Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000610

Physical Location & Seq

Genomic Coordinates Forward (+)

29823780 .. 29826764

Gene Structure 2985 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g34340.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGGTTTCTCTATTCTTTCATTGCAAGCATTTTTTAGGCTCTTTCTCTTATCTGTCCTAACTTTGTGTCTCAGTTCTGAGCTTGCAGCTGCAAGCATTACCAAGCACTACAAGTTTGAAATCAAACTGCAAAATGTCACAAGGTTGTGCCATACAAAGAGCATTGTAACAGTTAACGGGCAGTTTCCTGGACCTCGGATTGTAGCAAGGGAGGGCGACAATCTCCTTATTAAAGTGGTTAATCATGTCCCCAACAACATCTCCATTCATTGGCATGGAATTCGACAACTTCGTTCCGGATGGGCTGATGGACCTGCATACGTGACCCAATGCCCTATACAAACGGGTAACAGTTATGTATACAACTACACAATTGTAGGACAAAGAGGCACCCTTTGGTGGCATGCTCATCTTTCTTGGCTCAGATCAACTGTTTATGGTCCTCTAATCATTCTTCCAAAGCGCGGTGCTCCTTACCCGTTTATCAAACCCTACAAGGAAGTACCCATCATCTTTGGAGAGTGGTGGAATGCAGATCCAGAAGCAGTCATAAACCAGGCACTACAAACTGGTGGAGGTCCAAATGTCTCTGACGCCTATACCATCAATGGACTCCCAGGACCACTGTATAACTGTTCTGCTAAAGATACATTCAAGCTGAAGGTTCAAGCTGGGAAAACATATCTTCTTCGCCTAATCAACGGAGCGCTAAATGACGAGCTCTTCTTCAGCATTGCGAATCATACACTCAAAGTGGTCGAAACAGACGCCGTTTATGTTAAGCCCTTCAAGACCAACACCATTCTCATTACCCCGGGACAAACCACAAACGTTCTTCTCAAAACCAAACCCAACTTCCCAAATGCTACATTTCTCATGACTGCAAGGCCATACGTGACTGGTCTAGGCACATTTGACAACTCCACTGTTGCTGGCATTCTTGAGTACGAAGCAACCACACTTCACTCAACCCTCCCAATGAAGAAACTTCCCCTCCACAAACCAATCCTCCCAGCTCTAAACGACACATCGTTTGTGACAAAGTTCGTCAGCAAACTCCGCAGCTTGAACACTCCACAATTCCCAGCTAACGTCCCACAAAAAGTTGATAAGCATTTGTTCTTCACGGTAGGACTTGGATCCAACCCATGTAGCCAGCAGCAGAATAGCAACCAAACCTGCCAAGGGCCCAATGGAACCATGTTTGCTGCTTCAATCAACAACGTTTCTTTCACTATGCCAACCACTGCCCTACTCCAATCCCACTTCTCGGGCCAATCAAAAGGAGTCTATTCCTCCGACTTTCCGATCAGCCCTTTAACTCCGTTTAACTACACCGGACCTCCGCTGAACAATACTAACGTGGGAAATGGTACAAAGCTAATGGTGCTTCCTTTTAACACTAGCGTGGAGTTGGTGCTGCAAGGCACTAGCATTCTTGGTGCTGAAAGCCATCCTCTTCATCTCCATGGATTCAACTTCTTTGTTGTTGGTCAAGGATTTGGCAACTTTGACCAGAATAAGGACCCTAAAAAGTTCAATTTGGTCGATCCTGTTGAACGAAACACGGTTGGTGTGCCCTCCGGTGGGTGGGTTGCGATTCGATTCCTAGCTGATAATCCTGGTGTATGGTTCATGCATTGTCACCTGGAGGTCCATACGAGTTGGGGTTTGAAGATGGCATGGGTAGTGCTAGATGGAAAGCTTCCCAACCAGAAGCTGCTTCCTCCACCGTCAGATCTTCCGACATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

585

Amino Acids

64.36

Weight (kDa)

9.33

Isoelectric Point (pI)

27.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	42 - 154	2.2e-42	Multicopper oxidase
