Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000610

Physical Location & Seq

Genomic Coordinates Forward (+)

67379005 .. 67386341

Gene Structure 7337 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G038140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGGCAGCAACCCGACCTGCAACTGCAGGTTTTCTGGGCAGCCCTCCAACGACATCGCCGGCGACTCCACTGACTGCAGACGGCTCCGCCCGACCCCTGGCATCAAACTGCAAAATATCACGAGGTTGTGCCATACAAAGAGCGTTGTAACAGTTAATGGGCAGTTTCCCGGTCCTCGGATTGTAGCAAGGGAGGGCGATAATCTCCTTATTAAAGTGGTTAATCATGTCCACAATAACATCTCCATCCATTGGCACGGGATTCGACAACTTCGATCCGGGTGGGCCGATGGGCCGGCATATGTGACCCAATGTCCTATACAAACAGGTAACAGTTATGTGTACAACTACACGATTGTAGGACAAAGAGGCACCCTTTGGTGGCATGCTCATATTTCATGGCTCAGATCAACCGTCTACGGTCCTCTAATTATTCTTCCAAAGCGTGGTGTTCCTTACCCATTTATCAAGCCCTACAAGGAAGTAGGAGATTGGTGGAATGCAGATCCTGAAGCAGTCATAAACAAGGCACTAAAAATTGGTGGAGGCCCAAATGTCTCAGACGCCTATACCATTAATGGACTGCCAGGACCATTGTATAACTGTTCGGCCAAAGATACTTTCAAGCTGAAGGTTCAAGCTGGGAAAACATACCTTCTTCGCCTAATCAATGCAACACTAAATGACGAGCTCTTCTTCAGCATTGCAAATCATACCCTCAAAGTGGTCGAAACAGACGCCGTTTATGTCAAGCCCTTCGACACCAACACCATTCTCATTGCCCTGGGACAAACCACAAACGTTCTTCTCAAAACCAAACCCAACTTCCCAAATGCTACATTTCTCATGACCGCAAGGCCATATGTGACTGGTCTAGGCACCTTCGACAACTCCACTCTTGCTGGCATTCTAGAGTTCGAAACGACCGCATTTCACTCAAACCTCCCACTGAACAAACTTCCACTCCACAAACCAACTCTGCCAGCTCTAAATGACACACGTTTGCAACAAACTAACGTCCCACAAAAAGTTGACAAGCGTTTGTTCTTCACAATAGGACTTGGAACTAGCCCATGTAGCCAGCAGCAGCACAACAACCAAACTTGCCAAGGACCCAATGGAACTATGTTTGGTGCTTCAATCAACAACGTTTCTTTTACTATGCCAAACATTGCCTTACTCCAATCCCACTTCTCTGGCCAATCAAAGAGGGTCTATTCCCCTGACTTTCCGATCAGTCCTTTAACTCCATTTAATTACACGGGAGCCCAACTGAACAATATTAATGTGGGCAATGGTACAAAGCTAATGGTGCTTCCGTTTAATACTAGAGTGGAGTTGGTGTTGCAGGACACTAGTATTCCTGGTGCTGAAAGTCATCCTCTTCATCTTCATGGGTTCAATTTCTTTGTTGTTGGTCAAGGGTTTGGGAACTTCGACCAAAACAAAGACCCTAAGAAGTTCAATCTGGTTGACCCTGTTGAAAGAAACACCATAGGTGTTCCCTCTGGCGGGTGGGTTGCAATTCGTTTCCTAGCAGACAACCTTGGTGTATGGTTCATGCATTGTCACTTGGAGATCCATACTAGCTGGGGCTTGAAGATGGCATGGGTAGTGCTAGATGGAAAATTTCCCAACCAGAAGTTGCTTCCTCCACTGTCAGATCTTCCCACATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

559

Amino Acids

61.87

Weight (kDa)

9.26

Isoelectric Point (pI)

