710, 1115, 1380, 4106 |
| BpmI | CTGGAG | 7 cut(s) | 570, 2334, 2649, 3550, 5463, 5649, 6407 |
| Bpu10I | CCTNAGC | 1 cut(s) | 6480 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 5103 |
| Bpu14I | TTCGAA | 1 cut(s) | 6515 |
| BpuEI | CTTGAG | 3 cut(s) | 492, 629, 6316 |
| BpuMI | CCSGG | 3 cut(s) | 653, 3395, 4827 |
| BsaAI | YACGTR | 1 cut(s) | 1659 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4893 |
| BsaI | GGTCTC | 1 cut(s) | 1181 |
| BsaWI | WCCGGW | 2 cut(s) | 3326, 6029 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 5848, 5878, 6059, 6089 |
| Bse118I | RCCGGY | 3 cut(s) | 318, 3326, 6029 |
| Bse21I | CCTNAGG | 1 cut(s) | 4854 |
| Bse3DI | GCAATG | 2 cut(s) | 1623, 1741 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4893 |
| BseJI | GATNNNNATC | 1 cut(s) | 4893 |
| BseMI | GCAATG | 2 cut(s) | 1623, 1741 |
| BseRI | GAGGAG | 5 cut(s) | 3691, 3760, 4871, 5597, 6404 |
| BseYI | CCCAGC | 1 cut(s) | 3223 |
| BsgI | GTGCAG | 2 cut(s) | 5956, 6082 |
| Bsh1236I | CGCG | 1 cut(s) | 4806 |
| BshNI | GGYRCC | 2 cut(s) | 4780, 5150 |
| BshTI | ACCGGT | 2 cut(s) | 3326, 6029 |
| BsiHKAI | GWGCWC | 6 cut(s) | 74, 684, 2332, 3598, 5104, 5917 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1922 |
| BsiSI | CCGG | 6 cut(s) | 319, 652, 3327, 3394, 4826, 6030 |
| BsiWI | CGTACG | 1 cut(s) | 1655 |
| BslFI | GGGAC | 7 cut(s) | 839, 2374, 4196, 4710, 4835, 5235, 6421 |
| BsmAI | GTCTC | 7 cut(s) | 959, 1181, 1788, 2352, 2718, 5667, 6341 |
| BsmFI | GGGAC | 7 cut(s) | 839, 2374, 4196, 4710, 4835, 5235, 6421 |
| BsmI | GAATGC | 4 cut(s) | 3167, 4532, 4958, 5396 |
| Bso31I | GGTCTC | 1 cut(s) | 1181 |
| BsoBI | CYCGRG | 1 cut(s) | 1922 |
| Bsp119I | TTCGAA | 1 cut(s) | 6515 |
| Bsp1286I | GDGCHC | 7 cut(s) | 74, 684, 2332, 3598, 5104, 5494, 5917 |
| Bsp1407I | TGTACA | 1 cut(s) | 3917 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 5103 |
| Bsp19I | CCATGG | 1 cut(s) | 1243 |
| BspACI | CCGC | 9 cut(s) | 132, 2070, 3303, 3730, 4401, 5154, 5782, 5825, 5877 |
| BspFNI | CGCG | 1 cut(s) | 4806 |
| BspHI | TCATGA | 3 cut(s) | 918, 2377, 5289 |
| BspMAI | CTGCAG | 6 cut(s) | 16, 79, 126, 1747, 3340, 6507 |
| BspMI | ACCTGC | 2 cut(s) | 3784, 5843 |
| BspT104I | TTCGAA | 1 cut(s) | 6515 |
| BspT107I | GGYRCC | 2 cut(s) | 4780, 5150 |
| BspTNI | GGTCTC | 1 cut(s) | 1181 |
| BsrBI | CCGCTC | 2 cut(s) | 3730, 5784 |
| BsrDI | GCAATG | 2 cut(s) | 1623, 1741 |
| BsrFI | RCCGGY | 3 cut(s) | 318, 3326, 6029 |
| BsrGI | TGTACA | 1 cut(s) | 3917 |
| BssAI | RCCGGY | 3 cut(s) | 318, 3326, 6029 |
