AT4G15236
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
8696677 .. 8702727
6051 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15236.1

Sequence Viewer

Length: 4173 bp
ATGACAATGCCTCAAACAGATGGAGTTGAGTTTGCTTCTAGGAACAATCTTGAAAATGGGGATGGTGATCAGGTTCGGTCTCAATGGGTTGCTATTGAGAGATCACCAACATGTAAAAGAATCACTACTGCTTTGTTCTGCAAAAGAGATGAACAAGGGAAGAGAAGCCAGAGACGAGTCATGGATGTTTCTAAACTTGAGGATCTTGATAGACGCCTGTTTATTGATGAGCTCATCAGACATGTTGAGGATGATAATCGCGTCTTATTGCAAAAGATTAGGACAAGAACTGACGAGGTTGGAATTGATTTACCAAAGATTGAAGTGAGGTTCAGTGATCTTTTTGTCGAAGCAGAGTGTGAGGTTGTTCATGGAAAGCCTATCCCAACTCTTTGGAATGCTATTGCAAGCAAACTATCAAGATTCACGTTTTCAAAACAAGAAGATAAGATAAGTATCTTGAAAGGTGTCAGTGGCATCATAAGGCCTAAAAGAATGACTTTGTTGCTTGGTCCTCCTGGTTGTGGTAAAACCACTCTACTACTCGCACTATCTGGAAGACTAGACCCTTCTTTAAAGACTAGAGGAGAAGTTAGTTACAATGGTCACTTATTTTCGGAGTTTGTTCCTGAGAAAACATCGAGCTATGTAAGTCAAAATGATTTGCATATTCCAGAGCTTAGTGTGAGAGAGACACTCGATTTTTCTGGATGTTTTCAAGGCGCGGGAAGCCGTTTAGAAATGATGAAAGAGATTAGTAGAAGGGAGAAACTGAAAGGAATAGTTCCAGATCCTGATATTGATGCATACATGAAGGCAGCTTCTATTGAGGGTTCAAAAACAAATCTGCAAACCGACTATATCTTAAAAATCCTAGGACTCACTATCTGTGCAGATACACGTGTTGGAGATGCTTCGAGACCAGGAATATCTGGTGGCCAAAAGAGAAGATTAACTACAGGTGAGATGATTGTAGGTCCAATCAAAACTCTGTTCATGGATGAAATATCGAATGGTTTGGATAGTTCAACTACATTCCAGATTCTATCATGTCTCCAACAGTTTGCACGTCTATCTGAAGGAACCATATTGGTTTCACTGCTTCAGCCTGCACCAGAAACGTTTGAGCTTTTCGACGATTTGATTCTTATGGGAGAAGGAAAGATAATCTATCACGGTCCACGGGATTTTATATGTAGTTTCTTTGAGGATTGTGGATTTAAATGTCCACAGAGGAAATCTGTTGCTGAATTCCTTCAGGAGGTTATCTCAAGGAAAGATCAAGAACAATATTGGTGTCACAGAGACAAACCATATTGCTATGTCTCTATTGATTCATTTATTGAGAAATTTAAAAAGTCTGATCTTGGGCTACAACTACAAGACGAACTCTCCAAGACATATGACAAGTCTCAGACTCAAAAGGATGGACTGTGCATTAGAAAATACTCACTTAGTAACTGGGATATGTTTAAAGCTTGCTCAAGGAGAGAATTTCTTCTGATGAAACGTAACTCTTTCGTTTACGTATTCAAATCTGGACTTTTAATATTCATTGGATCCATTGCAATGACTGTTTATCTACGGACTGGGTCTACAAGAGATTCTCTTCATGCTAATTATCTTTTGGGTTCTTTGTTCTTTTCCCTCATTAAACTTCTTGCTGATGGACTACCAGAACTCACATTGACAGTCTCGAGAATTGCGGTGTTCTGCAAACAAAAAGAGTTATACTTTTATCCTGCTTGGGCATATGCTATTCCTTCTGCTATTTTAAAGATACCGATTTCATTTCTTGAATCATTCCTCTGGACAATGTTGACATATTATGTCATTGGTTACAGTCCTGAGGCGGGAAGGTTCATTCGCCAGGTCTTGATCTTATTTGCTCTACACCTTTCGTGTATATCGATGTTCCGTGCTATAGGTGCTGTCTTTCGAGATTTTGATGTTGCCACTACCATTGGAAGCATCTCTATAGTGCTTCTCTCAGTATTCGGAGGTTTCATTGTTCGAAAACCCTCAATGCCTTCTTGGCTTGAGTGGGGATTCTGGCTTTCTCCACTGTCATATGCTGAGATTGGTCTAACCTCAAATGAATTTTTCGCTCCAATGTGGAGGAAGATGACATCTGAAAACAGAACTTTGGGGGAACAAGTTCTAGATGCTCGCGGGTTGAATTTTGGAAATCAATCTTACTGGAATGCATTTGGCGCATTGATTGGCTTCACACTCTTCTTCAATACTGTTTTTGCACTGGCCTTGACCTTTTTGAAGACTTCACAGAGGTCTCGTGTAATTGTTTCTCATGACAAGAACACTCAAAGCTCAGAGAAAGATTCTAAAATTGCTTCCCATTCCAAAAATGCATTGCCTTTCGAACCTCTAACTTTCACATTTCAAGACGTACAATATTTTATTGAGACTCCTCAGGGAAAGAAGCTGCAGCTTCTCTCTGACGTTACAGGTGCATTCAAGCCCGGTGTTCTCACTGCTCTAATGGGTGTGAGTGGCGCTGGTAAAACGACTCTGCTTGACGTTCTCTCAGGAAGGAAAACCCGCGGTGACATTAAAGGACAGATTGAAGTAGGCGGTTACGTTAAGGTTCAAGACACATTTTCGCGGGTTTCAGGTTATTGTGAACAGTTTGATATCCATTCTCCCAACTTAACAGTCCAAGAGTCCCTGAAATACTCTGCTTGGCTTCGACTTCCTTGTAACATTAGTTCAGAAACTAAGAGTGCAATAGTTAATGAAGTTCTTGAGACGATAGAGCTTGAGGAGATTAAAGATTCCTTAGTAGGAGTTCCTGGAATTAGCGGTGTAACAGCAGAACAACGCAAAAGACTAACAATAGCTGTGGAGCTTGTTTCCAATCCTTCAATAATATTTATGGATGAACCAACCACAGGATTAGATGCAAGAGCTGCAGCAATTGTAATGAGAGCTGTGAAGAACATCGCCGAGACTGGCAGAACTGTTGTTTGCACAATTCACCAGCCGAGCATAGATATCTTTGAGGCATTTGATGAGCTGATTCTGATGAAAAATGGAGGAAAGATTATCTATTACGGACCTCTTGGACAACATTCAAGCAAAGTTATTGAATACTTTATGAGCATTCCTGGAGTTCCAAAACTGAAAGAAAACTCTAACCCAGCCACTTGGATACTTGACATTACTTCTAAATCATCAGAAGACAAACTTGGTGTTGATTTGGCACATATATACGAGGAATCGACTTTGTTTAAGGAGAACAAAATGGTAATTGAGCAAACGAGATGTACATCTTTGGGATCAGAAAGATTAATCTTGTCATCACGTTATGCTCAAACGAGTTGGGAACAATTCAAAGCATGCCTCTGGAAACAACATCTCTCTTATTGGAGAAACCCTTCCTACAATCTCACTCGCATCATTTTCATGTGTTTTACTTGTATGCTCTGTGGCATTCTTTTCTTGCAAAAAGCTAAGGAAATAAACAATCAGCAAGATCTATTCAACGTCTTTGGCTCAATGTTTACGGTGGTTCTATTCTCTGGAATAAACAATTGCTCAACAGTGATATTTTGCGTTGCAACCGAACGAAATGTCTTCTACCGCGAAAGATTTTCCCGTATGTACAACCCATGGGCGTATTCCCTTGCTCAGGTGTTGGTTGAAATTCCATACTCATTGTTCCAATCTATTATATATGTGATAATCGTATATCCTATGGTTGGCTATCACTGGTCGGTCTACAAAGTGTTTTGGAGCTTCTACTCAATTTTCTGCTCCTTGCTTATCTTCAACTATTTCGGCATGCTTTTAGTTGTGGTGACCCCAAACGTTCACATTGCTTTTACTCTCCGCTCTTCATTTTACGCAATCGTCAATCTCTTTGCTGGTTATGTCATGCCAAAACCTAACATTCCGAGATGGTGGATTTGGATGTATTACTTGAGCCCGACGTCATGGGTTTTGAACGGATTGCTCACATCGCAGTATGGAGATATGGAGAAAGAGATATTAGCGTTTGGAGAGAAGAAGAAAGTTTCAGCTTTCTTGGAAGATTATTTTGGCTACAGATATGACTCTCTGGCTCTTGTAGCTGTTGTTCTTATTGCCTTCCCCATTCTCTTGGCATCTCTTTTTGCCTTCTTCATTGGTAAACTCAATTTCCAAAAGAAGTGA

Protein Analysis

1390

Amino Acids

157.62

Weight (kDa)

8.57

Isoelectric Point (pI)

42.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 154 - 336 6.7e-17 ABC transporter
ABC2_membrane PF01061 491 - 701 6.2e-43 ABC-2 type transporter
ABC2_membrane_3 PF12698 598 - 752 2.7e-06 ABC-2 family transporter protein
PDR_assoc PF08370 706 - 768 2.2e-20 Plant PDR ABC transporter associated
ABC_tran PF00005 818 - 970 2.8e-19 ABC transporter
ABC2_membrane_7 PF19055 999 - 1061 2.1e-06 ABC-2 type transporter
ABC2_membrane PF01061 1115 - 1329 9.8e-58 ABC-2 type transporter
ABC2_membrane_3 PF12698 1162 - 1378 2.9e-06 ABC-2 family transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15230 AT4G15230 AT4G15230 AT4G15230 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15236
fragaria_vesca FvH4_4g21360 FvH4_4g21360 FvH4_4g21390 FvH4_6g49431 FvH4_6g49450
