Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000610

Physical Location & Seq

Genomic Coordinates Forward (+)

22971388 .. 22976143

Gene Structure 4756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00018850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGACCGATCTCAACGGAGATAGCGTTGTGCCGTCGTCCACTCTAGACGTGGTATCTTTCGGGGAGATTGGCCTGGAAATATGCAAGTCAAAATCATCATCTCCATTGGAGTTCAAAGGGTACATGGAGACGTGGAAATACTTGGCAGAGGTTGGACTTGAAAGGAAAGGCCGGGAGGTACAACTGCAAAATGTGACAAGGCTGTGCCATACGAAAAGCATTGTAACCATAAACGGTCAATTTCCTGGGCCTCGAATTGTTGCTAGGGAGGGTGATCGCCTCCTCATTAAAGTTGTTAACCATGTCCGAAGCAACATTTCCATCCATTGGCATGGAATTCGACAGCTTCGAACTGGGTGGGCTGATGGTCCAGCATACATTACCCAATGCCCAATACAAACCGGCAACAGCTATGTGTACAACTTCACCATTGTAGGCCAGAGGGGCACTCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACCATCTATGGCCCCCTGATCATTCTTCCGAAGCGTGGTGTTCCTTATCCATTCACCAAACCCTATAAGGAAGTTCCCATCATCTTTGGAGAATGGTGGAATGCAGATCCTGAAGCAGTCATAAACCAGGCCTTGCAAACTGGGGGAGGACCAAATGTTTCTGATGCTTACACCATCAATGGACTCCCAGGGCCATTGTATAACTGCTCTGCCAAAGATACTTTCAAGCTAAAGGTTCAAACTGGGAAGACATACCTTCTGCGCCTAATCAATGCAGCGCTGAACGACGAGCTCTTCTTCAGCATTGCAAACCACACCCTCAAAGTGGTGGAAACTGATGCAATTTATGTCAAACCCTTCGAGACCAACACCATTCTCATTGCCCCGGGACAAACCACAAATGTTCTTCTCAAAACAAAACCTAACTACCCAAACGCCACATTTTTCATGACTGCAAGGCCATACGTGACTGGTCTAGGCACCTTTGATAACTCCACTCTTGCTGGAATTTTAGAATACGAAACGACTACACTTCATTCTACCCTCCCAATGAACAAACTTCCACTCCACAAACCAATTCTCCCAGTTCTAAATGACACATCATTTGCAACAAAATTCGCCAACAAACTCCGTAGCTTGAACACTCCCCAGTTCCCTGCTGATGTTCCGCAGAAAGTTGACAAGCATTTGTTCTTCACCATAGGGCTTGGAACCAACCCATGTAGCCAGCAGCAACACAACAACCAGACCTGCCAGGGACCGAATGGAACCATGTTTGCTGCTTCAATCAACAACATTTCTTTCACTATGCCAAACACTGCCCTACTCCAATCCCACTTCTTTGGCCAATCCAATGGGGTTTATTCCCCTAATTTTCCAATCAGTCCTTTAATTCCATTTAATTACACTGGAGCCCAGCTGAACAATACTAATGTGGGCAATGGTACTAAGCTAATGGTGCTTCCCTTTAACACTAGTGTGGAGTTGGTGTTGCAGGACACCAGTATTCTTGGTGCTGAAAGTCATCCTCTTCATCTTCATGGCTTTAATTTCTTTGTTGTTGGTCAAGGTTTTGGCAACTTCGACCAAAATGAGGACCCTAGGAAGTTCAATCTGATCGACCCTGTTGAGAGAAACACTGTGGGTGTGCCCTCCGGCGGGTGGGTTGCTATTCGGTTTCTAGCAGATAACCCGGGTGTATGGTTCATGCATTGCCACCTTGAGATCCATACTAGCTGGGGCTTGAAGATGGCTTGGGTAGTCTTAGATGGAAAGCTTCCCAATCAAAAGTTGCTTCCTCCGCCACCGGATCTGCCCAAATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

603

Amino Acids

66.93

Weight (kDa)

8.71

Isoelectric Point (pI)

