Rmu_sc0009165.1_g000008
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009165.1
Physical Location & Seq
Reverse (-)
30767 .. 38119
7353 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009165.1_g000008.1.cds

Sequence Viewer

Length: 4245 bp
atggagctaacacaagttaagagagatgtccactcatcgtttcgacaccaagcttcgagctactcaatcaaagcggaggatgaggaaactcagctgcagtgggctgccattgagagattgcctacattcagaaggctgaggacctcacttttcgacctcggtgatagcgaaaatggaaaaaccagtggcaaagagtgtgcagggaagaaggtggttgatgttaccaagttgggagcagatgagaggcattttttcattgagaagatcataaagcacattgagcatgataatctgaggctgctacaaaaaatgagagaaaggatagacagagtgaatgtgaaattgccaactgtggaggtgaggtacaagagtttgtgtgtggaagccgagtgtgaagtagtacaaggaaagccgctcccgacgctgtggaactcctttctaagcttgttatcagtttttcgaaaggtaatgtggtgcaagtctcaagatgcaaagattagcgttctcacagacgtcagtggcgtcatcaaaccttcaaggcttactctccttcttggtcccccggggtgtggtaaaacgaccttcttattggcacttgccggaaaactggataaatccctgaaggttgcaggggagatttcatacaatggttacaagctagatgagtttgttcctcaaaaaacttcagcgtacataagccaacacgaccttcacgtacctgagatgactgtaagagaaacaatcgagttttcagcccgctgtcaaggtgttggaagcagagctgatataatgctagagattagcaggagagaaaaggaagcaggaattgttcctgatccagatattgacacctacatgaagatgctaggactagatatctgcagtgacacaatggttggtgatgcattacaaagaggtatttcgggtggccaaaagaaaaggctgacaacaggagagatgattgtcggtcccacaaaagcgctatttatggatgaaatatcaactggattagacagctctacgacttttcagatagtcacatatctgcagcagttggtgcacataacagatacaactgcattggtgtcacttctacaaccagcacctgagacattcgatttatttgatgatgtgatactaatggcagaggggaagatagtttaccatggtcctcggagtcatgcacttcagtttttcgaagattgtggttttaagtgccctccaagaaagggtgctgcagattatcttcaggaggtaatctcaaagaaggatcaagcacaatactggaagcatgataacattccctatgattatgtttctgtggacaaattctctcagcttttcagagcaagttacttgggaaagaagttaattgatgagctctcaaaaccatatgagaaatcaccgggccaggataaggctttatcatttagcatctactctgtcagaaaatgggaattgttcaaagcttgtatgggtagagagctgcttcttatgaaacgaaattcctttgtttatgtattcaaaacagcgcagcttgtcatcactgcacttttgacaacgacagtattcatacgtactcagatggatgtggatttgacaagtgcaaattattttatgggtgcattgttctatacacttgtgagacttatgaccaatggagttgcagaactgtccttgactatcactagactaccagtggttgataagcaaagagccttctatctttatccagcatggtcctattcaattccagcctctctcctgaagattccattttcactgagtgatgcggtgttgtggacagcaataacttactatggtgttgggtatagccctgaaataaaaaggttcttctgccagctccttgtgctgtttgctctgcatcttgcatcaacatccatgtgtcgtttgattgcagtaattttccgatccatggttgttgcaacaactattggtactttaatcttggtactaatgtttgtatttggaggcttcattttgccaccaccctcattacctgtttggttgaagtggggattctggtgttctcctatgacttatggggaaatagctgcaagtctgaatgaattccgtgctcctcgatggcaaaaggtttcgagaggaaatacaaccttggggaatgaaattctaaccagtcatggtttgaactttggtagctacttctactggatatcagtaggggctttatttgggttcacagctattttcgatcttggatttgttttagcattaacttacttaaaatctccaaagatgtctcgtgctattatttcgaaaaaaagattatctcaactcaaaggacaagattcttggaacaagaccggtgcaaagtcagataatgtatcaaccccagctgatttttcccaaaccatggaagaaacagggaagatggttctgccatttgagccgctgacaatctcatttaaggatgtgcagtacagtgttgacatcccaccggaaatgaaaaggcacagtttcgatcagaaaaaacttcagctgcttaaagatattacaggagcatttaggccgggagttcttacagcattgatgggagtcagtggggctgggaaaacaactcttatggatgttctttcgggaaggaaaactggaggcactattgaaggagatataagaataggaggctatcccaaagtccagaagacatttgctagaatatcaggttactgtgaacaatttgatatacattctccatgcatcacagtaggagagtcggttatgttttcagcttggttgaggttgccacccgaaattgatcaagacacaaaagctaaatttgtagaagaagttattgaaacaattgaattggaggatataagagattctttagttggcattcctggccaaagtggcctatcaaccgaacagcgcaaaaggctaacaattgcagttgagcttgtttccaatccatcaataatatttatggatgaacctacatcaggactagatgccagagcagcagcaattgtcatgcgtgctgtgaagaatgtagttgccacaggaagaacaactatttgcacaatccaccaacctagcattgatatctttgaggcttttgatgagttaattctgatgaaaatgggagggcaaattatctattctggaagtctgggccatcattcgagtaatctcattgaatattttgagggtattcctagtgtaccaaagatcaaagataactataaccccgcaacatggatgttagaagttacttcctcttcagtagaagcagaactcggtttagatttttcgaacatttataaagactctactctgtataaagacacagttgaattggtgagacagataagtaaaccaaagccaggctcaagagctttgcaattttccacccaatttccacaaaatagctgggtgcagtttagggcctgcttatggaaacaacacttatcctactggagaagtcctgaatacaatctagcacgtttcatgttcatgactgttgcctcagtgttgtttggtgcaatcttctggcaaaaggggaaggaaataaataatgagcaggatttgctgactatacttgggtccatgtacattgctgtaatattcctgggaataaacaattgttcaacagttcttccttatgtggcaactgagcgaaccgttttgtaccgcgaaagatttgctgggatgtactcatcaaaggcttattcctttgcacaggtggccatggaaataccttatacaatgttgcaagcaattttatatgtggtcattacatatcctacgataggctactattggactgcttccaaggttttttggtacttctatgcaaccttctgtacatttctatactttgtataccttgggatgttgttagtttctttgagctcagacatggaagtagcttcgatattggccactgcaatctacaccatattgaatcttttctccggcttcctcatgcctggaccgaaaattccgaagtggtggatttggtgctactggatctgtcctacatcatggtcactaaatggcctcctgacttcacaatatggagacatggacaaagagatattaatttttggagagcataaaacagttgcttccttcgtacaagattattatggttttcatcatgatcttttaccccttgtggctattgctctgattaccttcccaattgcttttgcttttctctttgcctattttatagggagattaaatttccaaaggcgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1414