33.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 148	3.3e-42	Multicopper oxidase
Cu-oxidase	PF00394	162 - 305	2.7e-39	Multicopper oxidase
Cu-oxidase_2	PF07731	412 - 541	1.5e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60020 AT5G60020 AT5G60020
fragaria_vesca	FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica	MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica	Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis	pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis	RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata	RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora	Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii	Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa	Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha	Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana	Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	18, 26
AccB1I	GGYRCC	2 cut(s)	371, 878
AccB7I	CCANNNNNTGG	2 cut(s)	252, 446
AccI	GTMKAC	1 cut(s)	417
AciI	CCGC	4 cut(s)	88, 852, 927, 1512
AclI	AACGTT	2 cut(s)	801, 1149
AclWI	GGATC	3 cut(s)	270, 500, 1573
AcoI	YGGCCR	2 cut(s)	609, 1198
AcsI	RAATTY	1 cut(s)	1628
AcuI	CTGAAG	3 cut(s)	531, 650, 682
AcyI	GRCGYC	2 cut(s)	564, 738
AfaI	GTAC	2 cut(s)	344, 1300
AfiI	CCNNNNNNNGG	8 cut(s)	98, 177, 252, 381, 446, 724, 1511, 1512
AflIII	ACRYGT	2 cut(s)	998, 1673
AgsI	TTSAA	7 cut(s)	625, 638, 1140, 1402, 1465, 1484, 1600
AhdI	GACNNNNNGTC	1 cut(s)	312
AhlI	ACTAGT	1 cut(s)	1355
AjnI	CCWGG	4 cut(s)	97, 586, 783, 1363
AjuI	GAANNNNNNNTTGG	4 cut(s)	605, 637, 809, 841
AluBI	AGCT	6 cut(s)	628, 641, 691, 986, 1306, 1590
AluI	AGCT	6 cut(s)	628, 641, 691, 986, 1306, 1590
Alw21I	GWGCWC	1 cut(s)	693
Alw26I	GTCTC	1 cut(s)	562
AlwI	GGATC	3 cut(s)	270, 500, 1573
AlwNI	CAGNNNCTG	1 cut(s)	509
AoxI	GGCC	6 cut(s)	285, 293, 547, 609, 857, 1198
ApeKI	GCWGC	4 cut(s)	6, 40, 1084, 1087
ApoI	RAATTY	1 cut(s)	1628
AseI	ATTAAT	2 cut(s)	576, 1284
AspS9I	GGNCC	7 cut(s)	173, 285, 293, 422, 548, 590, 1112
AsuC2I	CCSGG	2 cut(s)	171, 280
AsuII	TTCGAA	1 cut(s)	918
AvaII	GGWCC	4 cut(s)	173, 422, 590, 1112
BalI	TGGCCA	1 cut(s)	1200
BanI	GGYRCC	2 cut(s)	371, 878
BanII	GRGCYC	2 cut(s)	693, 1270
BauI	CACGAG	1 cut(s)	121
Bbv12I	GWGCWC	1 cut(s)	693
BbvI	GCAGC	4 cut(s)	18, 52, 1096, 1099
BccI	CCATC	4 cut(s)	254, 284, 1597, 1616
BceAI	ACGGC	2 cut(s)	98, 725
BcgI	CGANNNNNNTGC	2 cut(s)	245, 279
BciT130I	CCWGG	4 cut(s)	99, 588, 785, 1365
BcnI	CCSGG	2 cut(s)	171, 280
BcoDI	GTCTC	1 cut(s)	562
