Prupe.6G089300_v2.0.a1

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000610
Physical Location & Seq
Forward (+)
6105522 .. 6108709
3188 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G089300.1

Sequence Viewer

Length: 1746 bp
ATGGGTGTTCCTCTTATTTCATCACCGCCATTTCTTACCCTCTTTCTCTTCTCTTTCATGACATTGTGTCTCAGTCCTCAGCATGCTCTTGCAAGCATAACAAGGCACTACAAGTTTGATATCAAACTGCAAAACGTGACAAGGTTATGCCAGACAAAGAGCATTGTAACAGTAAACGGACAGTTTCCTGGGCCTCGAATTGTTGCTAGGGAGGGTGACCAACTCCTTATTAAAGTGATTAACCATGTCCAAAACAACATCTCTGTTCATTGGCACGGCATTCGACAGCTTCGAACAGGGTGGGCTGATGGGCCTGCATATGTGACCCAATGTCCCATACAAACAGGCCACAGCTATGTGTACAACTTCACCATTGTAGGCCAAAGAGGCACTCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACTGTTTATGGTCCCCTAATCATCCTTCCCAAGCTTGGAGTGCCTTACCCATTCACTAAACCCTATAAGGCGGTGCCGATAATTTTCGGAGAGTGGTGGAATGCAGATCCTGAGGCAGTTATTAGCCAGGCCTTGCAAACAGGTGGAGGCCCAAATGTCTCTGATGCTTATACCCTTAATGGTCTCCCAGGGCCCTTGTACAACTGCTCTGCCAAAGATGCATTCAAACTAAAGGTTGAAGCTGGGAAGACATACCTTCTGCGCCTGATCAACGCAGCACTGAATGATGAGCTATTCTTCAGCATTGCAAATCACACCCTCAAAGTGGTAGAAGCTGATGCCGTCTATGTCAAACCCTTTGAGACCCACACAATTCTCATTGCCCCTGGACAAACCACAAATGTTCTTCTCAAAACCAAACCCAGCTTCCCAAATGCCACATTTTTCTTGACTGCTAGGCCATATGTGACTGGTCTAGGTACATTTGACAACTCCACAGTTGCTGGCATTTTAGTGTATGAATTCCCACCCAACACCAAAACCCTAAAAATGAAGAAACTTCCACTCTTCAAACCCAATCTCCCGGCCTTAAACGACACATCATTCGCAACAAAATTCAATGACAAACTCCGCAGCTTGAACAATGCACGATTCCCAGCTAATGTACCACAGAAAGTTGACAAACATTTTTTCTTCACCGTAGGCCTTGGAACCAACCCTTGTAGCCAACATAACCGAACATGCCAAGGACCCAATGGGACAATGTTTGCAGCTTCAATTAACAACATTTCTTTTGCCATGCCAAACACTGCCTTACTCCAATCCCACTTTTCTAGCCAATCAAATGGGGTTTATACTCCTGACTTCCCAACCAATCCTATAATCCCATTTAACTACACAGGGGCCCCACCAAATGATACTATGGTAAGCAATGGGACAAAGCTGGTGGTGCTTCAATTTAACACCAGTGTGGAGTTGGTGATGCAGGACACTAGCATTCTTGGTGCTGAGAGCCATCCTCTGCATCTTCATGGGTTTAATTTCTTTGTTGTGGGTCAAGGATTTGGGAACTTTGACAGAAATAAGGACCCTGCAAAGTTCAATCTGGTTGACCCTGTTGAGAGGAACACTGTGGGTGTGCCCTCTGGTGGATGGGTTGCTATTCGGTTTTTAGCAGATAACCCAGGTGTGTGGTTTATGCATTGCCACCTGGAGATCCACACAAGCTGGGGATTGAAGATGGCTTGGGTAGTCTTAGATGGAAAGCTTCCCAATCAAAAGTTGCTTCCTCCACCTGCTGATCTTCCCAAATGTTGA

Protein Analysis

582

Amino Acids

64.28

Weight (kDa)

9.3

Isoelectric Point (pI)

