Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000610

Physical Location & Seq

Genomic Coordinates Reverse (-)

67891312 .. 67894334

Gene Structure 3023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035514

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGGTGTCGCTCTTTTTTCATTTGCTAGGCTCTTTGTTCTCTCTTTCATCACATTGGGTCTCATTCCTCAGCTAGCTCCTGCAAGCATAACAAGGCAGTACAAATTTGATGTACAACTGCAAAATGTGACAAGGCTGTGCCATACGAAAAGCATTGTAACCATAAACGGTCAATTCCCTGGGCCTCGAATTGTTGCTAGGGAGGGTGATCGCCTCCTCATTGAAGTTGTTAACCATGTCCGAAGCAACATTTCCATCCATTGGCATGGAATTCGACAGCTTCGAACTGGGTGGGCTGATGGTCCGGCATACATTACCCAATGCCCAATACAAACCGGCAACAGCTATGTGTACAACTTCACCATTGTAGGCCAGAGGGGCACTCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACCATCTATGGCCCCCTTATCATTTTTCCGAAGCGTGGTGTTCCTTATCCATTCACCAAACCCTATAAGGAAGTTCCCATCATCTTTGGAGAATGGTGGAGTGCAGATCCTGAAGCAGTCATAAACCAGGCCTTGCAAACTGGGGGAGGACCAAATGTTTCTGATGCTTACACCATCAATGGACTCCCAGGGCCATTATATAACTGCTCTGCCAAAGATACTTTCAAGCTAAAGGTTCAACCTGGGAAGACATACCTTCTGCGCCTAATCAACGCAGCGCTGAATGACGAGCTGTTCTTCAGCATTGCAAACCACACCCTCAAAGTGGTGGAAACTGATGCAGTCTACGTCAAACCCTTCGAGACCAACACCATTCTCATTGCCCCGGGACAAACCACAAATGTTCTTCTCAAAACAAAACCTAACTATCCAAACGCCACATTTTTCATGACTGCAAGGCCATACGTGACTGGTCTAGGCACCTTTGATAACTCCACTCTTGCTGGCATTTTAGAATACGAAACGACTACACTTCATTCAACCCTCCCAATGAACAAACTTCCACTCCACAAACCAATTCTCCCAGTTCTAAATGACACATCATTTGCAACAAAATTCGCCAACAAACTCCGTAGCTTGAACACCCCCCAGTTCCCTGCTAATGTTCCACAGAAAGTTGACAAGCATTTGTTCTTCACCATAGGGCTTGGAACCAACCCATGTAGCCAGCAACACAACAACCAGACCTGCCAGGGACCTAATGGAACCATGTTTGCTGCTTCAATCAACAACATTTCTTTCACTATGCCAAACACTGCCCTGCTCCAATCCCACTTCTTTGGCCTATCCAATGGGGTTTATTCCCCTAATTTTCCAATCAGTCCTTTAATTCCATTTAATTACACTGGAGCCCTGCTGAACAATACTAATGTGGGCAATGGTACTAAGCTAATGGTGCTTCCCTTTAACACTAGTGTGGAGTTGGTGTTGCAGGACACTAGTATTCTTGGTGCTGAAAGTCATCCTCTTCATCTTCATGGCTTTAATTTCTTTGTTGTTGGTCAAGGTTTTGGCAACTTCGACCAAAATAAGGACCCTAGGAAGTTCAATCTGATTGACCCTGTTGAGAGAAACACCGTGGGTGTGCCCTCCGGCGGGTGGGTTGCTATTCGGTTTCTAGCAGATAACCCGGGTGTTTGGTTCATGCATTGCCACCTTGAGATCCATACCAGCTGGGGCTTGAAGATGGCCTGGGTAGTCTTAGATGGTAAGCTTCCCAATCAAACGTTGCTTCCTCCGCCACTGGATCTGCCCAAATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

581

Amino Acids

64.36

Weight (kDa)

9.21

