pleiotropic drug resistance protein 3-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_tran | PF00005 | 174 - 387 | 1.1e-12 | ABC transporter |
| ABC2_membrane_7 | PF19055 | 421 - 499 | 3.8e-06 | ABC-2 type transporter |
| ABC2_membrane | PF01061 | 546 - 757 | 5.7e-42 | ABC-2 type transporter |
| PDR_assoc | PF08370 | 762 - 824 | 5.3e-19 | Plant PDR ABC transporter associated |
| ABC_tran | PF00005 | 901 - 1053 | 4.5e-19 | ABC transporter |
| ABC2_membrane | PF01061 | 1198 - 1412 | 1.4e-56 | ABC-2 type transporter |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 669, 851, 2177 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1532 |
| Acc36I | ACCTGC | 1 cut(s) | 2206 |
| Acc65I | GGTACC | 1 cut(s) | 2844 |
| AccB1I | GGYRCC | 1 cut(s) | 2844 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 584, 3584, 3968 |
| AccI | GTMKAC | 2 cut(s) | 1326, 3846 |
| AccII | CGCG | 1 cut(s) | 4266 |
| AciI | CCGC | 4 cut(s) | 1092, 3712, 4264, 4266 |
| AclWI | GGATC | 5 cut(s) | 77, 81, 1021, 1455, 3769 |
| AcsI | RAATTY | 3 cut(s) | 385, 516, 2267 |
| AfeI | AGCGCT | 1 cut(s) | 4420 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 584, 1036, 1394, 1417, 3158, 3542, 3584, 3968 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1874 |
| AhlI | ACTAGT | 1 cut(s) | 4363 |
| AjiI | CACGTC | 1 cut(s) | 3156 |
| AjnI | CCWGG | 7 cut(s) | 252, 777, 1413, 2449, 2728, 2948, 3058 |
| Alw21I | GWGCWC | 2 cut(s) | 3703, 4561 |
| Alw26I | GTCTC | 6 cut(s) | 501, 1268, 1769, 2451, 2820, 3614 |
| AlwI | GGATC | 5 cut(s) | 77, 81, 1021, 1455, 3769 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2129, 2662 |
| Ama87I | CYCGRG | 1 cut(s) | 4132 |
| Aor51HI | AGCGCT | 1 cut(s) | 4420 |
| AoxI | GGCC | 7 cut(s) | 972, 1132, 1171, 1334, 2235, 2317, 3456 |
| ApeKI | GCWGC | 8 cut(s) | 11, 131, 774, 1213, 1934, 3176, 3179, 3677 |
| ApoI | RAATTY | 3 cut(s) | 385, 516, 2267 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1448, 1480 |
| AseI | ATTAAT | 1 cut(s) | 858 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 162, 414, 1665, 2113, 3009 |
| Asp718I | GGTACC | 1 cut(s) | 2844 |
| AspLEI | GCGC | 2 cut(s) | 3837, 4421 |
| AspS9I | GGNCC | 7 cut(s) | 36, 572, 1133, 1334, 1464, 2104, 4206 |
| AsuHPI | GGTGA | 2 cut(s) | 3746, 3913 |
| AvaI | CYCGRG | 1 cut(s) | 4132 |
| AvaII | GGWCC | 5 cut(s) | 36, 572, 1464, 2104, 4206 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1044, 1077 |
| BanI | GGYRCC | 1 cut(s) | 2844 |
| BanII | GRGCYC | 3 cut(s) | 253, 2610, 4561 |
| BauI | CACGAG | 1 cut(s) | 2057 |
| BbsI | GAAGAC | 3 cut(s) | 701, 1870, 4451 |
| Bbv12I | GWGCWC | 2 cut(s) | 3703, 4561 |
