Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000610

Physical Location & Seq

Genomic Coordinates Forward (+)

3441792 .. 3444593

Gene Structure 2802 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g05920.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGGTGTTGCTCTTTTTTCACTTGTTAGGCTGTTTGTTCTCTGTTGCATCACATTGGGTCTCATTCCTCAGCTAGCTCTTGCAAGCATTACAAGACACTACACCTTTGATGTTCAACTGCAAAATATGACACGGTTGTGCCACACGAAGAGCATTGTAACCATAAACGGTCAATTTCCCGGGTCTCGGATTGTTGCTAGGGAGGGTGATCGCCTCCTCATCAAAGTTGTCAACCATGTCCAAAGCAACATCTCCATCCATTGGCATGGGATTCGACAGCTACAAACTGGGTGGGCTGATGGTCCTGCATACATTACGCAATGCCCTATACAAACTGGCAACAGTTATGTGTACAATTTCACCATTTTAGGCCAAAGAGGCACTCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACAATCTATGGCCCCCTAATCATTCTTCCCAAACGTGGTGTTCCTTATCCATTTGCCAAACCCTATAAGGAAGTTCCCATCATCTTTGGAGAATGGTGGAATGCAGACACTGAAGCAGTCATAAAGCAGGCCTTGCAAACCGGTGGAGGGCCAAATGTTTCTGATGCTTACACAATCAATGGACTCCCAGGGCCTTTGTCTAACTGCTCTGCTAAAGACACTTTCAAGCTGAAGGTTCAAGCTGGAAAGACATACATGTTGCGCATAATCAACGCAGCACTGAACGACGAGCTCTTCTTCAGCATTGCAAACCACACCCTCAAAGTGGTGGAAGCTGATGCAGTTTACGTCAAACCTTTTGACACCAACACCATTCTCATTGCCCCCGGACAAACCACTAATGTTCTTCTCAAAACCAAACCCAGCCACCCAAACGCCTCATTTTTCATGACTGCAAGGCCGTATGTGACTGGTCTAGGCACCTTTGACAACTCCACTGTTGCTGGCATTCTAGAATATGAGTCAAATGCACTTCATTCAATCCTTCCAATGAAGAAACTTCCACTCCACAAACCAATTCTCCCAGTTCTAAATGACACGTCGTTTGCAACAAAATTCTCCAACAAACTCCGTAGCTTGAACACTCACCAGTTCCCAGCTAATGTTCCACAGAAAGTTGACAAGCGTTTGTTCTTCACAATAGGGCTTGGAACCAACCCATGTAGCCAGCAGAAGCACAACAACCAGACTTGTCAGGGACCTAATGGAACCATGTTTGCTGCTTCAATCAACAACATTTCTTTCACTATGCCAAACACTGCCCTACTCCAATCCCACTTCTTTGGCCAATCCAATGGGGTTTATTCCCCTTATTTTCCCATCAGTCCTCTCATTCCATTTAATTACACTGGAGCACAGCTGAACAATACCAATGTCAGCAATGGCACGAAGTTAATGGTGCTTCCCTTTAACACTAGTGTGGAGTTGGTGTTGCAGGATACCAGTATTCTTGGTGCTGAAAGTCATCCTCTTCATCTTCATGGCTTTAATTTCTTTGTTGTTGGTCAAGGTTTTGGCAACTTCGACCAAAATAAGGACCCTAAGAAGTTCAATCTGATCGACCCTGTTGAGAGAAACACCGTGGGTGTGCCCTCCGGCGGATGGGTTGCTATTCGGTTTCTAGCAGACAATCCAGGTGTATGGTTTATGCATTGCCACCTTGAGATCCATACTAGCTGGGGATTGAGGATGGCTTGGCTTGTCTTGGACGGAAAGCTTCCCAATCAAAAGTTGCTTCCTCCCCCGCTTGATCTTCCCAAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

582

Amino Acids

64.43

Weight (kDa)

9.33

Isoelectric Point (pI)