30.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	60 - 173	1.4e-42	Multicopper oxidase
Cu-oxidase	PF00394	186 - 336	6.8e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	461 - 585	4.6e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60020 AT5G60020 AT5G60020
fragaria_vesca	FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica	MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica	Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis	pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis	RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata	RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora	Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii	Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa	Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha	Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana	Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1244
AccB1I	GGYRCC	1 cut(s)	965
AccB7I	CCANNNNNTGG	1 cut(s)	327
AciI	CCGC	3 cut(s)	1154, 1644, 1787
AclWI	GGATC	3 cut(s)	587, 1705, 1803
AcoI	YGGCCR	1 cut(s)	1330
AcsI	RAATTY	3 cut(s)	336, 993, 1100
AcuI	CTGAAG	2 cut(s)	618, 769
AfaI	GTAC	4 cut(s)	122, 180, 419, 1432
AfeI	AGCGCT	1 cut(s)	765
AfiI	CCNNNNNNNGG	7 cut(s)	327, 521, 811, 1579, 1643, 1644, 1647
AgsI	TTSAA	8 cut(s)	115, 161, 712, 725, 1126, 1272, 1597, 1732
AhlI	ACTAGT	1 cut(s)	1460
AjiI	CACGTC	2 cut(s)	49, 132
AjnI	CCWGG	5 cut(s)	72, 244, 612, 673, 1239
AjuI	GAANNNNNNNTTGG	2 cut(s)	692, 724
AleI	CACNNNNGTG	1 cut(s)	1463
AluBI	AGCT	9 cut(s)	346, 411, 715, 778, 1122, 1405, 1438, 1722, 1762
AluI	AGCT	9 cut(s)	346, 411, 715, 778, 1122, 1405, 1438, 1722, 1762
Alw21I	GWGCWC	1 cut(s)	780
Alw26I	GTCTC	2 cut(s)	122, 842
AlwI	GGATC	3 cut(s)	587, 1705, 1803
AlwNI	CAGNNNCTG	1 cut(s)	596
Ama87I	CYCGRG	2 cut(s)	871, 1678
Aor51HI	AGCGCT	1 cut(s)	765
AoxI	GGCC	9 cut(s)	70, 169, 248, 436, 496, 615, 677, 944, 1330
ApeKI	GCWGC	3 cut(s)	761, 1216, 1265
ApoI	RAATTY	3 cut(s)	336, 993, 1100
ArsI	GACNNNNNNTTYG	2 cut(s)	1073, 1105
AspA2I	CCTAGG	1 cut(s)	1586
AspLEI	GCGC	2 cut(s)	750, 766
AspS9I	GGNCC	7 cut(s)	248, 368, 497, 635, 677, 1244, 1582
AsuC2I	CCSGG	5 cut(s)	173, 872, 873, 1679, 1680
AsuHPI	GGTGA	4 cut(s)	284, 418, 532, 1174
AsuII	TTCGAA	1 cut(s)	349
AvaI	CYCGRG	2 cut(s)	871, 1678