Cu-oxidase	PF00394	167 - 317	1.2e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	441 - 566	7.2e-42	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60020 AT5G60020 AT5G60020
fragaria_vesca	FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica	MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica	Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis	pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis	RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata	RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora	Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii	Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa	Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha	Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana	Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	322, 1187
AccB1I	GGYRCC	1 cut(s)	389
AccB7I	CCANNNNNTGG	1 cut(s)	270
AccI	GTMKAC	1 cut(s)	360
AccII	CGCG	1 cut(s)	465
AccIII	TCCGGA	1 cut(s)	296
AciI	CCGC	3 cut(s)	465, 1060, 1346
AclI	AACGTT	2 cut(s)	831, 1224
AclWI	GGATC	4 cut(s)	530, 1134, 1147, 1544
AcsI	RAATTY	1 cut(s)	279
AcuI	CTGAAG	2 cut(s)	680, 712
AcyI	GRCGYC	2 cut(s)	594, 768
AfaI	GTAC	3 cut(s)	504, 947, 1375
AfeI	AGCGCT	1 cut(s)	708
AfiI	CCNNNNNNNGG	9 cut(s)	270, 399, 464, 1185, 1270, 1522, 1586, 1587, 1590
AflIII	ACRYGT	1 cut(s)	1748
AjnI	CCWGG	5 cut(s)	187, 555, 616, 1621, 1647
AjuI	GAANNNNNNNTTGG	2 cut(s)	839, 871
AleI	CACNNNNGTG	1 cut(s)	1406
Alw21I	GWGCWC	2 cut(s)	472, 723
Alw26I	GTCTC	2 cut(s)	74, 592
AlwI	GGATC	4 cut(s)	530, 1134, 1147, 1544
AlwNI	CAGNNNCTG	1 cut(s)	1720
Ama87I	CYCGRG	2 cut(s)	814, 1270
Aor13HI	TCCGGA	1 cut(s)	296
Aor51HI	AGCGCT	1 cut(s)	708
AoxI	GGCC	3 cut(s)	887, 1187, 1273
ApaI	GGGCCC	1 cut(s)	1191
ApeKI	GCWGC	7 cut(s)	86, 89, 1062, 1159, 1208, 1420, 1720
ApoI	RAATTY	1 cut(s)	279
ArsI	GACNNNNNNTTYG	2 cut(s)	1016, 1048
AspLEI	GCGC	2 cut(s)	465, 709
AsuC2I	CCSGG	2 cut(s)	815, 816
AsuHPI	GGTGA	1 cut(s)	1637
AvaI	CYCGRG	2 cut(s)	814, 1270
AvaII	GGWCC	8 cut(s)	191, 311, 440, 578, 620, 1340, 1525, 1654
BaeGI	GKGCMC	2 cut(s)	1191, 1581
BamHI	GGATCC	1 cut(s)	1139
BanI	GGYRCC	1 cut(s)	389
BanII	GRGCYC	2 cut(s)	723, 1191
Bbv12I	GWGCWC	2 cut(s)	472, 723
