Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000610

Physical Location & Seq

Genomic Coordinates Reverse (-)

67540144 .. 67543397

Gene Structure 3254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G038290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGGTGTTGCTCTTCTTTCACTTGTTAGGCATTTTGTTCTCTTTTTCATCACATTGGGTCTCATTCCTCATCAGCAAACTCTTGCAAGCATAACAAGGCACTACAAATTTGATATCCAACTGCAAAATGTGACAAGGCTGTGCCACACCAAGAGCATTGTAACCGTAAACGGACAATTTCCTGGGCCTCGAATTGTTGCTAGGGAGGGTGATCACCTCCTCATTAAAGTGGTTAACCATGTTCAAAGCAATATCTCCATCCATTGGCATGGGATTCGACAGCTTCAAACCGGGTGGGCTGATGGTCCGGCATACATTACTCAATGCCCGATACAAACCGGCAACAACTATGTGTATAACTTTACCATTATAGGCCAAAGAGGCACGCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACCATCTATGGCCCCTTAATCATTCTTCCCAAGCGTGGTGTTCCTTATCCATTTACCAAACCCTACAAGGAAGTTCCCATCATCTTTGGAGAATGGTGGAATGTGGATCCTGAAGCAGTCATAAACCAGGCCCTGCAGACTGGGGGAGGACCAAATGTTTCTGATGCTTATACCATTAATGGCCTCCCAGGACCTTTGTATAACTGCTCTGCCAAAGATACATTCAAGCTTAAGGTTCAAGCTGGGAAGACATACCTTCTGCGCTTGATCAATGCAGCACTGAACGACGAACTTTTCTTCAGCATTGCAAATCATACCCTCAAAGTAGTCGAAACAGACGCTGTTTATGTTAAGCCCTTTGACACCAACACCATTCTCATTGCCCCGGGACAAACCACAAATGTTCTTCTCAAAACCAAGCCTAACTTCCCAAATGCCACATTTCTCATGACCGCAAGGCCATACGTGACTGGTCTAGGCACCTTTGACAACTCCACTGTTGCTGCCATTCTAGAGTACGAAACGACTACGCTTCACTCAATCCTCCCATTGAACAAACTTCCGCTCCACAAACCAATTCTCCCGGCTCTAAATGACACATCGTTTGCAACAAAGTTCGCCAGCAAACTCCGCAGCTTAAACACTCCAGAGTTCCCAGCGAACGTCCCGCAGAAAGTTGACAAGCGTTTGTTCTTCACAATAGGACTTGGAACCAACCCATGTAGCCAGCAGCAGCACAACAACCAAACCTGCCAAGGACCCAATGGAACCATGTTTGCTGCTTCAATCAACAACGTTTCTTTTACAATGCCAAACACTGCCTTACTCCAATCCCACTTTTCTGGCCAATCAAAGGGAGTTTATTCCCCTGACTTTCCGATCAGCCCTTCAATTCCATTTAATTACACAGGGGCCCAGCTGAACAATACTAATGTGAGCAATGGTACAAAACTTATGATGCTTCCGTTTAACACTAGTGTGGAGTTGGTGCTGCAAGACACTAGTATTCTTGGTGCTGAAAGCCATCCTCTTCATCTTCATGGATTCAACTTCTTTGTTGTTGGTCAAGGGTTTGGCAACTTTGACCAGAATTATGACCCTAGGAAGTTCAATCTGGTTGACCCCGTTGAAAGAAACACGGTGAGTGTGCCCTCTGGTGGGTGGGTTGCCATTCGGTTTCTAGCAGATAACCCAGGTGTCTGGTTCATGCATTGCCATTTGGAAATCCACACTAGCTGGGGCTTGAAGATGGCTTGGGTAGTCTTAGATGGAGAGCTTCCCAATCAAAAGTTGCTTCCTCCACCACTGGATCTTCCTAAATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

582

Amino Acids

64.68

Weight (kDa)

8.97

Isoelectric Point (pI)

31.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	39 - 152	1.5e-41	Multicopper oxidase