Isoelectric Point (pI)

29.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 151	2.8e-42	Multicopper oxidase
Cu-oxidase	PF00394	164 - 314	6.4e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	440 - 562	6.9e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60020 AT5G60020 AT5G60020
fragaria_vesca	FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica	MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica	Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis	pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis	RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata	RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora	Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii	Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa	Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha	Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana	Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1175
AccB1I	GGYRCC	1 cut(s)	899
AccB7I	CCANNNNNTGG	1 cut(s)	261
AccI	GTMKAC	1 cut(s)	765
AciI	CCGC	2 cut(s)	1575, 1718
AclI	AACGTT	1 cut(s)	1706
AclWI	GGATC	3 cut(s)	521, 1636, 1734
AcsI	RAATTY	3 cut(s)	104, 270, 1034
AcuI	CTGAAG	2 cut(s)	552, 703
AfaI	GTAC	4 cut(s)	101, 114, 353, 1363
AfeI	AGCGCT	1 cut(s)	699
AfiI	CCNNNNNNNGG	7 cut(s)	261, 455, 745, 1510, 1574, 1575, 1578
AgsI	TTSAA	8 cut(s)	224, 646, 659, 960, 1060, 1203, 1528, 1663
AhlI	ACTAGT	2 cut(s)	1391, 1418
AjnI	CCWGG	6 cut(s)	178, 546, 607, 661, 1170, 1670
AjuI	GAANNNNNNNTTGG	2 cut(s)	626, 658
AleI	CACNNNNGTG	1 cut(s)	1394
Alw26I	GTCTC	2 cut(s)	65, 776
AlwI	GGATC	3 cut(s)	521, 1636, 1734
AlwNI	CAGNNNCTG	1 cut(s)	530
Ama87I	CYCGRG	2 cut(s)	805, 1609
Aor51HI	AGCGCT	1 cut(s)	699
AoxI	GGCC	8 cut(s)	182, 370, 430, 549, 611, 878, 1261, 1668
ApeKI	GCWGC	2 cut(s)	695, 1196
ApoI	RAATTY	3 cut(s)	104, 270, 1034
ArsI	GACNNNNNNTTYG	2 cut(s)	1007, 1039
AspA2I	CCTAGG	1 cut(s)	1517
AspLEI	GCGC	2 cut(s)	684, 700
AspS9I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1175, 1513
AsuC2I	CCSGG	4 cut(s)	806, 807, 1610, 1611
AsuHPI	GGTGA	4 cut(s)	218, 352, 466, 1108
AsuII	TTCGAA	1 cut(s)	283
AsuNHI	GCTAGC	1 cut(s)	73
AvaI	CYCGRG	2 cut(s)	805, 1609
AvaII	GGWCC	4 cut(s)	302, 569, 1175, 1513
AvrII	CCTAGG	1 cut(s)	1517
BaeGI	GKGCMC	2 cut(s)	383, 1569
BanI	GGYRCC	1 cut(s)	899
BanII	GRGCYC	1 cut(s)	1333
BbsI	GAAGAC	1 cut(s)	674
BbvCI	CCTCAGC	1 cut(s)	69
BbvI	GCAGC	2 cut(s)	707, 1183
BccI	CCATC	7 cut(s)	263, 293, 431, 506, 602, 1660, 1679
BcgI	CGANNNNNNTGC	2 cut(s)	254, 288
BciT130I	CCWGG	6 cut(s)	180, 548, 609, 663, 1172, 1672
BcnI	CCSGG	4 cut(s)	806, 807, 1610, 1611
BcoDI	GTCTC	2 cut(s)	65, 776
BcuI	ACTAGT	2 cut(s)	1391, 1418
BfaI	CTAG	8 cut(s)	27, 74, 198, 896, 1392, 1419, 1518, 1598
BfoI	RGCGCY	1 cut(s)	701
BfuAI	ACCTGC	1 cut(s)	1175
BglI	GCCNNNNNGGC	1 cut(s)	378
BisI	GCNGC	2 cut(s)	696, 1197
BlnI	CCTAGG	1 cut(s)	1517
BlsI	GCNGC	2 cut(s)	697, 1198
Bme18I	GGWCC	4 cut(s)	302, 569, 1175, 1513
BmeT110I	CYCGRG	2 cut(s)	805, 1609
BmgT120I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1175, 1513
BmiI	GGNNCC	7 cut(s)	433, 901, 1132, 1176, 1186, 1330, 1515
BmrI	ACTGGG	4 cut(s)	297, 570, 998, 1063
BmsI	GCATC	2 cut(s)	574, 748
BmtI	GCTAGC	1 cut(s)	77
BmuI	ACTGGG	4 cut(s)	297, 570, 998, 1063
BpiI	GAAGAC	1 cut(s)	674
BplI	GAGNNNNNCTC	2 cut(s)	367, 399
BpmI	CTGGAG	1 cut(s)	1347
Bpu10I	CCTNAGC	1 cut(s)	69
Bpu14I	TTCGAA	1 cut(s)	283
BpuEI	CTTGAG	1 cut(s)	1658
BpuMI	CCSGG	4 cut(s)	806, 807, 1610, 1611
BsaAI	YACGTR	1 cut(s)	886
BsaI	GGTCTC	2 cut(s)	65, 776
BsaXI	ACNNNNNCTCC	6 cut(s)	969, 984, 999, 1014, 1391, 1421
Bsc4I	CCNNNNNNNGG	7 cut(s)	261, 455, 745, 1510, 1574, 1575, 1578
Bse118I	RCCGGY	1 cut(s)	335
Bse1I	ACTGG	7 cut(s)	292, 565, 895, 1004, 1069, 1330, 1728
Bse3DI	GCAATG	4 cut(s)	723, 798, 1363, 1627
BseBI	CCWGG	6 cut(s)	180, 548, 609, 663, 1172, 1672
BseGI	GGATG	2 cut(s)	255, 1441
BseLI	CCNNNNNNNGG	7 cut(s)	261, 455, 745, 1510, 1574, 1575, 1578
BseMI	GCAATG	4 cut(s)	723, 798, 1363, 1627
BseMII	CTCAG	1 cut(s)	83
BseNI	ACTGG	7 cut(s)	292, 565, 895, 1004, 1069, 1330, 1728
BseRI	GAGGAG	1 cut(s)	206
BseSI	GKGCMC	2 cut(s)	383, 1569
BseXI	GCAGC	2 cut(s)	707, 1183
BseYI	CCCAGC	1 cut(s)	1653
BsgI	GTGCAG	1 cut(s)	543
BshFI	GGCC	8 cut(s)	184, 372, 432, 551, 613, 880, 1263, 1670
BshNI	GGYRCC	1 cut(s)	899
BsiHKCI	CYCGRG	2 cut(s)	805, 1609