Amino Acids

159.57

Weight (kDa)

8.48

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15230 AT4G15230 AT4G15230 AT4G15230 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15236
fragaria_vesca FvH4_4g21360 FvH4_4g21360 FvH4_4g21390 FvH4_6g49431 FvH4_6g49450
malus_domestica MD09G1044300.v1.1 MD16G1137900.v1.1 MD16G1138000.v1.1
prunus_persica Prupe.1G106800_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.3G273300_v2.0.a1
pyrus_communis pycom111g03460 pycom16g12210
rosa_chinensis RchiOBHm_Chr2g0169331 RchiOBHm_Chr2g0169361 RchiOBHm_Chr2g0169371 RchiOBHm_Chr2g0169381 RchiOBHm_Chr2g0169411 RchiOBHm_Chr4g0427141 RchiOBHm_Chr4g0427321
rosa_laevigata RLG00000007252 RLG00000007258 RLG00000013974 RLG00000021856 RLG00000021857 RLG00000021858 RLG00000021859
rosa_multiflora Rmu_sc0000648.1_g000007 Rmu_sc0000648.1_g000009 Rmu_sc0003813.1_g000016 Rmu_sc0009165.1_g000008 Rmu_sc0022554.1_g000001
rosa_roxburghii Rroxscaffold_2G00082200 Rroxscaffold_2G00082230 Rroxscaffold_5G00368960 Rroxscaffold_5G00369010 Rroxscaffold_7G00200390
rosa_rugosa Rorug02G0539500 Rorug02G0539600 Rorug02G0539700 Rorug04G0216400 Rorug04G0216500 Rorug04G0216500 Rorug04G0216600
rosa_samantha Rh2AG610800 Rh2AG611000 Rh2AG611100 Rh2CG592800 Rh2CG593000 Rh2CG593200 Rh2DG634900 Rh2DG635100 Rh2DG635200 Rh2DG635400 Rh4AG272200 Rh4AG272900 Rh4DG275600 Rh4DG276000
rosa_wichuraiana Rw2G050640 Rw2G050660 Rw2G050670 Rw2G050680 Rw4G023610 Rw4G023680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3303
AatII GACGTC 1 cut(s) 516
AccB7I CCANNNNNTGG 1 cut(s) 2395
AccBSI CCGCTC 1 cut(s) 415
AccI GTMKAC 1 cut(s) 3864
AccII CGCG 1 cut(s) 3675
AciI CCGC 7 cut(s) 74, 413, 757, 1793, 2432, 3231, 3673
AclWI GGATC 4 cut(s) 830, 1278, 1926, 4019
AcoI YGGCCR 4 cut(s) 928, 2884, 3726, 3921
AcsI RAATTY 7 cut(s) 1328, 1504, 2090, 2148, 2816, 3981, 4228
AcuI CTGAAG 7 cut(s) 641, 669, 1172, 1232, 1787, 2501, 3246
AcyI GRCGYC 2 cut(s) 513, 522
AdeI CACNNNGTG 1 cut(s) 1787
AfeI AGCGCT 1 cut(s) 981
AgeI ACCGGT 1 cut(s) 2345