29.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000610)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60020 AT5G60020 AT5G60020
fragaria_vesca FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1732
Acc36I ACCTGC 1 cut(s) 1732
AccB1I GGYRCC 1 cut(s) 502
AciI CCGC 3 cut(s) 26, 500, 1060
AclWI GGATC 2 cut(s) 530, 1639
AcsI RAATTY 2 cut(s) 950, 1043
AcuI CTGAAG 1 cut(s) 712
AfaI GTAC 4 cut(s) 362, 629, 910, 1095
AfiI CCNNNNNNNGG 3 cut(s) 464, 754, 1577
AgsI TTSAA 9 cut(s) 655, 668, 1000, 1048, 1069, 1206, 1385, 1531, 1666
AhdI GACNNNNNGTC 2 cut(s) 66, 330
AjnI CCWGG 6 cut(s) 187, 555, 616, 814, 1612, 1638
AjuI GAANNNNNNNTTGG 4 cut(s) 635, 667, 839, 871
AleI CACNNNNGTG 1 cut(s) 1397
Alw26I GTCTC 4 cut(s) 74, 592, 617, 785
AlwI GGATC 2 cut(s) 530, 1639
AlwNI CAGNNNCTG 2 cut(s) 539, 932
ApaI GGGCCC 2 cut(s) 624, 1336
ApeKI GCWGC 3 cut(s) 704, 1062, 1199
ApoI RAATTY 2 cut(s) 950, 1043
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
AspLEI GCGC 1 cut(s) 693
AsuC2I CCSGG 1 cut(s) 1013
AsuHPI GGTGA 5 cut(s) 15, 227, 361, 1117, 1420
AsuII TTCGAA 1 cut(s) 292
AvaII GGWCC 3 cut(s) 440, 1178, 1516
AxyI CCTNAGG 1 cut(s) 540
BaeGI GKGCMC 3 cut(s) 624, 1336, 1572
BaeI ACNNNNGTAYC 2 cut(s) 1338, 1371
BanI GGYRCC 1 cut(s) 502
BanII GRGCYC 2 cut(s) 624, 1336
BbsI GAAGAC 1 cut(s) 683
BbvCI CCTCAGC 1 cut(s) 78
BbvI GCAGC 3 cut(s) 716, 1074, 1211
BccI CCATC 5 cut(s) 302, 1452, 1575, 1663, 1682
BceAI ACGGC 2 cut(s) 292, 755
BcgI CGANNNNNNTGC 2 cut(s) 263, 297
BciT130I CCWGG 6 cut(s) 189, 557, 618, 816, 1614, 1640
BclI TGATCA 1 cut(s) 696
BcnI CCSGG 1 cut(s) 1013
BcoDI GTCTC 4 cut(s) 74, 592, 617, 785
BfaI CTAG 5 cut(s) 207, 885, 905, 1263, 1422
BfuAI ACCTGC 1 cut(s) 1732
BglI GCCNNNNNGGC 1 cut(s) 387
BisI GCNGC 3 cut(s) 705, 1063, 1200
BlsI GCNGC 3 cut(s) 706, 1064, 1201
Bme1390I CCNGG 7 cut(s) 189, 557, 618, 816, 1013, 1614, 1640
Bme18I GGWCC 3 cut(s) 440, 1178, 1516
BmeRI GACNNNNNGTC 2 cut(s) 66, 330
BmiI GGNNCC 9 cut(s) 442, 504, 622, 1141, 1180, 1333, 1334, 1335, 1518
BmrFI CCNGG 7 cut(s) 189, 557, 618, 816, 1013, 1614, 1640
BmsI GCATC 5 cut(s) 583, 637, 757, 1401, 1462
BpiI GAAGAC 1 cut(s) 683
BplI GAGNNNNNCTC 2 cut(s) 1432, 1464
BpmI CTGGAG 1 cut(s) 1661
Bpu10I CCTNAGC 1 cut(s) 78
Bpu14I TTCGAA 1 cut(s) 292
BpuMI CCSGG 1 cut(s) 1013
