RLG00000024591

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000610
Physical Location & Seq
Reverse (-)
37306614 .. 37309005
2392 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024591

Sequence Viewer

Length: 1782 bp
ATGGGTTCTAGTCTTCCTGCATCACCAGCATTGTCAATGGTTATGATCTTCTTTGCGATTTGCGCGTTCTTTTGTGTACTACCGGAGCTAGCAGTGGCAAAGCATGCACGGGCTACCAGGCACTACAAGTTTAATATCAAGTCTCAAAGTGTGACGAGACTTTGTAAAACGAAGAGCATTATAACCGTGAATGGGCAGTTTCCGGGGCCTAGAATCATAGCAAGGGAAGGCGATAGGCTAGTGATCAAGGTGGTCAATCATGTTCAAAACAATGTCACCCTCCACTGGCATGGAATTAGGCAATTAAGGAGTGGATGGGCAGATGGACCTTCATATATAACGCAGTGCCCAATTCAGACAGGGCAGACTTATGTGTATAACTTCACCATCATTGGCCAGAGAGGCACACTGTGGTGGCATGCACACATCTCTTGGCTTAGGGCAACCCTCTATGGACCTATTGTCATTCTCCCTAAAAAGCATGTGCCTTACCCATTCCCCCAACCCTTCAAAGAAGTCCCCATCATATTTGGAGAATGGTGGAAAGCAAACACAGAAACAGTGATCAACCAAGGCTTACAAACAGGGTCAGGACCAAATGTCTCTGATGCCTACACCATTAATGGTCTTCCAGGACCATTGTATAACTGCTCAGCCAAAGATACATACAAGCTCAAGGTGAAGCCGGGGAAGACCTATCTGCTTCGTTTGATCAACGCTGCACTAAACAACGAGCTGTTCTTCAGCATTGCTAATCACACTTTCACTGTGGTCGAAGCGGATGCAGTGTATGTGAAACCTTTTAATACCAAAGTTGTTCTCATCACACCAGGACAGACCACCAATGTCATTTTGAGGACCAAATCCAAGTCCCCAAATGCCACATTTGTCATGGCAGCTAGGCCGTATGTCTCCGGCCCAGCTGCCTTTGACAACTCTACCACCACAGGTCTACTCGAATACGAAACTTCTGTCTCAAGCAAACACAACAAAAACAAGAACAAGAACAAGAACAAGGAGAAGCTGCCTCTTCTCACACCAGTGCTTCCAAAGCTCAATGACACATCGTTTTCAATGAACTACAACAAGAAAATCCGCAGCTTGGCCAATCCCAAATTCCCATCTGCAAATGTCCCGAAAACCGTGGACAAGAACTTCTTCTTCACAGTTGGTCTGGGACTAACTTCATGCTCAAAGAACCAAAACTGCCCAGGCCCAAACAACACCAGGGTCGCCGCGGCAATCAACAATGTGTCATTTGTGCAACCTAATACTGCCCTTCTCCAAGCCCACTTCTTCAACAAATCAAAGGGTGTGTACACCACAGATTTCCCAGCCAACCCATTAATCAAATTCAACTACACAGGTACTCCACCAAGCAACATTGCTTTGAGCAGTGGGACTAAGGTTGTGGTGCTGCCATTCAATACTAGTGTGGAGCTTGTTCTGCAAGACACTAGCATTATTGGGGCTGAGAGCCACCCACTTCACCTCCATGGATTCAATTTCTTTGTGGTGGGTTTCGGATTTGGAAATTTCGATCCTAAAAACGACCCTAAAAAGTACAACCTTGTTGATCCTGCTGAGAGGAACACAGTTGGTGTGCCCTCTGGTGGGTGGGTTGCCCTACGCTTCCTCGCCGATAATCCAGGCGTTTGGTTTATGCACTGCCACCTAGAAGTGCACACGAGCTGGGGATTGAAGATGGCGTGGGTTGTCACTGACGGAAAGCGGCGCAACCAAAAGCTGCCTCCCCCTCCATCAGATCTTCCCAAATGTTAA

Protein Analysis

594

Amino Acids

65.65

Weight (kDa)

9.81

Isoelectric Point (pI)

