Lignin degradation and detoxification of lignin-derived products
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 248, 767 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 129, 323 |
| AccII | CGCG | 1 cut(s) | 9 |
| AciI | CCGC | 4 cut(s) | 741, 816, 919, 1446 |
| AclI | AACGTT | 2 cut(s) | 690, 1083 |
| AclWI | GGATC | 4 cut(s) | 147, 389, 1507, 1605 |
| AcoI | YGGCCR | 1 cut(s) | 1132 |
| AcuI | CTGAAG | 3 cut(s) | 420, 539, 571 |
| AcyI | GRCGYC | 2 cut(s) | 453, 627 |
| AfaI | GTAC | 3 cut(s) | 363, 806, 1234 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 61, 129, 258, 323, 613, 1141, 1445, 1446, 1449 |
| AflIII | ACRYGT | 1 cut(s) | 1607 |
| AgsI | TTSAA | 7 cut(s) | 514, 527, 1074, 1336, 1399, 1418, 1534 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 189 |
| AhlI | ACTAGT | 2 cut(s) | 1262, 1289 |
| AjnI | CCWGG | 3 cut(s) | 414, 475, 1480 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 494, 526, 698, 730 |
| AluBI | AGCT | 9 cut(s) | 517, 530, 580, 875, 924, 947, 1207, 1240, 1524 |
| AluI | AGCT | 9 cut(s) | 517, 530, 580, 875, 924, 947, 1207, 1240, 1524 |
| Alw21I | GWGCWC | 1 cut(s) | 582 |
| Alw26I | GTCTC | 1 cut(s) | 451 |
| AlwI | GGATC | 4 cut(s) | 147, 389, 1507, 1605 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 398 |
| Ama87I | CYCGRG | 1 cut(s) | 673 |
| AoxI | GGCC | 5 cut(s) | 162, 170, 436, 746, 1132 |
| ApeKI | GCWGC | 5 cut(s) | 563, 921, 1018, 1021, 1067 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 875, 907 |
| AseI | ATTAAT | 1 cut(s) | 465 |
| AspS9I | GGNCC | 6 cut(s) | 162, 170, 299, 437, 479, 1046 |
| AsuC2I | CCSGG | 3 cut(s) | 157, 674, 675 |
| AvaI | CYCGRG | 1 cut(s) | 673 |
| AvaII | GGWCC | 3 cut(s) | 299, 479, 1046 |
| BalI | TGGCCA | 1 cut(s) | 1134 |
| BanI | GGYRCC | 2 cut(s) | 248, 767 |
| BanII | GRGCYC | 2 cut(s) | 582, 1204 |
| Bbv12I | GWGCWC | 1 cut(s) | 582 |
| BbvI | GCAGC | 5 cut(s) | 575, 933, 1030, 1033, 1054 |
| BccI | CCATC | 4 cut(s) | 131, 161, 1531, 1550 |
| BceAI | ACGGC | 1 cut(s) | 614 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 33, 122, 156 |
| BciT130I | CCWGG | 3 cut(s) | 416, 477, 1482 |
| BcnI | CCSGG | 3 cut(s) | 157, 674, 675 |
| BcoDI | GTCTC | 1 cut(s) | 451 |
| BcuI | ACTAGT | 2 cut(s) | 1262, 1289 |
| BfaI | CTAG | 7 cut(s) | 764, 800, 1263, 1290, 1469, 1521, 1553 |
| BisI | GCNGC | 5 cut(s) | 564, 922, 1019, 1022, 1068 |
| BlsI | GCNGC | 5 cut(s) | 565, 923, 1020, 1023, 1069 |
| Bme1390I | CCNGG | 6 cut(s) | 157, 416, 477, 674, 675, 1482 |