BsaI GGTCTC 2 cut(s) 617, 785
BsaJI CCNNGG 7 cut(s) 188, 616, 617, 814, 1135, 1174, 1612
BsaXI ACNNNNNCTCC 2 cut(s) 993, 1023
Bsc4I CCNNNNNNNGG 3 cut(s) 464, 754, 1577
Bse1I ACTGG 2 cut(s) 904, 1395
Bse21I CCTNAGG 1 cut(s) 540
Bse3DI GCAATG 4 cut(s) 732, 807, 1366, 1630
BseBI CCWGG 6 cut(s) 189, 557, 618, 816, 1614, 1640
BseDI CCNNGG 7 cut(s) 188, 616, 617, 814, 1135, 1174, 1612
BseGI GGATG 3 cut(s) 450, 1444, 1586
BseLI CCNNNNNNNGG 3 cut(s) 464, 754, 1577
BseMI GCAATG 4 cut(s) 732, 807, 1366, 1630
BseMII CTCAG 4 cut(s) 85, 92, 531, 1428
BseNI ACTGG 2 cut(s) 904, 1395
BseSI GKGCMC 3 cut(s) 624, 1336, 1572
BseXI GCAGC 3 cut(s) 716, 1074, 1211
BseYI CCCAGC 4 cut(s) 671, 851, 1084, 1656
BshNI GGYRCC 1 cut(s) 502
BsiSI CCGG 1 cut(s) 1013
BslFI GGGAC 4 cut(s) 318, 426, 1201, 1378
BslI CCNNNNNNNGG 3 cut(s) 464, 754, 1577
BsmAI GTCTC 4 cut(s) 74, 592, 617, 785
BsmFI GGGAC 4 cut(s) 318, 426, 1201, 1378
BsmI GAATGC 4 cut(s) 279, 535, 650, 1425
Bso31I GGTCTC 2 cut(s) 617, 785
Bsp119I TTCGAA 1 cut(s) 292
Bsp120I GGGCCC 2 cut(s) 620, 1332
Bsp1286I GDGCHC 3 cut(s) 624, 1336, 1572
Bsp1407I TGTACA 2 cut(s) 360, 627
Bsp143I GATC 5 cut(s) 425, 535, 696, 1644, 1729
BspACI CCGC 3 cut(s) 26, 500, 1060
BspCNI CTCAG 4 cut(s) 84, 91, 532, 1429
BspHI TCATGA 1 cut(s) 57
BspLI GGNNCC 9 cut(s) 442, 504, 622, 1141, 1180, 1333, 1334, 1335, 1518
BspMI ACCTGC 1 cut(s) 1732
BspPI GGATC 2 cut(s) 530, 1639
BspT104I TTCGAA 1 cut(s) 292
BspT107I GGYRCC 1 cut(s) 502
BspTNI GGTCTC 2 cut(s) 617, 785
BsrDI GCAATG 4 cut(s) 732, 807, 1366, 1630
BsrGI TGTACA 2 cut(s) 360, 627
BsrI ACTGG 2 cut(s) 904, 1395
BssECI CCNNGG 7 cut(s) 188, 616, 617, 814, 1135, 1174, 1612
BssMI GATC 5 cut(s) 425, 535, 696, 1644, 1729
BssT1I CCWWGG 2 cut(s) 1135, 1174
Bst2UI CCWGG 6 cut(s) 189, 557, 618, 816, 1614, 1640
Bst4CI ACNGT 6 cut(s) 172, 183, 433, 928, 1129, 1561
Bst6I CTCTTC 2 cut(s) 53, 1001
BstAUI TGTACA 2 cut(s) 360, 627
BstBI TTCGAA 1 cut(s) 292
BstC8I GCNNGC 5 cut(s) 84, 94, 315, 405, 934
BstDEI CTNAG 6 cut(s) 71, 78, 422, 540, 1437, 1684
BstEII GGTNACC 1 cut(s) 215
BstF5I GGATG 3 cut(s) 450, 1444, 1586
BstHHI GCGC 1 cut(s) 693
BstKTI GATC 5 cut(s) 428, 538, 699, 1647, 1732
BstMAI GTCTC 4 cut(s) 74, 592, 617, 785
BstMBI GATC 5 cut(s) 425, 535, 696, 1644, 1729
BstMWI GCNNNNNNNGC 4 cut(s) 387, 469, 647, 1378
