FvH4_6g13390

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000610
Physical Location & Seq
Forward (+)
8140343 .. 8143219
2877 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g13390.t1

Sequence Viewer

Length: 1776 bp
ATGGGTTCTAGTCATCCTGCATCACCAGCATTGTCAATGGCTACGGTTTTCTTTTCAGTTTGCGCGTTCTTTTGTGTACTGCCGGAGCTAGCAGTGGGAAAGCATGCAGGGGTTACCAGGCACTACAAGTTCAATATCATGTCTCAAAGTGTGACAAGACTTTGTAAAACGAAGAGCATTATAACTGTGAATGGGCAGTTTCCAGGGCCTAGAATCGTAGCAAGGGAAGGCGACAGGCTAGTGATCAAGGTGGTCAATCATGTTCAGAACAATGTCACACTTCACTGGCATGGAATTAGGCAATTAAGGAGTGGATGGGCAGATGGACCTTCATATATAACTCAATGCCCAATTCAGACAGGGCAGAGTTATGTGTATAACTTCACCATCACTGGCCAGAGAGGCACATTGTGGTGGCATGCCCACATCTCTTGGCTTAGGGCAACCCTCTATGGACCTATTGTCATTCTCCCTAAAAAACATGTGCCTTACCCATTCCCCCAACCCTTCAAAGAAGTCCCCATCATATTCGGAGAATGGTGGAAAGCAGACACAGAAACAGTGATCAACCAAGCCATACAAACAGGGTCAGGACCAAATGTCTCTGATGCCTACACTATTAATGGTCTTCCAGGGCCTTTGTATAACTGCTCAGCCAAAGATACATACAAGCTCAAGGTGAAGCCGGGGAAGACCTATCTGCTTCGTTTGATCAACGCCGCACTAAACAATGAGCTGTTCTTCAGCATTGCTAATCACACTTTCACTGTGGTTGAAGCCGATGCAGTGTATGTGAAGCCTTTTAGTACCAAAGTTGTTCTCATCACACCAGGACAGACCACCAATGTCATTTTGAGGACCAAACCCAAGTCCCCAAATGCCACATTTGTCATGGCAGCTAGGCCTTATGTCTCCGGCCCAGCTGCCTTTGACAACACTACCACCTCAGGTCTACTCGAATATGAAACTTCTGTCTCAAGCAACCACAACAAAAACAAGAACAAGAGGAAGAAGAAGCTGCTTCTTCTCACACCAGTGCTTCCAAAGCTCAATGACACAATGTTTTCAATGAACTACAACAAGAAAATCCGCAGCTTGGCCAATCCCAAATTCCCATCTGCAAATGTCCCGAAAACCGTGGACAAAAACTTCTTCTTCACAGTTGGTCTGGGACTAAGTCCATGCTCAAAGAACCAAAACTGCCCAGGCCCAAACAACACCAGGGTCGCGGCGGCAATCAACAATGTGTCATTTGTGCAACCTAGTACTGCCCTTCTTCAAGCACACTTCTTCAACAAAACGAAGGGTGTGTACACCACAGATTTCCCAGCCAACCCATTAGTCAAATTCAACTACACAGGTACTCCACCAAGCAACATTGCTGTGAGCACTGGGACTAAGGTTGTGGTTCTGCCATTCAATACTAGAGTGGAGCTTGTTCTGCAAGACACTAGCATTATTGGAGCAGAGAGCCACCCACTTCACCTCCATGGATTCAATTTCTTCGTGGTGGGGTTTGGATTTGGAAATTTCGATCCAAAAAATGACCCGAAGAAGTACAACCTTGTTGATCCTGCTGAGAGGAACACTATTGGTGTGCCCTCTGGTGGGTGGGTTGCCCTACGCTTCCTCGCCGATAATCCAGGCGTTTGGTTTATGCACTGCCACCTTGAAGTGCACACCAGCTGGGGATTGAAGATGGCGTGGGTTGTCATGGACGGAAAGGGGCGCCACCAAAAGCTGCCTCCACCTCCCTCAGATCTTCCCAAATGTTAA

Protein Analysis

592

Amino Acids

65.33

Weight (kDa)

9.78

Isoelectric Point (pI)

