Rh2CG593000

pleiotropic drug resistance protein 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000472
Physical Location & Seq
Forward (+)
76924466 .. 76939059
14594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG593000.1

Sequence Viewer

Length: 2349 bp
ATGAAAGAAGTTGCTCGAAGGGAGAAGCAAGCTGGTATAGTCCCGGAACCAGACATTGACACTTATATGAAGGCCATTTCAATTGAAGGGTTGAAAAAGTCTCTAATGACAGACTATATAATAAAGATCCTTGGGCTGGACATTTGTGCTGATACAATCGCAGGGGACGCAATGCAAAGAGGAATTTCTGGTGGTCAAAAGAAAAGGCTTACAACAGGATCTGTCAGTCTTTTATCTTTAATAGTAATGTTTCTATTTGGAGGCTTCATAATTCCCAAATCTTCTCTACCTCCTTGGTTGGAATGGGGATTTTGGGTTTCTCCGTTGGCATTTGCAGAAATAGGTGCTTCAATAAATGAATTTCATGCTCCAAGGTGGCAAAAGGTTTTATCTTCCAATGTTACTATAGGCCAGCAAGCTTTAATTAACCGGGGTCTAAACTTCAGTGAATACTTCTATTGGATATCAATAGGAGCTTTATTTGGATTTTGGATGGTTTTCAACCTTGGGTTCACATGCGTACTCAGTTATTCAAAGGCTCCAGGGAGTTCTCGGACTATCATTTCTCATGAAAGATTCTCCCGTCTAAAGAATAAAGAAATTTTAGATAATTCCTGTCAAGAAAAAGAAGTAAGTAGTGTAGACACTGACATTATTACTTCAGAATCTACAAATGCAGGCATGGTGTTGCCGTTTGAGCCCATAACTATATCATTTGAGAAAGTGAAATACTATATTGATACACCCCAGAAACTGAGAGGGCAAGGTTTCCCACCAAATCGACTACAGCTTCTTCAAGACATAACTGGTGCATTTAGACCTGGAATTCTCACAGCTTTGATGGGAGTTAGTGGAGCCGGAAAAACGACACTGATGGATGTTCTTTCTGGAAGAAAAACTGGTGGAATTATTGAAGGAGACATTAGAATTGGAGGGTACCCAAAAGTTCAAGAAACATATGCAAGAATATCTGGGTATTGCGAGCAAAGTGACATACATTCTCCAGAGCTTACAGTAGAAGAGTCAGTAGCATACTCAGCTTGGTTACGCTTGTCATCCCAGATTGACAGAAATACTAGAGCTGAGTTTGTGAAAGAAGTACTTCAAATGATAGAGCTTGATGAAATCAAAGACGAGTTAGTTGGCATACCAGGTGGTAGTGGTATATCAACTGAACAGCGTAAAAGGCTAACAATTGCAGTGGAGCTTGTTTCAAATCCATCTGTTATATTCATGGACGAACCCACGTCTGGTTTAGATGCCAGAGCAGCTGCAATAGTCATGCGAGTTGTGAAAAATATTGTCAGTACAAGGAGGACTGTTGTATGCACTATTCATCAGCCAAGTATTGACATATTTGAAGCCTTCGATGAGCTTCTTTTGATGAAAAGAGGAGGACAAGTAATATACTGTGGAGAACTGGGTCAAGATTCGAGTAAGCTTATCCAATACTTTGAGGGTATTTCTGGGGTTCCAAAAATCAAAGATAACTACAACCCAGCAACATGGATGTTAGAAGTCACGAGTCCTTCTGCAGAAGCCAAACTTGCCATAGATTTTGCTCAGCTTTATAGAGAATCAGATTTATGCCAGAAGAACAATGACCTAGTTAGAGAACTCAGCTTTCCAGTAGAAGGCTCAAAGGAATTGAATTTTCCTACTCGCTTCCCGCAAAATGGATGGGAGCAATTTAAAGCATGTCTCTGGAAGAGACATCTCTCCTACTGGAGAAATCCAAAATATAACCTGGGGCGATTGTTAATCACTGCTGCATCCTCTTTGATATTTGGAGCACTTCTTTGGCAGAAAGGACAGAAAATAAATGGTGAACAGGAGTTCTTCAGCATTCTAGGATCAATATTTATTTTACAACAATGCATTGGAATTGGTAACAGTTCCTCAGTTTTACCATTTGTCGCTTCTGAGCGCAATGTTGTATACCGAGAAAGGTTTGCTGGAATGTACTCCTCATGGGCATATTCTTTATCCCAGGTAATCATTGAACTTCCCTATATTTTCCTTCAAGCAGTTCTGTTTTCGACCATTACATATCCAACCATTGGTTTCCACTGGTCACTTTTCAAAGTATTCTGGTATGTGTATGCTATGTTTTGTACGCTGCTCTACTTCACTTACTTCGGTATATTGGTTGCTTCTGTGACCCCAACTTTCCAAGTAGCTTCAGTATTATCAAGTTTCTGCTACACAATGTTGAATCTGTTCTCGGGATTCCTAATACCTCAACCAAACATTCCTAAATGGTGGGTTTGGGGCTACTGGATTTCTCCTTTATCCTGGTCCTTGAAGGGTATTCTCACTTCGCAAGAAATTGCAACTCAACTTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

782

Amino Acids

87.79

Weight (kDa)

7.46

Isoelectric Point (pI)

38.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC2_membrane PF01061 72 - 121 2.3e-08 ABC-2 type transporter
PDR_assoc PF08370 126 - 188 1e-19 Plant PDR ABC transporter associated
ABC_tran PF00005 265 - 417 2.1e-19 ABC transporter
ABC2_membrane PF01061 562 - 773 1.9e-56 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15230 AT4G15230 AT4G15230 AT4G15230 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15236
fragaria_vesca FvH4_4g21360 FvH4_4g21360 FvH4_4g21390 FvH4_6g49431 FvH4_6g49450
malus_domestica MD09G1044300.v1.1 MD16G1137900.v1.1 MD16G1138000.v1.1
prunus_persica Prupe.1G106800_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.3G273300_v2.0.a1
pyrus_communis pycom111g03460 pycom16g12210
rosa_chinensis RchiOBHm_Chr2g0169331 RchiOBHm_Chr2g0169361 RchiOBHm_Chr2g0169371 RchiOBHm_Chr2g0169381 RchiOBHm_Chr2g0169411 RchiOBHm_Chr4g0427141 RchiOBHm_Chr4g0427321
rosa_laevigata RLG00000007252 RLG00000007258 RLG00000013974 RLG00000021856 RLG00000021857 RLG00000021858 RLG00000021859
rosa_multiflora Rmu_sc0000648.1_g000007 Rmu_sc0000648.1_g000009 Rmu_sc0003813.1_g000016 Rmu_sc0009165.1_g000008 Rmu_sc0022554.1_g000001
rosa_roxburghii Rroxscaffold_2G00082200 Rroxscaffold_2G00082230 Rroxscaffold_5G00368960 Rroxscaffold_5G00369010 Rroxscaffold_7G00200390
rosa_rugosa Rorug02G0539500 Rorug02G0539600 Rorug02G0539700 Rorug04G0216400 Rorug04G0216500 Rorug04G0216500 Rorug04G0216600
rosa_samantha Rh2AG610800 Rh2AG611000 Rh2AG611100 Rh2CG592800 Rh2CG593000 Rh2CG593200 Rh2DG634900 Rh2DG635100 Rh2DG635200 Rh2DG635400 Rh4AG272200 Rh4AG272900 Rh4DG275600 Rh4DG276000
rosa_wichuraiana Rw2G050640 Rw2G050660 Rw2G050670 Rw2G050680 Rw4G023610 Rw4G023680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 936
AccB1I GGYRCC 1 cut(s) 936