BstNI CCWGG 6 cut(s) 189, 557, 618, 816, 1614, 1640
BstNSI RCATGY 3 cut(s) 86, 407, 1173
BstPI GGTNACC 1 cut(s) 215
BstSCI CCNGG 7 cut(s) 187, 555, 616, 814, 1011, 1612, 1638
BstSLI GKGCMC 3 cut(s) 624, 1336, 1572
BstV1I GCAGC 3 cut(s) 716, 1074, 1211
BstV2I GAAGAC 1 cut(s) 683
BstX2I RGATCY 2 cut(s) 535, 1644
BstXI CCANNNNNNTGG 2 cut(s) 1274, 1620
BstYI RGATCY 2 cut(s) 535, 1644
Bsu36I CCTNAGG 1 cut(s) 540
BtsCI GGATG 3 cut(s) 450, 1444, 1586
BtsI GCAGTG 1 cut(s) 1236
BtsIMutI CAGTG 4 cut(s) 707, 1236, 1402, 1557
BveI ACCTGC 1 cut(s) 1732
Cac8I GCNNGC 5 cut(s) 84, 94, 315, 405, 934
CaiI CAGNNNCTG 2 cut(s) 539, 932
CciI TCATGA 1 cut(s) 57
CfoI GCGC 1 cut(s) 693
Csp6I GTAC 4 cut(s) 361, 628, 909, 1094
CspCI CAANNNNNGTGG 2 cut(s) 1356, 1391
CviAII CATG 8 cut(s) 58, 83, 245, 404, 417, 1170, 1228, 1460
CviQI GTAC 4 cut(s) 361, 628, 909, 1094
DdeI CTNAG 6 cut(s) 71, 78, 422, 540, 1437, 1684
DpnI GATC 5 cut(s) 427, 537, 698, 1646, 1731
DpnII GATC 5 cut(s) 425, 535, 696, 1644, 1729
DriI GACNNNNNGTC 2 cut(s) 66, 330
Eam1104I CTCTTC 2 cut(s) 53, 1001
Eam1105I GACNNNNNGTC 2 cut(s) 66, 330
EarI CTCTTC 2 cut(s) 53, 1001
Eco130I CCWWGG 2 cut(s) 1135, 1174
Eco147I AGGCCT 2 cut(s) 560, 1134
Eco24I GRGCYC 2 cut(s) 624, 1336
Eco31I GGTCTC 2 cut(s) 617, 785
Eco32I GATATC 1 cut(s) 121
Eco47I GGWCC 3 cut(s) 440, 1178, 1516
Eco57I CTGAAG 1 cut(s) 712
Eco81I CCTNAGG 1 cut(s) 540
Eco91I GGTNACC 1 cut(s) 215
EcoO109I RGGNCCY 6 cut(s) 620, 621, 1178, 1332, 1333, 1516
EcoO65I GGTNACC 1 cut(s) 215
EcoRI GAATTC 1 cut(s) 950
EcoRII CCWGG 6 cut(s) 187, 555, 616, 814, 1612, 1638
EcoRV GATATC 1 cut(s) 121
EcoT14I CCWWGG 2 cut(s) 1135, 1174
EcoT22I ATGCAT 2 cut(s) 652, 1632
EcoT38I GRGCYC 2 cut(s) 624, 1336
ErhI CCWWGG 2 cut(s) 1135, 1174
FaeI CATG 8 cut(s) 61, 86, 248, 407, 420, 1173, 1231, 1463
FaqI GGGAC 4 cut(s) 318, 426, 1201, 1378
FatI CATG 8 cut(s) 57, 82, 244, 403, 416, 1169, 1227, 1459
FauNDI CATATG 2 cut(s) 319, 892
FbaI TGATCA 1 cut(s) 696
Fnu4HI GCNGC 3 cut(s) 705, 1063, 1200
FokI GGATG 3 cut(s) 437, 1431, 1593
FriOI GRGCYC 2 cut(s) 624, 1336
Fsp4HI GCNGC 3 cut(s) 705, 1063, 1200
FspBI CTAG 5 cut(s) 207, 885, 905, 1263, 1422
GlaI GCGC 1 cut(s) 692
GluI GCNGC 3 cut(s) 705, 1063, 1200
GsaI CCCAGC 4 cut(s) 675, 855, 1088, 1660
GsuI CTGGAG 1 cut(s) 1661
HapII CCGG 1 cut(s) 1013