AvaII	GGWCC	4 cut(s)	368, 635, 1244, 1582
AvrII	CCTAGG	1 cut(s)	1586
BaeGI	GKGCMC	2 cut(s)	449, 1638
BalI	TGGCCA	1 cut(s)	1332
BanI	GGYRCC	1 cut(s)	965
BanII	GRGCYC	2 cut(s)	780, 1402
BbsI	GAAGAC	1 cut(s)	740
Bbv12I	GWGCWC	1 cut(s)	780
BbvI	GCAGC	3 cut(s)	773, 1228, 1252
BccI	CCATC	7 cut(s)	329, 359, 497, 572, 668, 1729, 1748
BceAI	ACGGC	1 cut(s)	16
BcgI	CGANNNNNNTGC	2 cut(s)	320, 354
BciT130I	CCWGG	5 cut(s)	74, 246, 614, 675, 1241
BclI	TGATCA	1 cut(s)	504
BcnI	CCSGG	5 cut(s)	173, 872, 873, 1679, 1680
BcoDI	GTCTC	2 cut(s)	122, 842
BcuI	ACTAGT	1 cut(s)	1460
BfaI	CTAG	7 cut(s)	44, 264, 962, 1461, 1587, 1667, 1719
BfoI	RGCGCY	1 cut(s)	767
BfuAI	ACCTGC	1 cut(s)	1244
BglI	GCCNNNNNGGC	1 cut(s)	444
BisI	GCNGC	3 cut(s)	762, 1217, 1266
BlnI	CCTAGG	1 cut(s)	1586
BlsI	GCNGC	3 cut(s)	763, 1218, 1267
Bme18I	GGWCC	4 cut(s)	368, 635, 1244, 1582
BmeT110I	CYCGRG	2 cut(s)	871, 1678
BmgBI	CACGTC	2 cut(s)	49, 132
BmgT120I	GGNCC	7 cut(s)	248, 368, 497, 635, 677, 1244, 1582
BmiI	GGNNCC	7 cut(s)	499, 967, 1198, 1245, 1255, 1399, 1584
BmrI	ACTGGG	5 cut(s)	363, 636, 738, 1064, 1129
BmsI	GCATC	2 cut(s)	640, 814
BmuI	ACTGGG	5 cut(s)	363, 636, 738, 1064, 1129
BpiI	GAAGAC	1 cut(s)	740
BplI	GAGNNNNNCTC	2 cut(s)	433, 465
BpmI	CTGGAG	1 cut(s)	1416
Bpu14I	TTCGAA	1 cut(s)	349
BpuEI	CTTGAG	1 cut(s)	1727
BpuMI	CCSGG	5 cut(s)	173, 872, 873, 1679, 1680
BsaAI	YACGTR	1 cut(s)	952
BsaI	GGTCTC	1 cut(s)	842
BsaJI	CCNNGG	8 cut(s)	245, 673, 674, 870, 871, 1240, 1586, 1678
BsaWI	WCCGGW	1 cut(s)	1792
BsaXI	ACNNNNNCTCC	8 cut(s)	9, 39, 1035, 1050, 1065, 1080, 1460, 1490
Bsc4I	CCNNNNNNNGG	7 cut(s)	327, 521, 811, 1579, 1643, 1644, 1647
Bse118I	RCCGGY	1 cut(s)	401
Bse1I	ACTGG	8 cut(s)	358, 631, 733, 961, 1070, 1135, 1399, 1488
Bse3DI	GCAATG	4 cut(s)	789, 864, 1432, 1696
BseBI	CCWGG	5 cut(s)	74, 246, 614, 675, 1241
BseDI	CCNNGG	8 cut(s)	245, 673, 674, 870, 871, 1240, 1586, 1678
BseGI	GGATG	2 cut(s)	321, 1510
BseLI	CCNNNNNNNGG	7 cut(s)	327, 521, 811, 1579, 1643, 1644, 1647
BseMI	GCAATG	4 cut(s)	789, 864, 1432, 1696
BseNI	ACTGG	8 cut(s)	358, 631, 733, 961, 1070, 1135, 1399, 1488
BseRI	GAGGAG	1 cut(s)	272
BseSI	GKGCMC	2 cut(s)	449, 1638
BseXI	GCAGC	3 cut(s)	773, 1228, 1252
BseYI	CCCAGC	2 cut(s)	1401, 1722
BshFI	GGCC	9 cut(s)	72, 171, 250, 438, 498, 617, 679, 946, 1332