AccB7I CCANNNNNTGG 1 cut(s) 2060
AccI GTMKAC 2 cut(s) 642, 1938
AciI CCGC 1 cut(s) 1670
AclWI GGATC 3 cut(s) 121, 226, 1861
AcsI RAATTY 5 cut(s) 183, 359, 600, 825, 1651
AcuI CTGAAG 4 cut(s) 427, 645, 1825, 2166
AfaI GTAC 6 cut(s) 522, 938, 1101, 1309, 1964, 2116
AfiI CCNNNNNNNGG 5 cut(s) 136, 1250, 1634, 1676, 2060
AjiI CACGTC 1 cut(s) 1248
AjnI CCWGG 6 cut(s) 541, 820, 1150, 1746, 1989, 2294
Alw21I GWGCWC 1 cut(s) 1795
Alw26I GTCTC 4 cut(s) 105, 912, 1705, 1706
AlwI GGATC 3 cut(s) 121, 226, 1861
AlwNI CAGNNNCTG 2 cut(s) 221, 754
Ama87I CYCGRG 1 cut(s) 2224
AoxI GGCC 2 cut(s) 72, 409
ApeKI GCWGC 4 cut(s) 1268, 1271, 1769, 2119
ApoI RAATTY 5 cut(s) 183, 359, 600, 825, 1651
Asp700I GAANNNNTTC 2 cut(s) 1101, 2219
Asp718I GGTACC 1 cut(s) 936
AspLEI GCGC 1 cut(s) 1929
AspS9I GGNCC 1 cut(s) 2298
AsuC2I CCSGG 2 cut(s) 44, 431
AsuHPI GGTGA 1 cut(s) 1838
AvaI CYCGRG 1 cut(s) 2224
AvaII GGWCC 1 cut(s) 2298
BanI GGYRCC 1 cut(s) 936
BanII GRGCYC 1 cut(s) 702
BarI GAAGNNNNNNTAC 2 cut(s) 2302, 2334
BauI CACGAG 1 cut(s) 1522
Bbv12I GWGCWC 1 cut(s) 1795
BbvI GCAGC 4 cut(s) 1258, 1280, 1756, 2106
BccI CCATC 5 cut(s) 487, 835, 868, 1228, 1674
BceAI ACGGC 1 cut(s) 676
BciT130I CCWGG 6 cut(s) 543, 822, 1152, 1748, 1991, 2296
BcnI CCSGG 2 cut(s) 44, 431
BcoDI GTCTC 4 cut(s) 105, 912, 1705, 1706
BfaI CTAG 3 cut(s) 1077, 1607, 1850
BfmI CTRYAG 3 cut(s) 405, 785, 1533
BisI GCNGC 4 cut(s) 1269, 1272, 1770, 2120
BlpI GCTNAGC 1 cut(s) 1563
BlsI GCNGC 4 cut(s) 1270, 1273, 1771, 2121
BmcAI AGTACT 1 cut(s) 1101
Bme1390I CCNGG 8 cut(s) 44, 431, 543, 822, 1152, 1748, 1991, 2296
Bme18I GGWCC 1 cut(s) 2298
BmeT110I CYCGRG 1 cut(s) 2224
BmgBI CACGTC 1 cut(s) 1248
BmgT120I GGNCC 1 cut(s) 2298
BmiI GGNNCC 5 cut(s) 48, 540, 856, 938, 1473
BmrFI CCNGG 8 cut(s) 44, 431, 543, 822, 1152, 1748, 1991, 2296
BmrI ACTGGG 1 cut(s) 1430
BmsI GCATC 2 cut(s) 1249, 1781
BmuI ACTGGG 1 cut(s) 1430
BpmI CTGGAG 3 cut(s) 525, 987, 1747
Bpu1102I GCTNAGC 1 cut(s) 1563
BpuMI CCSGG 2 cut(s) 44, 431
BsaJI CCNNGG 8 cut(s) 130, 293, 371, 430, 505, 542, 1747, 1989
BsaXI ACNNNNNCTCC 2 cut(s) 1386, 1416
Bsc4I CCNNNNNNNGG 5 cut(s) 136, 1250, 1634, 1676, 2060
Bse1I ACTGG 7 cut(s) 811, 904, 1425, 1628, 1730, 2075, 2282
Bse3DI GCAATG 2 cut(s) 177, 1936
BseBI CCWGG 6 cut(s) 543, 822, 1152, 1748, 1991, 2296