| Bme18I | GGWCC | 3 cut(s) | 299, 479, 1046 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 189 |
| BmeT110I | CYCGRG | 1 cut(s) | 673 |
| BmgT120I | GGNCC | 6 cut(s) | 162, 170, 299, 437, 479, 1046 |
| BmiI | GGNNCC | 5 cut(s) | 250, 769, 1000, 1048, 1201 |
| BmrFI | CCNGG | 6 cut(s) | 157, 416, 477, 674, 675, 1482 |
| BpuMI | CCSGG | 3 cut(s) | 157, 674, 675 |
| BsaAI | YACGTR | 1 cut(s) | 754 |
| BsaHI | GRCGYC | 2 cut(s) | 453, 627 |
| BsaJI | CCNNGG | 5 cut(s) | 295, 672, 673, 1042, 1480 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 104, 134, 837, 852, 867, 882, 1262, 1292 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 61, 129, 258, 323, 613, 1141, 1445, 1446, 1449 |
| Bse118I | RCCGGY | 1 cut(s) | 172 |
| Bse1I | ACTGG | 2 cut(s) | 433, 763 |
| Bse3DI | GCAATG | 3 cut(s) | 591, 666, 1234 |
| BseBI | CCWGG | 3 cut(s) | 416, 477, 1482 |
| BseDI | CCNNGG | 5 cut(s) | 295, 672, 673, 1042, 1480 |
| BseGI | GGATG | 2 cut(s) | 123, 1312 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 61, 129, 258, 323, 613, 1141, 1445, 1446, 1449 |
| BseMI | GCAATG | 3 cut(s) | 591, 666, 1234 |
| BseMII | CTCAG | 2 cut(s) | 295, 462 |
| BseNI | ACTGG | 2 cut(s) | 433, 763 |
| BseXI | GCAGC | 5 cut(s) | 575, 933, 1030, 1033, 1054 |
| BseYI | CCCAGC | 5 cut(s) | 530, 871, 943, 1203, 1524 |
| Bsh1236I | CGCG | 1 cut(s) | 9 |
| BshFI | GGCC | 5 cut(s) | 164, 172, 438, 748, 1134 |
| BshNI | GGYRCC | 2 cut(s) | 248, 767 |
| BsiHKAI | GWGCWC | 1 cut(s) | 582 |
| BsiHKCI | CYCGRG | 1 cut(s) | 673 |
| BsiSI | CCGG | 4 cut(s) | 156, 173, 674, 1443 |
| BslFI | GGGAC | 2 cut(s) | 690, 938 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 61, 129, 258, 323, 613, 1141, 1445, 1446, 1449 |
| BsmAI | GTCTC | 1 cut(s) | 451 |
| BsmFI | GGGAC | 2 cut(s) | 690, 938 |
| BsmI | GAATGC | 2 cut(s) | 394, 795 |
| BsnI | GGCC | 5 cut(s) | 164, 172, 438, 748, 1134 |
| BsoBI | CYCGRG | 1 cut(s) | 673 |
| Bsp1286I | GDGCHC | 2 cut(s) | 582, 1204 |
| Bsp143I | GATC | 7 cut(s) | 31, 152, 284, 394, 1167, 1512, 1597 |
| BspACI | CCGC | 4 cut(s) | 741, 816, 919, 1446 |
| BspANI | GGCC | 5 cut(s) | 164, 172, 438, 748, 1134 |
| BspCNI | CTCAG | 2 cut(s) | 294, 461 |
| BspFNI | CGCG | 1 cut(s) | 9 |
| BspHI | TCATGA | 1 cut(s) | 735 |
| BspLI | GGNNCC | 5 cut(s) | 250, 769, 1000, 1048, 1201 |
| BspPI | GGATC | 4 cut(s) | 147, 389, 1507, 1605 |
| BspQI | GCTCTTC | 1 cut(s) | 587 |
| BspT107I | GGYRCC | 2 cut(s) | 248, 767 |
| BsrDI | GCAATG | 3 cut(s) | 591, 666, 1234 |