BbvI	GCAGC	7 cut(s)	76, 98, 1074, 1171, 1195, 1407, 1707
BccI	CCATC	7 cut(s)	294, 302, 515, 611, 1461, 1672, 1691
BceAI	ACGGC	1 cut(s)	755
BcgI	CGANNNNNNTGC	2 cut(s)	263, 297
BciT130I	CCWGG	5 cut(s)	189, 557, 618, 1623, 1649
BcnI	CCSGG	2 cut(s)	815, 816
BcoDI	GTCTC	2 cut(s)	74, 592
BfaI	CTAG	5 cut(s)	905, 1404, 1431, 1610, 1694
BfoI	RGCGCY	1 cut(s)	710
BfuAI	ACCTGC	2 cut(s)	322, 1187
BglII	AGATCT	1 cut(s)	1738
BisI	GCNGC	7 cut(s)	87, 90, 1063, 1160, 1209, 1421, 1721
BlsI	GCNGC	7 cut(s)	88, 91, 1064, 1161, 1210, 1422, 1722
Bme1390I	CCNGG	7 cut(s)	189, 557, 618, 815, 816, 1623, 1649
Bme18I	GGWCC	8 cut(s)	191, 311, 440, 578, 620, 1340, 1525, 1654
BmeT110I	CYCGRG	2 cut(s)	814, 1270
BmiI	GGNNCC	5 cut(s)	391, 1141, 1189, 1198, 1527
BmrFI	CCNGG	7 cut(s)	189, 557, 618, 815, 816, 1623, 1649
BpmI	CTGGAG	1 cut(s)	1670
BpuEI	CTTGAG	1 cut(s)	962
BpuMI	CCSGG	2 cut(s)	815, 816
BsaAI	YACGTR	2 cut(s)	322, 895
BsaHI	GRCGYC	2 cut(s)	594, 768
BsaJI	CCNNGG	6 cut(s)	194, 616, 813, 814, 1183, 1468
BsaWI	WCCGGW	3 cut(s)	296, 1337, 1583
BsaXI	ACNNNNNCTCC	8 cut(s)	245, 275, 978, 993, 1008, 1023, 1327, 1357
Bsc4I	CCNNNNNNNGG	9 cut(s)	270, 399, 464, 1185, 1270, 1522, 1586, 1587, 1590
Bse1I	ACTGG	2 cut(s)	574, 904
Bse3DI	GCAATG	2 cut(s)	20, 732
BseAI	TCCGGA	1 cut(s)	296
BseBI	CCWGG	5 cut(s)	189, 557, 618, 1623, 1649
BseDI	CCNNGG	6 cut(s)	194, 616, 813, 814, 1183, 1468
BseGI	GGATG	2 cut(s)	305, 1453
BseLI	CCNNNNNNNGG	9 cut(s)	270, 399, 464, 1185, 1270, 1522, 1586, 1587, 1590
BseMI	GCAATG	2 cut(s)	20, 732
BseMII	CTCAG	3 cut(s)	69, 85, 436
BseNI	ACTGG	2 cut(s)	574, 904
BseSI	GKGCMC	2 cut(s)	1191, 1581
BseXI	GCAGC	7 cut(s)	76, 98, 1074, 1171, 1195, 1407, 1707
BseYI	CCCAGC	3 cut(s)	671, 1012, 1084
Bsh1236I	CGCG	1 cut(s)	465
BshFI	GGCC	3 cut(s)	889, 1189, 1275
BshNI	GGYRCC	1 cut(s)	389
BsiHKAI	GWGCWC	2 cut(s)	472, 723
BsiHKCI	CYCGRG	2 cut(s)	814, 1270
BsiSI	CCGG	4 cut(s)	297, 815, 1338, 1584
BslFI	GGGAC	3 cut(s)	233, 831, 1079
BslI	CCNNNNNNNGG	9 cut(s)	270, 399, 464, 1185, 1270, 1522, 1586, 1587, 1590
BsmAI	GTCTC	2 cut(s)	74, 592
BsmFI	GGGAC	3 cut(s)	233, 831, 1079
BsmI	GAATGC	3 cut(s)	535, 936, 1434
BsnI	GGCC	3 cut(s)	889, 1189, 1275
BsoBI	CYCGRG	2 cut(s)	814, 1270
Bsp120I	GGGCCC	1 cut(s)	1187