malus_domestica MD09G1044300.v1.1 MD16G1137900.v1.1 MD16G1138000.v1.1
prunus_persica Prupe.1G106800_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.3G273300_v2.0.a1
pyrus_communis pycom111g03460 pycom16g12210
rosa_chinensis RchiOBHm_Chr2g0169331 RchiOBHm_Chr2g0169361 RchiOBHm_Chr2g0169371 RchiOBHm_Chr2g0169381 RchiOBHm_Chr2g0169411 RchiOBHm_Chr4g0427141 RchiOBHm_Chr4g0427321
rosa_laevigata RLG00000007252 RLG00000007258 RLG00000013974 RLG00000021856 RLG00000021857 RLG00000021858 RLG00000021859
rosa_multiflora Rmu_sc0000648.1_g000007 Rmu_sc0000648.1_g000009 Rmu_sc0003813.1_g000016 Rmu_sc0009165.1_g000008 Rmu_sc0022554.1_g000001
rosa_roxburghii Rroxscaffold_2G00082200 Rroxscaffold_2G00082230 Rroxscaffold_5G00368960 Rroxscaffold_5G00369010 Rroxscaffold_7G00200390
rosa_rugosa Rorug02G0539500 Rorug02G0539600 Rorug02G0539700 Rorug04G0216400 Rorug04G0216500 Rorug04G0216500 Rorug04G0216600
rosa_samantha Rh2AG610800 Rh2AG611000 Rh2AG611100 Rh2CG592800 Rh2CG593000 Rh2CG593200 Rh2DG634900 Rh2DG635100 Rh2DG635200 Rh2DG635400 Rh4AG272200 Rh4AG272900 Rh4DG275600 Rh4DG276000
rosa_wichuraiana Rw2G050640 Rw2G050660 Rw2G050670 Rw2G050680 Rw4G023610 Rw4G023680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 3953
AccBSI CCGCTC 1 cut(s) 3852
AccI GTMKAC 2 cut(s) 1595, 3738
AccII CGCG 6 cut(s) 261, 725, 2172, 2562, 2623, 3603
AclI AACGTT 2 cut(s) 1121, 3828
AclWI GGATC 5 cut(s) 210, 785, 1554, 1567, 3304
AcoI YGGCCR 1 cut(s) 937
AcsI RAATTY 6 cut(s) 1250, 1349, 1493, 2099, 2179, 3663
AcuI CTGAAG 3 cut(s) 1088, 1098, 1241
AcvI CACGTG 1 cut(s) 902
AcyI GRCGYC 2 cut(s) 214, 3950
AfaI GTAC 3 cut(s) 2409, 3286, 3623
AfiI CCNNNNNNNGG 6 cut(s) 524, 1261, 1853, 2909, 3649, 3719
AflIII ACRYGT 4 cut(s) 110, 241, 899, 901
AjiI CACGTC 1 cut(s) 1070
AjnI CCWGG 5 cut(s) 517, 922, 1869, 2809, 3124
AjuI GAANNNNNNNTTGG 4 cut(s) 3189, 3221, 4041, 4073
Alw21I GWGCWC 1 cut(s) 234
AlwI GGATC 5 cut(s) 210, 785, 1554, 1567, 3304
AlwNI CAGNNNCTG 1 cut(s) 794
Ama87I CYCGRG 1 cut(s) 1696
AoxI GGCC 3 cut(s) 485, 937, 2259
ApeKI GCWGC 5 cut(s) 818, 2443, 2446, 2927, 2930
ApoI RAATTY 6 cut(s) 1250, 1349, 1493, 2099, 2179, 3663
ArsI GACNNNNNNTTYG 2 cut(s) 3576, 3608
AseI ATTAAT 1 cut(s) 3308
Asp700I GAANNNNTTC 4 cut(s) 1254, 1497, 2157, 3394
AspA2I CCTAGG 1 cut(s) 874
AspLEI GCGC 3 cut(s) 725, 2216, 2516
AspS9I GGNCC 4 cut(s) 512, 977, 1178, 3074
AsuC2I CCSGG 1 cut(s) 2481
AsuHPI GGTGA 6 cut(s) 77, 96, 974, 2576, 2987, 3829
AsuII TTCGAA 2 cut(s) 2014, 2379
AvaI CYCGRG 1 cut(s) 1696
AvaII GGWCC 4 cut(s) 512, 977, 1178, 3074
AvrII CCTAGG 1 cut(s) 874
AxyI CCTNAGG 2 cut(s) 1848, 2430