| BbvI | GCAGC | 7 cut(s) | 118, 761, 1225, 1921, 3166, 3188, 3664 |
| BccI | CCATC | 9 cut(s) | 1300, 2395, 2743, 2776, 2971, 3136, 3582, 4428, 4443 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1552, 1586, 1763, 1797 |
| BciT130I | CCWGG | 7 cut(s) | 254, 779, 1415, 2451, 2730, 2950, 3060 |
| BciVI | GTATCC | 2 cut(s) | 2500, 4304 |
| BclI | TGATCA | 2 cut(s) | 202, 3903 |
| BcoDI | GTCTC | 6 cut(s) | 501, 1268, 1769, 2451, 2820, 3614 |
| BcuI | ACTAGT | 1 cut(s) | 4363 |
| BfmI | CTRYAG | 7 cut(s) | 12, 602, 1211, 1483, 2313, 2693, 3441 |
| BfoI | RGCGCY | 1 cut(s) | 4422 |
| BfuAI | ACCTGC | 1 cut(s) | 2206 |
| BfuI | GTATCC | 2 cut(s) | 2500, 4304 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3455 |
| BglII | AGATCT | 1 cut(s) | 4240 |
| BisI | GCNGC | 8 cut(s) | 12, 132, 775, 1214, 1935, 3177, 3180, 3678 |
| BlpI | GCTNAGC | 1 cut(s) | 3471 |
| BlsI | GCNGC | 8 cut(s) | 13, 133, 776, 1215, 1936, 3178, 3181, 3679 |
| BmcAI | AGTACT | 3 cut(s) | 1460, 1790, 3009 |
| Bme1390I | CCNGG | 7 cut(s) | 254, 779, 1415, 2451, 2730, 2950, 3060 |
| Bme18I | GGWCC | 5 cut(s) | 36, 572, 1464, 2104, 4206 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1874 |
| BmeT110I | CYCGRG | 1 cut(s) | 4132 |
| BmgBI | CACGTC | 1 cut(s) | 3156 |
| BmgT120I | GGNCC | 7 cut(s) | 36, 572, 1133, 1334, 1464, 2104, 4206 |
| BmiI | GGNNCC | 5 cut(s) | 250, 1466, 2846, 3381, 4525 |
| BmrFI | CCNGG | 7 cut(s) | 254, 779, 1415, 2451, 2730, 2950, 3060 |
| BmsI | GCATC | 9 cut(s) | 65, 546, 1057, 1957, 2071, 2105, 3157, 3689, 4311 |
| BpiI | GAAGAC | 3 cut(s) | 701, 1870, 4451 |
| BpmI | CTGGAG | 5 cut(s) | 163, 1397, 2433, 2895, 4449 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3471 |
| BpuEI | CTTGAG | 3 cut(s) | 269, 483, 620 |
| BsaAI | YACGTR | 1 cut(s) | 1754 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1766 |
| BsaI | GGTCTC | 1 cut(s) | 1769 |
| BsaJI | CCNNGG | 9 cut(s) | 252, 778, 1030, 1330, 2100, 2279, 2338, 2413, 4264 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3294, 3324 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 584, 1036, 1394, 1417, 3158, 3542, 3584, 3968 |
| Bse118I | RCCGGY | 1 cut(s) | 797 |
| Bse1I | ACTGG | 9 cut(s) | 762, 1466, 2719, 2812, 3459, 3536, 3983, 4190, 4432 |
| Bse3DI | GCAATG | 4 cut(s) | 1077, 1722, 1958, 3844 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1766 |
| BseBI | CCWGG | 7 cut(s) | 254, 779, 1415, 2451, 2730, 2950, 3060 |
| BseDI | CCNNGG | 9 cut(s) | 252, 778, 1030, 1330, 2100, 2279, 2338, 2413, 4264 |
| BseJI | GATNNNNATC | 1 cut(s) | 1766 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 584, 1036, 1394, 1417, 3158, 3542, 3584, 3968 |
