RLG00000021857

pleiotropic drug resistance protein 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000472
Physical Location & Seq
Forward (+)
78853143 .. 78857606
4464 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021857

Sequence Viewer

Length: 2115 bp
ATGGCCATGGTCATCACTAGCCTTGTGGGTTGTGGCCAACTGTCTTGTTCTGCTTGCTGTGTTCGATTTGTCATATATATGGAGAGCCGCCTTGGACTGGGGCATTTCTTTCTTCCCTGTTCAAGTTTGGGGCGAAGCTCAACGGGGGATCGAACGGTGGATCGGCTAGTTGGGGTTCTACTGGAAGCTTTCGTTGGCTTCCGAAGGGGGCCGATCAATGACAACGGAGGTCAGGGGCTGGTTCTGCTGCGATTTGTTTGTGTCACTGACATGGGTGCGGCTGGGACGACTTCGCACCGGGGCACAGTGGTGGAGGCTTCTCGCTGGCTGTGCGAGCTCTCAGTGGAGGAGACCTTGCAGGGTTGGCGCGCACTCACAGTGCTGAAACTGAGAGAGCAAGGTTTCCCACCAAATCGACTACAGCTTCTTCAAGATATAACTGGTGCATTTAGACCTGGCGTTCTTACGGCACTGATGGGTGTTAGTGGAGCCGGAAAGACAACACTGATGGACGTTCTTTCAGGAAGGAAAACTGGTGGACTTATTGAAGGAGACATTAGAATTGGAGGACACCCAAAAGTCCAAGAAACATATGCCAGAATATCTGGGTATTGCGAGCAAAGTGATATACATTCTCCAGAGCTTACAGTAGAAGAGTCAGTAGCATACTCAGCTTGGTTACGCTTGCCATCCCAGATTGCTAGAAATACTAGAGATGAGTTTGTGAAAGAAGTACTTCATATGATAGAGCTTGATGAAATCAAAGACGAGTTAGTTGGCATACCAGGTGGTAGTGGTATATCGACTGAACAGCGTAAAAGGCTAACAATAGCAGTAGAGCTTGTTTCAAATCCATCTGTTATATTTATGGATGAACCCACATCTGGTTTAGATGCCAGAGCAGCTGCAATAGTTATGCGAGTTGTGAAAAATATTGTCAGTACAAGGACTGTTGTTTGCACTATTCATCAGCCAAGTATTGACATATTTGAAGCATTCGATGAGCTTCTTTTGATGAAAAGAGGAGGACAAGTAATATACTGTGGAGAGCTGGGTCACGATTCAAGTAAGCTTATCCAATACTTACAGGGTATTTCTGGGGTTCCAAAAATCAAAGATAATTACAACCCAGCAACATGGATGTTAGAAGTCAAAAGTCCTTCTGCAAAAGCCAAACTCGCCTTAGATTTTGCTCAGCTTTATAGAGAATCACATCTATGCCAGAAGAACAATGACCTAGTTAGAGAACACAGCTTACCAGCACAAGGCTCAAAGGGATTGGATTTTCCTACTCGTTTCCCACAAAATGGATGGGAGCAATTTAAAGCATGTCTCTGGAAGCGACGTCTCTCCTACTGGAGAAATCCAAAGTATAACCTGGGGCGATTGTTAATCATTGCTGCATCCTCTTTGATATTTGAAAGGACAGAAAATGAGTTCTTCAGCATTCTAGGATCAATATTTATTTTACAACAAAACATGGGAATTGGTAATTGTTCCTCTGTTTTACCATTTGTCGCTTCTGAGCGCAATGTTGTATATCGAGAAAGGTTTTCTGGAATGTACTCCTCATGGGCATATTCTTTATCACAGGTGATCATTGAACTTCCTTATGTATTCTTTCAAGCAGTTTTGATTTCGACCATTACATATCCATCGATTGGTTTCCACTGGTCGCTATACAAAGTATTCTGGTATGTGTACGCTATGTTTTGCACGCTGCTCTACTTCACGTACTTCGGTATATTGGTTGCTTCTGTGACCCCAACTTTCCAAGTAGCTTCAGTATTAGCAAGTTTCTGCTACACCATGCTCAATCTGTTCTCGGGATACCTAATACCTCAACAAAACATTCCTAAATGGTGGGTTTGGGGTTACTACATTTGCCCTTTATCGTGGTCCTTAAAAGGTATTCTCACTTCACAGTACGGAGATCTAAACACGGAAATAGTACTCCGCGGGGAAGAAAAGACGATCAGTGCCTTCTTCGACAGCATCTATGGATACAACTATGATGATCTAGGAATTGTAGGAATTTTTCTTCTTGCATATCCACTAGTTTTCGCATTTGCGTTTGCACTTGCTACAGAAAAACTAAACTTCCAGAGGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

705

Amino Acids

78.82

Weight (kDa)

8.04

Isoelectric Point (pI)

38.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 143 - 295 2.4e-20 ABC transporter
ABC2_membrane PF01061 439 - 643 4.1e-51 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15230 AT4G15230 AT4G15230 AT4G15230 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15236
fragaria_vesca FvH4_4g21360 FvH4_4g21360 FvH4_4g21390 FvH4_6g49431 FvH4_6g49450
malus_domestica MD09G1044300.v1.1 MD16G1137900.v1.1 MD16G1138000.v1.1
prunus_persica Prupe.1G106800_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.3G273300_v2.0.a1
pyrus_communis pycom111g03460 pycom16g12210
rosa_chinensis RchiOBHm_Chr2g0169331 RchiOBHm_Chr2g0169361 RchiOBHm_Chr2g0169371 RchiOBHm_Chr2g0169381 RchiOBHm_Chr2g0169411 RchiOBHm_Chr4g0427141 RchiOBHm_Chr4g0427321
rosa_laevigata RLG00000007252 RLG00000007258 RLG00000013974 RLG00000021856 RLG00000021857 RLG00000021858 RLG00000021859
rosa_multiflora Rmu_sc0000648.1_g000007 Rmu_sc0000648.1_g000009 Rmu_sc0003813.1_g000016 Rmu_sc0009165.1_g000008 Rmu_sc0022554.1_g000001
rosa_roxburghii Rroxscaffold_2G00082200 Rroxscaffold_2G00082230 Rroxscaffold_5G00368960 Rroxscaffold_5G00369010 Rroxscaffold_7G00200390
rosa_rugosa Rorug02G0539500 Rorug02G0539600 Rorug02G0539700 Rorug04G0216400 Rorug04G0216500 Rorug04G0216500 Rorug04G0216600
rosa_samantha Rh2AG610800 Rh2AG611000 Rh2AG611100 Rh2CG592800 Rh2CG593000 Rh2CG593200 Rh2DG634900 Rh2DG635100 Rh2DG635200 Rh2DG635400 Rh4AG272200 Rh4AG272900 Rh4DG275600 Rh4DG276000
rosa_wichuraiana Rw2G050640 Rw2G050660 Rw2G050670 Rw2G050680 Rw4G023610 Rw4G023680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1348
AccB7I CCANNNNNTGG 2 cut(s) 1307, 1661
AccII CGCG 2 cut(s) 369, 1959
AciI CCGC 4 cut(s) 88, 278, 1957, 1959