33.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 151	7.9e-41	Multicopper oxidase
Cu-oxidase	PF00394	164 - 315	2.6e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	437 - 563	4.7e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60020 AT5G60020 AT5G60020
fragaria_vesca	FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica	MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica	Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis	pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis	RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata	RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora	Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii	Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa	Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha	Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana	Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	683
AccB1I	GGYRCC	1 cut(s)	899
AccB7I	CCANNNNNTGG	1 cut(s)	261
AciI	CCGC	2 cut(s)	1578, 1724
AclWI	GGATC	1 cut(s)	1639
AcoI	YGGCCR	1 cut(s)	1264
AcsI	RAATTY	1 cut(s)	1034
AcuI	CTGAAG	3 cut(s)	552, 671, 703
AfaI	GTAC	1 cut(s)	353
AfiI	CCNNNNNNNGG	8 cut(s)	186, 261, 455, 567, 745, 1513, 1577, 1581
AflIII	ACRYGT	2 cut(s)	675, 1017
AgeI	ACCGGT	1 cut(s)	560
AgsI	TTSAA	7 cut(s)	116, 646, 659, 960, 1060, 1206, 1531
AhlI	ACTAGT	1 cut(s)	1394
AjiI	CACGTC	1 cut(s)	1020
AjnI	CCWGG	2 cut(s)	607, 1612
AleI	CACNNNNGTG	2 cut(s)	136, 1397
Alw21I	GWGCWC	2 cut(s)	714, 1336
Alw26I	GTCTC	2 cut(s)	65, 189
AlwI	GGATC	1 cut(s)	1639
AlwNI	CAGNNNCTG	1 cut(s)	530
Ama87I	CYCGRG	1 cut(s)	179
AoxI	GGCC	7 cut(s)	370, 430, 549, 569, 611, 878, 1264
ApeKI	GCWGC	2 cut(s)	695, 1199
ApoI	RAATTY	1 cut(s)	1034
ArsI	GACNNNNNNTTYG	2 cut(s)	1007, 1039
AsiGI	ACCGGT	1 cut(s)	560
AspLEI	GCGC	1 cut(s)	684
AspS9I	GGNCC	6 cut(s)	302, 431, 569, 611, 1178, 1516
AsuC2I	CCSGG	3 cut(s)	180, 181, 807
AsuHPI	GGTGA	3 cut(s)	218, 352, 1058
AsuNHI	GCTAGC	1 cut(s)	73
AvaI	CYCGRG	1 cut(s)	179
AvaII	GGWCC	3 cut(s)	302, 1178, 1516
BaeGI	GKGCMC	1 cut(s)	1572
BalI	TGGCCA	1 cut(s)	1266
BanI	GGYRCC	1 cut(s)	899
BanII	GRGCYC	1 cut(s)	714
Bbv12I	GWGCWC	2 cut(s)	714, 1336
BbvCI	CCTCAGC	1 cut(s)	69