| BseMI | GCAATG | 4 cut(s) | 1077, 1722, 1958, 3844 |
| BseNI | ACTGG | 9 cut(s) | 762, 1466, 2719, 2812, 3459, 3536, 3983, 4190, 4432 |
| BseRI | GAGGAG | 4 cut(s) | 3315, 3865, 4429, 4548 |
| BseXI | GCAGC | 7 cut(s) | 118, 761, 1225, 1921, 3166, 3188, 3664 |
| BseYI | CCCAGC | 3 cut(s) | 1135, 3328, 3406 |
| Bsh1236I | CGCG | 1 cut(s) | 4266 |
| BshFI | GGCC | 7 cut(s) | 974, 1134, 1173, 1336, 2237, 2319, 3458 |
| BshNI | GGYRCC | 1 cut(s) | 2844 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3703, 4561 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4132 |
| BsiSI | CCGG | 3 cut(s) | 798, 1089, 4547 |
| BslFI | GGGAC | 2 cut(s) | 926, 1450 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 584, 1036, 1394, 1417, 3158, 3542, 3584, 3968 |
| BsmAI | GTCTC | 6 cut(s) | 501, 1268, 1769, 2451, 2820, 3614 |
| BsmFI | GGGAC | 2 cut(s) | 926, 1450 |
| BsmI | GAATGC | 3 cut(s) | 162, 3272, 3753 |
| BsnI | GGCC | 7 cut(s) | 974, 1134, 1173, 1336, 2237, 2319, 3458 |
| Bso31I | GGTCTC | 1 cut(s) | 1769 |
| BsoBI | CYCGRG | 1 cut(s) | 4132 |
| Bsp1286I | GDGCHC | 4 cut(s) | 253, 2610, 3703, 4561 |
| Bsp1407I | TGTACA | 1 cut(s) | 4022 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3471 |
| Bsp19I | CCATGG | 2 cut(s) | 1330, 2338 |
| BspACI | CCGC | 4 cut(s) | 1092, 3712, 4264, 4266 |
| BspANI | GGCC | 7 cut(s) | 974, 1134, 1173, 1336, 2237, 2319, 3458 |
| BspFNI | CGCG | 1 cut(s) | 4266 |
| BspHI | TCATGA | 3 cut(s) | 205, 1671, 2476 |
| BspLI | GGNNCC | 5 cut(s) | 250, 1466, 2846, 3381, 4525 |
| BspMAI | CTGCAG | 3 cut(s) | 16, 1215, 3445 |
| BspMI | ACCTGC | 1 cut(s) | 2206 |
| BspPI | GGATC | 5 cut(s) | 77, 81, 1021, 1455, 3769 |
| BspT107I | GGYRCC | 1 cut(s) | 2844 |
| BspTNI | GGTCTC | 1 cut(s) | 1769 |
| BsrDI | GCAATG | 4 cut(s) | 1077, 1722, 1958, 3844 |
| BsrFI | RCCGGY | 1 cut(s) | 797 |
| BsrGI | TGTACA | 1 cut(s) | 4022 |
| BsrI | ACTGG | 9 cut(s) | 762, 1466, 2719, 2812, 3459, 3536, 3983, 4190, 4432 |
| BssAI | RCCGGY | 1 cut(s) | 797 |
| BssECI | CCNNGG | 9 cut(s) | 252, 778, 1030, 1330, 2100, 2279, 2338, 2413, 4264 |
| BssNAI | GTATAC | 2 cut(s) | 1327, 3847 |
| BssSI | CACGAG | 1 cut(s) | 2057 |
| BssT1I | CCWWGG | 6 cut(s) | 1030, 1330, 2100, 2279, 2338, 2413 |
| Bst1107I | GTATAC | 2 cut(s) | 1327, 3847 |
| Bst2BI | CACGAG | 1 cut(s) | 2057 |
| Bst2UI | CCWGG | 7 cut(s) | 254, 779, 1415, 2451, 2730, 2950, 3060 |
| Bst4CI | ACNGT | 9 cut(s) | 367, 745, 2012, 2131, 2923, 3320, 3803, 4233, 4345 |
| Bst6I | CTCTTC | 3 cut(s) | 913, 1545, 1932 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3674 |
| BstAUI | TGTACA | 1 cut(s) | 4022 |
| BstBAI | YACGTR | 1 cut(s) | 1754 |