Cu-oxidase	PF00394	165 - 315	6e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	433 - 564	3.3e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60020 AT5G60020 AT5G60020
fragaria_vesca	FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica	MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica	Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis	pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis	RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata	RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora	Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii	Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa	Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha	Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana	Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1181
AccB1I	GGYRCC	1 cut(s)	902
AccB7I	CCANNNNNTGG	1 cut(s)	264
AccBSI	CCGCTC	1 cut(s)	988
AciI	CCGC	4 cut(s)	876, 986, 1054, 1091
AclI	AACGTT	1 cut(s)	1218
AclWI	GGATC	3 cut(s)	524, 537, 1740
AcoI	YGGCCR	1 cut(s)	1267
AcsI	RAATTY	1 cut(s)	107
AcuI	CTGAAG	2 cut(s)	555, 706
AfaI	GTAC	2 cut(s)	941, 1369
AfiI	CCNNNNNNNGG	5 cut(s)	264, 458, 1276, 1580, 1581
AflII	CTTAAG	1 cut(s)	653
AhlI	ACTAGT	2 cut(s)	1397, 1424
AjnI	CCWGG	4 cut(s)	181, 549, 610, 1615
AjuI	GAANNNNNNNTTGG	4 cut(s)	629, 661, 833, 865
AleI	CACNNNNGTG	1 cut(s)	1400
AluBI	AGCT	7 cut(s)	283, 652, 665, 1059, 1342, 1659, 1699
AluI	AGCT	7 cut(s)	283, 652, 665, 1059, 1342, 1659, 1699
Alw26I	GTCTC	1 cut(s)	65
AlwI	GGATC	3 cut(s)	524, 537, 1740
AlwNI	CAGNNNCTG	2 cut(s)	556, 764
Ama87I	CYCGRG	1 cut(s)	808
AoxI	GGCC	8 cut(s)	185, 373, 433, 552, 604, 881, 1267, 1335
ApaI	GGGCCC	1 cut(s)	1339
ApeKI	GCWGC	7 cut(s)	698, 926, 1056, 1153, 1156, 1202, 1414
ApoI	RAATTY	1 cut(s)	107
ArsI	GACNNNNNNTTYG	2 cut(s)	1010, 1042
AseI	ATTAAT	1 cut(s)	600
AspA2I	CCTAGG	1 cut(s)	1523
AspLEI	GCGC	1 cut(s)	687
AspS9I	GGNCC	9 cut(s)	185, 305, 434, 553, 572, 614, 1181, 1335, 1336
AsuC2I	CCSGG	4 cut(s)	292, 809, 810, 1007
AsuHPI	GGTGA	3 cut(s)	206, 221, 1576
AvaI	CYCGRG	1 cut(s)	808
AvaII	GGWCC	4 cut(s)	305, 572, 614, 1181
AvrII	CCTAGG	1 cut(s)	1523
BaeGI	GKGCMC	2 cut(s)	1339, 1575
BalI	TGGCCA	1 cut(s)	1269
BamHI	GGATCC	1 cut(s)	529
BanI	GGYRCC	1 cut(s)	902
BanII	GRGCYC	1 cut(s)	1339
BbsI	GAAGAC	1 cut(s)	677