AclWI GGATC 3 cut(s) 156, 168, 1462
AcoI YGGCCR 2 cut(s) 3, 34
AcsI RAATTY 1 cut(s) 2034
AcuI CTGAAG 2 cut(s) 1426, 1767
AcyI GRCGYC 1 cut(s) 1345
AfaI GTAC 7 cut(s) 735, 943, 1565, 1703, 1736, 1928, 1953
AfiI CCNNNNNNNGG 5 cut(s) 97, 884, 1265, 1307, 1661
AgsI TTSAA 9 cut(s) 123, 431, 548, 849, 992, 1065, 1421, 1604, 1625
AhlI ACTAGT 1 cut(s) 2056
AjnI CCWGG 3 cut(s) 454, 784, 1377
AjuI GAANNNNNNNTTGG 2 cut(s) 177, 209
AleI CACNNNNGTG 1 cut(s) 308
Alw21I GWGCWC 1 cut(s) 339
Alw26I GTCTC 4 cut(s) 344, 546, 1337, 1352
AlwI GGATC 3 cut(s) 156, 168, 1462
AlwNI CAGNNNCTG 1 cut(s) 238
Ama87I CYCGRG 1 cut(s) 1825
AoxI GGCC 3 cut(s) 3, 34, 209
ApeKI GCWGC 5 cut(s) 247, 902, 905, 1400, 1720
ApoI RAATTY 1 cut(s) 2034
Asp700I GAANNNNTTC 1 cut(s) 735
AspLEI GCGC 3 cut(s) 369, 371, 1530
AspS9I GGNCC 2 cut(s) 209, 1899
AsuC2I CCSGG 1 cut(s) 299
AsuHPI GGTGA 1 cut(s) 1606
AvaI CYCGRG 1 cut(s) 1825
AvaII GGWCC 1 cut(s) 1899
BaeGI GKGCMC 1 cut(s) 305
BalI TGGCCA 2 cut(s) 5, 36
BanII GRGCYC 1 cut(s) 339
BarI GAAGNNNNNNTAC 2 cut(s) 1903, 1935
Bbv12I GWGCWC 1 cut(s) 339
BbvI GCAGC 5 cut(s) 234, 892, 914, 1387, 1707
BccI CCATC 6 cut(s) 469, 502, 697, 862, 1305, 1663
BceAI ACGGC 1 cut(s) 483
BciT130I CCWGG 3 cut(s) 456, 786, 1379
BciVI GTATCC 2 cut(s) 1823, 1997
BclI TGATCA 1 cut(s) 1596
BcnI CCSGG 1 cut(s) 299
BcoDI GTCTC 4 cut(s) 344, 546, 1337, 1352
BcuI ACTAGT 1 cut(s) 2056
BfaI CTAG 8 cut(s) 18, 167, 702, 711, 1238, 1451, 2021, 2057
BfmI CTRYAG 2 cut(s) 419, 2085
BfuI GTATCC 2 cut(s) 1823, 1997
BglII AGATCT 1 cut(s) 1933
BisI GCNGC 7 cut(s) 88, 248, 279, 903, 906, 1401, 1721
BlpI GCTNAGC 1 cut(s) 1194
BlsI GCNGC 7 cut(s) 89, 249, 280, 904, 907, 1402, 1722
BmcAI AGTACT 2 cut(s) 735, 1953
Bme1390I CCNGG 4 cut(s) 299, 456, 786, 1379
Bme18I GGWCC 1 cut(s) 1899
BmeT110I CYCGRG 1 cut(s) 1825
BmgT120I GGNCC 2 cut(s) 209, 1899
BmiI GGNNCC 3 cut(s) 210, 490, 1104
BmrFI CCNGG 4 cut(s) 299, 456, 786, 1379
BmrI ACTGGG 1 cut(s) 107
BmsI GCATC 3 cut(s) 883, 1412, 2004
BmuI ACTGGG 1 cut(s) 107
BpmI CTGGAG 2 cut(s) 621, 1378
Bpu1102I GCTNAGC 1 cut(s) 1194
BpuMI CCSGG 1 cut(s) 299
Bsa29I ATCGAT 1 cut(s) 1658