BshNI	GGYRCC	1 cut(s)	965
BsiHKAI	GWGCWC	1 cut(s)	780
BsiHKCI	CYCGRG	2 cut(s)	871, 1678
BsiSI	CCGG	6 cut(s)	172, 402, 872, 1641, 1679, 1793
BslFI	GGGAC	2 cut(s)	888, 1257
BslI	CCNNNNNNNGG	7 cut(s)	327, 521, 811, 1579, 1643, 1644, 1647
BsmAI	GTCTC	2 cut(s)	122, 842
BsmBI	CGTCTC	1 cut(s)	122
BsmFI	GGGAC	2 cut(s)	888, 1257
BsmI	GAATGC	1 cut(s)	592
BsnI	GGCC	9 cut(s)	72, 171, 250, 438, 498, 617, 679, 946, 1332
Bso31I	GGTCTC	1 cut(s)	842
BsoBI	CYCGRG	2 cut(s)	871, 1678
Bsp119I	TTCGAA	1 cut(s)	349
Bsp1286I	GDGCHC	4 cut(s)	449, 780, 1402, 1638
Bsp1407I	TGTACA	1 cut(s)	417
Bsp143I	GATC	8 cut(s)	7, 274, 482, 504, 592, 1602, 1710, 1795
BspACI	CCGC	3 cut(s)	1154, 1644, 1787
BspANI	GGCC	9 cut(s)	72, 171, 250, 438, 498, 617, 679, 946, 1332
BspHI	TCATGA	1 cut(s)	933
BspLI	GGNNCC	7 cut(s)	499, 967, 1198, 1245, 1255, 1399, 1584
BspMI	ACCTGC	1 cut(s)	1244
BspPI	GGATC	3 cut(s)	587, 1705, 1803
BspQI	GCTCTTC	1 cut(s)	785
BspT104I	TTCGAA	1 cut(s)	349
BspT107I	GGYRCC	1 cut(s)	965
BspTNI	GGTCTC	1 cut(s)	842
BsrDI	GCAATG	4 cut(s)	789, 864, 1432, 1696
BsrFI	RCCGGY	1 cut(s)	401
BsrGI	TGTACA	1 cut(s)	417
BsrI	ACTGG	8 cut(s)	358, 631, 733, 961, 1070, 1135, 1399, 1488
BssAI	RCCGGY	1 cut(s)	401
BssECI	CCNNGG	8 cut(s)	245, 673, 674, 870, 871, 1240, 1586, 1678
BssMI	GATC	8 cut(s)	7, 274, 482, 504, 592, 1602, 1710, 1795
BssT1I	CCWWGG	1 cut(s)	1586
Bst2UI	CCWGG	5 cut(s)	74, 246, 614, 675, 1241
Bst4CI	ACNGT	2 cut(s)	236, 1627
Bst6I	CTCTTC	2 cut(s)	785, 1521
BstAUI	TGTACA	1 cut(s)	417
BstBAI	YACGTR	1 cut(s)	952
BstBI	TTCGAA	1 cut(s)	349
BstC8I	GCNNGC	2 cut(s)	462, 1214
BstDEI	CTNAG	3 cut(s)	479, 1434, 1750
BstF5I	GGATG	2 cut(s)	321, 1510
BstH2I	RGCGCY	1 cut(s)	767
BstHHI	GCGC	2 cut(s)	750, 766
BstKTI	GATC	8 cut(s)	10, 277, 485, 507, 595, 1605, 1713, 1798
BstMAI	GTCTC	2 cut(s)	122, 842
BstMBI	GATC	8 cut(s)	7, 274, 482, 504, 592, 1602, 1710, 1795
BstMWI	GCNNNNNNNGC	3 cut(s)	444, 1444, 1786
BstNI	CCWGG	5 cut(s)	74, 246, 614, 675, 1241
BstNSI	RCATGY	1 cut(s)	464
BstSLI	GKGCMC	2 cut(s)	449, 1638
BstV1I	GCAGC	3 cut(s)	773, 1228, 1252
BstV2I	GAAGAC	1 cut(s)	740
BstX2I	RGATCY	3 cut(s)	592, 1710, 1795
BstXI	CCANNNNNNTGG	3 cut(s)	332, 1328, 1340
BstYI	RGATCY	3 cut(s)	592, 1710, 1795
BsuRI	GGCC	9 cut(s)	72, 171, 250, 438, 498, 617, 679, 946, 1332