BaeI ACNNNNGTAYC 2 cut(s) 888, 921
BalI TGGCCA 1 cut(s) 939
BamHI GGATCC 1 cut(s) 1559
BanII GRGCYC 2 cut(s) 234, 3947
BarI GAAGNNNNNNTAC 2 cut(s) 940, 972
BauI CACGAG 1 cut(s) 2292
BbrPI CACGTG 1 cut(s) 902
BbsI GAAGAC 4 cut(s) 565, 2282, 3204, 3586
Bbv12I GWGCWC 1 cut(s) 234
BbvI GCAGC 5 cut(s) 830, 2430, 2458, 2914, 2942
BccI CCATC 5 cut(s) 14, 56, 1421, 1661, 3912
BceAI ACGGC 1 cut(s) 717
BciT130I CCWGG 5 cut(s) 519, 924, 1871, 2811, 3126
BciVI GTATCC 1 cut(s) 3162
BclI TGATCA 1 cut(s) 67
BcnI CCSGG 1 cut(s) 2481
BfaI CTAG 5 cut(s) 39, 563, 582, 875, 2162
BfmI CTRYAG 6 cut(s) 957, 1923, 1977, 2444, 2928, 4063
BfoI RGCGCY 1 cut(s) 2517
BfuI GTATCC 1 cut(s) 3162
BglI GCCNNNNNGGC 1 cut(s) 2035
BglII AGATCT 1 cut(s) 3493
BisI GCNGC 5 cut(s) 819, 2444, 2447, 2928, 2931
BlnI CCTAGG 1 cut(s) 874
BlsI GCNGC 5 cut(s) 820, 2445, 2448, 2929, 2932
Bme1390I CCNGG 6 cut(s) 519, 924, 1871, 2481, 2811, 3126
Bme18I GGWCC 4 cut(s) 512, 977, 1178, 3074
BmeT110I CYCGRG 1 cut(s) 1696
BmgBI CACGTC 1 cut(s) 1070
BmgT120I GGNCC 4 cut(s) 512, 977, 1178, 3074
BmiI GGNNCC 2 cut(s) 1084, 1561
BmrFI CCNGG 6 cut(s) 519, 924, 1871, 2481, 2811, 3126
BmrI ACTGGG 2 cut(s) 1471, 1599
BmsI GCATC 8 cut(s) 486, 793, 901, 1980, 2155, 2908, 3423, 4133
BmuI ACTGGG 2 cut(s) 1471, 1599
BpiI GAAGAC 4 cut(s) 565, 2282, 3204, 3586
BplI GAGNNNNNCTC 4 cut(s) 681, 713, 1253, 1285
BpmI CTGGAG 1 cut(s) 3147
Bpu10I CCTNAGC 2 cut(s) 3471, 3648
Bpu14I TTCGAA 2 cut(s) 2014, 2379
BpuEI CTTGAG 7 cut(s) 218, 1255, 1468, 2060, 2783, 2798, 3961
BpuMI CCSGG 1 cut(s) 2481
Bsa29I ATCGAT 1 cut(s) 1910
BsaAI YACGTR 2 cut(s) 902, 1528
BsaBI GATNNNNATC 4 cut(s) 66, 255, 455, 3286
BsaHI GRCGYC 2 cut(s) 214, 3950
BsaI GGTCTC 3 cut(s) 84, 913, 2295
BsaJI CCNNGG 4 cut(s) 874, 1181, 2560, 3629
BsaXI ACNNNNNCTCC 2 cut(s) 1376, 1406
Bsc4I CCNNNNNNNGG 6 cut(s) 524, 1261, 1853, 2909, 3649, 3719
Bse1I ACTGG 6 cut(s) 1466, 1594, 2204, 2262, 2974, 3734
Bse21I CCTNAGG 2 cut(s) 1848, 2430
Bse3DI GCAATG 4 cut(s) 1563, 1575, 2369, 3834
Bse8I GATNNNNATC 4 cut(s) 66, 255, 455, 3286
BseBI CCWGG 5 cut(s) 519, 924, 1871, 2811, 3126
BseCI ATCGAT 1 cut(s) 1910
BseDI CCNNGG 4 cut(s) 874, 1181, 2560, 3629
BseGI GGATG 8 cut(s) 67, 190, 256, 716, 1006, 1432, 2902, 3936
BseJI GATNNNNATC 4 cut(s) 66, 255, 455, 3286
BseLI CCNNNNNNNGG 6 cut(s) 524, 1261, 1853, 2909, 3649, 3719
BseMI GCAATG 4 cut(s) 1563, 1575, 2369, 3834
BseMII CTCAG 9 cut(s) 621, 1427, 1839, 2004, 2067, 2343, 2444, 2559, 3662
BseNI ACTGG 6 cut(s) 1466, 1594, 2204, 2262, 2974, 3734
BseRI GAGGAG 3 cut(s) 600, 2418, 2795
BseXI GCAGC 5 cut(s) 830, 2430, 2458, 2914, 2942
BseYI CCCAGC 1 cut(s) 3157