BsaAI YACGTR 1 cut(s) 1734
BsaHI GRCGYC 1 cut(s) 1345
BsaI GGTCTC 1 cut(s) 344
BsaJI CCNNGG 5 cut(s) 6, 91, 298, 1378, 1957
BsaXI ACNNNNNCTCC 2 cut(s) 1017, 1047
Bsc4I CCNNNNNNNGG 5 cut(s) 97, 884, 1265, 1307, 1661
Bse1I ACTGG 6 cut(s) 102, 186, 445, 538, 1361, 1676
Bse3DI GCAATG 2 cut(s) 1395, 1537
BseBI CCWGG 3 cut(s) 456, 786, 1379
BseCI ATCGAT 1 cut(s) 1658
BseDI CCNNGG 5 cut(s) 6, 91, 298, 1378, 1957
BseGI GGATG 5 cut(s) 689, 877, 1146, 1316, 1403
BseLI CCNNNNNNNGG 5 cut(s) 97, 884, 1265, 1307, 1661
BseMI GCAATG 2 cut(s) 1395, 1537
BseMII CTCAG 5 cut(s) 354, 380, 684, 1208, 1515
BseNI ACTGG 6 cut(s) 102, 186, 445, 538, 1361, 1676
BsePI GCGCGC 1 cut(s) 367
BseRI GAGGAG 3 cut(s) 362, 1038, 1558
BseSI GKGCMC 1 cut(s) 305
BseXI GCAGC 5 cut(s) 234, 892, 914, 1387, 1707
BseYI CCCAGC 3 cut(s) 281, 1051, 1129
Bsh1236I CGCG 2 cut(s) 369, 1959
BshFI GGCC 3 cut(s) 5, 36, 211
BshVI ATCGAT 1 cut(s) 1658
BsiHKAI GWGCWC 1 cut(s) 339
BsiHKCI CYCGRG 1 cut(s) 1825
BsiSI CCGG 2 cut(s) 298, 492
BslFI GGGAC 1 cut(s) 298
BslI CCNNNNNNNGG 5 cut(s) 97, 884, 1265, 1307, 1661
BsmAI GTCTC 4 cut(s) 344, 546, 1337, 1352
BsmBI CGTCTC 1 cut(s) 1352
BsmFI GGGAC 1 cut(s) 298
BsmI GAATGC 2 cut(s) 995, 1446
BsnI GGCC 3 cut(s) 5, 36, 211
Bso31I GGTCTC 1 cut(s) 344
BsoBI CYCGRG 1 cut(s) 1825
Bsp1286I GDGCHC 2 cut(s) 305, 339
Bsp143I GATC 8 cut(s) 148, 160, 213, 1454, 1596, 1933, 1974, 2017
Bsp1720I GCTNAGC 1 cut(s) 1194
Bsp19I CCATGG 1 cut(s) 6
BspACI CCGC 4 cut(s) 88, 278, 1957, 1959
BspANI GGCC 3 cut(s) 5, 36, 211
BspCNI CTCAG 5 cut(s) 353, 381, 683, 1207, 1516
BspDI ATCGAT 1 cut(s) 1658
BspFNI CGCG 2 cut(s) 369, 1959
BspLI GGNNCC 3 cut(s) 210, 490, 1104
BspPI GGATC 3 cut(s) 156, 168, 1462
BspTNI GGTCTC 1 cut(s) 344
BsrDI GCAATG 2 cut(s) 1395, 1537
BsrI ACTGG 6 cut(s) 102, 186, 445, 538, 1361, 1676
BssECI CCNNGG 5 cut(s) 6, 91, 298, 1378, 1957
BssHII GCGCGC 1 cut(s) 367
BssMI GATC 8 cut(s) 148, 160, 213, 1454, 1596, 1933, 1974, 2017
BssNI GRCGYC 1 cut(s) 1345
BssT1I CCWWGG 2 cut(s) 6, 91
Bst2UI CCWGG 3 cut(s) 456, 786, 1379
Bst4CI ACNGT 8 cut(s) 42, 157, 307, 379, 649, 952, 1043, 1926