HhaI GCGC 1 cut(s) 693
Hin1II CATG 8 cut(s) 61, 86, 248, 407, 420, 1173, 1231, 1463
Hin6I GCGC 1 cut(s) 691
HinP1I GCGC 1 cut(s) 691
HincII GTYRAC 2 cut(s) 1108, 1540
HindII GTYRAC 2 cut(s) 1108, 1540
HindIII AAGCTT 2 cut(s) 461, 1694
HinfI GANTC 1 cut(s) 1080
HpaII CCGG 1 cut(s) 1013
HphI GGTGA 5 cut(s) 15, 227, 361, 1117, 1420
Hpy166II GTNNAC 4 cut(s) 175, 361, 1108, 1540
Hpy188I TCNGA 2 cut(s) 518, 592
Hpy188III TCNNGA 4 cut(s) 58, 539, 877, 1289
Hpy8I GTNNAC 4 cut(s) 175, 361, 1108, 1540
HpyAV CCTTC 2 cut(s) 464, 695
HpyCH4III ACNGT 6 cut(s) 172, 183, 433, 928, 1129, 1561
HpyCH4IV ACGT 1 cut(s) 135
HpyF10VI GCNNNNNNNGC 4 cut(s) 387, 469, 647, 1378
HpyF3I CTNAG 6 cut(s) 71, 78, 422, 540, 1437, 1684
HpySE526I ACGT 1 cut(s) 135
Hsp92II CATG 8 cut(s) 61, 86, 248, 407, 420, 1173, 1231, 1463
HspAI GCGC 1 cut(s) 691
Ksp22I TGATCA 1 cut(s) 696
Kzo9I GATC 5 cut(s) 425, 535, 696, 1644, 1729
Lsp1109I GCAGC 3 cut(s) 716, 1074, 1211
LweI GCATC 5 cut(s) 583, 637, 757, 1401, 1462
MaeI CTAG 5 cut(s) 207, 885, 905, 1263, 1422
MaeII ACGT 1 cut(s) 135
MaeIII GTNAC 5 cut(s) 136, 166, 215, 322, 895
MalI GATC 5 cut(s) 427, 537, 698, 1646, 1731
MboI GATC 5 cut(s) 425, 535, 696, 1644, 1729
MflI RGATCY 2 cut(s) 535, 1644
MhlI GDGCHC 3 cut(s) 624, 1336, 1572
MluCI AATT 8 cut(s) 198, 510, 801, 950, 1043, 1206, 1385, 1468
Mph1103I ATGCAT 2 cut(s) 652, 1632
MseI TTAA 8 cut(s) 231, 240, 606, 1019, 1209, 1320, 1389, 1467
MslI CAYNNNNRTG 4 cut(s) 354, 941, 1397, 1458
MspI CCGG 1 cut(s) 1013
MspR9I CCNGG 7 cut(s) 189, 557, 618, 816, 1013, 1614, 1640
Mva1269I GAATGC 4 cut(s) 279, 535, 650, 1425
MvaI CCWGG 6 cut(s) 189, 557, 618, 816, 1614, 1640
MwoI GCNNNNNNNGC 4 cut(s) 387, 469, 647, 1378
NciI CCSGG 1 cut(s) 1013
NdeI CATATG 2 cut(s) 319, 892
NdeII GATC 5 cut(s) 425, 535, 696, 1644, 1729
NlaIII CATG 8 cut(s) 61, 86, 248, 407, 420, 1173, 1231, 1463
NlaIV GGNNCC 9 cut(s) 442, 504, 622, 1141, 1180, 1333, 1334, 1335, 1518
NmuCI GTSAC 4 cut(s) 136, 215, 322, 895
NsiI ATGCAT 2 cut(s) 652, 1632
NspI RCATGY 3 cut(s) 86, 407, 1173
NspV TTCGAA 1 cut(s) 292
OliI CACNNNNGTG 1 cut(s) 1397
PaeI GCATGC 2 cut(s) 86, 407
PagI TCATGA 1 cut(s) 57
PaqCI CACCTGC 1 cut(s) 1732
PasI CCCWGGG 1 cut(s) 617
PceI AGGCCT 2 cut(s) 560, 1134
PcsI WCGNNNNNNNCGW 1 cut(s) 289
PctI GAATGC 4 cut(s) 279, 535, 650, 1425