BbvI	GCAGC	7 cut(s)	710, 913, 1068, 1165, 1168, 1189, 1401
BccI	CCATC	7 cut(s)	266, 296, 434, 509, 1455, 1666, 1685
BcgI	CGANNNNNNTGC	2 cut(s)	257, 291
BciT130I	CCWGG	4 cut(s)	183, 551, 612, 1617
BclI	TGATCA	2 cut(s)	211, 690
BcnI	CCSGG	4 cut(s)	292, 809, 810, 1007
BcoDI	GTCTC	1 cut(s)	65
BcuI	ACTAGT	2 cut(s)	1397, 1424
BfaI	CTAG	8 cut(s)	201, 899, 935, 1398, 1425, 1524, 1604, 1656
BfmI	CTRYAG	1 cut(s)	557
BfrI	CTTAAG	1 cut(s)	653
BfuAI	ACCTGC	1 cut(s)	1181
BglI	GCCNNNNNGGC	1 cut(s)	381
BisI	GCNGC	7 cut(s)	699, 927, 1057, 1154, 1157, 1203, 1415
BlnI	CCTAGG	1 cut(s)	1523
BlsI	GCNGC	7 cut(s)	700, 928, 1058, 1155, 1158, 1204, 1416
Bme1390I	CCNGG	8 cut(s)	183, 292, 551, 612, 809, 810, 1007, 1617
Bme18I	GGWCC	4 cut(s)	305, 572, 614, 1181
BmeT110I	CYCGRG	1 cut(s)	808
BmgT120I	GGNCC	9 cut(s)	185, 305, 434, 553, 572, 614, 1181, 1335, 1336
BmiI	GGNNCC	8 cut(s)	436, 531, 904, 1135, 1183, 1192, 1336, 1337
BmrFI	CCNGG	8 cut(s)	183, 292, 551, 612, 809, 810, 1007, 1617
BmrI	ACTGGG	1 cut(s)	573
BmsI	GCATC	2 cut(s)	577, 1371
BmuI	ACTGGG	1 cut(s)	573
BpiI	GAAGAC	1 cut(s)	677
BpmI	CTGGAG	1 cut(s)	1053
BpuMI	CCSGG	4 cut(s)	292, 809, 810, 1007
BsaAI	YACGTR	1 cut(s)	889
BsaI	GGTCTC	1 cut(s)	65
BsaJI	CCNNGG	7 cut(s)	182, 610, 807, 808, 1177, 1523, 1615
BsaXI	ACNNNNNCTCC	4 cut(s)	972, 987, 1002, 1017
Bsc4I	CCNNNNNNNGG	5 cut(s)	264, 458, 1276, 1580, 1581
Bse118I	RCCGGY	1 cut(s)	338
Bse1I	ACTGG	3 cut(s)	568, 898, 1734
Bse3DI	GCAATG	4 cut(s)	726, 801, 1369, 1633
BseBI	CCWGG	4 cut(s)	183, 551, 612, 1617
BseDI	CCNNGG	7 cut(s)	182, 610, 807, 808, 1177, 1523, 1615
BseGI	GGATG	2 cut(s)	258, 1447
BseLI	CCNNNNNNNGG	5 cut(s)	264, 458, 1276, 1580, 1581
BseMI	GCAATG	4 cut(s)	726, 801, 1369, 1633
BseNI	ACTGG	3 cut(s)	568, 898, 1734
BseRI	GAGGAG	1 cut(s)	209
BseSI	GKGCMC	2 cut(s)	1339, 1575
BseXI	GCAGC	7 cut(s)	710, 913, 1068, 1165, 1168, 1189, 1401
BseYI	CCCAGC	4 cut(s)	665, 1078, 1338, 1659
BshFI	GGCC	8 cut(s)	187, 375, 435, 554, 606, 883, 1269, 1337
BshNI	GGYRCC	1 cut(s)	902
BsiHKCI	CYCGRG	1 cut(s)	808
BsiSI	CCGG	5 cut(s)	291, 308, 339, 809, 1007
BslFI	GGGAC	2 cut(s)	825, 1073
BslI	CCNNNNNNNGG	5 cut(s)	264, 458, 1276, 1580, 1581
BsmAI	GTCTC	1 cut(s)	65
BsmFI	GGGAC	2 cut(s)	825, 1073
BsnI	GGCC	8 cut(s)	187, 375, 435, 554, 606, 883, 1269, 1337
Bso31I	GGTCTC	1 cut(s)	65
BsoBI	CYCGRG	1 cut(s)	808