Bst6I CTCTTC 1 cut(s) 648
BstACI GRCGYC 1 cut(s) 1345
BstBAI YACGTR 1 cut(s) 1734
BstC8I GCNNGC 7 cut(s) 55, 326, 335, 369, 617, 686, 1718
BstDEI CTNAG 6 cut(s) 340, 389, 670, 1183, 1194, 1524
BstDSI CCRYGG 2 cut(s) 6, 1957
BstF5I GGATG 5 cut(s) 689, 877, 1146, 1316, 1403
BstFNI CGCG 2 cut(s) 369, 1959
BstHHI GCGC 3 cut(s) 369, 371, 1530
BstKTI GATC 8 cut(s) 151, 163, 216, 1457, 1599, 1936, 1977, 2020
BstMAI GTCTC 4 cut(s) 344, 546, 1337, 1352
BstMBI GATC 8 cut(s) 148, 160, 213, 1454, 1596, 1933, 1974, 2017
BstMWI GCNNNNNNNGC 8 cut(s) 244, 330, 334, 364, 671, 820, 902, 1178
BstNI CCWGG 3 cut(s) 456, 786, 1379
BstNSI RCATGY 1 cut(s) 1332
BstSCI CCNGG 4 cut(s) 297, 454, 784, 1377
BstSFI CTRYAG 2 cut(s) 419, 2085
BstSLI GKGCMC 1 cut(s) 305
BstUI CGCG 2 cut(s) 369, 1959
BstV1I GCAGC 5 cut(s) 234, 892, 914, 1387, 1707
BstX2I RGATCY 1 cut(s) 1933
BstXI CCANNNNNNTGG 1 cut(s) 1137
BstYI RGATCY 1 cut(s) 1933
Bsu15I ATCGAT 1 cut(s) 1658
BsuI GTATCC 2 cut(s) 1823, 1997
BsuRI GGCC 3 cut(s) 5, 36, 211
BsuTUI ATCGAT 1 cut(s) 1658
BtgI CCRYGG 2 cut(s) 6, 1957
BtsCI GGATG 5 cut(s) 689, 877, 1146, 1316, 1403
BtsIMutI CAGTG 8 cut(s) 264, 312, 348, 384, 470, 503, 1669, 1984
Cac8I GCNNGC 7 cut(s) 55, 326, 335, 369, 617, 686, 1718
CaiI CAGNNNCTG 1 cut(s) 238
CfoI GCGC 3 cut(s) 369, 371, 1530
Cfr13I GGNCC 2 cut(s) 209, 1899
Cfr42I CCGCGG 1 cut(s) 1960
ClaI ATCGAT 1 cut(s) 1658
CsiI ACCWGGT 1 cut(s) 784
Csp6I GTAC 7 cut(s) 734, 942, 1564, 1702, 1735, 1927, 1952
CviAII CATG 7 cut(s) 7, 271, 1137, 1329, 1480, 1572, 1810
CviQI GTAC 7 cut(s) 734, 942, 1564, 1702, 1735, 1927, 1952
DdeI CTNAG 6 cut(s) 340, 389, 670, 1183, 1194, 1524
DpnI GATC 8 cut(s) 150, 162, 215, 1456, 1598, 1935, 1976, 2019
DpnII GATC 8 cut(s) 148, 160, 213, 1454, 1596, 1933, 1974, 2017
DraI TTTAAA 1 cut(s) 1324
EaeI YGGCCR 2 cut(s) 3, 34
Eam1104I CTCTTC 1 cut(s) 648
EarI CTCTTC 1 cut(s) 648
Ecl136II GAGCTC 1 cut(s) 337
Eco130I CCWWGG 2 cut(s) 6, 91
Eco24I GRGCYC 1 cut(s) 339
Eco31I GGTCTC 1 cut(s) 344
Eco47I GGWCC 1 cut(s) 1899
Eco53kI GAGCTC 1 cut(s) 337
Eco57I CTGAAG 2 cut(s) 1426, 1767
Eco88I CYCGRG 1 cut(s) 1825