33.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 46 - 160 1.4e-43 Multicopper oxidase
Cu-oxidase PF00394 172 - 323 5.2e-44 Multicopper oxidase
Cu-oxidase_2 PF07731 445 - 576 2.4e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000610)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60020 AT5G60020 AT5G60020
fragaria_vesca FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 182
AccI GTMKAC 1 cut(s) 952
AccII CGCG 2 cut(s) 65, 1238
AciI CCGC 5 cut(s) 779, 1096, 1236, 1238, 1732
AclWI GGATC 2 cut(s) 1535, 1571
AcoI YGGCCR 2 cut(s) 394, 1104
AcsI RAATTY 3 cut(s) 1115, 1352, 1534
AcuI CTGAAG 1 cut(s) 727
AdeI CACNNNGTG 1 cut(s) 411
AfaI GTAC 4 cut(s) 78, 1319, 1369, 1565
AfiI CCNNNNNNNGG 5 cut(s) 192, 285, 1102, 1613, 1614
AgsI TTSAA 8 cut(s) 266, 511, 1074, 1300, 1357, 1426, 1504, 1702
AhdI GACNNNNNGTC 2 cut(s) 461, 599
AhlI ACTAGT 1 cut(s) 1430
AjnI CCWGG 6 cut(s) 116, 631, 829, 1210, 1226, 1648
AjuI GAANNNNNNNTTGG 2 cut(s) 1100, 1132
AleI CACNNNNGTG 2 cut(s) 412, 1040
Alw21I GWGCWC 1 cut(s) 1686
Alw26I GTCTC 5 cut(s) 147, 151, 607, 916, 979
Alw44I GTGCAC 1 cut(s) 1682
AlwI GGATC 2 cut(s) 1535, 1571
AoxI GGCC 6 cut(s) 206, 394, 902, 916, 1104, 1213
ApaLI GTGCAC 1 cut(s) 1682
ApeKI GCWGC 7 cut(s) 719, 896, 923, 1024, 1098, 1417, 1747
ApoI RAATTY 3 cut(s) 1115, 1352, 1534
ArsI GACNNNNNNTTYG 2 cut(s) 957, 989
AseI ATTAAT 2 cut(s) 621, 1346
Asp700I GAANNNNTTC 1 cut(s) 1157
AspLEI GCGC 2 cut(s) 65, 1737
AspS9I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1214
AsuC2I CCSGG 2 cut(s) 204, 687
AsuHPI GGTGA 5 cut(s) 15, 268, 376, 691, 1481
AsuNHI GCTAGC 1 cut(s) 88
AvaII GGWCC 5 cut(s) 326, 455, 593, 635, 858
BaeGI GKGCMC 3 cut(s) 350, 1608, 1686
BalI TGGCCA 2 cut(s) 396, 1106
BauI CACGAG 1 cut(s) 1687
BbsI GAAGAC 3 cut(s) 5, 620, 698
Bbv12I GWGCWC 1 cut(s) 1686
BbvI GCAGC 7 cut(s) 706, 908, 910, 1011, 1110, 1404, 1734
BccI CCATC 7 cut(s) 309, 317, 395, 530, 1129, 1699, 1768
BceAI ACGGC 1 cut(s) 889
BcgI CGANNNNNNTGC 2 cut(s) 764, 798
BciT130I CCWGG 6 cut(s) 118, 633, 831, 1212, 1228, 1650
BclI TGATCA 3 cut(s) 243, 564, 711
BcnI CCSGG 2 cut(s) 204, 687
BcoDI GTCTC 5 cut(s) 147, 151, 607, 916, 979
BcuI ACTAGT 1 cut(s) 1430
BfaI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1431, 1458, 1676
BglI GCCNNNNNGGC 1 cut(s) 402
BglII AGATCT 1 cut(s) 1765
BlpI GCTNAGC 1 cut(s) 652
Bme1390I CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1212, 1228, 1650