| BstC8I | GCNNGC | 7 cut(s) | 54, 1565, 1648, 2321, 2891, 2960, 4557 |
| BstDSI | CCRYGG | 3 cut(s) | 1330, 2338, 4264 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1415 |
| BstFNI | CGCG | 1 cut(s) | 4266 |
| BstH2I | RGCGCY | 1 cut(s) | 4422 |
| BstHHI | GCGC | 2 cut(s) | 3837, 4421 |
| BstMAI | GTCTC | 6 cut(s) | 501, 1268, 1769, 2451, 2820, 3614 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 1179, 2207, 2945, 3176, 3455, 3674, 4556 |
| BstNI | CCWGG | 7 cut(s) | 254, 779, 1415, 2451, 2730, 2950, 3060 |
| BstNSI | RCATGY | 5 cut(s) | 56, 1598, 1650, 2427, 3609 |
| BstSCI | CCNGG | 7 cut(s) | 252, 777, 1413, 2449, 2728, 2948, 3058 |
| BstSFI | CTRYAG | 7 cut(s) | 12, 602, 1211, 1483, 2313, 2693, 3441 |
| BstUI | CGCG | 1 cut(s) | 4266 |
| BstV1I | GCAGC | 7 cut(s) | 118, 761, 1225, 1921, 3166, 3188, 3664 |
| BstV2I | GAAGAC | 3 cut(s) | 701, 1870, 4451 |
| BstX2I | RGATCY | 3 cut(s) | 86, 1026, 4240 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 441, 785, 1246, 3414 |
| BstYI | RGATCY | 3 cut(s) | 86, 1026, 4240 |
| BstZ17I | GTATAC | 2 cut(s) | 1327, 3847 |
| BsuI | GTATCC | 2 cut(s) | 2500, 4304 |
| BsuRI | GGCC | 7 cut(s) | 974, 1134, 1173, 1336, 2237, 2319, 3458 |
| BtgI | CCRYGG | 3 cut(s) | 1330, 2338, 4264 |
| BtrI | CACGTC | 1 cut(s) | 3156 |
| BtsI | GCAGTG | 2 cut(s) | 131, 4025 |
| BveI | ACCTGC | 1 cut(s) | 2206 |
| Cac8I | GCNNGC | 7 cut(s) | 54, 1565, 1648, 2321, 2891, 2960, 4557 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2129, 2662 |
| CciI | TCATGA | 3 cut(s) | 205, 1671, 2476 |
| CfoI | GCGC | 2 cut(s) | 3837, 4421 |
| Cfr10I | RCCGGY | 1 cut(s) | 797 |
| Cfr13I | GGNCC | 7 cut(s) | 36, 572, 1133, 1334, 1464, 2104, 4206 |
| Cfr42I | CCGCGG | 1 cut(s) | 4267 |
| CseI | GACGC | 1 cut(s) | 968 |
| CsiI | ACCWGGT | 1 cut(s) | 3058 |
| DraI | TTTAAA | 3 cut(s) | 1522, 2514, 3601 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1532 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1874 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1532 |
| Eam1104I | CTCTTC | 3 cut(s) | 913, 1545, 1932 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1874 |
| EarI | CTCTTC | 3 cut(s) | 913, 1545, 1932 |
| EciI | GGCGGA | 1 cut(s) | 3727 |
| Ecl136II | GAGCTC | 1 cut(s) | 4559 |
| Eco130I | CCWWGG | 6 cut(s) | 1030, 1330, 2100, 2279, 2338, 2413 |
| Eco147I | AGGCCT | 1 cut(s) | 1173 |
| Eco24I | GRGCYC | 3 cut(s) | 253, 2610, 4561 |
| Eco31I | GGTCTC | 1 cut(s) | 1769 |
| Eco32I | GATATC | 3 cut(s) | 1164, 1851, 2373 |
| Eco47I | GGWCC | 5 cut(s) | 36, 572, 1464, 2104, 4206 |
| Eco47III | AGCGCT | 1 cut(s) | 4420 |
| Eco53kI | GAGCTC | 1 cut(s) | 4559 |
| Eco88I | CYCGRG | 1 cut(s) | 4132 |