BtrI	CACGTC	2 cut(s)	49, 132
BtsCI	GGATG	2 cut(s)	321, 1510
BtsI	GCAGTG	1 cut(s)	1302
BtsIMutI	CAGTG	3 cut(s)	1302, 1392, 1623
BveI	ACCTGC	1 cut(s)	1244
Cac8I	GCNNGC	2 cut(s)	462, 1214
CaiI	CAGNNNCTG	1 cut(s)	596
CciI	TCATGA	1 cut(s)	933
CfoI	GCGC	2 cut(s)	750, 766
Cfr10I	RCCGGY	1 cut(s)	401
Cfr13I	GGNCC	7 cut(s)	248, 368, 497, 635, 677, 1244, 1582
Cfr9I	CCCGGG	2 cut(s)	871, 1678
Csp6I	GTAC	4 cut(s)	121, 179, 418, 1431
CviQI	GTAC	4 cut(s)	121, 179, 418, 1431
DdeI	CTNAG	3 cut(s)	479, 1434, 1750
DpnI	GATC	8 cut(s)	9, 276, 484, 506, 594, 1604, 1712, 1797
DpnII	GATC	8 cut(s)	7, 274, 482, 504, 592, 1602, 1710, 1795
EaeI	YGGCCR	1 cut(s)	1330
Eam1104I	CTCTTC	2 cut(s)	785, 1521
EarI	CTCTTC	2 cut(s)	785, 1521
EciI	GGCGGA	1 cut(s)	1776
Ecl136II	GAGCTC	1 cut(s)	778
Eco130I	CCWWGG	1 cut(s)	1586
Eco147I	AGGCCT	1 cut(s)	617
Eco24I	GRGCYC	2 cut(s)	780, 1402
Eco31I	GGTCTC	1 cut(s)	842
Eco47I	GGWCC	4 cut(s)	368, 635, 1244, 1582
Eco47III	AGCGCT	1 cut(s)	765
Eco53kI	GAGCTC	1 cut(s)	778
Eco57I	CTGAAG	2 cut(s)	618, 769
Eco88I	CYCGRG	2 cut(s)	871, 1678
EcoICRI	GAGCTC	1 cut(s)	778
EcoO109I	RGGNCCY	1 cut(s)	1582
EcoRI	GAATTC	1 cut(s)	336
EcoRII	CCWGG	5 cut(s)	72, 244, 612, 673, 1239
EcoT14I	CCWWGG	1 cut(s)	1586
EcoT22I	ATGCAT	1 cut(s)	1698
EcoT38I	GRGCYC	2 cut(s)	780, 1402
ErhI	CCWWGG	1 cut(s)	1586
Esp3I	CGTCTC	1 cut(s)	122
FaqI	GGGAC	2 cut(s)	888, 1257
FauI	CCCGC	1 cut(s)	1637
FbaI	TGATCA	1 cut(s)	504
Fnu4HI	GCNGC	3 cut(s)	762, 1217, 1266
FokI	GGATG	2 cut(s)	308, 1497
FriOI	GRGCYC	2 cut(s)	780, 1402
Fsp4HI	GCNGC	3 cut(s)	762, 1217, 1266
FspBI	CTAG	7 cut(s)	44, 264, 962, 1461, 1587, 1667, 1719
GlaI	GCGC	2 cut(s)	749, 765
GluI	GCNGC	3 cut(s)	762, 1217, 1266
GsaI	CCCAGC	2 cut(s)	1405, 1726
GsuI	CTGGAG	1 cut(s)	1416
HaeII	RGCGCY	1 cut(s)	767
HaeIII	GGCC	9 cut(s)	72, 171, 250, 438, 498, 617, 679, 946, 1332
HapII	CCGG	6 cut(s)	172, 402, 872, 1641, 1679, 1793
HhaI	GCGC	2 cut(s)	750, 766
Hin6I	GCGC	2 cut(s)	748, 764
HinP1I	GCGC	2 cut(s)	748, 764
HincII	GTYRAC	2 cut(s)	298, 1165
HindII	GTYRAC	2 cut(s)	298, 1165
HindIII	AAGCTT	1 cut(s)	1760
HinfI	GANTC	1 cut(s)	669
HpaI	GTTAAC	1 cut(s)	298
HpaII	CCGG	6 cut(s)	172, 402, 872, 1641, 1679, 1793
HphI	GGTGA	4 cut(s)	284, 418, 532, 1174
Hpy166II	GTNNAC	4 cut(s)	39, 298, 418, 1165