BseDI CCNNGG 8 cut(s) 130, 293, 371, 430, 505, 542, 1747, 1989
BseGI GGATG 6 cut(s) 498, 883, 1055, 1515, 1685, 1772
BseLI CCNNNNNNNGG 5 cut(s) 136, 1250, 1634, 1676, 2060
BseMI GCAATG 2 cut(s) 177, 1936
BseMII CTCAG 8 cut(s) 538, 746, 1050, 1074, 1577, 1633, 1914, 1914
BseNI ACTGG 7 cut(s) 811, 904, 1425, 1628, 1730, 2075, 2282
BseRI GAGGAG 2 cut(s) 1407, 1957
BseXI GCAGC 4 cut(s) 1258, 1280, 1756, 2106
BseYI CCCAGC 1 cut(s) 1498
BshFI GGCC 2 cut(s) 74, 411
BshNI GGYRCC 1 cut(s) 936
BsiHKAI GWGCWC 1 cut(s) 1795
BsiHKCI CYCGRG 1 cut(s) 2224
BsiSI CCGG 3 cut(s) 44, 430, 858
BslFI GGGAC 2 cut(s) 26, 179
BslI CCNNNNNNNGG 5 cut(s) 136, 1250, 1634, 1676, 2060
BsmAI GTCTC 4 cut(s) 105, 912, 1705, 1706
BsmFI GGGAC 2 cut(s) 26, 179
BsmI GAATGC 1 cut(s) 1845
BsnI GGCC 2 cut(s) 74, 411
BsoBI CYCGRG 1 cut(s) 2224
Bsp1286I GDGCHC 2 cut(s) 702, 1795
Bsp143I GATC 3 cut(s) 126, 218, 1853
Bsp1720I GCTNAGC 1 cut(s) 1563
BspACI CCGC 1 cut(s) 1670
BspANI GGCC 2 cut(s) 74, 411
BspCNI CTCAG 8 cut(s) 537, 747, 1049, 1075, 1576, 1632, 1913, 1915
BspHI TCATGA 1 cut(s) 568
BspLI GGNNCC 5 cut(s) 48, 540, 856, 938, 1473
BspMAI CTGCAG 1 cut(s) 1537
BspPI GGATC 3 cut(s) 121, 226, 1861
BspT107I GGYRCC 1 cut(s) 936
BsrDI GCAATG 2 cut(s) 177, 1936
BsrI ACTGG 7 cut(s) 811, 904, 1425, 1628, 1730, 2075, 2282
BssECI CCNNGG 8 cut(s) 130, 293, 371, 430, 505, 542, 1747, 1989
BssMI GATC 3 cut(s) 126, 218, 1853
BssNAI GTATAC 1 cut(s) 1939
BssSI CACGAG 1 cut(s) 1522
BssT1I CCWWGG 4 cut(s) 130, 293, 371, 505
Bst1107I GTATAC 1 cut(s) 1939
Bst2BI CACGAG 1 cut(s) 1522
Bst2UI CCWGG 6 cut(s) 543, 822, 1152, 1748, 1991, 2296
Bst4CI ACNGT 4 cut(s) 1015, 1321, 1412, 1895
Bst6I CTCTTC 2 cut(s) 1014, 1703
BstC8I GCNNGC 5 cut(s) 30, 413, 417, 679, 983
BstDEI CTNAG 8 cut(s) 524, 755, 1036, 1083, 1563, 1619, 1900, 1923
BstF5I GGATG 6 cut(s) 498, 883, 1055, 1515, 1685, 1772
BstHHI GCGC 1 cut(s) 1929
BstKTI GATC 3 cut(s) 129, 221, 1856
BstMAI GTCTC 4 cut(s) 105, 912, 1705, 1706
BstMBI GATC 3 cut(s) 126, 218, 1853
BstMWI GCNNNNNNNGC 6 cut(s) 167, 697, 1037, 1186, 1268, 1547
BstNI CCWGG 6 cut(s) 543, 822, 1152, 1748, 1991, 2296
BstNSI RCATGY 2 cut(s) 519, 1701
BstSCI CCNGG 8 cut(s) 42, 429, 541, 820, 1150, 1746, 1989, 2294