BbvI	GCAGC	2 cut(s)	707, 1186
BccI	CCATC	6 cut(s)	263, 293, 506, 1307, 1575, 1663
BceAI	ACGGC	1 cut(s)	865
BcgI	CGANNNNNNTGC	2 cut(s)	254, 288
BciT130I	CCWGG	2 cut(s)	609, 1614
BciVI	GTATCC	1 cut(s)	1411
BcnI	CCSGG	3 cut(s)	180, 181, 807
BcoDI	GTCTC	2 cut(s)	65, 189
BcuI	ACTAGT	1 cut(s)	1394
BfaI	CTAG	7 cut(s)	74, 198, 896, 932, 1395, 1601, 1653
BfuI	GTATCC	1 cut(s)	1411
BglI	GCCNNNNNGGC	1 cut(s)	378
BisI	GCNGC	2 cut(s)	696, 1200
BlsI	GCNGC	2 cut(s)	697, 1201
Bme1390I	CCNGG	5 cut(s)	180, 181, 609, 807, 1614
Bme18I	GGWCC	3 cut(s)	302, 1178, 1516
BmeT110I	CYCGRG	1 cut(s)	179
BmgBI	CACGTC	1 cut(s)	1020
BmgT120I	GGNCC	6 cut(s)	302, 431, 569, 611, 1178, 1516
BmiI	GGNNCC	6 cut(s)	433, 901, 1132, 1179, 1189, 1518
BmrFI	CCNGG	5 cut(s)	180, 181, 609, 807, 1614
BmrI	ACTGGG	2 cut(s)	297, 998
BmsI	GCATC	3 cut(s)	57, 574, 748
BmtI	GCTAGC	1 cut(s)	77
BmuI	ACTGGG	2 cut(s)	297, 998
BpmI	CTGGAG	1 cut(s)	1350
Bpu10I	CCTNAGC	1 cut(s)	69
BpuEI	CTTGAG	1 cut(s)	1661
BpuMI	CCSGG	3 cut(s)	180, 181, 807
BsaI	GGTCTC	2 cut(s)	65, 189
BsaJI	CCNNGG	5 cut(s)	179, 607, 608, 805, 1560
BsaWI	WCCGGW	1 cut(s)	560
BsaXI	ACNNNNNCTCC	6 cut(s)	969, 984, 999, 1014, 1394, 1424
Bsc4I	CCNNNNNNNGG	8 cut(s)	186, 261, 455, 567, 745, 1513, 1577, 1581
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	7 cut(s)	292, 340, 895, 1004, 1069, 1333, 1422
Bse3DI	GCAATG	5 cut(s)	326, 723, 798, 1366, 1630
BseBI	CCWGG	2 cut(s)	609, 1614
BseDI	CCNNGG	5 cut(s)	179, 607, 608, 805, 1560
BseGI	GGATG	4 cut(s)	255, 1444, 1586, 1674
BseLI	CCNNNNNNNGG	8 cut(s)	186, 261, 455, 567, 745, 1513, 1577, 1581
BseMI	GCAATG	5 cut(s)	326, 723, 798, 1366, 1630
BseMII	CTCAG	1 cut(s)	83
BseNI	ACTGG	7 cut(s)	292, 340, 895, 1004, 1069, 1333, 1422
BseRI	GAGGAG	1 cut(s)	206
BseSI	GKGCMC	1 cut(s)	1572
BseXI	GCAGC	2 cut(s)	707, 1186
BseYI	CCCAGC	3 cut(s)	842, 1075, 1656
BshFI	GGCC	7 cut(s)	372, 432, 551, 571, 613, 880, 1266
BshNI	GGYRCC	1 cut(s)	899
BshTI	ACCGGT	1 cut(s)	560
BsiHKAI	GWGCWC	2 cut(s)	714, 1336
BsiHKCI	CYCGRG	1 cut(s)	179
BsiSI	CCGG	4 cut(s)	180, 561, 807, 1575
BslFI	GGGAC	1 cut(s)	1191
BslI	CCNNNNNNNGG	8 cut(s)	186, 261, 455, 567, 745, 1513, 1577, 1581