AjnI CCWGG 5 cut(s) 1410, 2881, 3364, 3609, 3970
AjuI GAANNNNNNNTTGG 2 cut(s) 693, 725
Alw21I GWGCWC 4 cut(s) 1062, 1383, 2101, 3896
Alw26I GTCTC 6 cut(s) 486, 1103, 1639, 2286, 3337, 4056
Alw44I GTGCAC 1 cut(s) 1058
AlwI GGATC 4 cut(s) 830, 1278, 1926, 4019
AlwNI CAGNNNCTG 1 cut(s) 1106
Ama87I CYCGRG 1 cut(s) 562
Aor51HI AGCGCT 1 cut(s) 981
ApaLI GTGCAC 1 cut(s) 1058
ApoI RAATTY 7 cut(s) 1328, 1504, 2090, 2148, 2816, 3981, 4228
AseI ATTAAT 1 cut(s) 4082
AsiGI ACCGGT 1 cut(s) 2345
Asp700I GAANNNNTTC 2 cut(s) 2090, 3950
AspLEI GCGC 3 cut(s) 982, 1534, 2913
AsuC2I CCSGG 4 cut(s) 563, 564, 1407, 2553
AsuHPI GGTGA 5 cut(s) 173, 370, 911, 1395, 3352
AsuII TTCGAA 4 cut(s) 460, 1197, 2297, 3293
AvaI CYCGRG 1 cut(s) 562
AvaII GGWCC 7 cut(s) 141, 557, 968, 1169, 1740, 3585, 3974
BaeGI GKGCMC 2 cut(s) 1062, 1220
BaeI ACNNNNGTAYC 4 cut(s) 355, 388, 1964, 1997
BalI TGGCCA 4 cut(s) 930, 2886, 3728, 3923
BanII GRGCYC 2 cut(s) 1383, 3896
BarI GAAGNNNNNNTAC 2 cut(s) 1145, 1177
BauI CACGAG 1 cut(s) 2283
BbsI GAAGAC 1 cut(s) 2690
Bbv12I GWGCWC 4 cut(s) 1062, 1383, 2101, 3896
BbvCI CCTCAGC 1 cut(s) 137
BccI CCATC 6 cut(s) 1579, 2100, 2407, 2566, 2959, 3165
BcgI CGANNNNNNTGC 2 cut(s) 3665, 3699
BciT130I CCWGG 5 cut(s) 1412, 2883, 3366, 3611, 3972
BclI TGATCA 1 cut(s) 2797
BcnI CCSGG 4 cut(s) 563, 564, 1407, 2553
BcoDI GTCTC 6 cut(s) 486, 1103, 1639, 2286, 3337, 4056
BfmI CTRYAG 4 cut(s) 95, 880, 1046, 1236
BfoI RGCGCY 1 cut(s) 983
BglI GCCNNNNNGGC 1 cut(s) 2892
Bme1390I CCNGG 9 cut(s) 563, 564, 1407, 1412, 2553, 2883, 3366, 3611, 3972
Bme18I GGWCC 7 cut(s) 141, 557, 968, 1169, 1740, 3585, 3974
BmeT110I CYCGRG 1 cut(s) 562
BmiI GGNNCC 3 cut(s) 559, 970, 3586
BmrFI CCNGG 9 cut(s) 563, 564, 1407, 1412, 2553, 2883, 3366, 3611, 3972
BmsI GCATC 9 cut(s) 478, 852, 892, 1443, 1780, 1894, 1901, 2748, 2980
BpiI GAAGAC 1 cut(s) 2690
BplI GAGNNNNNCTC 2 cut(s) 1244, 1276
BpmI CTGGAG 2 cut(s) 2652, 3478
Bpu10I CCTNAGC 1 cut(s) 137
Bpu14I TTCGAA 4 cut(s) 460, 1197, 2297, 3293
BpuEI CTTGAG 2 cut(s) 468, 3355
BpuMI CCSGG 4 cut(s) 563, 564, 1407, 2553
BsaAI YACGTR 2 cut(s) 715, 1577
BsaHI GRCGYC 2 cut(s) 513, 522
BsaWI WCCGGW 2 cut(s) 2345, 2479
BsaXI ACNNNNNCTCC 4 cut(s) 347, 377, 2742, 2772