BcuI	ACTAGT	1 cut(s)	1355
BfaI	CTAG	8 cut(s)	875, 911, 1068, 1329, 1356, 1535, 1587, 1619
BfmI	CTRYAG	2 cut(s)	25, 76
BfuAI	ACCTGC	2 cut(s)	18, 26
BglII	AGATCT	1 cut(s)	1663
BisI	GCNGC	4 cut(s)	7, 41, 1085, 1088
BlsI	GCNGC	4 cut(s)	8, 42, 1086, 1089
Bme1390I	CCNGG	6 cut(s)	99, 171, 280, 588, 785, 1365
Bme18I	GGWCC	4 cut(s)	173, 422, 590, 1112
BmeRI	GACNNNNNGTC	1 cut(s)	312
BmgT120I	GGNCC	7 cut(s)	173, 285, 293, 422, 548, 590, 1112
BmiI	GGNNCC	5 cut(s)	86, 373, 880, 1114, 1267
BmrFI	CCNGG	6 cut(s)	99, 171, 280, 588, 785, 1365
BmsI	GCATC	1 cut(s)	111
Bpu14I	TTCGAA	1 cut(s)	918
BpuMI	CCSGG	2 cut(s)	171, 280
BsaHI	GRCGYC	2 cut(s)	564, 738
BsaJI	CCNNGG	6 cut(s)	97, 176, 783, 784, 1108, 1546
BsaXI	ACNNNNNCTCC	4 cut(s)	948, 978, 1328, 1358
Bsc4I	CCNNNNNNNGG	8 cut(s)	98, 177, 252, 381, 446, 724, 1511, 1512
Bse118I	RCCGGY	2 cut(s)	59, 295
Bse1I	ACTGG	1 cut(s)	874
Bse3DI	GCAATG	4 cut(s)	702, 777, 1170, 1300
BseBI	CCWGG	4 cut(s)	99, 588, 785, 1365
BseDI	CCNNGG	6 cut(s)	97, 176, 783, 784, 1108, 1546
BseGI	GGATG	2 cut(s)	246, 1378
BseLI	CCNNNNNNNGG	8 cut(s)	98, 177, 252, 381, 446, 724, 1511, 1512
BseMI	GCAATG	4 cut(s)	702, 777, 1170, 1300
BseMII	CTCAG	2 cut(s)	418, 573
BseNI	ACTGG	1 cut(s)	874
BseXI	GCAGC	4 cut(s)	18, 52, 1096, 1099
BseYI	CCCAGC	2 cut(s)	641, 1590
Bsh1285I	CGRYCG	1 cut(s)	927
BshFI	GGCC	6 cut(s)	287, 295, 549, 611, 859, 1200
BshNI	GGYRCC	2 cut(s)	371, 878
BsiEI	CGRYCG	1 cut(s)	927
BsiHKAI	GWGCWC	1 cut(s)	693
BsiSI	CCGG	4 cut(s)	60, 171, 279, 296
BslFI	GGGAC	2 cut(s)	801, 1004
BslI	CCNNNNNNNGG	8 cut(s)	98, 177, 252, 381, 446, 724, 1511, 1512
BsmAI	GTCTC	1 cut(s)	562
BsmFI	GGGAC	2 cut(s)	801, 1004
BsmI	GAATGC	2 cut(s)	505, 906
BsnI	GGCC	6 cut(s)	287, 295, 549, 611, 859, 1200
Bsp119I	TTCGAA	1 cut(s)	918
Bsp1286I	GDGCHC	2 cut(s)	693, 1270
Bsp1407I	TGTACA	1 cut(s)	342
Bsp143I	GATC	6 cut(s)	275, 407, 505, 1233, 1578, 1663
BspACI	CCGC	4 cut(s)	88, 852, 927, 1512
BspANI	GGCC	6 cut(s)	287, 295, 549, 611, 859, 1200
BspCNI	CTCAG	2 cut(s)	417, 572
BspHI	TCATGA	1 cut(s)	846
BspLI	GGNNCC	5 cut(s)	86, 373, 880, 1114, 1267
BspMAI	CTGCAG	2 cut(s)	29, 80
BspMI	ACCTGC	2 cut(s)	18, 26
BspPI	GGATC	3 cut(s)	270, 500, 1573
BspQI	GCTCTTC	1 cut(s)	698
BspT104I	TTCGAA	1 cut(s)	918
BspT107I	GGYRCC	2 cut(s)	371, 878
BsrDI	GCAATG	4 cut(s)	702, 777, 1170, 1300
BsrFI	RCCGGY	2 cut(s)	59, 295
BsrGI	TGTACA	1 cut(s)	342
BsrI	ACTGG	1 cut(s)	874
BssAI	RCCGGY	2 cut(s)	59, 295
BssECI	CCNNGG	6 cut(s)	97, 176, 783, 784, 1108, 1546