| EcoICRI | GAGCTC | 1 cut(s) | 4559 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1415 |
| EcoO109I | RGGNCCY | 1 cut(s) | 36 |
| EcoRII | CCWGG | 7 cut(s) | 252, 777, 1413, 2449, 2728, 2948, 3058 |
| EcoRV | GATATC | 3 cut(s) | 1164, 1851, 2373 |
| EcoT14I | CCWWGG | 6 cut(s) | 1030, 1330, 2100, 2279, 2338, 2413 |
| EcoT22I | ATGCAT | 4 cut(s) | 58, 1972, 2429, 3788 |
| EcoT38I | GRGCYC | 3 cut(s) | 253, 2610, 4561 |
| ErhI | CCWWGG | 6 cut(s) | 1030, 1330, 2100, 2279, 2338, 2413 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1542, 1574, 1635, 1667, 2994, 3026 |
| FaqI | GGGAC | 2 cut(s) | 926, 1450 |
| FauI | CCCGC | 1 cut(s) | 4259 |
| FauNDI | CATATG | 1 cut(s) | 2866 |
| FbaI | TGATCA | 2 cut(s) | 202, 3903 |
| FblI | GTMKAC | 2 cut(s) | 1326, 3846 |
| Fnu4HI | GCNGC | 8 cut(s) | 12, 132, 775, 1214, 1935, 3177, 3180, 3678 |
| FriOI | GRGCYC | 3 cut(s) | 253, 2610, 4561 |
| Fsp4HI | GCNGC | 8 cut(s) | 12, 132, 775, 1214, 1935, 3177, 3180, 3678 |
| GlaI | GCGC | 2 cut(s) | 3836, 4420 |
| GluI | GCNGC | 8 cut(s) | 12, 132, 775, 1214, 1935, 3177, 3180, 3678 |
| GsaI | CCCAGC | 3 cut(s) | 1139, 3332, 3410 |
| GsuI | CTGGAG | 5 cut(s) | 163, 1397, 2433, 2895, 4449 |
| HaeII | RGCGCY | 1 cut(s) | 4422 |
| HaeIII | GGCC | 7 cut(s) | 974, 1134, 1173, 1336, 2237, 2319, 3458 |
| HapII | CCGG | 3 cut(s) | 798, 1089, 4547 |
| HgaI | GACGC | 1 cut(s) | 968 |
| HhaI | GCGC | 2 cut(s) | 3837, 4421 |
| Hin6I | GCGC | 2 cut(s) | 3835, 4419 |
| HinP1I | GCGC | 2 cut(s) | 3835, 4419 |
| HincII | GTYRAC | 2 cut(s) | 1221, 3099 |
| HindII | GTYRAC | 2 cut(s) | 1221, 3099 |
| HindIII | AAGCTT | 4 cut(s) | 457, 878, 1544, 3347 |
| HpaI | GTTAAC | 2 cut(s) | 1221, 3099 |
| HpaII | CCGG | 3 cut(s) | 798, 1089, 4547 |
| HphI | GGTGA | 2 cut(s) | 3746, 3913 |
| Hpy166II | GTNNAC | 8 cut(s) | 1221, 1327, 2813, 3099, 3737, 3847, 4009, 4025 |
| Hpy8I | GTNNAC | 8 cut(s) | 1221, 1327, 2813, 3099, 3737, 3847, 4009, 4025 |
| Hpy99I | CGWCG | 3 cut(s) | 264, 1775, 3281 |
| HpyCH4III | ACNGT | 9 cut(s) | 367, 745, 2012, 2131, 2923, 3320, 3803, 4233, 4345 |
| HpyCH4IV | ACGT | 6 cut(s) | 170, 259, 1753, 3155, 4011, 4478 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 1179, 2207, 2945, 3176, 3455, 3674, 4556 |
| HpySE526I | ACGT | 6 cut(s) | 170, 259, 1753, 3155, 4011, 4478 |
| HspAI | GCGC | 2 cut(s) | 3835, 4419 |
| KpnI | GGTACC | 1 cut(s) | 2848 |
| Ksp22I | TGATCA | 2 cut(s) | 202, 3903 |
| KspAI | GTTAAC | 2 cut(s) | 1221, 3099 |
| KspI | CCGCGG | 1 cut(s) | 4267 |
| LmnI | GCTCC | 8 cut(s) | 248, 1187, 2281, 2381, 2762, 3592, 3698, 4416 |
| Lsp1109I | GCAGC | 7 cut(s) | 118, 761, 1225, 1921, 3166, 3188, 3664 |