BsiSI	CCGG	5 cut(s)	305, 336, 806, 1572, 1610
BslFI	GGGAC	2 cut(s)	822, 1188
BslI	CCNNNNNNNGG	7 cut(s)	261, 455, 745, 1510, 1574, 1575, 1578
BsmAI	GTCTC	2 cut(s)	65, 776
BsmFI	GGGAC	2 cut(s)	822, 1188
BsnI	GGCC	8 cut(s)	184, 372, 432, 551, 613, 880, 1263, 1670
Bso31I	GGTCTC	2 cut(s)	65, 776
BsoBI	CYCGRG	2 cut(s)	805, 1609
Bsp119I	TTCGAA	1 cut(s)	283
Bsp1286I	GDGCHC	3 cut(s)	383, 1333, 1569
Bsp1407I	TGTACA	2 cut(s)	112, 351
Bsp143I	GATC	5 cut(s)	208, 416, 526, 1641, 1726
BspACI	CCGC	2 cut(s)	1575, 1718
BspANI	GGCC	8 cut(s)	184, 372, 432, 551, 613, 880, 1263, 1670
BspCNI	CTCAG	1 cut(s)	82
BspHI	TCATGA	1 cut(s)	867
BspLI	GGNNCC	7 cut(s)	433, 901, 1132, 1176, 1186, 1330, 1515
BspMI	ACCTGC	1 cut(s)	1175
BspOI	GCTAGC	1 cut(s)	77
BspPI	GGATC	3 cut(s)	521, 1636, 1734
BspT104I	TTCGAA	1 cut(s)	283
BspT107I	GGYRCC	1 cut(s)	899
BspTNI	GGTCTC	2 cut(s)	65, 776
BsrDI	GCAATG	4 cut(s)	723, 798, 1363, 1627
BsrFI	RCCGGY	1 cut(s)	335
BsrGI	TGTACA	2 cut(s)	112, 351
BsrI	ACTGG	7 cut(s)	292, 565, 895, 1004, 1069, 1330, 1728
BssAI	RCCGGY	1 cut(s)	335
BssMI	GATC	5 cut(s)	208, 416, 526, 1641, 1726
BssT1I	CCWWGG	1 cut(s)	1517
Bst2UI	CCWGG	6 cut(s)	180, 548, 609, 663, 1172, 1672
Bst4CI	ACNGT	2 cut(s)	170, 1558
Bst6I	CTCTTC	1 cut(s)	1452
BstAUI	TGTACA	2 cut(s)	112, 351
BstBAI	YACGTR	1 cut(s)	886
BstBI	TTCGAA	1 cut(s)	283
BstC8I	GCNNGC	5 cut(s)	75, 85, 396, 925, 1148
BstDEI	CTNAG	4 cut(s)	69, 413, 1365, 1681
BstDSI	CCRYGG	1 cut(s)	1557
BstF5I	GGATG	2 cut(s)	255, 1441
BstH2I	RGCGCY	1 cut(s)	701
BstHHI	GCGC	2 cut(s)	684, 700
BstKTI	GATC	5 cut(s)	211, 419, 529, 1644, 1729
BstMAI	GTCTC	2 cut(s)	65, 776
BstMBI	GATC	5 cut(s)	208, 416, 526, 1641, 1726
BstMWI	GCNNNNNNNGC	3 cut(s)	378, 1375, 1717
BstNI	CCWGG	6 cut(s)	180, 548, 609, 663, 1172, 1672
BstNSI	RCATGY	1 cut(s)	398
BstSLI	GKGCMC	2 cut(s)	383, 1569
BstV1I	GCAGC	2 cut(s)	707, 1183
BstV2I	GAAGAC	1 cut(s)	674
BstX2I	RGATCY	3 cut(s)	526, 1641, 1726
BstXI	CCANNNNNNTGG	2 cut(s)	266, 1259
BstYI	RGATCY	3 cut(s)	526, 1641, 1726
BsuRI	GGCC	8 cut(s)	184, 372, 432, 551, 613, 880, 1263, 1670
BtgI	CCRYGG	1 cut(s)	1557
BtsCI	GGATG	2 cut(s)	255, 1441
BtsI	GCAGTG	1 cut(s)	1233
BtsIMutI	CAGTG	3 cut(s)	1233, 1323, 1721