| BsrFI | RCCGGY | 1 cut(s) | 172 |
| BsrI | ACTGG | 2 cut(s) | 433, 763 |
| BssAI | RCCGGY | 1 cut(s) | 172 |
| BssECI | CCNNGG | 5 cut(s) | 295, 672, 673, 1042, 1480 |
| BssMI | GATC | 7 cut(s) | 31, 152, 284, 394, 1167, 1512, 1597 |
| BssNI | GRCGYC | 2 cut(s) | 453, 627 |
| BssT1I | CCWWGG | 1 cut(s) | 1042 |
| Bst2UI | CCWGG | 3 cut(s) | 416, 477, 1482 |
| Bst4CI | ACNGT | 7 cut(s) | 212, 292, 299, 494, 939, 1429, 1593 |
| Bst6I | CTCTTC | 2 cut(s) | 587, 1323 |
| BstACI | GRCGYC | 2 cut(s) | 453, 627 |
| BstBAI | YACGTR | 1 cut(s) | 754 |
| BstC8I | GCNNGC | 5 cut(s) | 174, 264, 793, 910, 1016 |
| BstDEI | CTNAG | 3 cut(s) | 281, 448, 1389 |
| BstDSI | CCRYGG | 1 cut(s) | 295 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 59 |
| BstF5I | GGATG | 2 cut(s) | 123, 1312 |
| BstFNI | CGCG | 1 cut(s) | 9 |
| BstKTI | GATC | 7 cut(s) | 34, 155, 287, 397, 1170, 1515, 1600 |
| BstMAI | GTCTC | 1 cut(s) | 451 |
| BstMBI | GATC | 7 cut(s) | 31, 152, 284, 394, 1167, 1512, 1597 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 918, 1011, 1246 |
| BstNI | CCWGG | 3 cut(s) | 416, 477, 1482 |
| BstNSI | RCATGY | 2 cut(s) | 266, 1611 |
| BstSCI | CCNGG | 6 cut(s) | 155, 414, 475, 672, 673, 1480 |
| BstUI | CGCG | 1 cut(s) | 9 |
| BstV1I | GCAGC | 5 cut(s) | 575, 933, 1030, 1033, 1054 |
| BstX2I | RGATCY | 3 cut(s) | 394, 1512, 1597 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 134, 1130 |
| BstYI | RGATCY | 3 cut(s) | 394, 1512, 1597 |
| BsuRI | GGCC | 5 cut(s) | 164, 172, 438, 748, 1134 |
| BtgI | CCRYGG | 1 cut(s) | 295 |
| BtsCI | GGATG | 2 cut(s) | 123, 1312 |
| BtsI | GCAGTG | 1 cut(s) | 1104 |
| BtsIMutI | CAGTG | 2 cut(s) | 836, 1104 |
| Cac8I | GCNNGC | 5 cut(s) | 174, 264, 793, 910, 1016 |
| CaiI | CAGNNNCTG | 1 cut(s) | 398 |
| CciI | TCATGA | 1 cut(s) | 735 |
| Cfr10I | RCCGGY | 1 cut(s) | 172 |
| Cfr13I | GGNCC | 6 cut(s) | 162, 170, 299, 437, 479, 1046 |
| Cfr9I | CCCGGG | 1 cut(s) | 673 |
| CseI | GACGC | 2 cut(s) | 461, 635 |
| Csp6I | GTAC | 3 cut(s) | 362, 805, 1233 |
| CviQI | GTAC | 3 cut(s) | 362, 805, 1233 |
| DdeI | CTNAG | 3 cut(s) | 281, 448, 1389 |
| DpnI | GATC | 7 cut(s) | 33, 154, 286, 396, 1169, 1514, 1599 |
| DpnII | GATC | 7 cut(s) | 31, 152, 284, 394, 1167, 1512, 1597 |
| DriI | GACNNNNNGTC | 1 cut(s) | 189 |
| EaeI | YGGCCR | 1 cut(s) | 1132 |
| Eam1104I | CTCTTC | 2 cut(s) | 587, 1323 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 189 |
| EarI | CTCTTC | 2 cut(s) | 587, 1323 |
| Ecl136II | GAGCTC | 1 cut(s) | 580 |