BssMI	GATC	6 cut(s)	275, 407, 505, 1233, 1578, 1663
BssNI	GRCGYC	2 cut(s)	564, 738
BssSI	CACGAG	1 cut(s)	121
BssT1I	CCWWGG	2 cut(s)	1108, 1546
Bst2BI	CACGAG	1 cut(s)	121
Bst2UI	CCWGG	4 cut(s)	99, 588, 785, 1365
Bst4CI	ACNGT	6 cut(s)	154, 335, 415, 422, 605, 1659
Bst6I	CTCTTC	2 cut(s)	698, 1389
BstACI	GRCGYC	2 cut(s)	564, 738
BstAUI	TGTACA	1 cut(s)	342
BstBI	TTCGAA	1 cut(s)	918
BstC8I	GCNNGC	6 cut(s)	61, 297, 387, 904, 984, 1082
BstDEI	CTNAG	3 cut(s)	404, 559, 1455
BstF5I	GGATG	2 cut(s)	246, 1378
BstKTI	GATC	6 cut(s)	278, 410, 508, 1236, 1581, 1666
BstMAI	GTCTC	1 cut(s)	562
BstMBI	GATC	6 cut(s)	275, 407, 505, 1233, 1578, 1663
BstMCI	CGRYCG	1 cut(s)	927
BstMWI	GCNNNNNNNGC	2 cut(s)	1077, 1312
BstNI	CCWGG	4 cut(s)	99, 588, 785, 1365
BstNSI	RCATGY	2 cut(s)	389, 1677
BstSCI	CCNGG	6 cut(s)	97, 169, 278, 586, 783, 1363
BstSFI	CTRYAG	2 cut(s)	25, 76
BstV1I	GCAGC	4 cut(s)	18, 52, 1096, 1099
BstX2I	RGATCY	3 cut(s)	505, 1578, 1663
BstXI	CCANNNNNNTGG	1 cut(s)	1196
BstYI	RGATCY	3 cut(s)	505, 1578, 1663
BsuRI	GGCC	6 cut(s)	287, 295, 549, 611, 859, 1200
BtgZI	GCGATG	1 cut(s)	40
BtsCI	GGATG	2 cut(s)	246, 1378
BtsIMutI	CAGTG	3 cut(s)	69, 947, 1655
BveI	ACCTGC	2 cut(s)	18, 26
Cac8I	GCNNGC	6 cut(s)	61, 297, 387, 904, 984, 1082
CaiI	CAGNNNCTG	1 cut(s)	509
CciI	TCATGA	1 cut(s)	846
Cfr10I	RCCGGY	2 cut(s)	59, 295
Cfr13I	GGNCC	7 cut(s)	173, 285, 293, 422, 548, 590, 1112
CseI	GACGC	2 cut(s)	572, 746
Csp6I	GTAC	2 cut(s)	343, 1299
CviAII	CATG	9 cut(s)	227, 386, 399, 847, 1074, 1394, 1561, 1608, 1674
CviQI	GTAC	2 cut(s)	343, 1299
DdeI	CTNAG	3 cut(s)	404, 559, 1455
DpnI	GATC	6 cut(s)	277, 409, 507, 1235, 1580, 1665
DpnII	GATC	6 cut(s)	275, 407, 505, 1233, 1578, 1663
DriI	GACNNNNNGTC	1 cut(s)	312
EaeI	YGGCCR	2 cut(s)	609, 1198
Eam1104I	CTCTTC	2 cut(s)	698, 1389
Eam1105I	GACNNNNNGTC	1 cut(s)	312
EarI	CTCTTC	2 cut(s)	698, 1389
EciI	GGCGGA	1 cut(s)	77
Ecl136II	GAGCTC	1 cut(s)	691
Eco130I	CCWWGG	2 cut(s)	1108, 1546
Eco24I	GRGCYC	2 cut(s)	693, 1270
Eco47I	GGWCC	4 cut(s)	173, 422, 590, 1112
Eco53kI	GAGCTC	1 cut(s)	691
Eco57I	CTGAAG	3 cut(s)	531, 650, 682
EcoICRI	GAGCTC	1 cut(s)	691
EcoO109I	RGGNCCY	1 cut(s)	1112
EcoRII	CCWGG	4 cut(s)	97, 586, 783, 1363
EcoT14I	CCWWGG	2 cut(s)	1108, 1546
EcoT22I	ATGCAT	1 cut(s)	1566
EcoT38I	GRGCYC	2 cut(s)	693, 1270
ErhI	CCWWGG	2 cut(s)	1108, 1546
FaeI	CATG	9 cut(s)	230, 389, 402, 850, 1077, 1397, 1564, 1611, 1677
FaqI	GGGAC	2 cut(s)	801, 1004
FatI	CATG	9 cut(s)	226, 385, 398, 846, 1073, 1393, 1560, 1607, 1673