EcoICRI GAGCTC 1 cut(s) 337
EcoRII CCWGG 3 cut(s) 454, 784, 1377
EcoT14I CCWWGG 2 cut(s) 6, 91
EcoT38I GRGCYC 1 cut(s) 339
ErhI CCWWGG 2 cut(s) 6, 91
Esp3I CGTCTC 1 cut(s) 1352
FaeI CATG 7 cut(s) 10, 274, 1140, 1332, 1483, 1575, 1813
FalI AAGNNNNNCTT 2 cut(s) 720, 752
FaqI GGGAC 1 cut(s) 298
FatI CATG 7 cut(s) 6, 270, 1136, 1328, 1479, 1571, 1809
FauI CCCGC 1 cut(s) 1952
FauNDI CATATG 2 cut(s) 592, 741
FbaI TGATCA 1 cut(s) 1596
Fnu4HI GCNGC 7 cut(s) 88, 248, 279, 903, 906, 1401, 1721
FokI GGATG 5 cut(s) 676, 884, 1153, 1323, 1390
FriOI GRGCYC 1 cut(s) 339
Fsp4HI GCNGC 7 cut(s) 88, 248, 279, 903, 906, 1401, 1721
FspBI CTAG 8 cut(s) 18, 167, 702, 711, 1238, 1451, 2021, 2057
GlaI GCGC 3 cut(s) 368, 370, 1529
GluI GCNGC 7 cut(s) 88, 248, 279, 903, 906, 1401, 1721
GsaI CCCAGC 3 cut(s) 285, 1055, 1133
GsuI CTGGAG 2 cut(s) 621, 1378
HaeIII GGCC 3 cut(s) 5, 36, 211
HapII CCGG 2 cut(s) 298, 492
HhaI GCGC 3 cut(s) 369, 371, 1530
Hin1I GRCGYC 1 cut(s) 1345
Hin1II CATG 7 cut(s) 10, 274, 1140, 1332, 1483, 1575, 1813
Hin6I GCGC 3 cut(s) 367, 369, 1528
HinP1I GCGC 3 cut(s) 367, 369, 1528
HindIII AAGCTT 2 cut(s) 186, 1070
HinfI GANTC 3 cut(s) 656, 1061, 1208
HpaII CCGG 2 cut(s) 298, 492
HphI GGTGA 1 cut(s) 1606
Hpy166II GTNNAC 2 cut(s) 539, 1702
Hpy188I TCNGA 2 cut(s) 203, 1525
Hpy188III TCNNGA 9 cut(s) 431, 522, 638, 1058, 1336, 1544, 1557, 1827, 2104
Hpy8I GTNNAC 2 cut(s) 539, 1702
Hpy99I CGWCG 1 cut(s) 1347
HpyAV CCTTC 5 cut(s) 198, 519, 542, 1170, 1993
HpyCH4III ACNGT 8 cut(s) 42, 157, 307, 379, 649, 952, 1043, 1926
HpyCH4IV ACGT 3 cut(s) 513, 1345, 1733
HpyCH4V TGCA 9 cut(s) 358, 446, 908, 960, 1166, 1403, 1716, 2048, 2078
HpyF10VI GCNNNNNNNGC 8 cut(s) 244, 330, 334, 364, 671, 820, 902, 1178
HpyF3I CTNAG 6 cut(s) 340, 389, 670, 1183, 1194, 1524
HpySE526I ACGT 3 cut(s) 513, 1345, 1733
Hsp92I GRCGYC 1 cut(s) 1345
Hsp92II CATG 7 cut(s) 10, 274, 1140, 1332, 1483, 1575, 1813
HspAI GCGC 3 cut(s) 367, 369, 1528
Ksp22I TGATCA 1 cut(s) 1596
KspI CCGCGG 1 cut(s) 1960
Kzo9I GATC 8 cut(s) 148, 160, 213, 1454, 1596, 1933, 1974, 2017
LmnI GCTCC 2 cut(s) 488, 1315