Bsp1286I	GDGCHC	4 cut(s)	472, 723, 1191, 1581
Bsp13I	TCCGGA	1 cut(s)	296
Bsp143I	GATC	6 cut(s)	425, 535, 1139, 1308, 1549, 1738
Bsp19I	CCATGG	1 cut(s)	1468
BspACI	CCGC	3 cut(s)	465, 1060, 1346
BspANI	GGCC	3 cut(s)	889, 1189, 1275
BspCNI	CTCAG	3 cut(s)	70, 84, 435
BspEI	TCCGGA	1 cut(s)	296
BspFNI	CGCG	1 cut(s)	465
BspHI	TCATGA	1 cut(s)	876
BspLI	GGNNCC	5 cut(s)	391, 1141, 1189, 1198, 1527
BspMI	ACCTGC	2 cut(s)	322, 1187
BspPI	GGATC	4 cut(s)	530, 1134, 1147, 1544
BspQI	GCTCTTC	1 cut(s)	728
BspT107I	GGYRCC	1 cut(s)	389
BsrDI	GCAATG	2 cut(s)	20, 732
BsrI	ACTGG	2 cut(s)	574, 904
BssECI	CCNNGG	6 cut(s)	194, 616, 813, 814, 1183, 1468
BssMI	GATC	6 cut(s)	425, 535, 1139, 1308, 1549, 1738
BssNAI	GTATAC	1 cut(s)	361
BssNI	GRCGYC	2 cut(s)	594, 768
BssT1I	CCWWGG	2 cut(s)	1183, 1468
Bst1107I	GTATAC	1 cut(s)	361
Bst2UI	CCWGG	5 cut(s)	189, 557, 618, 1623, 1649
Bst4CI	ACNGT	9 cut(s)	172, 353, 433, 627, 635, 928, 1129, 1570, 1734
Bst6I	CTCTTC	2 cut(s)	728, 1464
BstACI	GRCGYC	2 cut(s)	594, 768
BstBAI	YACGTR	2 cut(s)	322, 895
BstC8I	GCNNGC	6 cut(s)	27, 84, 94, 405, 934, 1157
BstDEI	CTNAG	3 cut(s)	71, 78, 422
BstDSI	CCRYGG	1 cut(s)	1468
BstF5I	GGATG	2 cut(s)	305, 1453
BstFNI	CGCG	1 cut(s)	465
BstH2I	RGCGCY	1 cut(s)	710
BstHHI	GCGC	2 cut(s)	465, 709
BstKTI	GATC	6 cut(s)	428, 538, 1142, 1311, 1552, 1741
BstMAI	GTCTC	2 cut(s)	74, 592
BstMBI	GATC	6 cut(s)	425, 535, 1139, 1308, 1549, 1738
BstMWI	GCNNNNNNNGC	2 cut(s)	1059, 1387
BstNI	CCWGG	5 cut(s)	189, 557, 618, 1623, 1649
BstNSI	RCATGY	2 cut(s)	407, 1752
BstSCI	CCNGG	7 cut(s)	187, 555, 616, 813, 814, 1621, 1647
BstSLI	GKGCMC	2 cut(s)	1191, 1581
BstUI	CGCG	1 cut(s)	465
BstV1I	GCAGC	7 cut(s)	76, 98, 1074, 1171, 1195, 1407, 1707
BstX2I	RGATCY	3 cut(s)	535, 1139, 1738
BstYI	RGATCY	3 cut(s)	535, 1139, 1738
BstZ17I	GTATAC	1 cut(s)	361
BsuRI	GGCC	3 cut(s)	889, 1189, 1275
BtgI	CCRYGG	1 cut(s)	1468
BtsCI	GGATG	2 cut(s)	305, 1453
BtsI	GCAGTG	1 cut(s)	1245
BtsIMutI	CAGTG	3 cut(s)	623, 924, 1245
BveI	ACCTGC	2 cut(s)	322, 1187
Cac8I	GCNNGC	6 cut(s)	27, 84, 94, 405, 934, 1157
CaiI	CAGNNNCTG	1 cut(s)	1720
CciI	TCATGA	1 cut(s)	876
CfoI	GCGC	2 cut(s)	465, 709
Cfr9I	CCCGGG	1 cut(s)	814
CseI	GACGC	2 cut(s)	602, 776
Csp6I	GTAC	3 cut(s)	503, 946, 1374