Bse118I RCCGGY 1 cut(s) 2345
Bse3DI GCAATG 1 cut(s) 3594
BseBI CCWGG 5 cut(s) 1412, 2883, 3366, 3611, 3972
BseMI GCAATG 1 cut(s) 3594
BseRI GAGGAG 1 cut(s) 2091
BseSI GKGCMC 2 cut(s) 1062, 1220
BseYI CCCAGC 4 cut(s) 2374, 2588, 3411, 3686
BsgI GTGCAG 4 cut(s) 219, 1533, 2477, 3437
Bsh1236I CGCG 1 cut(s) 3675
BshTI ACCGGT 1 cut(s) 2345
BsiHKAI GWGCWC 4 cut(s) 1062, 1383, 2101, 3896
BsiHKCI CYCGRG 1 cut(s) 562
BsiSI CCGG 7 cut(s) 563, 600, 1406, 2346, 2480, 2552, 3957
BslFI GGGAC 2 cut(s) 543, 954
BsmAI GTCTC 6 cut(s) 486, 1103, 1639, 2286, 3337, 4056
BsmFI GGGAC 2 cut(s) 543, 954
BsmI GAATGC 1 cut(s) 2877
BsoBI CYCGRG 1 cut(s) 562
Bsp119I TTCGAA 4 cut(s) 460, 1197, 2297, 3293
Bsp1286I GDGCHC 5 cut(s) 1062, 1220, 1383, 2101, 3896
Bsp1407I TGTACA 2 cut(s) 3591, 3845
Bsp19I CCATGG 4 cut(s) 1165, 1935, 2394, 3729
BspACI CCGC 7 cut(s) 74, 413, 757, 1793, 2432, 3231, 3673
BspFNI CGCG 1 cut(s) 3675
BspHI TCATGA 2 cut(s) 3495, 4141
BspLI GGNNCC 3 cut(s) 559, 970, 3586
BspMAI CTGCAG 4 cut(s) 99, 884, 1050, 1240
BspPI GGATC 4 cut(s) 830, 1278, 1926, 4019
BspT104I TTCGAA 4 cut(s) 460, 1197, 2297, 3293
BsrBI CCGCTC 1 cut(s) 415
BsrDI GCAATG 1 cut(s) 3594
BsrFI RCCGGY 1 cut(s) 2345
BsrGI TGTACA 2 cut(s) 3591, 3845
BssAI RCCGGY 1 cut(s) 2345
BssNAI GTATAC 1 cut(s) 3865
BssNI GRCGYC 2 cut(s) 513, 522
BssSI CACGAG 1 cut(s) 2283
BssT1I CCWWGG 7 cut(s) 1165, 1935, 2136, 2394, 3729, 3813, 3868
Bst1107I GTATAC 1 cut(s) 3865
Bst2BI CACGAG 1 cut(s) 2283
Bst2UI CCWGG 5 cut(s) 1412, 2883, 3366, 3611, 3972
Bst6I CTCTTC 1 cut(s) 3265
BstACI GRCGYC 2 cut(s) 513, 522
BstAPI GCANNNNNTGC 2 cut(s) 1057, 3568
BstAUI TGTACA 2 cut(s) 3591, 3845
BstBAI YACGTR 2 cut(s) 715, 1577
BstBI TTCGAA 4 cut(s) 460, 1197, 2297, 3293
BstC8I GCNNGC 5 cut(s) 757, 1862, 3018, 3430, 3756
BstDSI CCRYGG 4 cut(s) 1165, 1935, 2394, 3729
BstENI CCTNNNNNAGG 2 cut(s) 2979, 3789
BstFNI CGCG 1 cut(s) 3675
BstH2I RGCGCY 1 cut(s) 983
BstHHI GCGC 3 cut(s) 982, 1534, 2913
BstMAI GTCTC 6 cut(s) 486, 1103, 1639, 2286, 3337, 4056
BstNI CCWGG 5 cut(s) 1412, 2883, 3366, 3611, 3972
BstSCI CCNGG 9 cut(s) 561, 562, 1405, 1410, 2551, 2881, 3364, 3609, 3970
BstSFI CTRYAG 4 cut(s) 95, 880, 1046, 1236