| BssNAI | GTATAC | 2 cut(s) | 1240, 3742 |
| BssSI | CACGAG | 3 cut(s) | 4037, 4431, 6420 |
| BssT1I | CCWWGG | 8 cut(s) | 943, 1243, 2001, 2180, 2314, 4512, 5510, 5601 |
| Bst1107I | GTATAC | 2 cut(s) | 1240, 3742 |
| Bst2BI | CACGAG | 3 cut(s) | 4037, 4431, 6420 |
| Bst6I | CTCTTC | 3 cut(s) | 1544, 2820, 4365 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1553 |
| BstAUI | TGTACA | 1 cut(s) | 3917 |
| BstBAI | YACGTR | 1 cut(s) | 1659 |
| BstBI | TTCGAA | 1 cut(s) | 6515 |
| BstDSI | CCRYGG | 1 cut(s) | 1243 |
| BstEII | GGTNACC | 3 cut(s) | 3322, 4227, 5315 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1328 |
| BstFNI | CGCG | 1 cut(s) | 4806 |
| BstH2I | RGCGCY | 2 cut(s) | 620, 3224 |
| BstHHI | GCGC | 8 cut(s) | 162, 619, 1581, 1630, 2985, 3223, 3793, 6292 |
| BstMAI | GTCTC | 7 cut(s) | 959, 1181, 1788, 2352, 2718, 5667, 6341 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 588, 1553, 2989, 3071, 3440, 3613 |
| BstNSI | RCATGY | 8 cut(s) | 56, 275, 958, 1551, 4741, 5806, 6013, 6269 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2241 |
| BstPI | GGTNACC | 3 cut(s) | 3322, 4227, 5315 |
| BstUI | CGCG | 1 cut(s) | 4806 |
| BstV2I | GAAGAC | 5 cut(s) | 111, 710, 1115, 1380, 4106 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1159, 4493 |
| BstZ17I | GTATAC | 2 cut(s) | 1240, 3742 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4854 |
| BsuI | GTATCC | 1 cut(s) | 5711 |
| BtgI | CCRYGG | 1 cut(s) | 1243 |
| BtgZI | GCGATG | 1 cut(s) | 5530 |
| BtsI | GCAGTG | 8 cut(s) | 72, 131, 1740, 1782, 3009, 3920, 5139, 6745 |
| BveI | ACCTGC | 2 cut(s) | 3784, 5843 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2030, 2560, 4002 |
| CciI | TCATGA | 3 cut(s) | 918, 2377, 5289 |
| CfoI | GCGC | 8 cut(s) | 162, 619, 1581, 1630, 2985, 3223, 3793, 6292 |
| Cfr10I | RCCGGY | 3 cut(s) | 318, 3326, 6029 |
| CseI | GACGC | 1 cut(s) | 1877 |
| CsiI | ACCWGGT | 1 cut(s) | 2956 |
| CspAI | ACCGGT | 2 cut(s) | 3326, 6029 |
| DraI | TTTAAA | 2 cut(s) | 2343, 3496 |
| EaeI | YGGCCR | 3 cut(s) | 1006, 4984, 5024 |
| Eam1104I | CTCTTC | 3 cut(s) | 1544, 2820, 4365 |
| EarI | CTCTTC | 3 cut(s) | 1544, 2820, 4365 |
| Ecl136II | GAGCTC | 1 cut(s) | 682 |
| Eco130I | CCWWGG | 8 cut(s) | 943, 1243, 2001, 2180, 2314, 4512, 5510, 5601 |
| Eco147I | AGGCCT | 2 cut(s) | 6052, 6580 |
| Eco24I | GRGCYC | 2 cut(s) | 684, 5494 |
| Eco31I | GGTCTC | 1 cut(s) | 1181 |
| Eco32I | GATATC | 4 cut(s) | 538, 1077, 2274, 6281 |
| Eco47III | AGCGCT | 1 cut(s) | 3222 |
| Eco53kI | GAGCTC | 1 cut(s) | 682 |