Hpy188I	TCNGA	4 cut(s)	308, 516, 649, 1602
Hpy188III	TCNNGA	4 cut(s)	44, 596, 847, 934
Hpy8I	GTNNAC	4 cut(s)	39, 298, 418, 1165
Hpy99I	CGWCG	2 cut(s)	37, 776
HpyAV	CCTTC	2 cut(s)	752, 853
HpyCH4III	ACNGT	2 cut(s)	236, 1627
HpyCH4IV	ACGT	3 cut(s)	48, 131, 951
HpyF10VI	GCNNNNNNNGC	3 cut(s)	444, 1444, 1786
HpyF3I	CTNAG	3 cut(s)	479, 1434, 1750
HpySE526I	ACGT	3 cut(s)	48, 131, 951
HspAI	GCGC	2 cut(s)	748, 764
Ksp22I	TGATCA	1 cut(s)	504
KspAI	GTTAAC	1 cut(s)	298
Kzo9I	GATC	8 cut(s)	7, 274, 482, 504, 592, 1602, 1710, 1795
LguI	GCTCTTC	1 cut(s)	785
LmnI	GCTCC	1 cut(s)	1397
Lsp1109I	GCAGC	3 cut(s)	773, 1228, 1252
LweI	GCATC	2 cut(s)	640, 814
MaeI	CTAG	7 cut(s)	44, 264, 962, 1461, 1587, 1667, 1719
MaeII	ACGT	3 cut(s)	48, 131, 951
MaeIII	GTNAC	3 cut(s)	193, 223, 952
MalI	GATC	8 cut(s)	9, 276, 484, 506, 594, 1604, 1712, 1797
MboI	GATC	8 cut(s)	7, 274, 482, 504, 592, 1602, 1710, 1795
MboII	GAAGA	9 cut(s)	503, 745, 772, 775, 884, 1171, 1508, 1514, 1744
MflI	RGATCY	3 cut(s)	592, 1710, 1795
MhlI	GDGCHC	4 cut(s)	449, 780, 1402, 1638
MlsI	TGGCCA	1 cut(s)	1332
MluNI	TGGCCA	1 cut(s)	1332
MlyI	GAGTC	1 cut(s)	663
MmeI	TCCRAC	1 cut(s)	133
Mox20I	TGGCCA	1 cut(s)	1332
Mph1103I	ATGCAT	1 cut(s)	1698
MscI	TGGCCA	1 cut(s)	1332
MseI	TTAA	6 cut(s)	288, 297, 1376, 1386, 1455, 1533
MslI	CAYNNNNRTG	3 cut(s)	330, 1463, 1524
Msp20I	TGGCCA	1 cut(s)	1332
MspA1I	CMGCKG	1 cut(s)	1405
MspI	CCGG	6 cut(s)	172, 402, 872, 1641, 1679, 1793
Mva1269I	GAATGC	1 cut(s)	592
MvaI	CCWGG	5 cut(s)	74, 246, 614, 675, 1241
MwoI	GCNNNNNNNGC	3 cut(s)	444, 1444, 1786
NciI	CCSGG	5 cut(s)	173, 872, 873, 1679, 1680
NdeII	GATC	8 cut(s)	7, 274, 482, 504, 592, 1602, 1710, 1795
NlaIV	GGNNCC	7 cut(s)	499, 967, 1198, 1245, 1255, 1399, 1584
NmuCI	GTSAC	2 cut(s)	193, 952
NsiI	ATGCAT	1 cut(s)	1698
NspI	RCATGY	1 cut(s)	464
NspV	TTCGAA	1 cut(s)	349
OliI	CACNNNNGTG	1 cut(s)	1463
PaeI	GCATGC	1 cut(s)	464
PagI	TCATGA	1 cut(s)	933
PasI	CCCWGGG	1 cut(s)	674
PceI	AGGCCT	1 cut(s)	617
PciSI	GCTCTTC	1 cut(s)	785
PcsI	WCGNNNNNNNCGW	2 cut(s)	21, 346
PctI	GAATGC	1 cut(s)	592
PflMI	CCANNNNNTGG	1 cut(s)	327
PkrI	GCNGC	3 cut(s)	763, 1218, 1267
PleI	GAGTC	1 cut(s)	663
PpsI	GAGTC	1 cut(s)	663
Ppu21I	YACGTR	1 cut(s)	952
PpuMI	RGGWCCY	1 cut(s)	1582
Psp124BI	GAGCTC	1 cut(s)	780
Psp5II	RGGWCCY	1 cut(s)	1582