BsmAI	GTCTC	2 cut(s)	65, 189
BsmFI	GGGAC	1 cut(s)	1191
BsmI	GAATGC	2 cut(s)	526, 927
BsnI	GGCC	7 cut(s)	372, 432, 551, 571, 613, 880, 1266
Bso31I	GGTCTC	2 cut(s)	65, 189
BsoBI	CYCGRG	1 cut(s)	179
Bsp1286I	GDGCHC	3 cut(s)	714, 1336, 1572
Bsp1407I	TGTACA	1 cut(s)	351
Bsp143I	GATC	5 cut(s)	208, 416, 1536, 1644, 1729
BspACI	CCGC	2 cut(s)	1578, 1724
BspANI	GGCC	7 cut(s)	372, 432, 551, 571, 613, 880, 1266
BspCNI	CTCAG	1 cut(s)	82
BspHI	TCATGA	1 cut(s)	867
BspLI	GGNNCC	6 cut(s)	433, 901, 1132, 1179, 1189, 1518
BspOI	GCTAGC	1 cut(s)	77
BspPI	GGATC	1 cut(s)	1639
BspQI	GCTCTTC	2 cut(s)	143, 719
BspT107I	GGYRCC	1 cut(s)	899
BspTNI	GGTCTC	2 cut(s)	65, 189
BsrDI	GCAATG	5 cut(s)	326, 723, 798, 1366, 1630
BsrFI	RCCGGY	1 cut(s)	560
BsrGI	TGTACA	1 cut(s)	351
BsrI	ACTGG	7 cut(s)	292, 340, 895, 1004, 1069, 1333, 1422
BssAI	RCCGGY	1 cut(s)	560
BssECI	CCNNGG	5 cut(s)	179, 607, 608, 805, 1560
BssMI	GATC	5 cut(s)	208, 416, 1536, 1644, 1729
Bst2UI	CCWGG	2 cut(s)	609, 1614
Bst4CI	ACNGT	5 cut(s)	135, 170, 344, 919, 1561
Bst6I	CTCTTC	3 cut(s)	143, 719, 1455
BstAPI	GCANNNNNTGC	1 cut(s)	553
BstAUI	TGTACA	1 cut(s)	351
BstC8I	GCNNGC	6 cut(s)	75, 85, 396, 549, 925, 1148
BstDEI	CTNAG	3 cut(s)	69, 413, 1521
BstDSI	CCRYGG	1 cut(s)	1560
BstF5I	GGATG	4 cut(s)	255, 1444, 1586, 1674
BstHHI	GCGC	1 cut(s)	684
BstKTI	GATC	5 cut(s)	211, 419, 1539, 1647, 1732
BstMAI	GTCTC	2 cut(s)	65, 189
BstMBI	GATC	5 cut(s)	208, 416, 1536, 1644, 1729
BstMWI	GCNNNNNNNGC	2 cut(s)	378, 553
BstNI	CCWGG	2 cut(s)	609, 1614
BstNSI	RCATGY	2 cut(s)	398, 679
BstSCI	CCNGG	5 cut(s)	178, 179, 607, 805, 1612
BstSLI	GKGCMC	1 cut(s)	1572
BstV1I	GCAGC	2 cut(s)	707, 1186
BstX2I	RGATCY	1 cut(s)	1644
BstXI	CCANNNNNNTGG	4 cut(s)	266, 1262, 1274, 1620
BstYI	RGATCY	1 cut(s)	1644
BsuI	GTATCC	1 cut(s)	1411
BsuRI	GGCC	7 cut(s)	372, 432, 551, 571, 613, 880, 1266
BtgI	CCRYGG	1 cut(s)	1560
BtrI	CACGTC	1 cut(s)	1020
BtsCI	GGATG	4 cut(s)	255, 1444, 1586, 1674
BtsI	GCAGTG	1 cut(s)	1236
BtsIMutI	CAGTG	5 cut(s)	528, 698, 915, 1236, 1326
Cac8I	GCNNGC	6 cut(s)	75, 85, 396, 549, 925, 1148
CaiI	CAGNNNCTG	1 cut(s)	530
CciI	TCATGA	1 cut(s)	867
CfoI	GCGC	1 cut(s)	684
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	6 cut(s)	302, 431, 569, 611, 1178, 1516