Lsp1109I GCAGC 5 cut(s) 234, 892, 914, 1387, 1707
LweI GCATC 3 cut(s) 883, 1412, 2004
MabI ACCWGGT 1 cut(s) 784
MaeI CTAG 8 cut(s) 18, 167, 702, 711, 1238, 1451, 2021, 2057
MaeII ACGT 3 cut(s) 513, 1345, 1733
MaeIII GTNAC 5 cut(s) 262, 678, 1055, 1759, 1874
MalI GATC 8 cut(s) 150, 162, 215, 1456, 1598, 1935, 1976, 2019
MboI GATC 8 cut(s) 148, 160, 213, 1454, 1596, 1933, 1974, 2017
MboII GAAGA 8 cut(s) 104, 419, 665, 1237, 1432, 1976, 1978, 2033
MflI RGATCY 1 cut(s) 1933
MhlI GDGCHC 2 cut(s) 305, 339
MlsI TGGCCA 2 cut(s) 5, 36
MluCI AATT 7 cut(s) 561, 1120, 1319, 1485, 1492, 2025, 2034
MluNI TGGCCA 2 cut(s) 5, 36
MlyI GAGTC 1 cut(s) 665
Mox20I TGGCCA 2 cut(s) 5, 36
MroXI GAANNNNTTC 1 cut(s) 735
MscI TGGCCA 2 cut(s) 5, 36
MseI TTAA 3 cut(s) 1323, 1391, 1904
MslI CAYNNNNRTG 4 cut(s) 77, 269, 308, 1216
Msp20I TGGCCA 2 cut(s) 5, 36
MspA1I CMGCKG 2 cut(s) 905, 1959
MspI CCGG 2 cut(s) 298, 492
MspR9I CCNGG 4 cut(s) 299, 456, 786, 1379
Mva1269I GAATGC 2 cut(s) 995, 1446
MvaI CCWGG 3 cut(s) 456, 786, 1379
MvnI CGCG 2 cut(s) 369, 1959
MwoI GCNNNNNNNGC 8 cut(s) 244, 330, 334, 364, 671, 820, 902, 1178
NciI CCSGG 1 cut(s) 299
NcoI CCATGG 1 cut(s) 6
NdeI CATATG 2 cut(s) 592, 741
NdeII GATC 8 cut(s) 148, 160, 213, 1454, 1596, 1933, 1974, 2017
NlaIII CATG 7 cut(s) 10, 274, 1140, 1332, 1483, 1575, 1813
NlaIV GGNNCC 3 cut(s) 210, 490, 1104
NmuCI GTSAC 3 cut(s) 262, 1055, 1759
NspI RCATGY 1 cut(s) 1332
OliI CACNNNNGTG 1 cut(s) 308
PauI GCGCGC 1 cut(s) 367
PctI GAATGC 2 cut(s) 995, 1446
PdmI GAANNNNTTC 1 cut(s) 735
PfeI GAWTC 2 cut(s) 1061, 1208
PflMI CCANNNNNTGG 2 cut(s) 1307, 1661
PkrI GCNGC 7 cut(s) 89, 249, 280, 904, 907, 1402, 1722
PleI GAGTC 1 cut(s) 664
PpsI GAGTC 1 cut(s) 664
Ppu21I YACGTR 1 cut(s) 1734
Psp124BI GAGCTC 1 cut(s) 339
Psp6I CCWGG 3 cut(s) 454, 784, 1377
PspFI CCCAGC 3 cut(s) 281, 1051, 1129
PspGI CCWGG 3 cut(s) 454, 784, 1377
PspN4I GGNNCC 3 cut(s) 210, 490, 1104
PspPI GGNCC 2 cut(s) 209, 1899
PsrI GAACNNNNNNTAC 2 cut(s) 1239, 1271
PstNI CAGNNNCTG 1 cut(s) 238
PsuI RGATCY 1 cut(s) 1933
PteI GCGCGC 1 cut(s) 367
PvuII CAGCTG 1 cut(s) 905
RsaI GTAC 7 cut(s) 735, 943, 1565, 1703, 1736, 1928, 1953