| Eco130I | CCWWGG | 1 cut(s) | 1042 |
| Eco24I | GRGCYC | 2 cut(s) | 582, 1204 |
| Eco47I | GGWCC | 3 cut(s) | 299, 479, 1046 |
| Eco53kI | GAGCTC | 1 cut(s) | 580 |
| Eco57I | CTGAAG | 3 cut(s) | 420, 539, 571 |
| Eco88I | CYCGRG | 1 cut(s) | 673 |
| EcoICRI | GAGCTC | 1 cut(s) | 580 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 59 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1046 |
| EcoRII | CCWGG | 3 cut(s) | 414, 475, 1480 |
| EcoT14I | CCWWGG | 1 cut(s) | 1042 |
| EcoT22I | ATGCAT | 1 cut(s) | 1500 |
| EcoT38I | GRGCYC | 2 cut(s) | 582, 1204 |
| ErhI | CCWWGG | 1 cut(s) | 1042 |
| FaqI | GGGAC | 2 cut(s) | 690, 938 |
| FauI | CCCGC | 1 cut(s) | 1439 |
| FauNDI | CATATG | 1 cut(s) | 178 |
| Fnu4HI | GCNGC | 5 cut(s) | 564, 922, 1019, 1022, 1068 |
| FokI | GGATG | 2 cut(s) | 110, 1299 |
| FriOI | GRGCYC | 2 cut(s) | 582, 1204 |
| Fsp4HI | GCNGC | 5 cut(s) | 564, 922, 1019, 1022, 1068 |
| FspBI | CTAG | 7 cut(s) | 764, 800, 1263, 1290, 1469, 1521, 1553 |
| GluI | GCNGC | 5 cut(s) | 564, 922, 1019, 1022, 1068 |
| GsaI | CCCAGC | 5 cut(s) | 534, 875, 947, 1207, 1528 |
| HaeIII | GGCC | 5 cut(s) | 164, 172, 438, 748, 1134 |
| HapII | CCGG | 4 cut(s) | 156, 173, 674, 1443 |
| HgaI | GACGC | 2 cut(s) | 461, 635 |
| Hin1I | GRCGYC | 2 cut(s) | 453, 627 |
| HincII | GTYRAC | 2 cut(s) | 967, 1408 |
| HindII | GTYRAC | 2 cut(s) | 967, 1408 |
| HinfI | GANTC | 1 cut(s) | 139 |
| HpaII | CCGG | 4 cut(s) | 156, 173, 674, 1443 |
| Hpy166II | GTNNAC | 4 cut(s) | 109, 295, 967, 1408 |
| Hpy188I | TCNGA | 4 cut(s) | 284, 451, 1167, 1597 |
| Hpy188III | TCNNGA | 3 cut(s) | 398, 736, 800 |
| Hpy8I | GTNNAC | 4 cut(s) | 109, 295, 967, 1408 |
| Hpy99I | CGWCG | 1 cut(s) | 1597 |
| HpyAV | CCTTC | 5 cut(s) | 55, 514, 554, 655, 781 |
| HpyCH4III | ACNGT | 7 cut(s) | 212, 292, 299, 494, 939, 1429, 1593 |
| HpyCH4IV | ACGT | 4 cut(s) | 690, 753, 951, 1083 |
| HpyCH4V | TGCA | 7 cut(s) | 20, 392, 596, 896, 1282, 1457, 1498 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 918, 1011, 1246 |
| HpyF3I | CTNAG | 3 cut(s) | 281, 448, 1389 |
| HpySE526I | ACGT | 4 cut(s) | 690, 753, 951, 1083 |
| Hsp92I | GRCGYC | 2 cut(s) | 453, 627 |
| KroI | GCCGGC | 1 cut(s) | 172 |
| KroNI | GCCGGC | 1 cut(s) | 174 |
| Kzo9I | GATC | 7 cut(s) | 31, 152, 284, 394, 1167, 1512, 1597 |
| LguI | GCTCTTC | 1 cut(s) | 587 |
| LmnI | GCTCC | 1 cut(s) | 1199 |
| Lsp1109I | GCAGC | 5 cut(s) | 575, 933, 1030, 1033, 1054 |
| MaeI | CTAG | 7 cut(s) | 764, 800, 1263, 1290, 1469, 1521, 1553 |