Bsp120I	GGGCCC	1 cut(s)	1335
Bsp1286I	GDGCHC	2 cut(s)	1339, 1575
Bsp143I	GATC	6 cut(s)	211, 419, 529, 690, 1302, 1732
BspACI	CCGC	4 cut(s)	876, 986, 1054, 1091
BspANI	GGCC	8 cut(s)	187, 375, 435, 554, 606, 883, 1269, 1337
BspHI	TCATGA	1 cut(s)	870
BspLI	GGNNCC	8 cut(s)	436, 531, 904, 1135, 1183, 1192, 1336, 1337
BspMAI	CTGCAG	1 cut(s)	561
BspMI	ACCTGC	1 cut(s)	1181
BspPI	GGATC	3 cut(s)	524, 537, 1740
BspQI	GCTCTTC	1 cut(s)	18
BspT107I	GGYRCC	1 cut(s)	902
BspTI	CTTAAG	1 cut(s)	653
BspTNI	GGTCTC	1 cut(s)	65
BsrBI	CCGCTC	1 cut(s)	988
BsrDI	GCAATG	4 cut(s)	726, 801, 1369, 1633
BsrFI	RCCGGY	1 cut(s)	338
BsrI	ACTGG	3 cut(s)	568, 898, 1734
BssAI	RCCGGY	1 cut(s)	338
BssECI	CCNNGG	7 cut(s)	182, 610, 807, 808, 1177, 1523, 1615
BssMI	GATC	6 cut(s)	211, 419, 529, 690, 1302, 1732
BssT1I	CCWWGG	2 cut(s)	1177, 1523
Bst2UI	CCWGG	4 cut(s)	183, 551, 612, 1617
Bst4CI	ACNGT	3 cut(s)	166, 922, 1564
Bst6I	CTCTTC	2 cut(s)	18, 1458
BstAFI	CTTAAG	1 cut(s)	653
BstBAI	YACGTR	1 cut(s)	889
BstC8I	GCNNGC	5 cut(s)	88, 386, 399, 1045, 1151
BstDEI	CTNAG	2 cut(s)	416, 1687
BstF5I	GGATG	2 cut(s)	258, 1447
BstHHI	GCGC	1 cut(s)	687
BstKTI	GATC	6 cut(s)	214, 422, 532, 693, 1305, 1735
BstMAI	GTCTC	1 cut(s)	65
BstMBI	GATC	6 cut(s)	211, 419, 529, 690, 1302, 1732
BstMWI	GCNNNNNNNGC	3 cut(s)	381, 394, 1053
BstNI	CCWGG	4 cut(s)	183, 551, 612, 1617
BstNSI	RCATGY	1 cut(s)	401
BstSCI	CCNGG	8 cut(s)	181, 290, 549, 610, 807, 808, 1005, 1615
BstSFI	CTRYAG	1 cut(s)	557
BstSLI	GKGCMC	2 cut(s)	1339, 1575
BstV1I	GCAGC	7 cut(s)	710, 913, 1068, 1165, 1168, 1189, 1401
BstV2I	GAAGAC	1 cut(s)	677
BstX2I	RGATCY	2 cut(s)	529, 1732
BstXI	CCANNNNNNTGG	3 cut(s)	269, 1265, 1623
BstYI	RGATCY	2 cut(s)	529, 1732
BsuRI	GGCC	8 cut(s)	187, 375, 435, 554, 606, 883, 1269, 1337
BtsCI	GGATG	2 cut(s)	258, 1447
BtsI	GCAGTG	1 cut(s)	1239
BtsIMutI	CAGTG	4 cut(s)	701, 918, 1239, 1727
BveI	ACCTGC	1 cut(s)	1181
Cac8I	GCNNGC	5 cut(s)	88, 386, 399, 1045, 1151
CaiI	CAGNNNCTG	2 cut(s)	556, 764
CciI	TCATGA	1 cut(s)	870
CfoI	GCGC	1 cut(s)	687
Cfr10I	RCCGGY	1 cut(s)	338
Cfr13I	GGNCC	9 cut(s)	185, 305, 434, 553, 572, 614, 1181, 1335, 1336
Cfr9I	CCCGGG	1 cut(s)	808
CseI	GACGC	1 cut(s)	770
Csp6I	GTAC	2 cut(s)	940, 1368
CspCI	CAANNNNNGTGG	2 cut(s)	275, 310
CviAII	CATG	9 cut(s)	239, 269, 398, 411, 871, 1143, 1195, 1463, 1630