32.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 48 - 160 4.4e-44 Multicopper oxidase
Cu-oxidase PF00394 172 - 323 7.1e-44 Multicopper oxidase
Cu-oxidase_2 PF07731 443 - 573 2.5e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000610)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60020 AT5G60020 AT5G60020
fragaria_vesca FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 182
AccB1I GGYRCC 1 cut(s) 1728
AccI GTMKAC 1 cut(s) 952
AccII CGCG 2 cut(s) 65, 1229
AciI CCGC 4 cut(s) 720, 1090, 1229, 1232
AclWI GGATC 2 cut(s) 1529, 1565
AcoI YGGCCR 2 cut(s) 394, 1098
AcsI RAATTY 3 cut(s) 1109, 1346, 1528
AcuI CTGAAG 1 cut(s) 727
AcyI GRCGYC 1 cut(s) 1729
AdeI CACNNNGTG 1 cut(s) 411
AfaI GTAC 6 cut(s) 78, 808, 1267, 1313, 1363, 1559
AfiI CCNNNNNNNGG 3 cut(s) 1096, 1607, 1608
AflIII ACRYGT 1 cut(s) 481
AhdI GACNNNNNGTC 2 cut(s) 461, 599
AjnI CCWGG 7 cut(s) 116, 202, 631, 829, 1204, 1220, 1642
AjuI GAANNNNNNNTTGG 2 cut(s) 1094, 1126
AleI CACNNNNGTG 1 cut(s) 1034
Alw21I GWGCWC 2 cut(s) 1391, 1680
Alw26I GTCTC 4 cut(s) 147, 607, 916, 979
Alw44I GTGCAC 1 cut(s) 1676
AlwI GGATC 2 cut(s) 1529, 1565
AoxI GGCC 7 cut(s) 206, 394, 635, 902, 916, 1098, 1207
ApaLI GTGCAC 1 cut(s) 1676
ApeKI GCWGC 5 cut(s) 896, 923, 1018, 1092, 1741
ApoI RAATTY 3 cut(s) 1109, 1346, 1528
AseI ATTAAT 1 cut(s) 621
AspLEI GCGC 2 cut(s) 65, 1731
AspS9I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1208
AsuC2I CCSGG 1 cut(s) 687
AsuHPI GGTGA 4 cut(s) 15, 376, 691, 1475
AsuNHI GCTAGC 1 cut(s) 88
AvaII GGWCC 4 cut(s) 326, 455, 593, 858
AxyI CCTNAGG 1 cut(s) 946
BaeGI GKGCMC 2 cut(s) 1602, 1680
BalI TGGCCA 2 cut(s) 396, 1100
BanI GGYRCC 1 cut(s) 1728
BarI GAAGNNNNNNTAC 2 cut(s) 1295, 1327
BbsI GAAGAC 2 cut(s) 620, 698
Bbv12I GWGCWC 2 cut(s) 1391, 1680
BbvI GCAGC 5 cut(s) 908, 910, 1005, 1104, 1728
BccI CCATC 6 cut(s) 309, 317, 395, 530, 1123, 1693
BciT130I CCWGG 7 cut(s) 118, 204, 633, 831, 1206, 1222, 1644
BclI TGATCA 3 cut(s) 243, 564, 711
BcnI CCSGG 1 cut(s) 687
BcoDI GTCTC 4 cut(s) 147, 607, 916, 979
BfaI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1263, 1425, 1452
BfoI RGCGCY 1 cut(s) 1732
BglI GCCNNNNNGGC 1 cut(s) 402
BglII AGATCT 1 cut(s) 1759
BisI GCNGC 8 cut(s) 720, 897, 924, 1019, 1093, 1230, 1233, 1742
BlpI GCTNAGC 1 cut(s) 652
BlsI GCNGC 8 cut(s) 721, 898, 925, 1020, 1094, 1231, 1234, 1743
BmcAI AGTACT 1 cut(s) 1267
Bme1390I CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1206, 1222, 1644
Bme18I GGWCC 4 cut(s) 326, 455, 593, 858
BmeRI GACNNNNNGTC 2 cut(s) 461, 599
BmgT120I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1208