CviQI	GTAC	3 cut(s)	503, 946, 1374
DdeI	CTNAG	3 cut(s)	71, 78, 422
DpnI	GATC	6 cut(s)	427, 537, 1141, 1310, 1551, 1740
DpnII	GATC	6 cut(s)	425, 535, 1139, 1308, 1549, 1738
Eam1104I	CTCTTC	2 cut(s)	728, 1464
EarI	CTCTTC	2 cut(s)	728, 1464
Ecl136II	GAGCTC	1 cut(s)	721
Eco130I	CCWWGG	2 cut(s)	1183, 1468
Eco24I	GRGCYC	2 cut(s)	723, 1191
Eco47I	GGWCC	8 cut(s)	191, 311, 440, 578, 620, 1340, 1525, 1654
Eco47III	AGCGCT	1 cut(s)	708
Eco53kI	GAGCTC	1 cut(s)	721
Eco57I	CTGAAG	2 cut(s)	680, 712
Eco88I	CYCGRG	2 cut(s)	814, 1270
EcoICRI	GAGCTC	1 cut(s)	721
EcoO109I	RGGNCCY	2 cut(s)	1187, 1525
EcoRI	GAATTC	1 cut(s)	279
EcoRII	CCWGG	5 cut(s)	187, 555, 616, 1621, 1647
EcoT14I	CCWWGG	2 cut(s)	1183, 1468
EcoT22I	ATGCAT	1 cut(s)	1641
EcoT38I	GRGCYC	2 cut(s)	723, 1191
ErhI	CCWWGG	2 cut(s)	1183, 1468
FaqI	GGGAC	3 cut(s)	233, 831, 1079
FblI	GTMKAC	1 cut(s)	360
Fnu4HI	GCNGC	7 cut(s)	87, 90, 1063, 1160, 1209, 1421, 1721
FokI	GGATG	2 cut(s)	312, 1440
FriOI	GRGCYC	2 cut(s)	723, 1191
Fsp4HI	GCNGC	7 cut(s)	87, 90, 1063, 1160, 1209, 1421, 1721
FspBI	CTAG	5 cut(s)	905, 1404, 1431, 1610, 1694
GlaI	GCGC	2 cut(s)	464, 708
GluI	GCNGC	7 cut(s)	87, 90, 1063, 1160, 1209, 1421, 1721
GsaI	CCCAGC	3 cut(s)	675, 1016, 1088
GsuI	CTGGAG	1 cut(s)	1670
HaeII	RGCGCY	1 cut(s)	710
HaeIII	GGCC	3 cut(s)	889, 1189, 1275
HapII	CCGG	4 cut(s)	297, 815, 1338, 1584
HgaI	GACGC	2 cut(s)	602, 776
HhaI	GCGC	2 cut(s)	465, 709
Hin1I	GRCGYC	2 cut(s)	594, 768
Hin6I	GCGC	2 cut(s)	463, 707
HinP1I	GCGC	2 cut(s)	463, 707
HincII	GTYRAC	1 cut(s)	175
HindII	GTYRAC	1 cut(s)	175
HindIII	AAGCTT	1 cut(s)	1703
HinfI	GANTC	6 cut(s)	612, 739, 1287, 1473, 1600, 1605
HpaI	GTTAAC	1 cut(s)	175
HpaII	CCGG	4 cut(s)	297, 815, 1338, 1584
HphI	GGTGA	1 cut(s)	1637
Hpy166II	GTNNAC	2 cut(s)	175, 361
Hpy188I	TCNGA	8 cut(s)	79, 198, 425, 592, 1300, 1308, 1738, 1746
Hpy188III	TCNNGA	5 cut(s)	297, 539, 790, 877, 941
Hpy8I	GTNNAC	2 cut(s)	175, 361
HpyAV	CCTTC	2 cut(s)	655, 796
HpyCH4III	ACNGT	9 cut(s)	172, 353, 433, 627, 635, 928, 1129, 1570, 1734
HpyCH4IV	ACGT	6 cut(s)	321, 831, 894, 1092, 1224, 1362
HpyCH4V	TGCA	9 cut(s)	25, 86, 92, 130, 317, 533, 884, 1423, 1639
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1059, 1387
HpyF3I	CTNAG	3 cut(s)	71, 78, 422