CviQI	GTAC	2 cut(s)	940, 1368
DdeI	CTNAG	2 cut(s)	416, 1687
DpnI	GATC	6 cut(s)	213, 421, 531, 692, 1304, 1734
DpnII	GATC	6 cut(s)	211, 419, 529, 690, 1302, 1732
EaeI	YGGCCR	1 cut(s)	1267
Eam1104I	CTCTTC	2 cut(s)	18, 1458
EarI	CTCTTC	2 cut(s)	18, 1458
Eco130I	CCWWGG	2 cut(s)	1177, 1523
Eco24I	GRGCYC	1 cut(s)	1339
Eco31I	GGTCTC	1 cut(s)	65
Eco32I	GATATC	1 cut(s)	115
Eco47I	GGWCC	4 cut(s)	305, 572, 614, 1181
Eco57I	CTGAAG	2 cut(s)	555, 706
Eco88I	CYCGRG	1 cut(s)	808
EcoO109I	RGGNCCY	4 cut(s)	553, 614, 1181, 1335
EcoRII	CCWGG	4 cut(s)	181, 549, 610, 1615
EcoRV	GATATC	1 cut(s)	115
EcoT14I	CCWWGG	2 cut(s)	1177, 1523
EcoT22I	ATGCAT	1 cut(s)	1635
EcoT38I	GRGCYC	1 cut(s)	1339
ErhI	CCWWGG	2 cut(s)	1177, 1523
FaeI	CATG	9 cut(s)	242, 272, 401, 414, 874, 1146, 1198, 1466, 1633
FalI	AAGNNNNNCTT	2 cut(s)	833, 865
FaqI	GGGAC	2 cut(s)	825, 1073
FatI	CATG	9 cut(s)	238, 268, 397, 410, 870, 1142, 1194, 1462, 1629
FauI	CCCGC	1 cut(s)	1098
FbaI	TGATCA	2 cut(s)	211, 690
Fnu4HI	GCNGC	7 cut(s)	699, 927, 1057, 1154, 1157, 1203, 1415
FokI	GGATG	2 cut(s)	245, 1434
FriOI	GRGCYC	1 cut(s)	1339
Fsp4HI	GCNGC	7 cut(s)	699, 927, 1057, 1154, 1157, 1203, 1415
FspBI	CTAG	8 cut(s)	201, 899, 935, 1398, 1425, 1524, 1604, 1656
GlaI	GCGC	1 cut(s)	686
GluI	GCNGC	7 cut(s)	699, 927, 1057, 1154, 1157, 1203, 1415
GsaI	CCCAGC	4 cut(s)	669, 1082, 1342, 1663
GsuI	CTGGAG	1 cut(s)	1053
HaeIII	GGCC	8 cut(s)	187, 375, 435, 554, 606, 883, 1269, 1337
HapII	CCGG	5 cut(s)	291, 308, 339, 809, 1007
HgaI	GACGC	1 cut(s)	770
HhaI	GCGC	1 cut(s)	687
Hin1II	CATG	9 cut(s)	242, 272, 401, 414, 874, 1146, 1198, 1466, 1633
Hin6I	GCGC	1 cut(s)	685
HinP1I	GCGC	1 cut(s)	685
HincII	GTYRAC	3 cut(s)	235, 1102, 1543
HindII	GTYRAC	3 cut(s)	235, 1102, 1543
HindIII	AAGCTT	1 cut(s)	650
HinfI	GANTC	2 cut(s)	274, 1467
HpaI	GTTAAC	1 cut(s)	235
HpaII	CCGG	5 cut(s)	291, 308, 339, 809, 1007
HphI	GGTGA	3 cut(s)	206, 221, 1576
Hpy166II	GTNNAC	4 cut(s)	169, 235, 1102, 1543
Hpy188I	TCNGA	2 cut(s)	586, 1302
Hpy188III	TCNNGA	4 cut(s)	533, 871, 935, 1070
Hpy8I	GTNNAC	4 cut(s)	169, 235, 1102, 1543
Hpy99I	CGWCG	1 cut(s)	713
HpyAV	CCTTC	2 cut(s)	689, 1320
HpyCH4III	ACNGT	3 cut(s)	166, 922, 1564
HpyCH4IV	ACGT	3 cut(s)	888, 1086, 1218
HpyCH4V	TGCA	8 cut(s)	86, 124, 559, 698, 731, 1031, 1417, 1633
HpyF10VI	GCNNNNNNNGC	3 cut(s)	381, 394, 1053