BsgI GTGCAG 2 cut(s) 912, 1095
Bsh1236I CGCG 6 cut(s) 261, 725, 2172, 2562, 2623, 3603
BshFI GGCC 3 cut(s) 487, 939, 2261
BshVI ATCGAT 1 cut(s) 1910
BsiHKAI GWGCWC 1 cut(s) 234
BsiHKCI CYCGRG 1 cut(s) 1696
BsiSI CCGG 1 cut(s) 2481
BslFI GGGAC 1 cut(s) 2668
BslI CCNNNNNNNGG 6 cut(s) 524, 1261, 1853, 2909, 3649, 3719
BsmBI CGTCTC 2 cut(s) 166, 2759
BsmFI GGGAC 1 cut(s) 2668
BsmI GAATGC 5 cut(s) 403, 2209, 2471, 3120, 3450
BsnI GGCC 3 cut(s) 487, 939, 2261
Bso31I GGTCTC 3 cut(s) 84, 913, 2295
BsoBI CYCGRG 1 cut(s) 1696
Bsp119I TTCGAA 2 cut(s) 2014, 2379
Bsp1286I GDGCHC 2 cut(s) 234, 3947
Bsp1407I TGTACA 2 cut(s) 3284, 3621
Bsp19I CCATGG 1 cut(s) 3629
BspANI GGCC 3 cut(s) 487, 939, 2261
BspCNI CTCAG 9 cut(s) 622, 1426, 1840, 2003, 2068, 2342, 2443, 2558, 3661
BspDI ATCGAT 1 cut(s) 1910
BspFNI CGCG 6 cut(s) 261, 725, 2172, 2562, 2623, 3603
BspHI TCATGA 1 cut(s) 2308
BspLI GGNNCC 2 cut(s) 1084, 1561
BspMAI CTGCAG 2 cut(s) 2448, 2932
BspPI GGATC 5 cut(s) 210, 785, 1554, 1567, 3304
BspQI GCTCTTC 1 cut(s) 3859
BspT104I TTCGAA 2 cut(s) 2014, 2379
BspTNI GGTCTC 3 cut(s) 84, 913, 2295
BsrBI CCGCTC 1 cut(s) 3852
BsrDI GCAATG 4 cut(s) 1563, 1575, 2369, 3834
BsrGI TGTACA 2 cut(s) 3284, 3621
BsrI ACTGG 6 cut(s) 1466, 1594, 2204, 2262, 2974, 3734
BssECI CCNNGG 4 cut(s) 874, 1181, 2560, 3629
BssNI GRCGYC 2 cut(s) 214, 3950
BssSI CACGAG 1 cut(s) 2292
BssT1I CCWWGG 2 cut(s) 874, 3629
Bst2BI CACGAG 1 cut(s) 2292
Bst2UI CCWGG 5 cut(s) 519, 924, 1871, 2811, 3126
Bst6I CTCTTC 4 cut(s) 155, 1614, 2240, 3859
BstACI GRCGYC 2 cut(s) 214, 3950
BstAPI GCANNNNNTGC 1 cut(s) 2927
BstAUI TGTACA 2 cut(s) 3284, 3621
BstBAI YACGTR 2 cut(s) 902, 1528
BstBI TTCGAA 2 cut(s) 2014, 2379
BstC8I GCNNGC 6 cut(s) 409, 1110, 1480, 2170, 3358, 3803
BstDSI CCRYGG 3 cut(s) 1181, 2560, 3629
BstEII GGTNACC 1 cut(s) 3817
BstENI CCTNNNNNAGG 2 cut(s) 1259, 3647
BstF5I GGATG 8 cut(s) 67, 190, 256, 716, 1006, 1432, 2902, 3936
BstFNI CGCG 6 cut(s) 261, 725, 2172, 2562, 2623, 3603
BstH2I RGCGCY 1 cut(s) 2517
BstHHI GCGC 3 cut(s) 725, 2216, 2516
BstMWI GCNNNNNNNGC 7 cut(s) 729, 1928, 2035, 2213, 2927, 3979, 4088
BstNI CCWGG 5 cut(s) 519, 924, 1871, 2811, 3126
BstNSI RCATGY 4 cut(s) 114, 245, 3360, 3805
BstPI GGTNACC 1 cut(s) 3817
BstSCI CCNGG 6 cut(s) 517, 922, 1869, 2479, 2809, 3124
BstSFI CTRYAG 6 cut(s) 957, 1923, 1977, 2444, 2928, 4063
BstSNI TACGTA 1 cut(s) 1528
BstUI CGCG 6 cut(s) 261, 725, 2172, 2562, 2623, 3603
BstV1I GCAGC 5 cut(s) 830, 2430, 2458, 2914, 2942
BstV2I GAAGAC 4 cut(s) 565, 2282, 3204, 3586
BstX2I RGATCY 4 cut(s) 202, 790, 1559, 3493
BstXI CCANNNNNNTGG 3 cut(s) 393, 3165, 4120