BstSFI CTRYAG 3 cut(s) 405, 785, 1533
BstV1I GCAGC 4 cut(s) 1258, 1280, 1756, 2106
BstX2I RGATCY 2 cut(s) 126, 218
BstXI CCANNNNNNTGG 1 cut(s) 1506
BstYI RGATCY 2 cut(s) 126, 218
BstZ17I GTATAC 1 cut(s) 1939
BsuRI GGCC 2 cut(s) 74, 411
BtrI CACGTC 1 cut(s) 1248
BtsCI GGATG 6 cut(s) 498, 883, 1055, 1515, 1685, 1772
BtsI GCAGTG 2 cut(s) 1206, 1764
BtsIMutI CAGTG 6 cut(s) 451, 645, 869, 1206, 1764, 2068
Cac8I GCNNGC 5 cut(s) 30, 413, 417, 679, 983
CaiI CAGNNNCTG 2 cut(s) 221, 754
CciI TCATGA 1 cut(s) 568
CfoI GCGC 1 cut(s) 1929
Cfr13I GGNCC 1 cut(s) 2298
CseI GACGC 1 cut(s) 176
CsiI ACCWGGT 1 cut(s) 1150
Csp6I GTAC 6 cut(s) 521, 937, 1100, 1308, 1963, 2115
CspCI CAANNNNNGTGG 2 cut(s) 1182, 1217
CviAII CATG 9 cut(s) 365, 516, 569, 682, 1234, 1282, 1506, 1698, 1971
CviQI GTAC 6 cut(s) 521, 937, 1100, 1308, 1963, 2115
DdeI CTNAG 8 cut(s) 524, 755, 1036, 1083, 1563, 1619, 1900, 1923
DpnI GATC 3 cut(s) 128, 220, 1855
DpnII GATC 3 cut(s) 126, 218, 1853
DraI TTTAAA 1 cut(s) 1693
Eam1104I CTCTTC 2 cut(s) 1014, 1703
EarI CTCTTC 2 cut(s) 1014, 1703
Eco130I CCWWGG 4 cut(s) 130, 293, 371, 505
Eco24I GRGCYC 1 cut(s) 702
Eco32I GATATC 1 cut(s) 465
Eco47I GGWCC 1 cut(s) 2298
Eco57I CTGAAG 4 cut(s) 427, 645, 1825, 2166
Eco88I CYCGRG 1 cut(s) 2224
EcoRI GAATTC 1 cut(s) 825
EcoRII CCWGG 6 cut(s) 541, 820, 1150, 1746, 1989, 2294
EcoRV GATATC 1 cut(s) 465
EcoT14I CCWWGG 4 cut(s) 130, 293, 371, 505
EcoT22I ATGCAT 1 cut(s) 1880
EcoT38I GRGCYC 1 cut(s) 702
ErhI CCWWGG 4 cut(s) 130, 293, 371, 505
FaeI CATG 9 cut(s) 368, 519, 572, 685, 1237, 1285, 1509, 1701, 1974
FalI AAGNNNNNCTT 4 cut(s) 1086, 1118, 1530, 1562
FaqI GGGAC 2 cut(s) 26, 179
FatI CATG 9 cut(s) 364, 515, 568, 681, 1233, 1281, 1505, 1697, 1970
FauI CCCGC 1 cut(s) 1677
FauNDI CATATG 1 cut(s) 958
FblI GTMKAC 2 cut(s) 642, 1938
Fnu4HI GCNGC 4 cut(s) 1269, 1272, 1770, 2120
FokI GGATG 6 cut(s) 505, 890, 1042, 1522, 1692, 1759
FriOI GRGCYC 1 cut(s) 702
Fsp4HI GCNGC 4 cut(s) 1269, 1272, 1770, 2120
FspBI CTAG 3 cut(s) 1077, 1607, 1850
GlaI GCGC 1 cut(s) 1928
GluI GCNGC 4 cut(s) 1269, 1272, 1770, 2120
GsaI CCCAGC 1 cut(s) 1502
GsuI CTGGAG 3 cut(s) 525, 987, 1747
HaeIII GGCC 2 cut(s) 74, 411
HapII CCGG 3 cut(s) 44, 430, 858
HgaI GACGC 1 cut(s) 176
HhaI GCGC 1 cut(s) 1929