BstSLI GKGCMC 2 cut(s) 1062, 1220
BstSNI TACGTA 1 cut(s) 1577
BstUI CGCG 1 cut(s) 3675
BstV2I GAAGAC 1 cut(s) 2690
BstX2I RGATCY 1 cut(s) 4011
BstYI RGATCY 1 cut(s) 4011
BstZ17I GTATAC 1 cut(s) 3865
BtgI CCRYGG 4 cut(s) 1165, 1935, 2394, 3729
BtsI GCAGTG 4 cut(s) 104, 889, 1545, 3924
Cac8I GCNNGC 5 cut(s) 757, 1862, 3018, 3430, 3756
CaiI CAGNNNCTG 1 cut(s) 1106
CciI TCATGA 2 cut(s) 3495, 4141
CfoI GCGC 3 cut(s) 982, 1534, 2913
Cfr10I RCCGGY 1 cut(s) 2345
Cfr9I CCCGGG 1 cut(s) 562
CseI GACGC 2 cut(s) 430, 511
CspAI ACCGGT 1 cut(s) 2345
DraIII CACNNNGTG 1 cut(s) 1787
EaeI YGGCCR 4 cut(s) 928, 2884, 3726, 3921
Eam1104I CTCTTC 1 cut(s) 3265
EarI CTCTTC 1 cut(s) 3265
Ecl136II GAGCTC 2 cut(s) 1381, 3894
Eco105I TACGTA 1 cut(s) 1577
Eco130I CCWWGG 7 cut(s) 1165, 1935, 2136, 2394, 3729, 3813, 3868
Eco24I GRGCYC 2 cut(s) 1383, 3896
Eco32I GATATC 3 cut(s) 877, 2196, 3085
Eco47I GGWCC 7 cut(s) 141, 557, 968, 1169, 1740, 3585, 3974
Eco47III AGCGCT 1 cut(s) 981
Eco53kI GAGCTC 2 cut(s) 1381, 3894
Eco57I CTGAAG 7 cut(s) 641, 669, 1172, 1232, 1787, 2501, 3246
Eco88I CYCGRG 1 cut(s) 562
EcoICRI GAGCTC 2 cut(s) 1381, 3894
EcoNI CCTNNNNNAGG 2 cut(s) 2979, 3789
EcoO109I RGGNCCY 2 cut(s) 141, 3426
EcoRI GAATTC 1 cut(s) 2090
EcoRII CCWGG 5 cut(s) 1410, 2881, 3364, 3609, 3970
EcoRV GATATC 3 cut(s) 877, 2196, 3085
EcoT14I CCWWGG 7 cut(s) 1165, 1935, 2136, 2394, 3729, 3813, 3868
EcoT22I ATGCAT 2 cut(s) 907, 2741
EcoT38I GRGCYC 2 cut(s) 1383, 3896
ErhI CCWWGG 7 cut(s) 1165, 1935, 2136, 2394, 3729, 3813, 3868
FalI AAGNNNNNCTT 2 cut(s) 2851, 2883
FaqI GGGAC 2 cut(s) 543, 954
FauI CCCGC 2 cut(s) 764, 3238
FauNDI CATATG 1 cut(s) 1393
FbaI TGATCA 1 cut(s) 2797
FblI GTMKAC 1 cut(s) 3864
FriOI GRGCYC 2 cut(s) 1383, 3896
GlaI GCGC 3 cut(s) 981, 1533, 2912
GsaI CCCAGC 4 cut(s) 2378, 2592, 3415, 3690
GsuI CTGGAG 2 cut(s) 2652, 3478
HaeII RGCGCY 1 cut(s) 983
HapII CCGG 7 cut(s) 563, 600, 1406, 2346, 2480, 2552, 3957
HgaI GACGC 2 cut(s) 430, 511
HhaI GCGC 3 cut(s) 982, 1534, 2913
Hin1I GRCGYC 2 cut(s) 513, 522
Hin6I GCGC 3 cut(s) 980, 1532, 2911
HinP1I GCGC 3 cut(s) 980, 1532, 2911
HincII GTYRAC 1 cut(s) 2470
HindII GTYRAC 1 cut(s) 2470
HindIII AAGCTT 3 cut(s) 51, 442, 1467