| Eco81I | CCTNAGG | 1 cut(s) | 4854 |
| Eco88I | CYCGRG | 1 cut(s) | 1922 |
| Eco91I | GGTNACC | 3 cut(s) | 3322, 4227, 5315 |
| EcoICRI | GAGCTC | 1 cut(s) | 682 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1328 |
| EcoO109I | RGGNCCY | 3 cut(s) | 36, 6141, 6435 |
| EcoO65I | GGTNACC | 3 cut(s) | 3322, 4227, 5315 |
| EcoRI | GAATTC | 2 cut(s) | 2168, 6517 |
| EcoRV | GATATC | 4 cut(s) | 538, 1077, 2274, 6281 |
| EcoT14I | CCWWGG | 8 cut(s) | 943, 1243, 2001, 2180, 2314, 4512, 5510, 5601 |
| EcoT22I | ATGCAT | 4 cut(s) | 58, 3029, 5804, 6696 |
| EcoT38I | GRGCYC | 2 cut(s) | 684, 5494 |
| ErhI | CCWWGG | 8 cut(s) | 943, 1243, 2001, 2180, 2314, 4512, 5510, 5601 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1536, 1568, 3333, 3365, 5333, 5365 |
| FaqI | GGGAC | 7 cut(s) | 839, 2374, 4196, 4710, 4835, 5235, 6421 |
| FauI | CCCGC | 1 cut(s) | 3310 |
| FauNDI | CATATG | 4 cut(s) | 2764, 5629, 5846, 6409 |
| FbaI | TGATCA | 6 cut(s) | 291, 3798, 4212, 4390, 4819, 4915 |
| FblI | GTMKAC | 4 cut(s) | 1239, 1401, 2544, 3741 |
| FriOI | GRGCYC | 2 cut(s) | 684, 5494 |
| FspAI | RTGCGCAY | 1 cut(s) | 6291 |
| FspI | TGCGCA | 2 cut(s) | 3792, 6291 |
| GlaI | GCGC | 8 cut(s) | 161, 618, 1580, 1629, 2984, 3222, 3792, 6291 |
| GsaI | CCCAGC | 1 cut(s) | 3227 |
| GsuI | CTGGAG | 7 cut(s) | 570, 2334, 2649, 3550, 5463, 5649, 6407 |
| HaeII | RGCGCY | 2 cut(s) | 620, 3224 |
| HapII | CCGG | 6 cut(s) | 319, 652, 3327, 3394, 4826, 6030 |
| HgaI | GACGC | 1 cut(s) | 1877 |
| HhaI | GCGC | 8 cut(s) | 162, 619, 1581, 1630, 2985, 3223, 3793, 6292 |
| Hin6I | GCGC | 8 cut(s) | 160, 617, 1579, 1628, 2983, 3221, 3791, 6290 |
| HinP1I | GCGC | 8 cut(s) | 160, 617, 1579, 1628, 2983, 3221, 3791, 6290 |
| HincII | GTYRAC | 4 cut(s) | 1402, 2545, 5737, 6177 |
| HindII | GTYRAC | 4 cut(s) | 1402, 2545, 5737, 6177 |
| HindIII | AAGCTT | 3 cut(s) | 466, 3242, 5081 |
| HpaII | CCGG | 6 cut(s) | 319, 652, 3327, 3394, 4826, 6030 |
| Hpy166II | GTNNAC | 9 cut(s) | 1240, 1402, 2545, 3742, 3920, 4691, 5139, 5737, 6177 |
| Hpy8I | GTNNAC | 9 cut(s) | 1240, 1402, 2545, 3742, 3920, 4691, 5139, 5737, 6177 |
| HpyCH4IV | ACGT | 4 cut(s) | 152, 1658, 2854, 4874 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 588, 1553, 2989, 3071, 3440, 3613 |
| HpySE526I | ACGT | 4 cut(s) | 152, 1658, 2854, 4874 |
| HspAI | GCGC | 8 cut(s) | 160, 617, 1579, 1628, 2983, 3221, 3791, 6290 |
| KpnI | GGTACC | 2 cut(s) | 4784, 5154 |
| Ksp22I | TGATCA | 6 cut(s) | 291, 3798, 4212, 4390, 4819, 4915 |
| MabI | ACCWGGT | 1 cut(s) | 2956 |