BveI	ACCTGC	1 cut(s)	1175
Cac8I	GCNNGC	5 cut(s)	75, 85, 396, 925, 1148
CaiI	CAGNNNCTG	1 cut(s)	530
CciI	TCATGA	1 cut(s)	867
CfoI	GCGC	2 cut(s)	684, 700
Cfr10I	RCCGGY	1 cut(s)	335
Cfr13I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1175, 1513
Cfr9I	CCCGGG	2 cut(s)	805, 1609
Csp6I	GTAC	4 cut(s)	100, 113, 352, 1362
CviAII	CATG	9 cut(s)	236, 266, 395, 408, 868, 1140, 1189, 1457, 1624
CviQI	GTAC	4 cut(s)	100, 113, 352, 1362
DdeI	CTNAG	4 cut(s)	69, 413, 1365, 1681
DpnI	GATC	5 cut(s)	210, 418, 528, 1643, 1728
DpnII	GATC	5 cut(s)	208, 416, 526, 1641, 1726
Eam1104I	CTCTTC	1 cut(s)	1452
EarI	CTCTTC	1 cut(s)	1452
EciI	GGCGGA	1 cut(s)	1707
Eco130I	CCWWGG	1 cut(s)	1517
Eco147I	AGGCCT	1 cut(s)	551
Eco24I	GRGCYC	1 cut(s)	1333
Eco31I	GGTCTC	2 cut(s)	65, 776
Eco47I	GGWCC	4 cut(s)	302, 569, 1175, 1513
Eco47III	AGCGCT	1 cut(s)	699
Eco57I	CTGAAG	2 cut(s)	552, 703
Eco88I	CYCGRG	2 cut(s)	805, 1609
EcoO109I	RGGNCCY	2 cut(s)	1175, 1513
EcoRI	GAATTC	1 cut(s)	270
EcoRII	CCWGG	6 cut(s)	178, 546, 607, 661, 1170, 1670
EcoT14I	CCWWGG	1 cut(s)	1517
EcoT22I	ATGCAT	1 cut(s)	1629
EcoT38I	GRGCYC	1 cut(s)	1333
ErhI	CCWWGG	1 cut(s)	1517
FaeI	CATG	9 cut(s)	239, 269, 398, 411, 871, 1143, 1192, 1460, 1627
FaqI	GGGAC	2 cut(s)	822, 1188
FatI	CATG	9 cut(s)	235, 265, 394, 407, 867, 1139, 1188, 1456, 1623
FauI	CCCGC	1 cut(s)	1568
FblI	GTMKAC	1 cut(s)	765
Fnu4HI	GCNGC	2 cut(s)	696, 1197
FokI	GGATG	2 cut(s)	242, 1428
FriOI	GRGCYC	1 cut(s)	1333
Fsp4HI	GCNGC	2 cut(s)	696, 1197
FspBI	CTAG	8 cut(s)	27, 74, 198, 896, 1392, 1419, 1518, 1598
GlaI	GCGC	2 cut(s)	683, 699
GluI	GCNGC	2 cut(s)	696, 1197
GsaI	CCCAGC	1 cut(s)	1657
GsuI	CTGGAG	1 cut(s)	1347
HaeII	RGCGCY	1 cut(s)	701
HaeIII	GGCC	8 cut(s)	184, 372, 432, 551, 613, 880, 1263, 1670
HapII	CCGG	5 cut(s)	305, 336, 806, 1572, 1610
HhaI	GCGC	2 cut(s)	684, 700
Hin1II	CATG	9 cut(s)	239, 269, 398, 411, 871, 1143, 1192, 1460, 1627
Hin6I	GCGC	2 cut(s)	682, 698
HinP1I	GCGC	2 cut(s)	682, 698
HincII	GTYRAC	2 cut(s)	232, 1099
HindII	GTYRAC	2 cut(s)	232, 1099
HindIII	AAGCTT	1 cut(s)	1691
HinfI	GANTC	1 cut(s)	603
HpaI	GTTAAC	1 cut(s)	232
HpaII	CCGG	5 cut(s)	305, 336, 806, 1572, 1610