BmiI GGNNCC 1 cut(s) 1730
BmrFI CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1206, 1222, 1644
BmrI ACTGGG 1 cut(s) 1401
BmsI GCATC 3 cut(s) 29, 598, 772
BmtI GCTAGC 1 cut(s) 92
BmuI ACTGGG 1 cut(s) 1401
BpiI GAAGAC 2 cut(s) 620, 698
Bpu10I CCTNAGC 1 cut(s) 437
Bpu1102I GCTNAGC 1 cut(s) 652
BpuEI CTTGAG 2 cut(s) 659, 961
BpuMI CCSGG 1 cut(s) 687
BsaHI GRCGYC 1 cut(s) 1729
BsaJI CCNNGG 7 cut(s) 203, 632, 686, 1137, 1204, 1221, 1489
BsaXI ACNNNNNCTCC 4 cut(s) 1348, 1378, 1470, 1500
Bsc4I CCNNNNNNNGG 3 cut(s) 1096, 1607, 1608
Bse1I ACTGG 4 cut(s) 290, 397, 1034, 1396
Bse21I CCTNAGG 1 cut(s) 946
Bse3DI GCAATG 2 cut(s) 747, 1377
BseBI CCWGG 7 cut(s) 118, 204, 633, 831, 1206, 1222, 1644
BseDI CCNNGG 7 cut(s) 203, 632, 686, 1137, 1204, 1221, 1489
BseGI GGATG 2 cut(s) 13, 320
BseLI CCNNNNNNNGG 3 cut(s) 1096, 1607, 1608
BseMI GCAATG 2 cut(s) 747, 1377
BseMII CTCAG 4 cut(s) 666, 960, 1569, 1770
BseNI ACTGG 4 cut(s) 290, 397, 1034, 1396
BseSI GKGCMC 2 cut(s) 1602, 1680
BseXI GCAGC 5 cut(s) 908, 910, 1005, 1104, 1728
BseYI CCCAGC 3 cut(s) 919, 1327, 1686
Bsh1236I CGCG 2 cut(s) 65, 1229
BshFI GGCC 7 cut(s) 208, 396, 637, 904, 918, 1100, 1209
BshNI GGYRCC 1 cut(s) 1728
BsiHKAI GWGCWC 2 cut(s) 1391, 1680
BsiSI CCGG 3 cut(s) 83, 686, 915
BslFI GGGAC 5 cut(s) 503, 856, 1112, 1185, 1408
BslI CCNNNNNNNGG 3 cut(s) 1096, 1607, 1608
BsmAI GTCTC 4 cut(s) 147, 607, 916, 979
BsmFI GGGAC 5 cut(s) 503, 856, 1112, 1185, 1408
BsnI GGCC 7 cut(s) 208, 396, 637, 904, 918, 1100, 1209
Bsp1286I GDGCHC 3 cut(s) 1391, 1602, 1680
Bsp1407I TGTACA 1 cut(s) 1311
Bsp143I GATC 6 cut(s) 243, 564, 711, 1534, 1570, 1759
Bsp1720I GCTNAGC 1 cut(s) 652
Bsp19I CCATGG 1 cut(s) 1489
BspACI CCGC 4 cut(s) 720, 1090, 1229, 1232
BspANI GGCC 7 cut(s) 208, 396, 637, 904, 918, 1100, 1209
BspCNI CTCAG 4 cut(s) 665, 959, 1570, 1769
BspFNI CGCG 2 cut(s) 65, 1229
BspLI GGNNCC 1 cut(s) 1730
BspOI GCTAGC 1 cut(s) 92
BspPI GGATC 2 cut(s) 1529, 1565
BspQI GCTCTTC 1 cut(s) 167
BspT107I GGYRCC 1 cut(s) 1728
BsrDI GCAATG 2 cut(s) 747, 1377
BsrGI TGTACA 1 cut(s) 1311
BsrI ACTGG 4 cut(s) 290, 397, 1034, 1396
BssECI CCNNGG 7 cut(s) 203, 632, 686, 1137, 1204, 1221, 1489
BssMI GATC 6 cut(s) 243, 564, 711, 1534, 1570, 1759
BssNI GRCGYC 1 cut(s) 1729
BssT1I CCWWGG 1 cut(s) 1489
Bst2UI CCWGG 7 cut(s) 118, 204, 633, 831, 1206, 1222, 1644
Bst4CI ACNGT 6 cut(s) 46, 187, 562, 769, 1138, 1162
Bst6I CTCTTC 1 cut(s) 167
BstACI GRCGYC 1 cut(s) 1729
BstAUI TGTACA 1 cut(s) 1311
BstC8I GCNNGC 3 cut(s) 90, 105, 420
BstDEI CTNAG 7 cut(s) 437, 652, 946, 1175, 1398, 1578, 1756