Bme18I GGWCC 5 cut(s) 326, 455, 593, 635, 858
BmeRI GACNNNNNGTC 2 cut(s) 461, 599
BmgT120I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1214
BmiI GGNNCC 1 cut(s) 207
BmrFI CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1212, 1228, 1650
BmsI GCATC 3 cut(s) 29, 598, 772
BmtI GCTAGC 1 cut(s) 92
BpiI GAAGAC 3 cut(s) 5, 620, 698
Bpu10I CCTNAGC 1 cut(s) 437
Bpu1102I GCTNAGC 1 cut(s) 652
BpuEI CTTGAG 2 cut(s) 659, 961
BpuMI CCSGG 2 cut(s) 204, 687
BsaJI CCNNGG 8 cut(s) 203, 571, 686, 1143, 1210, 1227, 1236, 1495
BsaWI WCCGGW 1 cut(s) 82
BsaXI ACNNNNNCTCC 4 cut(s) 1354, 1384, 1476, 1506
Bsc4I CCNNNNNNNGG 5 cut(s) 192, 285, 1102, 1613, 1614
Bse1I ACTGG 2 cut(s) 290, 1040
Bse3DI GCAATG 2 cut(s) 747, 1383
BseBI CCWGG 6 cut(s) 118, 633, 831, 1212, 1228, 1650
BseDI CCNNGG 8 cut(s) 203, 571, 686, 1143, 1210, 1227, 1236, 1495
BseGI GGATG 2 cut(s) 320, 787
BseLI CCNNNNNNNGG 5 cut(s) 192, 285, 1102, 1613, 1614
BseMI GCAATG 2 cut(s) 747, 1383
BseMII CTCAG 3 cut(s) 666, 1464, 1575
BseNI ACTGG 2 cut(s) 290, 1040
BseSI GKGCMC 3 cut(s) 350, 1608, 1686
BseXI GCAGC 7 cut(s) 706, 908, 910, 1011, 1110, 1404, 1734
BseYI CCCAGC 3 cut(s) 919, 1333, 1692
BsgI GTGCAG 1 cut(s) 705
Bsh1236I CGCG 2 cut(s) 65, 1238
BshFI GGCC 6 cut(s) 208, 396, 904, 918, 1106, 1215
BsiHKAI GWGCWC 1 cut(s) 1686
BsiSI CCGG 4 cut(s) 83, 203, 686, 915
BslFI GGGAC 5 cut(s) 503, 856, 1118, 1191, 1414
BslI CCNNNNNNNGG 5 cut(s) 192, 285, 1102, 1613, 1614
BsmAI GTCTC 5 cut(s) 147, 151, 607, 916, 979
BsmFI GGGAC 5 cut(s) 503, 856, 1118, 1191, 1414
BsnI GGCC 6 cut(s) 208, 396, 904, 918, 1106, 1215
Bsp1286I GDGCHC 3 cut(s) 350, 1608, 1686
Bsp1407I TGTACA 1 cut(s) 1317
Bsp143I GATC 7 cut(s) 45, 243, 564, 711, 1540, 1576, 1765
Bsp1720I GCTNAGC 1 cut(s) 652
Bsp19I CCATGG 1 cut(s) 1495
BspACI CCGC 5 cut(s) 779, 1096, 1236, 1238, 1732
BspANI GGCC 6 cut(s) 208, 396, 904, 918, 1106, 1215
BspCNI CTCAG 3 cut(s) 665, 1465, 1576
BspFNI CGCG 2 cut(s) 65, 1238
BspLI GGNNCC 1 cut(s) 207
BspOI GCTAGC 1 cut(s) 92
BspPI GGATC 2 cut(s) 1535, 1571
BspQI GCTCTTC 1 cut(s) 167
BsrDI GCAATG 2 cut(s) 747, 1383
BsrGI TGTACA 1 cut(s) 1317
BsrI ACTGG 2 cut(s) 290, 1040
BssECI CCNNGG 8 cut(s) 203, 571, 686, 1143, 1210, 1227, 1236, 1495
BssMI GATC 7 cut(s) 45, 243, 564, 711, 1540, 1576, 1765
BssSI CACGAG 1 cut(s) 1687
BssT1I CCWWGG 2 cut(s) 571, 1495
Bst2BI CACGAG 1 cut(s) 1687
Bst2UI CCWGG 6 cut(s) 118, 633, 831, 1212, 1228, 1650
Bst4CI ACNGT 7 cut(s) 187, 411, 562, 769, 1144, 1168, 1597
Bst6I CTCTTC 2 cut(s) 167, 1035
BstAPI GCANNNNNTGC 1 cut(s) 104
BstAUI TGTACA 1 cut(s) 1317
BstC8I GCNNGC 3 cut(s) 90, 105, 420
BstDEI CTNAG 5 cut(s) 437, 652, 1404, 1473, 1584
BstDSI CCRYGG 3 cut(s) 1143, 1236, 1495
BstF5I GGATG 2 cut(s) 320, 787
BstFNI CGCG 2 cut(s) 65, 1238
BstHHI GCGC 2 cut(s) 65, 1737
BstKTI GATC 7 cut(s) 48, 246, 567, 714, 1543, 1579, 1768
BstMAI GTCTC 5 cut(s) 147, 151, 607, 916, 979
BstMBI GATC 7 cut(s) 45, 243, 564, 711, 1540, 1576, 1765
BstMWI GCNNNNNNNGC 6 cut(s) 26, 62, 104, 402, 1051, 1447
BstNI CCWGG 6 cut(s) 118, 633, 831, 1212, 1228, 1650
BstNSI RCATGY 3 cut(s) 107, 422, 485
BstSCI CCNGG 8 cut(s) 116, 202, 631, 685, 829, 1210, 1226, 1648
BstSLI GKGCMC 3 cut(s) 350, 1608, 1686
BstUI CGCG 2 cut(s) 65, 1238
BstV1I GCAGC 7 cut(s) 706, 908, 910, 1011, 1110, 1404, 1734
BstV2I GAAGAC 3 cut(s) 5, 620, 698
BstX2I RGATCY 1 cut(s) 1765
BstXI CCANNNNNNTGG 2 cut(s) 290, 1656
BstYI RGATCY 1 cut(s) 1765
BsuRI GGCC 6 cut(s) 208, 396, 904, 918, 1106, 1215
BtgI CCRYGG 3 cut(s) 1143, 1236, 1495
BtsCI GGATG 2 cut(s) 320, 787
BtsI GCAGTG 5 cut(s) 99, 350, 792, 1402, 1666
Cac8I GCNNGC 3 cut(s) 90, 105, 420
CfoI GCGC 2 cut(s) 65, 1737
Cfr13I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1214
Cfr42I CCGCGG 1 cut(s) 1239
Csp6I GTAC 4 cut(s) 77, 1318, 1368, 1564
CviAII CATG 8 cut(s) 104, 260, 290, 419, 482, 892, 1188, 1496
CviQI GTAC 4 cut(s) 77, 1318, 1368, 1564
DdeI CTNAG 5 cut(s) 437, 652, 1404, 1473, 1584
DpnI GATC 7 cut(s) 47, 245, 566, 713, 1542, 1578, 1767
DpnII GATC 7 cut(s) 45, 243, 564, 711, 1540, 1576, 1765
DraIII CACNNNGTG 1 cut(s) 411
DriI GACNNNNNGTC 2 cut(s) 461, 599
EaeI YGGCCR 2 cut(s) 394, 1104
Eam1104I CTCTTC 2 cut(s) 167, 1035
Eam1105I GACNNNNNGTC 2 cut(s) 461, 599
EarI CTCTTC 2 cut(s) 167, 1035
Eco130I CCWWGG 2 cut(s) 571, 1495
Eco47I GGWCC 5 cut(s) 326, 455, 593, 635, 858
Eco57I CTGAAG 1 cut(s) 727
EcoO109I RGGNCCY 1 cut(s) 206
EcoRII CCWGG 6 cut(s) 116, 631, 829, 1210, 1226, 1648
EcoT14I CCWWGG 2 cut(s) 571, 1495
ErhI CCWWGG 2 cut(s) 571, 1495
FaeI CATG 8 cut(s) 107, 263, 293, 422, 485, 895, 1191, 1499
FalI AAGNNNNNCTT 2 cut(s) 1142, 1174
FaqI GGGAC 5 cut(s) 503, 856, 1118, 1191, 1414
FatI CATG 8 cut(s) 103, 259, 289, 418, 481, 891, 1187, 1495
FbaI TGATCA 3 cut(s) 243, 564, 711
FblI GTMKAC 1 cut(s) 952
FokI GGATG 2 cut(s) 327, 794
FspBI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1431, 1458, 1676
GlaI GCGC 2 cut(s) 64, 1736