Cfr9I	CCCGGG	1 cut(s)	179
Csp6I	GTAC	1 cut(s)	352
CspAI	ACCGGT	1 cut(s)	560
CspCI	CAANNNNNGTGG	2 cut(s)	272, 307
CviAII	CATG	9 cut(s)	236, 266, 395, 408, 676, 868, 1140, 1192, 1460
CviQI	GTAC	1 cut(s)	352
DdeI	CTNAG	3 cut(s)	69, 413, 1521
DpnI	GATC	5 cut(s)	210, 418, 1538, 1646, 1731
DpnII	GATC	5 cut(s)	208, 416, 1536, 1644, 1729
EaeI	YGGCCR	1 cut(s)	1264
Eam1104I	CTCTTC	3 cut(s)	143, 719, 1455
EarI	CTCTTC	3 cut(s)	143, 719, 1455
EciI	GGCGGA	1 cut(s)	1593
Ecl136II	GAGCTC	1 cut(s)	712
Eco147I	AGGCCT	1 cut(s)	551
Eco24I	GRGCYC	1 cut(s)	714
Eco31I	GGTCTC	2 cut(s)	65, 189
Eco47I	GGWCC	3 cut(s)	302, 1178, 1516
Eco53kI	GAGCTC	1 cut(s)	712
Eco57I	CTGAAG	3 cut(s)	552, 671, 703
Eco88I	CYCGRG	1 cut(s)	179
EcoICRI	GAGCTC	1 cut(s)	712
EcoO109I	RGGNCCY	3 cut(s)	611, 1178, 1516
EcoRII	CCWGG	2 cut(s)	607, 1612
EcoT22I	ATGCAT	1 cut(s)	1632
EcoT38I	GRGCYC	1 cut(s)	714
FaeI	CATG	9 cut(s)	239, 269, 398, 411, 679, 871, 1143, 1195, 1463
FalI	AAGNNNNNCTT	2 cut(s)	536, 568
FaqI	GGGAC	1 cut(s)	1191
FatI	CATG	9 cut(s)	235, 265, 394, 407, 675, 867, 1139, 1191, 1459
FauI	CCCGC	1 cut(s)	1731
Fnu4HI	GCNGC	2 cut(s)	696, 1200
FokI	GGATG	4 cut(s)	242, 1431, 1593, 1681
FriOI	GRGCYC	1 cut(s)	714
Fsp4HI	GCNGC	2 cut(s)	696, 1200
FspBI	CTAG	7 cut(s)	74, 198, 896, 932, 1395, 1601, 1653
FspI	TGCGCA	1 cut(s)	683
GlaI	GCGC	1 cut(s)	683
GluI	GCNGC	2 cut(s)	696, 1200
GsaI	CCCAGC	3 cut(s)	846, 1079, 1660
GsuI	CTGGAG	1 cut(s)	1350
HaeIII	GGCC	7 cut(s)	372, 432, 551, 571, 613, 880, 1266
HapII	CCGG	4 cut(s)	180, 561, 807, 1575
HhaI	GCGC	1 cut(s)	684
Hin1II	CATG	9 cut(s)	239, 269, 398, 411, 679, 871, 1143, 1195, 1463
Hin6I	GCGC	1 cut(s)	682
HinP1I	GCGC	1 cut(s)	682
HincII	GTYRAC	2 cut(s)	232, 1099
HindII	GTYRAC	2 cut(s)	232, 1099
HindIII	AAGCTT	1 cut(s)	1694
HinfI	GANTC	3 cut(s)	271, 603, 941
HpaII	CCGG	4 cut(s)	180, 561, 807, 1575
HphI	GGTGA	3 cut(s)	218, 352, 1058
Hpy166II	GTNNAC	4 cut(s)	232, 352, 766, 1099
Hpy188I	TCNGA	3 cut(s)	189, 583, 1536
Hpy188III	TCNNGA	2 cut(s)	868, 932
Hpy8I	GTNNAC	4 cut(s)	232, 352, 766, 1099
Hpy99I	CGWCG	2 cut(s)	710, 1024
HpyAV	CCTTC	2 cut(s)	646, 974
HpyCH4III	ACNGT	5 cut(s)	135, 170, 344, 919, 1561