HphI	GGTGA	4 cut(s)	218, 352, 466, 1108
Hpy166II	GTNNAC	4 cut(s)	232, 352, 766, 1099
Hpy188I	TCNGA	4 cut(s)	242, 450, 583, 1533
Hpy188III	TCNNGA	3 cut(s)	530, 781, 868
Hpy8I	GTNNAC	4 cut(s)	232, 352, 766, 1099
HpyAV	CCTTC	2 cut(s)	686, 787
HpyCH4III	ACNGT	2 cut(s)	170, 1558
HpyCH4IV	ACGT	3 cut(s)	768, 885, 1706
HpyF10VI	GCNNNNNNNGC	3 cut(s)	378, 1375, 1717
HpyF3I	CTNAG	4 cut(s)	69, 413, 1365, 1681
HpySE526I	ACGT	3 cut(s)	768, 885, 1706
Hsp92II	CATG	9 cut(s)	239, 269, 398, 411, 871, 1143, 1192, 1460, 1627
HspAI	GCGC	2 cut(s)	682, 698
KspAI	GTTAAC	1 cut(s)	232
Kzo9I	GATC	5 cut(s)	208, 416, 526, 1641, 1726
LmnI	GCTCC	3 cut(s)	82, 1248, 1328
Lsp1109I	GCAGC	2 cut(s)	707, 1183
LweI	GCATC	2 cut(s)	574, 748
MaeI	CTAG	8 cut(s)	27, 74, 198, 896, 1392, 1419, 1518, 1598
MaeII	ACGT	3 cut(s)	768, 885, 1706
MaeIII	GTNAC	3 cut(s)	127, 157, 886
MalI	GATC	5 cut(s)	210, 418, 528, 1643, 1728
MboI	GATC	5 cut(s)	208, 416, 526, 1641, 1726
MboII	GAAGA	7 cut(s)	679, 709, 818, 1105, 1439, 1445, 1675
MflI	RGATCY	3 cut(s)	526, 1641, 1726
MhlI	GDGCHC	3 cut(s)	383, 1333, 1569
MlyI	GAGTC	1 cut(s)	597
Mph1103I	ATGCAT	1 cut(s)	1629
MseI	TTAA	5 cut(s)	231, 1307, 1317, 1386, 1464
MslI	CAYNNNNRTG	3 cut(s)	264, 1394, 1455
MspA1I	CMGCKG	1 cut(s)	1653
MspI	CCGG	5 cut(s)	305, 336, 806, 1572, 1610
MvaI	CCWGG	6 cut(s)	180, 548, 609, 663, 1172, 1672
MwoI	GCNNNNNNNGC	3 cut(s)	378, 1375, 1717
NciI	CCSGG	4 cut(s)	806, 807, 1610, 1611
NdeII	GATC	5 cut(s)	208, 416, 526, 1641, 1726
NheI	GCTAGC	1 cut(s)	73
NlaIII	CATG	9 cut(s)	239, 269, 398, 411, 871, 1143, 1192, 1460, 1627
NlaIV	GGNNCC	7 cut(s)	433, 901, 1132, 1176, 1186, 1330, 1515
NmuCI	GTSAC	2 cut(s)	127, 886
NsiI	ATGCAT	1 cut(s)	1629
NspI	RCATGY	1 cut(s)	398
NspV	TTCGAA	1 cut(s)	283
OliI	CACNNNNGTG	1 cut(s)	1394
PaeI	GCATGC	1 cut(s)	398
PagI	TCATGA	1 cut(s)	867
PasI	CCCWGGG	2 cut(s)	179, 608
PceI	AGGCCT	1 cut(s)	551
PcsI	WCGNNNNNNNCGW	1 cut(s)	280
PflMI	CCANNNNNTGG	1 cut(s)	261
PkrI	GCNGC	2 cut(s)	697, 1198
PleI	GAGTC	1 cut(s)	597
PpsI	GAGTC	1 cut(s)	597
Ppu21I	YACGTR	1 cut(s)	886
PpuMI	RGGWCCY	2 cut(s)	1175, 1513
Psp1406I	AACGTT	1 cut(s)	1706
Psp5II	RGGWCCY	2 cut(s)	1175, 1513
Psp6I	CCWGG	6 cut(s)	178, 546, 607, 661, 1170, 1670