| MaeII | ACGT | 4 cut(s) | 690, 753, 951, 1083 |
| MaeIII | GTNAC | 4 cut(s) | 181, 206, 754, 1502 |
| MalI | GATC | 7 cut(s) | 33, 154, 286, 396, 1169, 1514, 1599 |
| MboI | GATC | 7 cut(s) | 31, 152, 284, 394, 1167, 1512, 1597 |
| MflI | RGATCY | 3 cut(s) | 394, 1512, 1597 |
| MhlI | GDGCHC | 2 cut(s) | 582, 1204 |
| MlsI | TGGCCA | 1 cut(s) | 1134 |
| MluCI | AATT | 4 cut(s) | 12, 1189, 1336, 1458 |
| MluNI | TGGCCA | 1 cut(s) | 1134 |
| MmeI | TCCRAC | 1 cut(s) | 1575 |
| MnlI | CCTC | 9 cut(s) | 64, 239, 312, 428, 617, 842, 1326, 1450, 1596 |
| Mox20I | TGGCCA | 1 cut(s) | 1134 |
| Mph1103I | ATGCAT | 1 cut(s) | 1500 |
| MroNI | GCCGGC | 1 cut(s) | 172 |
| MscI | TGGCCA | 1 cut(s) | 1134 |
| MseI | TTAA | 7 cut(s) | 90, 99, 465, 926, 1178, 1188, 1257 |
| MslI | CAYNNNNRTG | 2 cut(s) | 132, 1326 |
| Msp20I | TGGCCA | 1 cut(s) | 1134 |
| MspA1I | CMGCKG | 1 cut(s) | 1207 |
| MspI | CCGG | 4 cut(s) | 156, 173, 674, 1443 |
| MspR9I | CCNGG | 6 cut(s) | 157, 416, 477, 674, 675, 1482 |
| Mva1269I | GAATGC | 2 cut(s) | 394, 795 |
| MvaI | CCWGG | 3 cut(s) | 416, 477, 1482 |
| MvnI | CGCG | 1 cut(s) | 9 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 918, 1011, 1246 |
| NaeI | GCCGGC | 1 cut(s) | 174 |
| NciI | CCSGG | 3 cut(s) | 157, 674, 675 |
| NdeI | CATATG | 1 cut(s) | 178 |
| NdeII | GATC | 7 cut(s) | 31, 152, 284, 394, 1167, 1512, 1597 |
| NgoMIV | GCCGGC | 1 cut(s) | 172 |
| NlaIV | GGNNCC | 5 cut(s) | 250, 769, 1000, 1048, 1201 |
| NmuCI | GTSAC | 3 cut(s) | 181, 754, 1502 |
| NsiI | ATGCAT | 1 cut(s) | 1500 |
| NspI | RCATGY | 2 cut(s) | 266, 1611 |
| PaeI | GCATGC | 1 cut(s) | 266 |
| PagI | TCATGA | 1 cut(s) | 735 |
| PciI | ACATGT | 1 cut(s) | 1607 |
| PciSI | GCTCTTC | 1 cut(s) | 587 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 148 |
| PctI | GAATGC | 2 cut(s) | 394, 795 |
| PdiI | GCCGGC | 1 cut(s) | 174 |
| PfeI | GAWTC | 1 cut(s) | 139 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 129, 323 |
| PkrI | GCNGC | 5 cut(s) | 565, 923, 1020, 1023, 1069 |
| Ppu21I | YACGTR | 1 cut(s) | 754 |
| PpuMI | RGGWCCY | 1 cut(s) | 1046 |
| PscI | ACATGT | 1 cut(s) | 1607 |
| PshBI | ATTAAT | 1 cut(s) | 465 |
| Psp124BI | GAGCTC | 1 cut(s) | 582 |
| Psp1406I | AACGTT | 2 cut(s) | 690, 1083 |
| Psp5II | RGGWCCY | 1 cut(s) | 1046 |
| Psp6I | CCWGG | 3 cut(s) | 414, 475, 1480 |
| PspFI | CCCAGC | 5 cut(s) | 530, 871, 943, 1203, 1524 |
| PspGI | CCWGG | 3 cut(s) | 414, 475, 1480 |
| PspN4I | GGNNCC | 5 cut(s) | 250, 769, 1000, 1048, 1201 |