| LweI | GCATC | 9 cut(s) | 65, 546, 1057, 1957, 2071, 2105, 3157, 3689, 4311 |
| MabI | ACCWGGT | 1 cut(s) | 3058 |
| MaeII | ACGT | 6 cut(s) | 170, 259, 1753, 3155, 4011, 4478 |
| MfeI | CAATTG | 2 cut(s) | 981, 4564 |
| MflI | RGATCY | 3 cut(s) | 86, 1026, 4240 |
| MhlI | GDGCHC | 4 cut(s) | 253, 2610, 3703, 4561 |
| MlyI | GAGTC | 3 cut(s) | 553, 1434, 4459 |
| MmeI | TCCRAC | 2 cut(s) | 1516, 3986 |
| Mph1103I | ATGCAT | 4 cut(s) | 58, 1972, 2429, 3788 |
| MroXI | GAANNNNTTC | 5 cut(s) | 162, 414, 1665, 2113, 3009 |
| MslI | CAYNNNNRTG | 4 cut(s) | 51, 1593, 1756, 3493 |
| MspA1I | CMGCKG | 4 cut(s) | 183, 1934, 3179, 4266 |
| MspI | CCGG | 3 cut(s) | 798, 1089, 4547 |
| MspR9I | CCNGG | 7 cut(s) | 254, 779, 1415, 2451, 2730, 2950, 3060 |
| MunI | CAATTG | 2 cut(s) | 981, 4564 |
| Mva1269I | GAATGC | 3 cut(s) | 162, 3272, 3753 |
| MvaI | CCWGG | 7 cut(s) | 254, 779, 1415, 2451, 2730, 2950, 3060 |
| MvnI | CGCG | 1 cut(s) | 4266 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 1179, 2207, 2945, 3176, 3455, 3674, 4556 |
| NcoI | CCATGG | 2 cut(s) | 1330, 2338 |
| NdeI | CATATG | 1 cut(s) | 2866 |
| NlaIV | GGNNCC | 5 cut(s) | 250, 1466, 2846, 3381, 4525 |
| NmuCI | GTSAC | 8 cut(s) | 171, 1340, 2308, 2354, 2897, 3427, 3823, 3981 |
| NsiI | ATGCAT | 4 cut(s) | 58, 1972, 2429, 3788 |
| NspI | RCATGY | 5 cut(s) | 56, 1598, 1650, 2427, 3609 |
| PaeI | GCATGC | 2 cut(s) | 56, 1650 |
| PagI | TCATGA | 3 cut(s) | 205, 1671, 2476 |
| PceI | AGGCCT | 1 cut(s) | 1173 |
| PctI | GAATGC | 3 cut(s) | 162, 3272, 3753 |
| PdmI | GAANNNNTTC | 5 cut(s) | 162, 414, 1665, 2113, 3009 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 584, 3584, 3968 |
| PfoI | TCCNGGA | 1 cut(s) | 1413 |
| PkrI | GCNGC | 8 cut(s) | 13, 133, 776, 1215, 1936, 3178, 3181, 3679 |
| PleI | GAGTC | 3 cut(s) | 553, 1433, 4459 |
| PpsI | GAGTC | 3 cut(s) | 553, 1433, 4459 |
| Ppu21I | YACGTR | 1 cut(s) | 1754 |
| PpuMI | RGGWCCY | 1 cut(s) | 36 |
| PshBI | ATTAAT | 1 cut(s) | 858 |
| PsiI | TTATAA | 3 cut(s) | 669, 851, 2177 |
| Psp124BI | GAGCTC | 1 cut(s) | 4561 |
| Psp5II | RGGWCCY | 1 cut(s) | 36 |
| Psp6I | CCWGG | 7 cut(s) | 252, 777, 1413, 2449, 2728, 2948, 3058 |
| PspFI | CCCAGC | 3 cut(s) | 1135, 3328, 3406 |
| PspGI | CCWGG | 7 cut(s) | 252, 777, 1413, 2449, 2728, 2948, 3058 |
| PspN4I | GGNNCC | 5 cut(s) | 250, 1466, 2846, 3381, 4525 |
| PspPI | GGNCC | 7 cut(s) | 36, 572, 1133, 1334, 1464, 2104, 4206 |
| PspPPI | RGGWCCY | 1 cut(s) | 36 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4329, 4361 |
| PstI | CTGCAG | 3 cut(s) | 16, 1215, 3445 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2129, 2662 |
| PsuI | RGATCY | 3 cut(s) | 86, 1026, 4240 |