Psp6I	CCWGG	5 cut(s)	72, 244, 612, 673, 1239
PspFI	CCCAGC	2 cut(s)	1401, 1722
PspGI	CCWGG	5 cut(s)	72, 244, 612, 673, 1239
PspN4I	GGNNCC	7 cut(s)	499, 967, 1198, 1245, 1255, 1399, 1584
PspPI	GGNCC	7 cut(s)	248, 368, 497, 635, 677, 1244, 1582
PspPPI	RGGWCCY	1 cut(s)	1582
PstNI	CAGNNNCTG	1 cut(s)	596
PsuI	RGATCY	3 cut(s)	592, 1710, 1795
PvuII	CAGCTG	1 cut(s)	1405
RsaI	GTAC	4 cut(s)	122, 180, 419, 1432
RsaNI	GTAC	4 cut(s)	121, 179, 418, 1431
RseI	CAYNNNNRTG	3 cut(s)	330, 1463, 1524
SacI	GAGCTC	1 cut(s)	780
SapI	GCTCTTC	1 cut(s)	785
SaqAI	TTAA	6 cut(s)	288, 297, 1376, 1386, 1455, 1533
SatI	GCNGC	3 cut(s)	762, 1217, 1266
Sau3AI	GATC	8 cut(s)	7, 274, 482, 504, 592, 1602, 1710, 1795
Sau96I	GGNCC	7 cut(s)	248, 368, 497, 635, 677, 1244, 1582
SchI	GAGTC	1 cut(s)	663
SduI	GDGCHC	4 cut(s)	449, 780, 1402, 1638
SfaNI	GCATC	2 cut(s)	640, 814
SfuI	TTCGAA	1 cut(s)	349
SinI	GGWCC	4 cut(s)	368, 635, 1244, 1582
SmaI	CCCGGG	2 cut(s)	873, 1680
SmiMI	CAYNNNNRTG	3 cut(s)	330, 1463, 1524
SmlI	CTYRAG	1 cut(s)	1706
SmoI	CTYRAG	1 cut(s)	1706
SpeI	ACTAGT	1 cut(s)	1460
SphI	GCATGC	1 cut(s)	464
SseBI	AGGCCT	1 cut(s)	617
SsiI	CCGC	3 cut(s)	1154, 1644, 1787
SspMI	CTAG	7 cut(s)	44, 264, 962, 1461, 1587, 1667, 1719
SstI	GAGCTC	1 cut(s)	780
StuI	AGGCCT	1 cut(s)	617
StyI	CCWWGG	1 cut(s)	1586
TaaI	ACNGT	2 cut(s)	236, 1627
TaiI	ACGT	3 cut(s)	51, 134, 954
TaqI	TCGA	6 cut(s)	253, 340, 349, 846, 1569, 1605
TaqII	GACCGA	2 cut(s)	20, 1261
TatI	WGTACW	1 cut(s)	417
Tru1I	TTAA	6 cut(s)	288, 297, 1376, 1386, 1455, 1533
Tru9I	TTAA	6 cut(s)	288, 297, 1376, 1386, 1455, 1533
TscAI	CASTG	3 cut(s)	1309, 1399, 1630
TseFI	GTSAC	2 cut(s)	193, 952
TseI	GCWGC	3 cut(s)	761, 1216, 1265
Tsp45I	GTSAC	2 cut(s)	193, 952
TspDTI	ATGAA	7 cut(s)	462, 922, 1010, 1052, 1508, 1514, 1681
TspGWI	ACGGA	2 cut(s)	30, 1106
TspMI	CCCGGG	2 cut(s)	871, 1678
TspRI	CASTG	3 cut(s)	1309, 1399, 1630
Van91I	CCANNNNNTGG	1 cut(s)	327
VpaK11BI	GGWCC	4 cut(s)	368, 635, 1244, 1582
XapI	RAATTY	3 cut(s)	336, 993, 1100
XbaI	TCTAGA	1 cut(s)	43
XceI	RCATGY	1 cut(s)	464
XcmI	CCANNNNNNNNNTGG	2 cut(s)	46, 1247
XmaI	CCCGGG	2 cut(s)	871, 1678
XmaJI	CCTAGG	1 cut(s)	1586
XspI	CTAG	7 cut(s)	44, 264, 962, 1461, 1587, 1667, 1719
Zsp2I	ATGCAT	1 cut(s)	1698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.