| PspPI | GGNCC | 6 cut(s) | 162, 170, 299, 437, 479, 1046 |
| PspPPI | RGGWCCY | 1 cut(s) | 1046 |
| PstNI | CAGNNNCTG | 1 cut(s) | 398 |
| PsuI | RGATCY | 3 cut(s) | 394, 1512, 1597 |
| PvuII | CAGCTG | 1 cut(s) | 1207 |
| RsaI | GTAC | 3 cut(s) | 363, 806, 1234 |
| RsaNI | GTAC | 3 cut(s) | 362, 805, 1233 |
| RseI | CAYNNNNRTG | 2 cut(s) | 132, 1326 |
| SacI | GAGCTC | 1 cut(s) | 582 |
| SapI | GCTCTTC | 1 cut(s) | 587 |
| SaqAI | TTAA | 7 cut(s) | 90, 99, 465, 926, 1178, 1188, 1257 |
| SatI | GCNGC | 5 cut(s) | 564, 922, 1019, 1022, 1068 |
| Sau3AI | GATC | 7 cut(s) | 31, 152, 284, 394, 1167, 1512, 1597 |
| Sau96I | GGNCC | 6 cut(s) | 162, 170, 299, 437, 479, 1046 |
| ScrFI | CCNGG | 6 cut(s) | 157, 416, 477, 674, 675, 1482 |
| SduI | GDGCHC | 2 cut(s) | 582, 1204 |
| SinI | GGWCC | 3 cut(s) | 299, 479, 1046 |
| SmaI | CCCGGG | 1 cut(s) | 675 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 132, 1326 |
| SpeI | ACTAGT | 2 cut(s) | 1262, 1289 |
| SphI | GCATGC | 1 cut(s) | 266 |
| Sse9I | AATT | 4 cut(s) | 12, 1189, 1336, 1458 |
| SsiI | CCGC | 4 cut(s) | 741, 816, 919, 1446 |
| SspMI | CTAG | 7 cut(s) | 764, 800, 1263, 1290, 1469, 1521, 1553 |
| SstI | GAGCTC | 1 cut(s) | 582 |
| StyD4I | CCNGG | 6 cut(s) | 155, 414, 475, 672, 673, 1480 |
| StyI | CCWWGG | 1 cut(s) | 1042 |
| TaaI | ACNGT | 7 cut(s) | 212, 292, 299, 494, 939, 1429, 1593 |
| TaiI | ACGT | 4 cut(s) | 693, 756, 954, 1086 |
| TaqI | TCGA | 6 cut(s) | 142, 151, 618, 648, 774, 1371 |
| TasI | AATT | 4 cut(s) | 12, 1189, 1336, 1458 |
| TfiI | GAWTC | 1 cut(s) | 139 |
| Tru1I | TTAA | 7 cut(s) | 90, 99, 465, 926, 1178, 1188, 1257 |
| Tru9I | TTAA | 7 cut(s) | 90, 99, 465, 926, 1178, 1188, 1257 |
| TscAI | CASTG | 2 cut(s) | 843, 1111 |
| TseFI | GTSAC | 3 cut(s) | 181, 754, 1502 |
| TseI | GCWGC | 5 cut(s) | 563, 921, 1018, 1021, 1067 |
| Tsp45I | GTSAC | 3 cut(s) | 181, 754, 1502 |
| TspDTI | ATGAA | 4 cut(s) | 264, 1310, 1316, 1483 |
| TspGWI | ACGGA | 1 cut(s) | 1242 |
| TspMI | CCCGGG | 1 cut(s) | 673 |
| TspRI | CASTG | 2 cut(s) | 843, 1111 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 129, 323 |
| VpaK11BI | GGWCC | 3 cut(s) | 299, 479, 1046 |
| VspI | ATTAAT | 1 cut(s) | 465 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 59 |
| XbaI | TCTAGA | 1 cut(s) | 799 |
| XceI | RCATGY | 2 cut(s) | 266, 1611 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1049 |
| XmaI | CCCGGG | 1 cut(s) | 673 |
| XspI | CTAG | 7 cut(s) | 764, 800, 1263, 1290, 1469, 1521, 1553 |
| Zsp2I | ATGCAT | 1 cut(s) | 1500 |