| MaeII | ACGT | 4 cut(s) | 152, 1658, 2854, 4874 |
| MbiI | CCGCTC | 2 cut(s) | 3730, 5784 |
| MfeI | CAATTG | 2 cut(s) | 969, 1130 |
| MhlI | GDGCHC | 7 cut(s) | 74, 684, 2332, 3598, 5104, 5494, 5917 |
| MlsI | TGGCCA | 2 cut(s) | 1008, 5026 |
| MluNI | TGGCCA | 2 cut(s) | 1008, 5026 |
| MlyI | GAGTC | 5 cut(s) | 478, 562, 2837, 5915, 6539 |
| MmeI | TCCRAC | 3 cut(s) | 1417, 3881, 6135 |
| Mox20I | TGGCCA | 2 cut(s) | 1008, 5026 |
| Mph1103I | ATGCAT | 4 cut(s) | 58, 3029, 5804, 6696 |
| MroXI | GAANNNNTTC | 6 cut(s) | 423, 1566, 2014, 4197, 5044, 5431 |
| MscI | TGGCCA | 2 cut(s) | 1008, 5026 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1389, 1494, 3388, 4791, 5730, 6297 |
| Msp20I | TGGCCA | 2 cut(s) | 1008, 5026 |
| MspA1I | CMGCKG | 2 cut(s) | 3074, 3426 |
| MspI | CCGG | 6 cut(s) | 319, 652, 3327, 3394, 4826, 6030 |
| MunI | CAATTG | 2 cut(s) | 969, 1130 |
| Mva1269I | GAATGC | 4 cut(s) | 3167, 4532, 4958, 5396 |
| MvnI | CGCG | 1 cut(s) | 4806 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 588, 1553, 2989, 3071, 3440, 3613 |
| NciI | CCSGG | 3 cut(s) | 653, 3395, 4827 |
| NcoI | CCATGG | 1 cut(s) | 1243 |
| NdeI | CATATG | 4 cut(s) | 2764, 5629, 5846, 6409 |
| NmuCI | GTSAC | 8 cut(s) | 823, 1114, 2795, 3322, 4227, 5315, 5596, 5840 |
| NsbI | TGCGCA | 2 cut(s) | 3792, 6291 |
| NsiI | ATGCAT | 4 cut(s) | 58, 3029, 5804, 6696 |
| NspI | RCATGY | 8 cut(s) | 56, 275, 958, 1551, 4741, 5806, 6013, 6269 |
| NspV | TTCGAA | 1 cut(s) | 6515 |
| OliI | CACNNNNGTG | 1 cut(s) | 6297 |
| PaeI | GCATGC | 2 cut(s) | 56, 1551 |
| PagI | TCATGA | 3 cut(s) | 918, 2377, 5289 |
| PaqCI | CACCTGC | 1 cut(s) | 3784 |
| PceI | AGGCCT | 2 cut(s) | 6052, 6580 |
| PciI | ACATGT | 2 cut(s) | 954, 6009 |
| PctI | GAATGC | 4 cut(s) | 3167, 4532, 4958, 5396 |
| PdmI | GAANNNNTTC | 6 cut(s) | 423, 1566, 2014, 4197, 5044, 5431 |
| PfeI | GAWTC | 9 cut(s) | 860, 1148, 1849, 2474, 3380, 4421, 4889, 6182, 6743 |
| Pfl23II | CGTACG | 1 cut(s) | 1655 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 593, 1333, 4518 |
| PfoI | TCCNGGA | 2 cut(s) | 5440, 5665 |
| PinAI | ACCGGT | 2 cut(s) | 3326, 6029 |
| PleI | GAGTC | 5 cut(s) | 478, 562, 2836, 5915, 6539 |
| PpsI | GAGTC | 5 cut(s) | 478, 562, 2836, 5915, 6539 |
| Ppu21I | YACGTR | 1 cut(s) | 1659 |
| PpuMI | RGGWCCY | 3 cut(s) | 36, 6141, 6435 |
| PscI | ACATGT | 2 cut(s) | 954, 6009 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2241 |
| PshBI | ATTAAT | 1 cut(s) | 6761 |
| Psp124BI | GAGCTC | 1 cut(s) | 684 |
| Psp1406I | AACGTT | 2 cut(s) | 152, 4874 |