BstYI RGATCY 4 cut(s) 202, 790, 1559, 3493
Bsu15I ATCGAT 1 cut(s) 1910
Bsu36I CCTNAGG 2 cut(s) 1848, 2430
BsuI GTATCC 1 cut(s) 3162
BsuRI GGCC 3 cut(s) 487, 939, 2261
BsuTUI ATCGAT 1 cut(s) 1910
BtgI CCRYGG 3 cut(s) 1181, 2560, 3629
BtgZI GCGATG 2 cut(s) 2944, 3963
BtrI CACGTC 1 cut(s) 1070
BtsCI GGATG 8 cut(s) 67, 190, 256, 716, 1006, 1432, 2902, 3936
BtsI GCAGTG 2 cut(s) 1097, 2490
BtsIMutI CAGTG 8 cut(s) 340, 478, 1097, 2063, 2255, 2490, 3567, 3727
Cac8I GCNNGC 6 cut(s) 409, 1110, 1480, 2170, 3358, 3803
CaiI CAGNNNCTG 1 cut(s) 794
CciI TCATGA 1 cut(s) 2308
CfoI GCGC 3 cut(s) 725, 2216, 2516
Cfr13I GGNCC 4 cut(s) 512, 977, 1178, 3074
Cfr42I CCGCGG 1 cut(s) 2563
ClaI ATCGAT 1 cut(s) 1910
CseI GACGC 2 cut(s) 222, 250
Csp6I GTAC 3 cut(s) 2408, 3285, 3622
CspCI CAANNNNNGTGG 4 cut(s) 1945, 1980, 2841, 2876
CviQI GTAC 3 cut(s) 2408, 3285, 3622
DraI TTTAAA 5 cut(s) 576, 1222, 1354, 1474, 1776
EaeI YGGCCR 1 cut(s) 937
Eam1104I CTCTTC 4 cut(s) 155, 1614, 2240, 3859
EarI CTCTTC 4 cut(s) 155, 1614, 2240, 3859
Ecl136II GAGCTC 1 cut(s) 232
Eco105I TACGTA 1 cut(s) 1528
Eco130I CCWWGG 2 cut(s) 874, 3629
Eco147I AGGCCT 1 cut(s) 487
Eco24I GRGCYC 2 cut(s) 234, 3947
Eco31I GGTCTC 3 cut(s) 84, 913, 2295
Eco32I GATATC 2 cut(s) 2653, 3013
Eco47I GGWCC 4 cut(s) 512, 977, 1178, 3074
Eco53kI GAGCTC 1 cut(s) 232
Eco57I CTGAAG 3 cut(s) 1088, 1098, 1241
Eco72I CACGTG 1 cut(s) 902
Eco81I CCTNAGG 2 cut(s) 1848, 2430
Eco88I CYCGRG 1 cut(s) 1696
Eco91I GGTNACC 1 cut(s) 3817
EcoICRI GAGCTC 1 cut(s) 232
EcoNI CCTNNNNNAGG 2 cut(s) 1259, 3647
EcoO65I GGTNACC 1 cut(s) 3817
EcoRI GAATTC 1 cut(s) 1250
EcoRII CCWGG 5 cut(s) 517, 922, 1869, 2809, 3124
EcoRV GATATC 2 cut(s) 2653, 3013
EcoT14I CCWWGG 2 cut(s) 874, 3629
EcoT22I ATGCAT 3 cut(s) 808, 2209, 2371
EcoT38I GRGCYC 2 cut(s) 234, 3947
ErhI CCWWGG 2 cut(s) 874, 3629
Esp3I CGTCTC 2 cut(s) 166, 2759
FalI AAGNNNNNCTT 4 cut(s) 484, 516, 3189, 3221
FaqI GGGAC 1 cut(s) 2668
FauI CCCGC 5 cut(s) 718, 1846, 2165, 2567, 2616
FauNDI CATATG 3 cut(s) 1402, 1753, 2071
FbaI TGATCA 1 cut(s) 67
FblI GTMKAC 2 cut(s) 1595, 3738
Fnu4HI GCNGC 5 cut(s) 819, 2444, 2447, 2928, 2931
FokI GGATG 8 cut(s) 74, 197, 263, 723, 1013, 1439, 2909, 3943
FriOI GRGCYC 2 cut(s) 234, 3947
Fsp4HI GCNGC 5 cut(s) 819, 2444, 2447, 2928, 2931
FspBI CTAG 5 cut(s) 39, 563, 582, 875, 2162
GlaI GCGC 3 cut(s) 724, 2215, 2515
GluI GCNGC 5 cut(s) 819, 2444, 2447, 2928, 2931
GsaI CCCAGC 1 cut(s) 3161
GsuI CTGGAG 1 cut(s) 3147
HaeII RGCGCY 1 cut(s) 2517
HaeIII GGCC 3 cut(s) 487, 939, 2261
HapII CCGG 1 cut(s) 2481
HgaI GACGC 2 cut(s) 222, 250
HhaI GCGC 3 cut(s) 725, 2216, 2516
Hin1I GRCGYC 2 cut(s) 214, 3950