HpyF3I	CTNAG	2 cut(s)	416, 1687
HpySE526I	ACGT	3 cut(s)	888, 1086, 1218
Hsp92II	CATG	9 cut(s)	242, 272, 401, 414, 874, 1146, 1198, 1466, 1633
HspAI	GCGC	1 cut(s)	685
Ksp22I	TGATCA	2 cut(s)	211, 690
KspAI	GTTAAC	1 cut(s)	235
Kzo9I	GATC	6 cut(s)	211, 419, 529, 690, 1302, 1732
LguI	GCTCTTC	1 cut(s)	18
LmnI	GCTCC	1 cut(s)	993
Lsp1109I	GCAGC	7 cut(s)	710, 913, 1068, 1165, 1168, 1189, 1401
LweI	GCATC	2 cut(s)	577, 1371
MaeI	CTAG	8 cut(s)	201, 899, 935, 1398, 1425, 1524, 1604, 1656
MaeII	ACGT	3 cut(s)	888, 1086, 1218
MaeIII	GTNAC	3 cut(s)	130, 160, 889
MalI	GATC	6 cut(s)	213, 421, 531, 692, 1304, 1734
MbiI	CCGCTC	1 cut(s)	988
MboI	GATC	6 cut(s)	211, 419, 529, 690, 1302, 1732
MflI	RGATCY	2 cut(s)	529, 1732
MhlI	GDGCHC	2 cut(s)	1339, 1575
MlsI	TGGCCA	1 cut(s)	1269
MluCI	AATT	7 cut(s)	107, 176, 192, 999, 1314, 1324, 1513
MluNI	TGGCCA	1 cut(s)	1269
MmeI	TCCRAC	1 cut(s)	142
Mox20I	TGGCCA	1 cut(s)	1269
Mph1103I	ATGCAT	1 cut(s)	1635
MscI	TGGCCA	1 cut(s)	1269
MseI	TTAA	9 cut(s)	225, 234, 440, 600, 654, 774, 1061, 1323, 1392
MslI	CAYNNNNRTG	4 cut(s)	227, 267, 1400, 1461
Msp20I	TGGCCA	1 cut(s)	1269
MspA1I	CMGCKG	1 cut(s)	1342
MspCI	CTTAAG	1 cut(s)	653
MspI	CCGG	5 cut(s)	291, 308, 339, 809, 1007
MspR9I	CCNGG	8 cut(s)	183, 292, 551, 612, 809, 810, 1007, 1617
MvaI	CCWGG	4 cut(s)	183, 551, 612, 1617
MwoI	GCNNNNNNNGC	3 cut(s)	381, 394, 1053
NciI	CCSGG	4 cut(s)	292, 809, 810, 1007
NdeII	GATC	6 cut(s)	211, 419, 529, 690, 1302, 1732
NlaIII	CATG	9 cut(s)	242, 272, 401, 414, 874, 1146, 1198, 1466, 1633
NlaIV	GGNNCC	8 cut(s)	436, 531, 904, 1135, 1183, 1192, 1336, 1337
NmuCI	GTSAC	2 cut(s)	130, 889
NsiI	ATGCAT	1 cut(s)	1635
NspI	RCATGY	1 cut(s)	401
OliI	CACNNNNGTG	1 cut(s)	1400
PaeI	GCATGC	1 cut(s)	401
PagI	TCATGA	1 cut(s)	870
PciSI	GCTCTTC	1 cut(s)	18
PfeI	GAWTC	2 cut(s)	274, 1467
PflMI	CCANNNNNTGG	1 cut(s)	264
PkrI	GCNGC	7 cut(s)	700, 928, 1058, 1155, 1158, 1204, 1416
Ppu21I	YACGTR	1 cut(s)	889
PpuMI	RGGWCCY	2 cut(s)	614, 1181
PshBI	ATTAAT	1 cut(s)	600
Psp1406I	AACGTT	1 cut(s)	1218
Psp5II	RGGWCCY	2 cut(s)	614, 1181
Psp6I	CCWGG	4 cut(s)	181, 549, 610, 1615
PspFI	CCCAGC	4 cut(s)	665, 1078, 1338, 1659
PspGI	CCWGG	4 cut(s)	181, 549, 610, 1615
PspN4I	GGNNCC	8 cut(s)	436, 531, 904, 1135, 1183, 1192, 1336, 1337
PspOMI	GGGCCC	1 cut(s)	1335
PspPI	GGNCC	9 cut(s)	185, 305, 434, 553, 572, 614, 1181, 1335, 1336