| Psp5II | RGGWCCY | 3 cut(s) | 36, 6141, 6435 |
| PspEI | GGTNACC | 3 cut(s) | 3322, 4227, 5315 |
| PspFI | CCCAGC | 1 cut(s) | 3223 |
| PspLI | CGTACG | 1 cut(s) | 1655 |
| PspPPI | RGGWCCY | 3 cut(s) | 36, 6141, 6435 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 6252, 6284 |
| PstI | CTGCAG | 6 cut(s) | 16, 79, 126, 1747, 3340, 6507 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2030, 2560, 4002 |
| PvuII | CAGCTG | 2 cut(s) | 3074, 3426 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1389, 1494, 3388, 4791, 5730, 6297 |
| SacI | GAGCTC | 1 cut(s) | 684 |
| SalI | GTCGAC | 2 cut(s) | 1400, 2543 |
| ScaI | AGTACT | 2 cut(s) | 1361, 5893 |
| SchI | GAGTC | 5 cut(s) | 478, 562, 2837, 5915, 6539 |
| SduI | GDGCHC | 7 cut(s) | 74, 684, 2332, 3598, 5104, 5494, 5917 |
| SexAI | ACCWGGT | 1 cut(s) | 2956 |
| SfuI | TTCGAA | 1 cut(s) | 6515 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1389, 1494, 3388, 4791, 5730, 6297 |
| SmlI | CTYRAG | 3 cut(s) | 507, 644, 6295 |
| SmoI | CTYRAG | 3 cut(s) | 507, 644, 6295 |
| SpeI | ACTAGT | 2 cut(s) | 2944, 5180 |
| SphI | GCATGC | 2 cut(s) | 56, 1551 |
| SseBI | AGGCCT | 2 cut(s) | 6052, 6580 |
| SsiI | CCGC | 9 cut(s) | 132, 2070, 3303, 3730, 4401, 5154, 5782, 5825, 5877 |
| SspI | AATATT | 3 cut(s) | 2537, 6587, 6706 |
| SstI | GAGCTC | 1 cut(s) | 684 |
| StuI | AGGCCT | 2 cut(s) | 6052, 6580 |
| StyI | CCWWGG | 8 cut(s) | 943, 1243, 2001, 2180, 2314, 4512, 5510, 5601 |
| TaiI | ACGT | 4 cut(s) | 155, 1661, 2857, 4877 |
| TaqII | GACCGA | 3 cut(s) | 4063, 5161, 6194 |
| TatI | WGTACW | 6 cut(s) | 1359, 3765, 3917, 4156, 5283, 5891 |
| TauI | GCSGC | 2 cut(s) | 134, 2073 |
| TfiI | GAWTC | 9 cut(s) | 860, 1148, 1849, 2474, 3380, 4421, 4889, 6182, 6743 |
| TseFI | GTSAC | 8 cut(s) | 823, 1114, 2795, 3322, 4227, 5315, 5596, 5840 |
| Tsp45I | GTSAC | 8 cut(s) | 823, 1114, 2795, 3322, 4227, 5315, 5596, 5840 |
| TspGWI | ACGGA | 6 cut(s) | 1280, 1976, 4887, 5442, 5631, 6478 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 593, 1333, 4518 |
| VspI | ATTAAT | 1 cut(s) | 6761 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1328 |
| XceI | RCATGY | 8 cut(s) | 56, 275, 958, 1551, 4741, 5806, 6013, 6269 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 5258 |
| XmaJI | CCTAGG | 1 cut(s) | 2314 |
| XmiI | GTMKAC | 4 cut(s) | 1239, 1401, 2544, 3741 |
| XmnI | GAANNNNTTC | 6 cut(s) | 423, 1566, 2014, 4197, 5044, 5431 |
| ZrmI | AGTACT | 2 cut(s) | 1361, 5893 |
| Zsp2I | ATGCAT | 4 cut(s) | 58, 3029, 5804, 6696 |