Hin6I GCGC 3 cut(s) 723, 2214, 2514
HinP1I GCGC 3 cut(s) 723, 2214, 2514
HincII GTYRAC 1 cut(s) 1821
HindII GTYRAC 1 cut(s) 1821
HindIII AAGCTT 1 cut(s) 1476
HpaII CCGG 1 cut(s) 2481
HphI GGTGA 6 cut(s) 77, 96, 974, 2576, 2987, 3829
Hpy99I CGWCG 2 cut(s) 1139, 3952
HpyF10VI GCNNNNNNNGC 7 cut(s) 729, 1928, 2035, 2213, 2927, 3979, 4088
Hsp92I GRCGYC 2 cut(s) 214, 3950
HspAI GCGC 3 cut(s) 723, 2214, 2514
Ksp22I TGATCA 1 cut(s) 67
KspI CCGCGG 1 cut(s) 2563
LguI GCTCTTC 1 cut(s) 3859
LmnI GCTCC 4 cut(s) 2113, 2863, 3753, 3779
Lsp1109I GCAGC 5 cut(s) 830, 2430, 2458, 2914, 2942
LweI GCATC 8 cut(s) 486, 793, 901, 1980, 2155, 2908, 3423, 4133
MaeI CTAG 5 cut(s) 39, 563, 582, 875, 2162
MbiI CCGCTC 1 cut(s) 3852
MfeI CAATTG 2 cut(s) 2934, 3550
MflI RGATCY 4 cut(s) 202, 790, 1559, 3493
MhlI GDGCHC 2 cut(s) 234, 3947
MlsI TGGCCA 1 cut(s) 939
MluNI TGGCCA 1 cut(s) 939
MlyI GAGTC 7 cut(s) 186, 873, 1411, 2419, 2521, 2690, 4067
MmeI TCCRAC 3 cut(s) 280, 886, 1081
Mox20I TGGCCA 1 cut(s) 939
Mph1103I ATGCAT 3 cut(s) 808, 2209, 2371
MroXI GAANNNNTTC 4 cut(s) 1254, 1497, 2157, 3394
MscI TGGCCA 1 cut(s) 939
MslI CAYNNNNRTG 3 cut(s) 109, 1568, 3422
Msp20I TGGCCA 1 cut(s) 939
MspA1I CMGCKG 1 cut(s) 2562
MspI CCGG 1 cut(s) 2481
MspR9I CCNGG 6 cut(s) 519, 924, 1871, 2481, 2811, 3126
MunI CAATTG 2 cut(s) 2934, 3550
Mva1269I GAATGC 5 cut(s) 403, 2209, 2471, 3120, 3450
MvaI CCWGG 5 cut(s) 519, 924, 1871, 2811, 3126
MvnI CGCG 6 cut(s) 261, 725, 2172, 2562, 2623, 3603
MwoI GCNNNNNNNGC 7 cut(s) 729, 1928, 2035, 2213, 2927, 3979, 4088
NciI CCSGG 1 cut(s) 2481
NcoI CCATGG 1 cut(s) 3629
NdeI CATATG 3 cut(s) 1402, 1753, 2071
NlaIV GGNNCC 2 cut(s) 1084, 1561
NmeAIII GCCGAG 2 cut(s) 2989, 3027
NmuCI GTSAC 4 cut(s) 605, 1298, 2564, 3817
NsiI ATGCAT 3 cut(s) 808, 2209, 2371
NspI RCATGY 4 cut(s) 114, 245, 3360, 3805
NspV TTCGAA 2 cut(s) 2014, 2379
PaeI GCATGC 2 cut(s) 3360, 3805
PaeR7I CTCGAG 1 cut(s) 1696
PagI TCATGA 1 cut(s) 2308
PceI AGGCCT 1 cut(s) 487
PciI ACATGT 2 cut(s) 110, 241
PciSI GCTCTTC 1 cut(s) 3859
PcsI WCGNNNNNNNCGW 1 cut(s) 1907
PctI GAATGC 5 cut(s) 403, 2209, 2471, 3120, 3450
PdmI GAANNNNTTC 4 cut(s) 1254, 1497, 2157, 3394
PflFI GACNNNGTC 1 cut(s) 1591
PfoI TCCNGGA 2 cut(s) 2809, 3124
PkrI GCNGC 5 cut(s) 820, 2445, 2448, 2929, 2932
PleI GAGTC 7 cut(s) 185, 873, 1411, 2419, 2521, 2689, 4067
PmaCI CACGTG 1 cut(s) 902
PmlI CACGTG 1 cut(s) 902
PpsI GAGTC 7 cut(s) 185, 873, 1411, 2419, 2521, 2689, 4067
Ppu21I YACGTR 2 cut(s) 902, 1528
PscI ACATGT 2 cut(s) 110, 241
PshBI ATTAAT 1 cut(s) 3308
Psp124BI GAGCTC 1 cut(s) 234
Psp1406I AACGTT 2 cut(s) 1121, 3828
Psp6I CCWGG 5 cut(s) 517, 922, 1869, 2809, 3124