RsaNI GTAC 7 cut(s) 734, 942, 1564, 1702, 1735, 1927, 1952
RseI CAYNNNNRTG 4 cut(s) 77, 269, 308, 1216
SacI GAGCTC 1 cut(s) 339
SacII CCGCGG 1 cut(s) 1960
SaqAI TTAA 3 cut(s) 1323, 1391, 1904
SatI GCNGC 7 cut(s) 88, 248, 279, 903, 906, 1401, 1721
Sau3AI GATC 8 cut(s) 148, 160, 213, 1454, 1596, 1933, 1974, 2017
Sau96I GGNCC 2 cut(s) 209, 1899
ScaI AGTACT 2 cut(s) 735, 1953
SchI GAGTC 1 cut(s) 665
ScrFI CCNGG 4 cut(s) 299, 456, 786, 1379
SduI GDGCHC 2 cut(s) 305, 339
SexAI ACCWGGT 1 cut(s) 784
SfaNI GCATC 3 cut(s) 883, 1412, 2004
SfcI CTRYAG 2 cut(s) 419, 2085
Sfr303I CCGCGG 1 cut(s) 1960
SgrBI CCGCGG 1 cut(s) 1960
SinI GGWCC 1 cut(s) 1899
SmiMI CAYNNNNRTG 4 cut(s) 77, 269, 308, 1216
SpeI ACTAGT 1 cut(s) 2056
Sse9I AATT 7 cut(s) 561, 1120, 1319, 1485, 1492, 2025, 2034
SsiI CCGC 4 cut(s) 88, 278, 1957, 1959
SspI AATATT 2 cut(s) 934, 1461
SspMI CTAG 8 cut(s) 18, 167, 702, 711, 1238, 1451, 2021, 2057
SstI GAGCTC 1 cut(s) 339
StyD4I CCNGG 4 cut(s) 297, 454, 784, 1377
StyI CCWWGG 2 cut(s) 6, 91
TaaI ACNGT 8 cut(s) 42, 157, 307, 379, 649, 952, 1043, 1926
TaiI ACGT 3 cut(s) 516, 1348, 1736
TaqI TCGA 9 cut(s) 64, 151, 415, 803, 999, 1543, 1640, 1658, 1989
TasI AATT 7 cut(s) 561, 1120, 1319, 1485, 1492, 2025, 2034
TatI WGTACW 4 cut(s) 733, 941, 1563, 1951
TauI GCSGC 2 cut(s) 90, 281
TfiI GAWTC 2 cut(s) 1061, 1208
Tru1I TTAA 3 cut(s) 1323, 1391, 1904
Tru9I TTAA 3 cut(s) 1323, 1391, 1904
TscAI CASTG 8 cut(s) 271, 312, 348, 384, 477, 510, 1676, 1984
TseFI GTSAC 3 cut(s) 262, 1055, 1759
TseI GCWGC 5 cut(s) 247, 902, 905, 1400, 1720
Tsp45I GTSAC 3 cut(s) 262, 1055, 1759
TspDTI ATGAA 5 cut(s) 728, 771, 888, 956, 1031
TspGWI ACGGA 3 cut(s) 240, 1944, 1958
TspRI CASTG 8 cut(s) 271, 312, 348, 384, 477, 510, 1676, 1984
Van91I CCANNNNNTGG 2 cut(s) 1307, 1661
VpaK11BI GGWCC 1 cut(s) 1899
XapI RAATTY 1 cut(s) 2034
XceI RCATGY 1 cut(s) 1332
XcmI CCANNNNNNNNNTGG 1 cut(s) 1308
XmnI GAANNNNTTC 1 cut(s) 735
XspI CTAG 8 cut(s) 18, 167, 702, 711, 1238, 1451, 2021, 2057
ZraI GACGTC 1 cut(s) 1346
ZrmI AGTACT 2 cut(s) 735, 1953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.