PspPPI	RGGWCCY	2 cut(s)	614, 1181
PstI	CTGCAG	1 cut(s)	561
PstNI	CAGNNNCTG	2 cut(s)	556, 764
PsuI	RGATCY	2 cut(s)	529, 1732
PvuII	CAGCTG	1 cut(s)	1342
RsaI	GTAC	2 cut(s)	941, 1369
RsaNI	GTAC	2 cut(s)	940, 1368
RseI	CAYNNNNRTG	4 cut(s)	227, 267, 1400, 1461
SapI	GCTCTTC	1 cut(s)	18
SaqAI	TTAA	9 cut(s)	225, 234, 440, 600, 654, 774, 1061, 1323, 1392
SatI	GCNGC	7 cut(s)	699, 927, 1057, 1154, 1157, 1203, 1415
Sau3AI	GATC	6 cut(s)	211, 419, 529, 690, 1302, 1732
Sau96I	GGNCC	9 cut(s)	185, 305, 434, 553, 572, 614, 1181, 1335, 1336
ScrFI	CCNGG	8 cut(s)	183, 292, 551, 612, 809, 810, 1007, 1617
SduI	GDGCHC	2 cut(s)	1339, 1575
SfaNI	GCATC	2 cut(s)	577, 1371
SfcI	CTRYAG	1 cut(s)	557
SinI	GGWCC	4 cut(s)	305, 572, 614, 1181
SmaI	CCCGGG	1 cut(s)	810
SmiMI	CAYNNNNRTG	4 cut(s)	227, 267, 1400, 1461
SmlI	CTYRAG	1 cut(s)	653
SmoI	CTYRAG	1 cut(s)	653
SpeI	ACTAGT	2 cut(s)	1397, 1424
SphI	GCATGC	1 cut(s)	401
Sse9I	AATT	7 cut(s)	107, 176, 192, 999, 1314, 1324, 1513
SsiI	CCGC	4 cut(s)	876, 986, 1054, 1091
SspMI	CTAG	8 cut(s)	201, 899, 935, 1398, 1425, 1524, 1604, 1656
StyD4I	CCNGG	8 cut(s)	181, 290, 549, 610, 807, 808, 1005, 1615
StyI	CCWWGG	2 cut(s)	1177, 1523
TaaI	ACNGT	3 cut(s)	166, 922, 1564
TaiI	ACGT	3 cut(s)	891, 1089, 1221
TaqI	TCGA	3 cut(s)	190, 277, 753
TasI	AATT	7 cut(s)	107, 176, 192, 999, 1314, 1324, 1513
TfiI	GAWTC	2 cut(s)	274, 1467
Tru1I	TTAA	9 cut(s)	225, 234, 440, 600, 654, 774, 1061, 1323, 1392
Tru9I	TTAA	9 cut(s)	225, 234, 440, 600, 654, 774, 1061, 1323, 1392
TscAI	CASTG	4 cut(s)	708, 925, 1246, 1734
TseFI	GTSAC	2 cut(s)	130, 889
TseI	GCWGC	7 cut(s)	698, 926, 1056, 1153, 1156, 1202, 1414
Tsp45I	GTSAC	2 cut(s)	130, 889
TspDTI	ATGAA	5 cut(s)	37, 399, 1445, 1451, 1618
TspGWI	ACGGA	2 cut(s)	186, 1377
TspMI	CCCGGG	1 cut(s)	808
TspRI	CASTG	4 cut(s)	708, 925, 1246, 1734
Van91I	CCANNNNNTGG	1 cut(s)	264
Vha464I	CTTAAG	1 cut(s)	653
VpaK11BI	GGWCC	4 cut(s)	305, 572, 614, 1181
VspI	ATTAAT	1 cut(s)	600
XapI	RAATTY	1 cut(s)	107
XbaI	TCTAGA	1 cut(s)	934
XceI	RCATGY	1 cut(s)	401
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1184
XmaI	CCCGGG	1 cut(s)	808
XmaJI	CCTAGG	1 cut(s)	1523
XspI	CTAG	8 cut(s)	201, 899, 935, 1398, 1425, 1524, 1604, 1656
Zsp2I	ATGCAT	1 cut(s)	1635

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.