Hin1II CATG 9 cut(s) 368, 519, 572, 685, 1237, 1285, 1509, 1701, 1974
Hin6I GCGC 1 cut(s) 1927
HinP1I GCGC 1 cut(s) 1927
HindIII AAGCTT 2 cut(s) 417, 1439
HinfI GANTC 8 cut(s) 576, 665, 1022, 1430, 1525, 1577, 2215, 2229
HpaII CCGG 3 cut(s) 44, 430, 858
HphI GGTGA 1 cut(s) 1838
Hpy166II GTNNAC 4 cut(s) 513, 643, 1829, 1939
Hpy188I TCNGA 4 cut(s) 555, 664, 1582, 1924
Hpy8I GTNNAC 4 cut(s) 513, 643, 1829, 1939
HpyAV CCTTC 9 cut(s) 12, 64, 80, 908, 1375, 1539, 1628, 2030, 2299
HpyCH4III ACNGT 4 cut(s) 1015, 1321, 1412, 1895
HpyCH4IV ACGT 1 cut(s) 1247
HpyF10VI GCNNNNNNNGC 6 cut(s) 167, 697, 1037, 1186, 1268, 1547
HpyF3I CTNAG 8 cut(s) 524, 755, 1036, 1083, 1563, 1619, 1900, 1923
HpySE526I ACGT 1 cut(s) 1247
Hsp92II CATG 9 cut(s) 368, 519, 572, 685, 1237, 1285, 1509, 1701, 1974
HspAI GCGC 1 cut(s) 1927
KpnI GGTACC 1 cut(s) 940
Kzo9I GATC 3 cut(s) 126, 218, 1853
LmnI GCTCC 7 cut(s) 373, 473, 544, 854, 1204, 1684, 1790
Lsp1109I GCAGC 4 cut(s) 1258, 1280, 1756, 2106
LweI GCATC 2 cut(s) 1249, 1781
MabI ACCWGGT 1 cut(s) 1150
MaeI CTAG 3 cut(s) 1077, 1607, 1850
MaeII ACGT 1 cut(s) 1247
MaeIII GTNAC 7 cut(s) 400, 989, 1044, 1519, 1889, 2073, 2158
MalI GATC 3 cut(s) 128, 220, 1855
MboI GATC 3 cut(s) 126, 218, 1853
MboII GAAGA 8 cut(s) 273, 384, 785, 903, 1031, 1606, 1720, 1831
MfeI CAATTG 2 cut(s) 81, 1194
MflI RGATCY 2 cut(s) 126, 218
MhlI GDGCHC 2 cut(s) 702, 1795
MlyI GAGTC 2 cut(s) 1031, 1534
MmeI TCCRAC 2 cut(s) 279, 2078
Mph1103I ATGCAT 1 cut(s) 1880
MroXI GAANNNNTTC 2 cut(s) 1101, 2219
MseI TTAA 5 cut(s) 239, 422, 426, 1692, 1760
MslI CAYNNNNRTG 1 cut(s) 65
MspA1I CMGCKG 1 cut(s) 1271
MspI CCGG 3 cut(s) 44, 430, 858
MspR9I CCNGG 8 cut(s) 44, 431, 543, 822, 1152, 1748, 1991, 2296
MunI CAATTG 2 cut(s) 81, 1194
Mva1269I GAATGC 1 cut(s) 1845
MvaI CCWGG 6 cut(s) 543, 822, 1152, 1748, 1991, 2296
MwoI GCNNNNNNNGC 6 cut(s) 167, 697, 1037, 1186, 1268, 1547
NciI CCSGG 2 cut(s) 44, 431
NdeI CATATG 1 cut(s) 958
NdeII GATC 3 cut(s) 126, 218, 1853
NlaIII CATG 9 cut(s) 368, 519, 572, 685, 1237, 1285, 1509, 1701, 1974
NlaIV GGNNCC 5 cut(s) 48, 540, 856, 938, 1473
NmuCI GTSAC 4 cut(s) 989, 1519, 2073, 2158
NsiI ATGCAT 1 cut(s) 1880
NspI RCATGY 2 cut(s) 519, 1701
PacI TTAATTAA 1 cut(s) 426
PagI TCATGA 1 cut(s) 568
PctI GAATGC 1 cut(s) 1845