PfeI GAWTC 1 cut(s) 1080
PkrI GCNGC 3 cut(s) 706, 1064, 1201
PpuMI RGGWCCY 2 cut(s) 1178, 1516
Psp5II RGGWCCY 2 cut(s) 1178, 1516
Psp6I CCWGG 6 cut(s) 187, 555, 616, 814, 1612, 1638
PspEI GGTNACC 1 cut(s) 215
PspFI CCCAGC 4 cut(s) 671, 851, 1084, 1656
PspGI CCWGG 6 cut(s) 187, 555, 616, 814, 1612, 1638
PspN4I GGNNCC 9 cut(s) 442, 504, 622, 1141, 1180, 1333, 1334, 1335, 1518
PspOMI GGGCCC 2 cut(s) 620, 1332
PspPPI RGGWCCY 2 cut(s) 1178, 1516
PstNI CAGNNNCTG 2 cut(s) 539, 932
PsuI RGATCY 2 cut(s) 535, 1644
RsaI GTAC 4 cut(s) 362, 629, 910, 1095
RsaNI GTAC 4 cut(s) 361, 628, 909, 1094
RseI CAYNNNNRTG 4 cut(s) 354, 941, 1397, 1458
SaqAI TTAA 8 cut(s) 231, 240, 606, 1019, 1209, 1320, 1389, 1467
SatI GCNGC 3 cut(s) 705, 1063, 1200
Sau3AI GATC 5 cut(s) 425, 535, 696, 1644, 1729
ScrFI CCNGG 7 cut(s) 189, 557, 618, 816, 1013, 1614, 1640
SduI GDGCHC 3 cut(s) 624, 1336, 1572
SfaNI GCATC 5 cut(s) 583, 637, 757, 1401, 1462
SfuI TTCGAA 1 cut(s) 292
SinI GGWCC 3 cut(s) 440, 1178, 1516
SmiMI CAYNNNNRTG 4 cut(s) 354, 941, 1397, 1458
SphI GCATGC 2 cut(s) 86, 407
Sse9I AATT 8 cut(s) 198, 510, 801, 950, 1043, 1206, 1385, 1468
SseBI AGGCCT 2 cut(s) 560, 1134
SsiI CCGC 3 cut(s) 26, 500, 1060
SspMI CTAG 5 cut(s) 207, 885, 905, 1263, 1422
StuI AGGCCT 2 cut(s) 560, 1134
StyD4I CCNGG 7 cut(s) 187, 555, 616, 814, 1011, 1612, 1638
StyI CCWWGG 2 cut(s) 1135, 1174
TaaI ACNGT 6 cut(s) 172, 183, 433, 928, 1129, 1561
TaiI ACGT 1 cut(s) 138
TaqI TCGA 3 cut(s) 196, 283, 292
TasI AATT 8 cut(s) 198, 510, 801, 950, 1043, 1206, 1385, 1468
TatI WGTACW 2 cut(s) 360, 627
TfiI GAWTC 1 cut(s) 1080
Tru1I TTAA 8 cut(s) 231, 240, 606, 1019, 1209, 1320, 1389, 1467
Tru9I TTAA 8 cut(s) 231, 240, 606, 1019, 1209, 1320, 1389, 1467
TscAI CASTG 4 cut(s) 714, 1243, 1402, 1564
TseFI GTSAC 4 cut(s) 136, 215, 322, 895
TseI GCWGC 3 cut(s) 704, 1062, 1199
Tsp45I GTSAC 4 cut(s) 136, 215, 322, 895
TspDTI ATGAA 7 cut(s) 9, 46, 257, 405, 963, 995, 1448
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 4 cut(s) 714, 1243, 1402, 1564
VpaK11BI GGWCC 3 cut(s) 440, 1178, 1516
XapI RAATTY 2 cut(s) 950, 1043
XceI RCATGY 3 cut(s) 86, 407, 1173
XcmI CCANNNNNNNNNTGG 2 cut(s) 1181, 1402
XspI CTAG 5 cut(s) 207, 885, 905, 1263, 1422
Zsp2I ATGCAT 2 cut(s) 652, 1632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.