BstDSI CCRYGG 2 cut(s) 1137, 1489
BstEII GGTNACC 1 cut(s) 112
BstF5I GGATG 2 cut(s) 13, 320
BstFNI CGCG 2 cut(s) 65, 1229
BstH2I RGCGCY 1 cut(s) 1732
BstHHI GCGC 2 cut(s) 65, 1731
BstKTI GATC 6 cut(s) 246, 567, 714, 1537, 1573, 1762
BstMAI GTCTC 4 cut(s) 147, 607, 916, 979
BstMBI GATC 6 cut(s) 243, 564, 711, 1534, 1570, 1759
BstMWI GCNNNNNNNGC 4 cut(s) 26, 402, 1045, 1441
BstNI CCWGG 7 cut(s) 118, 204, 633, 831, 1206, 1222, 1644
BstNSI RCATGY 3 cut(s) 107, 422, 485
BstPI GGTNACC 1 cut(s) 112
BstSCI CCNGG 8 cut(s) 116, 202, 631, 685, 829, 1204, 1220, 1642
BstSLI GKGCMC 2 cut(s) 1602, 1680
BstUI CGCG 2 cut(s) 65, 1229
BstV1I GCAGC 5 cut(s) 908, 910, 1005, 1104, 1728
BstV2I GAAGAC 2 cut(s) 620, 698
BstX2I RGATCY 1 cut(s) 1759
BstXI CCANNNNNNTGG 1 cut(s) 1650
BstYI RGATCY 1 cut(s) 1759
Bsu36I CCTNAGG 1 cut(s) 946
BsuRI GGCC 7 cut(s) 208, 396, 637, 904, 918, 1100, 1209
BtgI CCRYGG 2 cut(s) 1137, 1489
BtsCI GGATG 2 cut(s) 13, 320
BtsI GCAGTG 3 cut(s) 99, 792, 1660
BtsIMutI CAGTG 9 cut(s) 99, 283, 390, 567, 765, 792, 1041, 1389, 1660
Cac8I GCNNGC 3 cut(s) 90, 105, 420
CfoI GCGC 2 cut(s) 65, 1731
Cfr13I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1208
Csp6I GTAC 6 cut(s) 77, 807, 1266, 1312, 1362, 1558
CspCI CAANNNNNGTGG 2 cut(s) 413, 448
CviQI GTAC 6 cut(s) 77, 807, 1266, 1312, 1362, 1558
DdeI CTNAG 7 cut(s) 437, 652, 946, 1175, 1398, 1578, 1756
DinI GGCGCC 1 cut(s) 1730
DpnI GATC 6 cut(s) 245, 566, 713, 1536, 1572, 1761
DpnII GATC 6 cut(s) 243, 564, 711, 1534, 1570, 1759
DraIII CACNNNGTG 1 cut(s) 411
DriI GACNNNNNGTC 2 cut(s) 461, 599
EaeI YGGCCR 2 cut(s) 394, 1098
Eam1104I CTCTTC 1 cut(s) 167
Eam1105I GACNNNNNGTC 2 cut(s) 461, 599
EarI CTCTTC 1 cut(s) 167
Eco130I CCWWGG 1 cut(s) 1489
Eco147I AGGCCT 1 cut(s) 904
Eco47I GGWCC 4 cut(s) 326, 455, 593, 858
Eco57I CTGAAG 1 cut(s) 727
Eco81I CCTNAGG 1 cut(s) 946
Eco91I GGTNACC 1 cut(s) 112
EcoO109I RGGNCCY 2 cut(s) 206, 635
EcoO65I GGTNACC 1 cut(s) 112
EcoRII CCWGG 7 cut(s) 116, 202, 631, 829, 1204, 1220, 1642
EcoT14I CCWWGG 1 cut(s) 1489
EgeI GGCGCC 1 cut(s) 1730
EheI GGCGCC 1 cut(s) 1730
ErhI CCWWGG 1 cut(s) 1489
FaqI GGGAC 5 cut(s) 503, 856, 1112, 1185, 1408
FbaI TGATCA 3 cut(s) 243, 564, 711
FblI GTMKAC 1 cut(s) 952
Fnu4HI GCNGC 8 cut(s) 720, 897, 924, 1019, 1093, 1230, 1233, 1742
FokI GGATG 1 cut(s) 327
Fsp4HI GCNGC 8 cut(s) 720, 897, 924, 1019, 1093, 1230, 1233, 1742
FspBI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1263, 1425, 1452
GlaI GCGC 2 cut(s) 64, 1730
GluI GCNGC 8 cut(s) 720, 897, 924, 1019, 1093, 1230, 1233, 1742
GsaI CCCAGC 3 cut(s) 923, 1331, 1690