| PvuII | CAGCTG | 3 cut(s) | 183, 1934, 3179 |
| RseI | CAYNNNNRTG | 4 cut(s) | 51, 1593, 1756, 3493 |
| SacI | GAGCTC | 1 cut(s) | 4561 |
| SacII | CCGCGG | 1 cut(s) | 4267 |
| SatI | GCNGC | 8 cut(s) | 12, 132, 775, 1214, 1935, 3177, 3180, 3678 |
| Sau96I | GGNCC | 7 cut(s) | 36, 572, 1133, 1334, 1464, 2104, 4206 |
| ScaI | AGTACT | 3 cut(s) | 1460, 1790, 3009 |
| SchI | GAGTC | 3 cut(s) | 553, 1434, 4459 |
| ScrFI | CCNGG | 7 cut(s) | 254, 779, 1415, 2451, 2730, 2950, 3060 |
| SduI | GDGCHC | 4 cut(s) | 253, 2610, 3703, 4561 |
| SexAI | ACCWGGT | 1 cut(s) | 3058 |
| SfaNI | GCATC | 9 cut(s) | 65, 546, 1057, 1957, 2071, 2105, 3157, 3689, 4311 |
| SfcI | CTRYAG | 7 cut(s) | 12, 602, 1211, 1483, 2313, 2693, 3441 |
| Sfr303I | CCGCGG | 1 cut(s) | 4267 |
| SgrBI | CCGCGG | 1 cut(s) | 4267 |
| SinI | GGWCC | 5 cut(s) | 36, 572, 1464, 2104, 4206 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 51, 1593, 1756, 3493 |
| SmlI | CTYRAG | 3 cut(s) | 284, 498, 635 |
| SmoI | CTYRAG | 3 cut(s) | 284, 498, 635 |
| SpeI | ACTAGT | 1 cut(s) | 4363 |
| SphI | GCATGC | 2 cut(s) | 56, 1650 |
| SseBI | AGGCCT | 1 cut(s) | 1173 |
| SsiI | CCGC | 4 cut(s) | 1092, 3712, 4264, 4266 |
| SspI | AATATT | 2 cut(s) | 3138, 3768 |
| SstI | GAGCTC | 1 cut(s) | 4561 |
| StuI | AGGCCT | 1 cut(s) | 1173 |
| StyD4I | CCNGG | 7 cut(s) | 252, 777, 1413, 2449, 2728, 2948, 3058 |
| StyI | CCWWGG | 6 cut(s) | 1030, 1330, 2100, 2279, 2338, 2413 |
| TaaI | ACNGT | 9 cut(s) | 367, 745, 2012, 2131, 2923, 3320, 3803, 4233, 4345 |
| TaiI | ACGT | 6 cut(s) | 173, 262, 1756, 3158, 4014, 4481 |
| TaqI | TCGA | 6 cut(s) | 1572, 1770, 2689, 3077, 3276, 3947 |
| TaqII | GACCGA | 1 cut(s) | 2123 |
| TatI | WGTACW | 8 cut(s) | 1458, 1788, 3007, 3215, 3538, 3870, 4022, 4258 |
| TseFI | GTSAC | 8 cut(s) | 171, 1340, 2308, 2354, 2897, 3427, 3823, 3981 |
| TseI | GCWGC | 8 cut(s) | 11, 131, 774, 1213, 1934, 3176, 3179, 3677 |
| Tsp45I | GTSAC | 8 cut(s) | 171, 1340, 2308, 2354, 2897, 3427, 3823, 3981 |
| TspGWI | ACGGA | 3 cut(s) | 1367, 3906, 4251 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 584, 3584, 3968 |
| VpaK11BI | GGWCC | 5 cut(s) | 36, 572, 1464, 2104, 4206 |
| VspI | ATTAAT | 1 cut(s) | 858 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1415 |
| XapI | RAATTY | 3 cut(s) | 385, 516, 2267 |
| XbaI | TCTAGA | 2 cut(s) | 1655, 1865 |
| XceI | RCATGY | 5 cut(s) | 56, 1598, 1650, 2427, 3609 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3585 |
| XmiI | GTMKAC | 2 cut(s) | 1326, 3846 |
| XmnI | GAANNNNTTC | 5 cut(s) | 162, 414, 1665, 2113, 3009 |
| ZrmI | AGTACT | 3 cut(s) | 1460, 1790, 3009 |
| Zsp2I | ATGCAT | 4 cut(s) | 58, 1972, 2429, 3788 |