GsaI CCCAGC 3 cut(s) 923, 1337, 1696
HaeIII GGCC 6 cut(s) 208, 396, 904, 918, 1106, 1215
HapII CCGG 4 cut(s) 83, 203, 686, 915
HhaI GCGC 2 cut(s) 65, 1737
Hin1II CATG 8 cut(s) 107, 263, 293, 422, 485, 895, 1191, 1499
Hin6I GCGC 2 cut(s) 63, 1735
HinP1I GCGC 2 cut(s) 63, 1735
HinfI GANTC 2 cut(s) 213, 1500
HpaII CCGG 4 cut(s) 83, 203, 686, 915
HphI GGTGA 5 cut(s) 15, 268, 376, 691, 1481
Hpy166II GTNNAC 6 cut(s) 77, 953, 1147, 1318, 1320, 1684
Hpy188I TCNGA 4 cut(s) 357, 607, 1526, 1765
Hpy188III TCNNGA 2 cut(s) 591, 1135
Hpy8I GTNNAC 6 cut(s) 77, 953, 1147, 1318, 1320, 1684
HpyAV CCTTC 4 cut(s) 221, 339, 517, 1289
HpyCH4III ACNGT 7 cut(s) 187, 411, 562, 769, 1144, 1168, 1597
HpyF10VI GCNNNNNNNGC 6 cut(s) 26, 62, 104, 402, 1051, 1447
HpyF3I CTNAG 5 cut(s) 437, 652, 1404, 1473, 1584
Hsp92II CATG 8 cut(s) 107, 263, 293, 422, 485, 895, 1191, 1499
HspAI GCGC 2 cut(s) 63, 1735
Ksp22I TGATCA 3 cut(s) 243, 564, 711
KspI CCGCGG 1 cut(s) 1239
Kzo9I GATC 7 cut(s) 45, 243, 564, 711, 1540, 1576, 1765
LguI GCTCTTC 1 cut(s) 167
LmnI GCTCC 2 cut(s) 85, 1438
Lsp1109I GCAGC 7 cut(s) 706, 908, 910, 1011, 1110, 1404, 1734
LweI GCATC 3 cut(s) 29, 598, 772
MaeI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1431, 1458, 1676
MaeIII GTNAC 3 cut(s) 151, 274, 1717
MalI GATC 7 cut(s) 47, 245, 566, 713, 1542, 1578, 1767
MboI GATC 7 cut(s) 45, 243, 564, 711, 1540, 1576, 1765
MflI RGATCY 1 cut(s) 1765
MhlI GDGCHC 3 cut(s) 350, 1608, 1686
MlsI TGGCCA 2 cut(s) 396, 1106
MluCI AATT 7 cut(s) 294, 302, 351, 1115, 1352, 1504, 1534
MluNI TGGCCA 2 cut(s) 396, 1106
Mox20I TGGCCA 2 cut(s) 396, 1106
MroXI GAANNNNTTC 1 cut(s) 1157
MscI TGGCCA 2 cut(s) 396, 1106
MseI TTAA 6 cut(s) 132, 305, 621, 804, 1346, 1780
MslI CAYNNNNRTG 4 cut(s) 288, 412, 1040, 1494
Msp20I TGGCCA 2 cut(s) 396, 1106
MspA1I CMGCKG 2 cut(s) 923, 1238
MspI CCGG 4 cut(s) 83, 203, 686, 915
MspR9I CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1212, 1228, 1650
MvaI CCWGG 6 cut(s) 118, 633, 831, 1212, 1228, 1650
MvnI CGCG 2 cut(s) 65, 1238
MwoI GCNNNNNNNGC 6 cut(s) 26, 62, 104, 402, 1051, 1447
NciI CCSGG 2 cut(s) 204, 687
NcoI CCATGG 1 cut(s) 1495
NdeII GATC 7 cut(s) 45, 243, 564, 711, 1540, 1576, 1765
NheI GCTAGC 1 cut(s) 88
NlaIII CATG 8 cut(s) 107, 263, 293, 422, 485, 895, 1191, 1499
NlaIV GGNNCC 1 cut(s) 207
NmuCI GTSAC 3 cut(s) 151, 274, 1717
NspI RCATGY 3 cut(s) 107, 422, 485
OliI CACNNNNGTG 2 cut(s) 412, 1040
PaeI GCATGC 2 cut(s) 107, 422