HaeII RGCGCY 1 cut(s) 1732
HaeIII GGCC 7 cut(s) 208, 396, 637, 904, 918, 1100, 1209
HapII CCGG 3 cut(s) 83, 686, 915
HhaI GCGC 2 cut(s) 65, 1731
Hin1I GRCGYC 1 cut(s) 1729
Hin6I GCGC 2 cut(s) 63, 1729
HinP1I GCGC 2 cut(s) 63, 1729
HinfI GANTC 2 cut(s) 213, 1494
HpaII CCGG 3 cut(s) 83, 686, 915
HphI GGTGA 4 cut(s) 15, 376, 691, 1475
Hpy166II GTNNAC 6 cut(s) 77, 953, 1141, 1312, 1314, 1678
Hpy188I TCNGA 5 cut(s) 267, 357, 533, 607, 1759
Hpy188III TCNNGA 2 cut(s) 591, 1129
Hpy8I GTNNAC 6 cut(s) 77, 953, 1141, 1312, 1314, 1678
HpyAV CCTTC 5 cut(s) 221, 339, 517, 1283, 1297
HpyCH4III ACNGT 6 cut(s) 46, 187, 562, 769, 1138, 1162
HpyCH4V TGCA 8 cut(s) 20, 107, 785, 1121, 1258, 1444, 1660, 1678
HpyF10VI GCNNNNNNNGC 4 cut(s) 26, 402, 1045, 1441
HpyF3I CTNAG 7 cut(s) 437, 652, 946, 1175, 1398, 1578, 1756
Hsp92I GRCGYC 1 cut(s) 1729
HspAI GCGC 2 cut(s) 63, 1729
KasI GGCGCC 1 cut(s) 1728
Ksp22I TGATCA 3 cut(s) 243, 564, 711
Kzo9I GATC 6 cut(s) 243, 564, 711, 1534, 1570, 1759
LguI GCTCTTC 1 cut(s) 167
LmnI GCTCC 3 cut(s) 85, 1432, 1463
Lsp1109I GCAGC 5 cut(s) 908, 910, 1005, 1104, 1728
LweI GCATC 3 cut(s) 29, 598, 772
MaeI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1263, 1425, 1452
MaeIII GTNAC 3 cut(s) 112, 151, 274
MalI GATC 6 cut(s) 245, 566, 713, 1536, 1572, 1761
MboI GATC 6 cut(s) 243, 564, 711, 1534, 1570, 1759
MflI RGATCY 1 cut(s) 1759
MhlI GDGCHC 3 cut(s) 1391, 1602, 1680
MlsI TGGCCA 2 cut(s) 396, 1100
MluCI AATT 7 cut(s) 294, 302, 351, 1109, 1346, 1498, 1528
MluNI TGGCCA 2 cut(s) 396, 1100
Mly113I GGCGCC 1 cut(s) 1729
Mox20I TGGCCA 2 cut(s) 396, 1100
MscI TGGCCA 2 cut(s) 396, 1100
MseI TTAA 3 cut(s) 305, 621, 1774
MslI CAYNNNNRTG 5 cut(s) 288, 412, 1034, 1382, 1488
Msp20I TGGCCA 2 cut(s) 396, 1100
MspA1I CMGCKG 2 cut(s) 923, 1686
MspI CCGG 3 cut(s) 83, 686, 915
MspR9I CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1206, 1222, 1644
MvaI CCWGG 7 cut(s) 118, 204, 633, 831, 1206, 1222, 1644
MvnI CGCG 2 cut(s) 65, 1229
MwoI GCNNNNNNNGC 4 cut(s) 26, 402, 1045, 1441
NarI GGCGCC 1 cut(s) 1729
NciI CCSGG 1 cut(s) 687
NcoI CCATGG 1 cut(s) 1489
NdeII GATC 6 cut(s) 243, 564, 711, 1534, 1570, 1759
NheI GCTAGC 1 cut(s) 88
NlaIV GGNNCC 1 cut(s) 1730
NmuCI GTSAC 2 cut(s) 151, 274
NspI RCATGY 3 cut(s) 107, 422, 485
OliI CACNNNNGTG 1 cut(s) 1034
PaeI GCATGC 2 cut(s) 107, 422
PceI AGGCCT 1 cut(s) 904
PciI ACATGT 1 cut(s) 481
PciSI GCTCTTC 1 cut(s) 167
PfeI GAWTC 2 cut(s) 213, 1494
PflFI GACNNNGTC 1 cut(s) 1176
PkrI GCNGC 8 cut(s) 721, 898, 925, 1020, 1094, 1231, 1234, 1743
PluTI GGCGCC 1 cut(s) 1732
PscI ACATGT 1 cut(s) 481