HpyCH4IV	ACGT	3 cut(s)	454, 768, 1019
HpyF10VI	GCNNNNNNNGC	2 cut(s)	378, 553
HpyF3I	CTNAG	3 cut(s)	69, 413, 1521
HpySE526I	ACGT	3 cut(s)	454, 768, 1019
Hsp92II	CATG	9 cut(s)	239, 269, 398, 411, 679, 871, 1143, 1195, 1463
HspAI	GCGC	1 cut(s)	682
Kzo9I	GATC	5 cut(s)	208, 416, 1536, 1644, 1729
LguI	GCTCTTC	2 cut(s)	143, 719
LmnI	GCTCC	1 cut(s)	1331
Lsp1109I	GCAGC	2 cut(s)	707, 1186
LweI	GCATC	3 cut(s)	57, 574, 748
MaeI	CTAG	7 cut(s)	74, 198, 896, 932, 1395, 1601, 1653
MaeII	ACGT	3 cut(s)	454, 768, 1019
MaeIII	GTNAC	2 cut(s)	157, 886
MalI	GATC	5 cut(s)	210, 418, 1538, 1646, 1731
MboI	GATC	5 cut(s)	208, 416, 1536, 1644, 1729
MflI	RGATCY	1 cut(s)	1644
MhlI	GDGCHC	3 cut(s)	714, 1336, 1572
MlsI	TGGCCA	1 cut(s)	1266
MluCI	AATT	6 cut(s)	173, 355, 996, 1034, 1321, 1468
MluNI	TGGCCA	1 cut(s)	1266
MlyI	GAGTC	2 cut(s)	597, 950
MmeI	TCCRAC	1 cut(s)	1065
Mox20I	TGGCCA	1 cut(s)	1266
Mph1103I	ATGCAT	1 cut(s)	1632
MscI	TGGCCA	1 cut(s)	1266
MseI	TTAA	4 cut(s)	1320, 1373, 1389, 1467
MslI	CAYNNNNRTG	4 cut(s)	136, 264, 1397, 1458
Msp20I	TGGCCA	1 cut(s)	1266
MspA1I	CMGCKG	1 cut(s)	1339
MspI	CCGG	4 cut(s)	180, 561, 807, 1575
MspR9I	CCNGG	5 cut(s)	180, 181, 609, 807, 1614
Mva1269I	GAATGC	2 cut(s)	526, 927
MvaI	CCWGG	2 cut(s)	609, 1614
MwoI	GCNNNNNNNGC	2 cut(s)	378, 553
NciI	CCSGG	3 cut(s)	180, 181, 807
NdeII	GATC	5 cut(s)	208, 416, 1536, 1644, 1729
NheI	GCTAGC	1 cut(s)	73
NlaIII	CATG	9 cut(s)	239, 269, 398, 411, 679, 871, 1143, 1195, 1463
NlaIV	GGNNCC	6 cut(s)	433, 901, 1132, 1179, 1189, 1518
NmuCI	GTSAC	1 cut(s)	886
NsbI	TGCGCA	1 cut(s)	683
NsiI	ATGCAT	1 cut(s)	1632
NspI	RCATGY	2 cut(s)	398, 679
OliI	CACNNNNGTG	2 cut(s)	136, 1397
PaeI	GCATGC	1 cut(s)	398
PagI	TCATGA	1 cut(s)	867
PasI	CCCWGGG	1 cut(s)	608
PceI	AGGCCT	1 cut(s)	551
PciI	ACATGT	1 cut(s)	675
PciSI	GCTCTTC	2 cut(s)	143, 719
PctI	GAATGC	2 cut(s)	526, 927
PfeI	GAWTC	1 cut(s)	271
PflMI	CCANNNNNTGG	1 cut(s)	261
PinAI	ACCGGT	1 cut(s)	560
PkrI	GCNGC	2 cut(s)	697, 1201
PleI	GAGTC	2 cut(s)	597, 949
PpsI	GAGTC	2 cut(s)	597, 949
PpuMI	RGGWCCY	2 cut(s)	1178, 1516
PscI	ACATGT	1 cut(s)	675
Psp124BI	GAGCTC	1 cut(s)	714
Psp5II	RGGWCCY	2 cut(s)	1178, 1516
Psp6I	CCWGG	2 cut(s)	607, 1612