HpySE526I	ACGT	6 cut(s)	321, 831, 894, 1092, 1224, 1362
Hsp92I	GRCGYC	2 cut(s)	594, 768
HspAI	GCGC	2 cut(s)	463, 707
Kpn2I	TCCGGA	1 cut(s)	296
KspAI	GTTAAC	1 cut(s)	175
Kzo9I	GATC	6 cut(s)	425, 535, 1139, 1308, 1549, 1738
LguI	GCTCTTC	1 cut(s)	728
LmnI	GCTCC	2 cut(s)	475, 704
Lsp1109I	GCAGC	7 cut(s)	76, 98, 1074, 1171, 1195, 1407, 1707
MaeI	CTAG	5 cut(s)	905, 1404, 1431, 1610, 1694
MaeII	ACGT	6 cut(s)	321, 831, 894, 1092, 1224, 1362
MaeIII	GTNAC	7 cut(s)	136, 166, 322, 347, 895, 1036, 1643
MalI	GATC	6 cut(s)	427, 537, 1141, 1310, 1551, 1740
MboI	GATC	6 cut(s)	425, 535, 1139, 1308, 1549, 1738
MfeI	CAATTG	1 cut(s)	372
MflI	RGATCY	3 cut(s)	535, 1139, 1738
MhlI	GDGCHC	4 cut(s)	472, 723, 1191, 1581
MluCI	AATT	4 cut(s)	279, 372, 1079, 1540
MlyI	GAGTC	2 cut(s)	606, 1296
MmeI	TCCRAC	2 cut(s)	1167, 1323
Mph1103I	ATGCAT	1 cut(s)	1641
MroI	TCCGGA	1 cut(s)	296
MseI	TTAA	7 cut(s)	174, 231, 240, 780, 1319, 1329, 1398
MslI	CAYNNNNRTG	3 cut(s)	273, 1406, 1467
MspA1I	CMGCKG	2 cut(s)	89, 1348
MspI	CCGG	4 cut(s)	297, 815, 1338, 1584
MspR9I	CCNGG	7 cut(s)	189, 557, 618, 815, 816, 1623, 1649
MunI	CAATTG	1 cut(s)	372
Mva1269I	GAATGC	3 cut(s)	535, 936, 1434
MvaI	CCWGG	5 cut(s)	189, 557, 618, 1623, 1649
MvnI	CGCG	1 cut(s)	465
MwoI	GCNNNNNNNGC	2 cut(s)	1059, 1387
NciI	CCSGG	2 cut(s)	815, 816
NcoI	CCATGG	1 cut(s)	1468
NdeII	GATC	6 cut(s)	425, 535, 1139, 1308, 1549, 1738
NlaIV	GGNNCC	5 cut(s)	391, 1141, 1189, 1198, 1527
NmuCI	GTSAC	5 cut(s)	136, 322, 895, 1036, 1643
NsiI	ATGCAT	1 cut(s)	1641
NspI	RCATGY	2 cut(s)	407, 1752
OliI	CACNNNNGTG	1 cut(s)	1406
PaeI	GCATGC	1 cut(s)	407
PagI	TCATGA	1 cut(s)	876
PciI	ACATGT	1 cut(s)	1748
PciSI	GCTCTTC	1 cut(s)	728
PcsI	WCGNNNNNNNCGW	1 cut(s)	289
PctI	GAATGC	3 cut(s)	535, 936, 1434
PfeI	GAWTC	4 cut(s)	739, 1473, 1600, 1605
PflMI	CCANNNNNTGG	1 cut(s)	270
PfoI	TCCNGGA	1 cut(s)	187
PkrI	GCNGC	7 cut(s)	88, 91, 1064, 1161, 1210, 1422, 1722
PleI	GAGTC	2 cut(s)	606, 1295
PpsI	GAGTC	2 cut(s)	606, 1295
Ppu21I	YACGTR	2 cut(s)	322, 895
PpuMI	RGGWCCY	1 cut(s)	1525
PscI	ACATGT	1 cut(s)	1748
Psp124BI	GAGCTC	1 cut(s)	723
Psp1406I	AACGTT	2 cut(s)	831, 1224
Psp5II	RGGWCCY	1 cut(s)	1525
Psp6I	CCWGG	5 cut(s)	187, 555, 616, 1621, 1647
PspFI	CCCAGC	3 cut(s)	671, 1012, 1084