PciSI GCTCTTC 1 cut(s) 167
PdmI GAANNNNTTC 1 cut(s) 1157
PfeI GAWTC 2 cut(s) 213, 1500
PfoI TCCNGGA 1 cut(s) 631
PshBI ATTAAT 2 cut(s) 621, 1346
PsiI TTATAA 1 cut(s) 182
Psp6I CCWGG 6 cut(s) 116, 631, 829, 1210, 1226, 1648
PspFI CCCAGC 3 cut(s) 919, 1333, 1692
PspGI CCWGG 6 cut(s) 116, 631, 829, 1210, 1226, 1648
PspN4I GGNNCC 1 cut(s) 207
PspPI GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1214
PsuI RGATCY 1 cut(s) 1765
PvuII CAGCTG 1 cut(s) 923
RsaI GTAC 4 cut(s) 78, 1319, 1369, 1565
RsaNI GTAC 4 cut(s) 77, 1318, 1368, 1564
RseI CAYNNNNRTG 4 cut(s) 288, 412, 1040, 1494
SacII CCGCGG 1 cut(s) 1239
SapI GCTCTTC 1 cut(s) 167
SaqAI TTAA 6 cut(s) 132, 305, 621, 804, 1346, 1780
Sau3AI GATC 7 cut(s) 45, 243, 564, 711, 1540, 1576, 1765
Sau96I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1214
ScrFI CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1212, 1228, 1650
SduI GDGCHC 3 cut(s) 350, 1608, 1686
SfaNI GCATC 3 cut(s) 29, 598, 772
Sfr303I CCGCGG 1 cut(s) 1239
SgrBI CCGCGG 1 cut(s) 1239
SinI GGWCC 5 cut(s) 326, 455, 593, 635, 858
SmiMI CAYNNNNRTG 4 cut(s) 288, 412, 1040, 1494
SmlI CTYRAG 2 cut(s) 674, 976
SmoI CTYRAG 2 cut(s) 674, 976
SpeI ACTAGT 1 cut(s) 1430
SphI GCATGC 2 cut(s) 107, 422
Sse9I AATT 7 cut(s) 294, 302, 351, 1115, 1352, 1504, 1534
SsiI CCGC 5 cut(s) 779, 1096, 1236, 1238, 1732
SspMI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1431, 1458, 1676
StyD4I CCNGG 8 cut(s) 116, 202, 631, 685, 829, 1210, 1226, 1648
StyI CCWWGG 2 cut(s) 571, 1495
TaaI ACNGT 7 cut(s) 187, 411, 562, 769, 1144, 1168, 1597
TaqI TCGA 3 cut(s) 774, 957, 1539
TasI AATT 7 cut(s) 294, 302, 351, 1115, 1352, 1504, 1534
TatI WGTACW 3 cut(s) 76, 1317, 1563
TauI GCSGC 3 cut(s) 1238, 1241, 1735
TfiI GAWTC 2 cut(s) 213, 1500
Tru1I TTAA 6 cut(s) 132, 305, 621, 804, 1346, 1780
Tru9I TTAA 6 cut(s) 132, 305, 621, 804, 1346, 1780
TseFI GTSAC 3 cut(s) 151, 274, 1717
TseI GCWGC 7 cut(s) 719, 896, 923, 1024, 1098, 1417, 1747
Tsp45I GTSAC 3 cut(s) 151, 274, 1717
TspDTI ATGAA 3 cut(s) 321, 1091, 1176
TspGWI ACGGA 1 cut(s) 1740
VneI GTGCAC 1 cut(s) 1682
VpaK11BI GGWCC 5 cut(s) 326, 455, 593, 635, 858
VspI ATTAAT 2 cut(s) 621, 1346
XapI RAATTY 3 cut(s) 1115, 1352, 1534
XceI RCATGY 3 cut(s) 107, 422, 485
XcmI CCANNNNNNNNNTGG 1 cut(s) 889
XmiI GTMKAC 1 cut(s) 952
XmnI GAANNNNTTC 1 cut(s) 1157
XspI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1431, 1458, 1676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.