PspFI	CCCAGC	1 cut(s)	1653
PspGI	CCWGG	6 cut(s)	178, 546, 607, 661, 1170, 1670
PspN4I	GGNNCC	7 cut(s)	433, 901, 1132, 1176, 1186, 1330, 1515
PspPI	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1175, 1513
PspPPI	RGGWCCY	2 cut(s)	1175, 1513
PstNI	CAGNNNCTG	1 cut(s)	530
PsuI	RGATCY	3 cut(s)	526, 1641, 1726
PvuII	CAGCTG	1 cut(s)	1653
RsaI	GTAC	4 cut(s)	101, 114, 353, 1363
RsaNI	GTAC	4 cut(s)	100, 113, 352, 1362
RseI	CAYNNNNRTG	3 cut(s)	264, 1394, 1455
SaqAI	TTAA	5 cut(s)	231, 1307, 1317, 1386, 1464
SatI	GCNGC	2 cut(s)	696, 1197
Sau3AI	GATC	5 cut(s)	208, 416, 526, 1641, 1726
Sau96I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1175, 1513
SchI	GAGTC	1 cut(s)	597
SduI	GDGCHC	3 cut(s)	383, 1333, 1569
SfaNI	GCATC	2 cut(s)	574, 748
SfuI	TTCGAA	1 cut(s)	283
SinI	GGWCC	4 cut(s)	302, 569, 1175, 1513
SmaI	CCCGGG	2 cut(s)	807, 1611
SmiMI	CAYNNNNRTG	3 cut(s)	264, 1394, 1455
SmlI	CTYRAG	1 cut(s)	1637
SmoI	CTYRAG	1 cut(s)	1637
SpeI	ACTAGT	2 cut(s)	1391, 1418
SphI	GCATGC	1 cut(s)	398
SseBI	AGGCCT	1 cut(s)	551
SsiI	CCGC	2 cut(s)	1575, 1718
SspMI	CTAG	8 cut(s)	27, 74, 198, 896, 1392, 1419, 1518, 1598
StuI	AGGCCT	1 cut(s)	551
StyI	CCWWGG	1 cut(s)	1517
TaaI	ACNGT	2 cut(s)	170, 1558
TaiI	ACGT	3 cut(s)	771, 888, 1709
TaqI	TCGA	5 cut(s)	187, 274, 283, 780, 1500
TatI	WGTACW	3 cut(s)	99, 112, 351
Tru1I	TTAA	5 cut(s)	231, 1307, 1317, 1386, 1464
Tru9I	TTAA	5 cut(s)	231, 1307, 1317, 1386, 1464
TscAI	CASTG	3 cut(s)	1240, 1330, 1728
TseFI	GTSAC	2 cut(s)	127, 886
TseI	GCWGC	2 cut(s)	695, 1196
Tsp45I	GTSAC	2 cut(s)	127, 886
TspDTI	ATGAA	9 cut(s)	9, 37, 396, 856, 944, 986, 1439, 1445, 1612
TspGWI	ACGGA	1 cut(s)	1040
TspMI	CCCGGG	2 cut(s)	805, 1609
TspRI	CASTG	3 cut(s)	1240, 1330, 1728
Van91I	CCANNNNNTGG	1 cut(s)	261
VpaK11BI	GGWCC	4 cut(s)	302, 569, 1175, 1513
XapI	RAATTY	3 cut(s)	104, 270, 1034
XceI	RCATGY	1 cut(s)	398
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1178
XmaI	CCCGGG	2 cut(s)	805, 1609
XmaJI	CCTAGG	1 cut(s)	1517
XmiI	GTMKAC	1 cut(s)	765
XspI	CTAG	8 cut(s)	27, 74, 198, 896, 1392, 1419, 1518, 1598
Zsp2I	ATGCAT	1 cut(s)	1629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.