PshBI ATTAAT 1 cut(s) 621
PsiI TTATAA 1 cut(s) 182
Psp6I CCWGG 7 cut(s) 116, 202, 631, 829, 1204, 1220, 1642
PspEI GGTNACC 1 cut(s) 112
PspFI CCCAGC 3 cut(s) 919, 1327, 1686
PspGI CCWGG 7 cut(s) 116, 202, 631, 829, 1204, 1220, 1642
PspN4I GGNNCC 1 cut(s) 1730
PspPI GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1208
PsuI RGATCY 1 cut(s) 1759
PsyI GACNNNGTC 1 cut(s) 1176
PvuII CAGCTG 2 cut(s) 923, 1686
RsaI GTAC 6 cut(s) 78, 808, 1267, 1313, 1363, 1559
RsaNI GTAC 6 cut(s) 77, 807, 1266, 1312, 1362, 1558
RseI CAYNNNNRTG 5 cut(s) 288, 412, 1034, 1382, 1488
SapI GCTCTTC 1 cut(s) 167
SaqAI TTAA 3 cut(s) 305, 621, 1774
SatI GCNGC 8 cut(s) 720, 897, 924, 1019, 1093, 1230, 1233, 1742
Sau3AI GATC 6 cut(s) 243, 564, 711, 1534, 1570, 1759
Sau96I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1208
ScaI AGTACT 1 cut(s) 1267
ScrFI CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1206, 1222, 1644
SduI GDGCHC 3 cut(s) 1391, 1602, 1680
SfaNI GCATC 3 cut(s) 29, 598, 772
SfoI GGCGCC 1 cut(s) 1730
SinI GGWCC 4 cut(s) 326, 455, 593, 858
SmiMI CAYNNNNRTG 5 cut(s) 288, 412, 1034, 1382, 1488
SmlI CTYRAG 2 cut(s) 674, 976
SmoI CTYRAG 2 cut(s) 674, 976
SphI GCATGC 2 cut(s) 107, 422
Sse9I AATT 7 cut(s) 294, 302, 351, 1109, 1346, 1498, 1528
SseBI AGGCCT 1 cut(s) 904
SsiI CCGC 4 cut(s) 720, 1090, 1229, 1232
SspDI GGCGCC 1 cut(s) 1728
SspMI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1263, 1425, 1452
StuI AGGCCT 1 cut(s) 904
StyD4I CCNGG 8 cut(s) 116, 202, 631, 685, 829, 1204, 1220, 1642
StyI CCWWGG 1 cut(s) 1489
TaaI ACNGT 6 cut(s) 46, 187, 562, 769, 1138, 1162
TaqI TCGA 2 cut(s) 957, 1533
TasI AATT 7 cut(s) 294, 302, 351, 1109, 1346, 1498, 1528
TatI WGTACW 4 cut(s) 76, 1265, 1311, 1557
TauI GCSGC 3 cut(s) 722, 1232, 1235
TfiI GAWTC 2 cut(s) 213, 1494
Tru1I TTAA 3 cut(s) 305, 621, 1774
Tru9I TTAA 3 cut(s) 305, 621, 1774
TscAI CASTG 9 cut(s) 99, 290, 397, 567, 772, 792, 1041, 1396, 1667
TseFI GTSAC 2 cut(s) 151, 274
TseI GCWGC 5 cut(s) 896, 923, 1018, 1092, 1741
Tsp45I GTSAC 2 cut(s) 151, 274
TspDTI ATGAA 3 cut(s) 321, 978, 1085
TspGWI ACGGA 1 cut(s) 1734
TspRI CASTG 9 cut(s) 99, 290, 397, 567, 772, 792, 1041, 1396, 1667
Tth111I GACNNNGTC 1 cut(s) 1176
VneI GTGCAC 1 cut(s) 1676
VpaK11BI GGWCC 4 cut(s) 326, 455, 593, 858
VspI ATTAAT 1 cut(s) 621
XapI RAATTY 3 cut(s) 1109, 1346, 1528
XceI RCATGY 3 cut(s) 107, 422, 485
XcmI CCANNNNNNNNNTGG 1 cut(s) 889
XmiI GTMKAC 1 cut(s) 952
XspI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1263, 1425, 1452
ZrmI AGTACT 1 cut(s) 1267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.