HinfI GANTC 9 cut(s) 1177, 1771, 2040, 2330, 2577, 2753, 2864, 3308, 3946
HpaII CCGG 7 cut(s) 563, 600, 1406, 2346, 2480, 2552, 3957
HphI GGTGA 5 cut(s) 173, 370, 911, 1395, 3352
Hpy99I CGWCG 1 cut(s) 424
HpyCH4IV ACGT 4 cut(s) 513, 714, 1576, 3484
HpySE526I ACGT 4 cut(s) 513, 714, 1576, 3484
Hsp92I GRCGYC 2 cut(s) 513, 522
HspAI GCGC 3 cut(s) 980, 1532, 2911
Ksp22I TGATCA 1 cut(s) 2797
LmnI GCTCC 6 cut(s) 4, 233, 420, 1869, 2104, 2540
LweI GCATC 9 cut(s) 478, 852, 892, 1443, 1780, 1894, 1901, 2748, 2980
MaeII ACGT 4 cut(s) 513, 714, 1576, 3484
MaeIII GTNAC 9 cut(s) 220, 650, 884, 1036, 1086, 1352, 2705, 3250, 4029
MbiI CCGCTC 1 cut(s) 415
MfeI CAATTG 5 cut(s) 2841, 2925, 3006, 3622, 4185
MflI RGATCY 1 cut(s) 4011
MhlI GDGCHC 5 cut(s) 1062, 1220, 1383, 2101, 3896
MlsI TGGCCA 4 cut(s) 930, 2886, 3728, 3923
MluNI TGGCCA 4 cut(s) 930, 2886, 3728, 3923
MlyI GAGTC 4 cut(s) 1186, 2586, 2762, 3302
MmeI TCCRAC 1 cut(s) 751
Mox20I TGGCCA 4 cut(s) 930, 2886, 3728, 3923
Mph1103I ATGCAT 2 cut(s) 907, 2741
MroXI GAANNNNTTC 2 cut(s) 2090, 3950
MscI TGGCCA 4 cut(s) 930, 2886, 3728, 3923
MslI CAYNNNNRTG 4 cut(s) 854, 860, 1903, 3494
Msp20I TGGCCA 4 cut(s) 930, 2886, 3728, 3923
MspA1I CMGCKG 5 cut(s) 94, 759, 2378, 2434, 2521
MspI CCGG 7 cut(s) 563, 600, 1406, 2346, 2480, 2552, 3957
MspR9I CCNGG 9 cut(s) 563, 564, 1407, 1412, 2553, 2883, 3366, 3611, 3972
MunI CAATTG 5 cut(s) 2841, 2925, 3006, 3622, 4185
Mva1269I GAATGC 1 cut(s) 2877
MvaI CCWGG 5 cut(s) 1412, 2883, 3366, 3611, 3972
MvnI CGCG 1 cut(s) 3675
NciI CCSGG 4 cut(s) 563, 564, 1407, 2553
NcoI CCATGG 4 cut(s) 1165, 1935, 2394, 3729
NdeI CATATG 1 cut(s) 1393
NlaIV GGNNCC 3 cut(s) 559, 970, 3586
NmeAIII GCCGAG 1 cut(s) 412
NmuCI GTSAC 4 cut(s) 884, 1036, 1086, 4029
NsiI ATGCAT 2 cut(s) 907, 2741
NspV TTCGAA 4 cut(s) 460, 1197, 2297, 3293
PagI TCATGA 2 cut(s) 3495, 4141
PcsI WCGNNNNNNNCGW 3 cut(s) 165, 519, 711
PctI GAATGC 1 cut(s) 2877
PdmI GAANNNNTTC 2 cut(s) 2090, 3950
PfeI GAWTC 5 cut(s) 1771, 2040, 2330, 2864, 3946
PflMI CCANNNNNTGG 1 cut(s) 2395
PinAI ACCGGT 1 cut(s) 2345
PleI GAGTC 4 cut(s) 1185, 2585, 2761, 3302
PpsI GAGTC 4 cut(s) 1185, 2585, 2761, 3302
Ppu21I YACGTR 2 cut(s) 715, 1577
PpuMI RGGWCCY 1 cut(s) 141