PspGI	CCWGG	5 cut(s)	187, 555, 616, 1621, 1647
PspN4I	GGNNCC	5 cut(s)	391, 1141, 1189, 1198, 1527
PspOMI	GGGCCC	1 cut(s)	1187
PspPPI	RGGWCCY	1 cut(s)	1525
PstNI	CAGNNNCTG	1 cut(s)	1720
PsuI	RGATCY	3 cut(s)	535, 1139, 1738
PvuII	CAGCTG	1 cut(s)	89
RsaI	GTAC	3 cut(s)	504, 947, 1375
RsaNI	GTAC	3 cut(s)	503, 946, 1374
RseI	CAYNNNNRTG	3 cut(s)	273, 1406, 1467
SacI	GAGCTC	1 cut(s)	723
SapI	GCTCTTC	1 cut(s)	728
SaqAI	TTAA	7 cut(s)	174, 231, 240, 780, 1319, 1329, 1398
SatI	GCNGC	7 cut(s)	87, 90, 1063, 1160, 1209, 1421, 1721
Sau3AI	GATC	6 cut(s)	425, 535, 1139, 1308, 1549, 1738
SchI	GAGTC	2 cut(s)	606, 1296
ScrFI	CCNGG	7 cut(s)	189, 557, 618, 815, 816, 1623, 1649
SduI	GDGCHC	4 cut(s)	472, 723, 1191, 1581
SinI	GGWCC	8 cut(s)	191, 311, 440, 578, 620, 1340, 1525, 1654
SmaI	CCCGGG	1 cut(s)	816
SmiMI	CAYNNNNRTG	3 cut(s)	273, 1406, 1467
SmlI	CTYRAG	1 cut(s)	941
SmoI	CTYRAG	1 cut(s)	941
SphI	GCATGC	1 cut(s)	407
Sse9I	AATT	4 cut(s)	279, 372, 1079, 1540
SsiI	CCGC	3 cut(s)	465, 1060, 1346
SspMI	CTAG	5 cut(s)	905, 1404, 1431, 1610, 1694
SstI	GAGCTC	1 cut(s)	723
StyD4I	CCNGG	7 cut(s)	187, 555, 616, 813, 814, 1621, 1647
StyI	CCWWGG	2 cut(s)	1183, 1468
TaaI	ACNGT	9 cut(s)	172, 353, 433, 627, 635, 928, 1129, 1570, 1734
TaiI	ACGT	6 cut(s)	324, 834, 897, 1095, 1227, 1365
TaqI	TCGA	4 cut(s)	283, 759, 1548, 1603
TasI	AATT	4 cut(s)	279, 372, 1079, 1540
TfiI	GAWTC	4 cut(s)	739, 1473, 1600, 1605
Tru1I	TTAA	7 cut(s)	174, 231, 240, 780, 1319, 1329, 1398
Tru9I	TTAA	7 cut(s)	174, 231, 240, 780, 1319, 1329, 1398
TscAI	CASTG	3 cut(s)	630, 931, 1252
TseFI	GTSAC	5 cut(s)	136, 322, 895, 1036, 1643
TseI	GCWGC	7 cut(s)	86, 89, 1062, 1159, 1208, 1420, 1720
Tsp45I	GTSAC	5 cut(s)	136, 322, 895, 1036, 1643
TspDTI	ATGAA	5 cut(s)	9, 257, 995, 1451, 1624
TspGWI	ACGGA	2 cut(s)	717, 1314
TspMI	CCCGGG	1 cut(s)	814
TspRI	CASTG	3 cut(s)	630, 931, 1252
Van91I	CCANNNNNTGG	1 cut(s)	270
VpaK11BI	GGWCC	8 cut(s)	191, 311, 440, 578, 620, 1340, 1525, 1654
XapI	RAATTY	1 cut(s)	279
XceI	RCATGY	2 cut(s)	407, 1752
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1190
XmaI	CCCGGG	1 cut(s)	814
XmiI	GTMKAC	1 cut(s)	360
XspI	CTAG	5 cut(s)	905, 1404, 1431, 1610, 1694
Zsp2I	ATGCAT	1 cut(s)	1641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.