PspFI	CCCAGC	3 cut(s)	842, 1075, 1656
PspGI	CCWGG	2 cut(s)	607, 1612
PspN4I	GGNNCC	6 cut(s)	433, 901, 1132, 1179, 1189, 1518
PspPI	GGNCC	6 cut(s)	302, 431, 569, 611, 1178, 1516
PspPPI	RGGWCCY	2 cut(s)	1178, 1516
PstNI	CAGNNNCTG	1 cut(s)	530
PsuI	RGATCY	1 cut(s)	1644
PvuII	CAGCTG	1 cut(s)	1339
RsaI	GTAC	1 cut(s)	353
RsaNI	GTAC	1 cut(s)	352
RseI	CAYNNNNRTG	4 cut(s)	136, 264, 1397, 1458
SacI	GAGCTC	1 cut(s)	714
SapI	GCTCTTC	2 cut(s)	143, 719
SaqAI	TTAA	4 cut(s)	1320, 1373, 1389, 1467
SatI	GCNGC	2 cut(s)	696, 1200
Sau3AI	GATC	5 cut(s)	208, 416, 1536, 1644, 1729
Sau96I	GGNCC	6 cut(s)	302, 431, 569, 611, 1178, 1516
SchI	GAGTC	2 cut(s)	597, 950
ScrFI	CCNGG	5 cut(s)	180, 181, 609, 807, 1614
SduI	GDGCHC	3 cut(s)	714, 1336, 1572
SfaNI	GCATC	3 cut(s)	57, 574, 748
SinI	GGWCC	3 cut(s)	302, 1178, 1516
SmaI	CCCGGG	1 cut(s)	181
SmiMI	CAYNNNNRTG	4 cut(s)	136, 264, 1397, 1458
SmlI	CTYRAG	1 cut(s)	1640
SmoI	CTYRAG	1 cut(s)	1640
SpeI	ACTAGT	1 cut(s)	1394
SphI	GCATGC	1 cut(s)	398
Sse9I	AATT	6 cut(s)	173, 355, 996, 1034, 1321, 1468
SseBI	AGGCCT	1 cut(s)	551
SsiI	CCGC	2 cut(s)	1578, 1724
SspMI	CTAG	7 cut(s)	74, 198, 896, 932, 1395, 1601, 1653
SstI	GAGCTC	1 cut(s)	714
StuI	AGGCCT	1 cut(s)	551
StyD4I	CCNGG	5 cut(s)	178, 179, 607, 805, 1612
TaaI	ACNGT	5 cut(s)	135, 170, 344, 919, 1561
TaiI	ACGT	3 cut(s)	457, 771, 1022
TaqI	TCGA	3 cut(s)	274, 1503, 1539
TasI	AATT	6 cut(s)	173, 355, 996, 1034, 1321, 1468
TatI	WGTACW	1 cut(s)	351
TfiI	GAWTC	1 cut(s)	271
Tru1I	TTAA	4 cut(s)	1320, 1373, 1389, 1467
Tru9I	TTAA	4 cut(s)	1320, 1373, 1389, 1467
TscAI	CASTG	5 cut(s)	535, 705, 922, 1243, 1333
TseFI	GTSAC	1 cut(s)	886
TseI	GCWGC	2 cut(s)	695, 1199
Tsp45I	GTSAC	1 cut(s)	886
TspDTI	ATGAA	6 cut(s)	396, 856, 944, 986, 1442, 1448
TspGWI	ACGGA	2 cut(s)	1040, 1704
TspMI	CCCGGG	1 cut(s)	179
TspRI	CASTG	5 cut(s)	535, 705, 922, 1243, 1333
Van91I	CCANNNNNTGG	1 cut(s)	261
VpaK11BI	GGWCC	3 cut(s)	302, 1178, 1516
XapI	RAATTY	1 cut(s)	1034
XbaI	TCTAGA	1 cut(s)	931
XceI	RCATGY	2 cut(s)	398, 679
XmaI	CCCGGG	1 cut(s)	179
XspI	CTAG	7 cut(s)	74, 198, 896, 932, 1395, 1601, 1653
Zsp2I	ATGCAT	1 cut(s)	1632

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.