PshBI ATTAAT 1 cut(s) 4082
PsiI TTATAA 1 cut(s) 3303
Psp124BI GAGCTC 2 cut(s) 1383, 3896
Psp5II RGGWCCY 1 cut(s) 141
Psp6I CCWGG 5 cut(s) 1410, 2881, 3364, 3609, 3970
PspFI CCCAGC 4 cut(s) 2374, 2588, 3411, 3686
PspGI CCWGG 5 cut(s) 1410, 2881, 3364, 3609, 3970
PspN4I GGNNCC 3 cut(s) 559, 970, 3586
PspPPI RGGWCCY 1 cut(s) 141
PstI CTGCAG 4 cut(s) 99, 884, 1050, 1240
PstNI CAGNNNCTG 1 cut(s) 1106
PsuI RGATCY 1 cut(s) 4011
PvuII CAGCTG 3 cut(s) 94, 2378, 2521
RseI CAYNNNNRTG 4 cut(s) 854, 860, 1903, 3494
SacI GAGCTC 2 cut(s) 1383, 3896
SchI GAGTC 4 cut(s) 1186, 2586, 2762, 3302
ScrFI CCNGG 9 cut(s) 563, 564, 1407, 1412, 2553, 2883, 3366, 3611, 3972
SduI GDGCHC 5 cut(s) 1062, 1220, 1383, 2101, 3896
SfaNI GCATC 9 cut(s) 478, 852, 892, 1443, 1780, 1894, 1901, 2748, 2980
SfcI CTRYAG 4 cut(s) 95, 880, 1046, 1236
SfiI GGCCNNNNNGGCC 1 cut(s) 2892
SfuI TTCGAA 4 cut(s) 460, 1197, 2297, 3293
SinI GGWCC 7 cut(s) 141, 557, 968, 1169, 1740, 3585, 3974
SmaI CCCGGG 1 cut(s) 564
SmiMI CAYNNNNRTG 4 cut(s) 854, 860, 1903, 3494
SmlI CTYRAG 2 cut(s) 483, 3370
SmoI CTYRAG 2 cut(s) 483, 3370
SnaBI TACGTA 1 cut(s) 1577
SsiI CCGC 7 cut(s) 74, 413, 757, 1793, 2432, 3231, 3673
SspI AATATT 3 cut(s) 2961, 3182, 3606
SstI GAGCTC 2 cut(s) 1383, 3896
StyD4I CCNGG 9 cut(s) 561, 562, 1405, 1410, 2551, 2881, 3364, 3609, 3970
StyI CCWWGG 7 cut(s) 1165, 1935, 2136, 2394, 3729, 3813, 3868
TaiI ACGT 4 cut(s) 516, 717, 1579, 3487
TaqII GACCGA 2 cut(s) 956, 3991
TatI WGTACW 5 cut(s) 400, 2460, 3591, 3693, 3845
TauI GCSGC 2 cut(s) 415, 2434
TfiI GAWTC 5 cut(s) 1771, 2040, 2330, 2864, 3946
TseFI GTSAC 4 cut(s) 884, 1036, 1086, 4029
Tsp45I GTSAC 4 cut(s) 884, 1036, 1086, 4029
TspGWI ACGGA 1 cut(s) 2084
TspMI CCCGGG 1 cut(s) 562
Van91I CCANNNNNTGG 1 cut(s) 2395
VneI GTGCAC 1 cut(s) 1058
VpaK11BI GGWCC 7 cut(s) 141, 557, 968, 1169, 1740, 3585, 3974
VspI ATTAAT 1 cut(s) 4082
XagI CCTNNNNNAGG 2 cut(s) 2979, 3789
XapI RAATTY 7 cut(s) 1328, 1504, 2090, 2148, 2816, 3981, 4228
XcmI CCANNNNNNNNNTGG 1 cut(s) 3408
XmaI CCCGGG 1 cut(s) 562
XmiI GTMKAC 1 cut(s) 3864
XmnI GAANNNNTTC 2 cut(s) 2090, 3950
ZraI GACGTC 1 cut(s) 514
Zsp2I ATGCAT 2 cut(s) 907, 2741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.