PspCI CACGTG 1 cut(s) 902
PspEI GGTNACC 1 cut(s) 3817
PspFI CCCAGC 1 cut(s) 3157
PspGI CCWGG 5 cut(s) 517, 922, 1869, 2809, 3124
PspN4I GGNNCC 2 cut(s) 1084, 1561
PspPI GGNCC 4 cut(s) 512, 977, 1178, 3074
PsrI GAACNNNNNNTAC 4 cut(s) 2710, 2742, 4080, 4112
PstI CTGCAG 2 cut(s) 2448, 2932
PstNI CAGNNNCTG 1 cut(s) 794
PsuI RGATCY 4 cut(s) 202, 790, 1559, 3493
PsyI GACNNNGTC 1 cut(s) 1591
RsaI GTAC 3 cut(s) 2409, 3286, 3623
RsaNI GTAC 3 cut(s) 2408, 3285, 3622
RseI CAYNNNNRTG 3 cut(s) 109, 1568, 3422
SacI GAGCTC 1 cut(s) 234
SacII CCGCGG 1 cut(s) 2563
SapI GCTCTTC 1 cut(s) 3859
SatI GCNGC 5 cut(s) 819, 2444, 2447, 2928, 2931
Sau96I GGNCC 4 cut(s) 512, 977, 1178, 3074
SchI GAGTC 7 cut(s) 186, 873, 1411, 2419, 2521, 2690, 4067
ScrFI CCNGG 6 cut(s) 519, 924, 1871, 2481, 2811, 3126
SduI GDGCHC 2 cut(s) 234, 3947
SfaNI GCATC 8 cut(s) 486, 793, 901, 1980, 2155, 2908, 3423, 4133
SfcI CTRYAG 6 cut(s) 957, 1923, 1977, 2444, 2928, 4063
Sfr274I CTCGAG 1 cut(s) 1696
Sfr303I CCGCGG 1 cut(s) 2563
SfuI TTCGAA 2 cut(s) 2014, 2379
SgrBI CCGCGG 1 cut(s) 2563
SinI GGWCC 4 cut(s) 512, 977, 1178, 3074
SlaI CTCGAG 1 cut(s) 1696
SmiI ATTTAAAT 1 cut(s) 1222
SmiMI CAYNNNNRTG 3 cut(s) 109, 1568, 3422
SmlI CTYRAG 8 cut(s) 197, 1270, 1483, 1696, 2039, 2762, 2777, 3940
SmoI CTYRAG 8 cut(s) 197, 1270, 1483, 1696, 2039, 2762, 2777, 3940
SnaBI TACGTA 1 cut(s) 1528
SphI GCATGC 2 cut(s) 3360, 3805
SseBI AGGCCT 1 cut(s) 487
SspI AATATT 4 cut(s) 1292, 1551, 2414, 2889
SspMI CTAG 5 cut(s) 39, 563, 582, 875, 2162
SstI GAGCTC 1 cut(s) 234
StuI AGGCCT 1 cut(s) 487
StyD4I CCNGG 6 cut(s) 517, 922, 1869, 2479, 2809, 3124
StyI CCWWGG 2 cut(s) 874, 3629
SwaI ATTTAAAT 1 cut(s) 1222
TaqII GACCGA 2 cut(s) 66, 3724
TatI WGTACW 2 cut(s) 3284, 3621
TscAI CASTG 8 cut(s) 340, 478, 1104, 2070, 2262, 2497, 3567, 3734
TseFI GTSAC 4 cut(s) 605, 1298, 2564, 3817
TseI GCWGC 5 cut(s) 818, 2443, 2446, 2927, 2930
Tsp45I GTSAC 4 cut(s) 605, 1298, 2564, 3817
TspGWI ACGGA 4 cut(s) 1600, 1907, 3087, 3981
TspRI CASTG 8 cut(s) 340, 478, 1104, 2070, 2262, 2497, 3567, 3734
Tth111I GACNNNGTC 1 cut(s) 1591
VpaK11BI GGWCC 4 cut(s) 512, 977, 1178, 3074
VspI ATTAAT 1 cut(s) 3308
XagI CCTNNNNNAGG 2 cut(s) 1259, 3647
XapI RAATTY 6 cut(s) 1250, 1349, 1493, 2099, 2179, 3663
XbaI TCTAGA 1 cut(s) 2161
XceI RCATGY 4 cut(s) 114, 245, 3360, 3805
XhoI CTCGAG 1 cut(s) 1696
XmaJI CCTAGG 1 cut(s) 874
XmiI GTMKAC 2 cut(s) 1595, 3738
XmnI GAANNNNTTC 4 cut(s) 1254, 1497, 2157, 3394
XspI CTAG 5 cut(s) 39, 563, 582, 875, 2162
ZraI GACGTC 1 cut(s) 3951
Zsp2I ATGCAT 3 cut(s) 808, 2209, 2371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.