PdmI GAANNNNTTC 2 cut(s) 1101, 2219
PfeI GAWTC 6 cut(s) 576, 665, 1430, 1577, 2215, 2229
PflMI CCANNNNNTGG 1 cut(s) 2060
PfoI TCCNGGA 1 cut(s) 42
PkrI GCNGC 4 cut(s) 1270, 1273, 1771, 2121
PleI GAGTC 2 cut(s) 1030, 1533
PpsI GAGTC 2 cut(s) 1030, 1533
Psp6I CCWGG 6 cut(s) 541, 820, 1150, 1746, 1989, 2294
PspFI CCCAGC 1 cut(s) 1498
PspGI CCWGG 6 cut(s) 541, 820, 1150, 1746, 1989, 2294
PspN4I GGNNCC 5 cut(s) 48, 540, 856, 938, 1473
PspPI GGNCC 1 cut(s) 2298
PstI CTGCAG 1 cut(s) 1537
PstNI CAGNNNCTG 2 cut(s) 221, 754
PsuI RGATCY 2 cut(s) 126, 218
PvuII CAGCTG 1 cut(s) 1271
RsaI GTAC 6 cut(s) 522, 938, 1101, 1309, 1964, 2116
RsaNI GTAC 6 cut(s) 521, 937, 1100, 1308, 1963, 2115
RseI CAYNNNNRTG 1 cut(s) 65
SaqAI TTAA 5 cut(s) 239, 422, 426, 1692, 1760
SatI GCNGC 4 cut(s) 1269, 1272, 1770, 2120
Sau3AI GATC 3 cut(s) 126, 218, 1853
Sau96I GGNCC 1 cut(s) 2298
ScaI AGTACT 1 cut(s) 1101
SchI GAGTC 2 cut(s) 1031, 1534
ScrFI CCNGG 8 cut(s) 44, 431, 543, 822, 1152, 1748, 1991, 2296
SduI GDGCHC 2 cut(s) 702, 1795
SexAI ACCWGGT 1 cut(s) 1150
SfaNI GCATC 2 cut(s) 1249, 1781
SfcI CTRYAG 3 cut(s) 405, 785, 1533
SinI GGWCC 1 cut(s) 2298
SmiMI CAYNNNNRTG 1 cut(s) 65
SsiI CCGC 1 cut(s) 1670
SspI AATATT 2 cut(s) 1300, 1860
SspMI CTAG 3 cut(s) 1077, 1607, 1850
StyD4I CCNGG 8 cut(s) 42, 429, 541, 820, 1150, 1746, 1989, 2294
StyI CCWWGG 4 cut(s) 130, 293, 371, 505
TaaI ACNGT 4 cut(s) 1015, 1321, 1412, 1895
TaiI ACGT 1 cut(s) 1250
TaqI TCGA 5 cut(s) 16, 781, 1368, 1433, 2039
TatI WGTACW 3 cut(s) 1099, 1307, 1962
TfiI GAWTC 6 cut(s) 576, 665, 1430, 1577, 2215, 2229
Tru1I TTAA 5 cut(s) 239, 422, 426, 1692, 1760
Tru9I TTAA 5 cut(s) 239, 422, 426, 1692, 1760
TscAI CASTG 6 cut(s) 451, 652, 876, 1206, 1771, 2075
TseFI GTSAC 4 cut(s) 989, 1519, 2073, 2158
TseI GCWGC 4 cut(s) 1268, 1271, 1769, 2119
Tsp45I GTSAC 4 cut(s) 989, 1519, 2073, 2158
TspGWI ACGGA 1 cut(s) 312
TspRI CASTG 6 cut(s) 451, 652, 876, 1206, 1771, 2075
Van91I CCANNNNNTGG 1 cut(s) 2060
VpaK11BI GGWCC 1 cut(s) 2298
XapI RAATTY 5 cut(s) 183, 359, 600, 825, 1651
XceI RCATGY 2 cut(s) 519, 1701
XmiI GTMKAC 2 cut(s) 642, 1938
XmnI GAANNNNTTC 2 cut(s) 1101, 2219
XspI CTAG 3 cut(s) 1077, 1607, 1850
ZrmI AGTACT 1 cut(s) 1101
Zsp2I ATGCAT 1 cut(s) 1880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.