FauI	CCCGC	1 cut(s)	1505
FauNDI	CATATG	2 cut(s)	301, 862
FblI	GTMKAC	1 cut(s)	417
Fnu4HI	GCNGC	4 cut(s)	7, 41, 1085, 1088
FokI	GGATG	2 cut(s)	233, 1365
FriOI	GRGCYC	2 cut(s)	693, 1270
Fsp4HI	GCNGC	4 cut(s)	7, 41, 1085, 1088
FspBI	CTAG	8 cut(s)	875, 911, 1068, 1329, 1356, 1535, 1587, 1619
GluI	GCNGC	4 cut(s)	7, 41, 1085, 1088
GsaI	CCCAGC	2 cut(s)	645, 1594
HaeIII	GGCC	6 cut(s)	287, 295, 549, 611, 859, 1200
HapII	CCGG	4 cut(s)	60, 171, 279, 296
HgaI	GACGC	2 cut(s)	572, 746
Hin1I	GRCGYC	2 cut(s)	564, 738
Hin1II	CATG	9 cut(s)	230, 389, 402, 850, 1077, 1397, 1564, 1611, 1677
HincII	GTYRAC	2 cut(s)	1033, 1474
HindII	GTYRAC	2 cut(s)	1033, 1474
HinfI	GANTC	2 cut(s)	65, 262
HpaII	CCGG	4 cut(s)	60, 171, 279, 296
Hpy166II	GTNNAC	5 cut(s)	232, 343, 418, 1033, 1474
Hpy188I	TCNGA	5 cut(s)	180, 407, 562, 1233, 1663
Hpy188III	TCNNGA	4 cut(s)	121, 509, 847, 911
Hpy8I	GTNNAC	5 cut(s)	232, 343, 418, 1033, 1474
HpyAV	CCTTC	4 cut(s)	625, 665, 766, 892
HpyCH4III	ACNGT	6 cut(s)	154, 335, 415, 422, 605, 1659
HpyCH4IV	ACGT	4 cut(s)	801, 1000, 1017, 1149
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1077, 1312
HpyF3I	CTNAG	3 cut(s)	404, 559, 1455
HpySE526I	ACGT	4 cut(s)	801, 1000, 1017, 1149
Hsp92I	GRCGYC	2 cut(s)	564, 738
Hsp92II	CATG	9 cut(s)	230, 389, 402, 850, 1077, 1397, 1564, 1611, 1677
KroI	GCCGGC	2 cut(s)	59, 295
KroNI	GCCGGC	2 cut(s)	61, 297
Kzo9I	GATC	6 cut(s)	275, 407, 505, 1233, 1578, 1663
LguI	GCTCTTC	1 cut(s)	698
LmnI	GCTCC	2 cut(s)	90, 1265
Lsp1109I	GCAGC	4 cut(s)	18, 52, 1096, 1099
LweI	GCATC	1 cut(s)	111
MaeI	CTAG	8 cut(s)	875, 911, 1068, 1329, 1356, 1535, 1587, 1619
MaeII	ACGT	4 cut(s)	801, 1000, 1017, 1149
MaeIII	GTNAC	5 cut(s)	148, 304, 329, 865, 1568
MalI	GATC	6 cut(s)	277, 409, 507, 1235, 1580, 1665
MboI	GATC	6 cut(s)	275, 407, 505, 1233, 1578, 1663
MflI	RGATCY	3 cut(s)	505, 1578, 1663
MhlI	GDGCHC	2 cut(s)	693, 1270
MlsI	TGGCCA	1 cut(s)	1200
MluCI	AATT	6 cut(s)	429, 537, 1255, 1402, 1524, 1628
MluNI	TGGCCA	1 cut(s)	1200
MlyI	GAGTC	1 cut(s)	59
MmeI	TCCRAC	1 cut(s)	72
Mox20I	TGGCCA	1 cut(s)	1200
Mph1103I	ATGCAT	1 cut(s)	1566
MreI	CGCCGGCG	1 cut(s)	59
MroNI	GCCGGC	2 cut(s)	59, 295
MscI	TGGCCA	1 cut(s)	1200
MseI	TTAA	8 cut(s)	156, 213, 222, 576, 1244, 1254, 1284, 1323
MslI	CAYNNNNRTG	1 cut(s)	1392
Msp20I	TGGCCA	1 cut(s)	1200
MspI	CCGG	4 cut(s)	60, 171, 279, 296
MspR9I	CCNGG	6 cut(s)	99, 171, 280, 588, 785, 1365
Mva1269I	GAATGC	2 cut(s)	505, 906
MvaI	CCWGG	4 cut(s)	99, 588, 785, 1365
MwoI	GCNNNNNNNGC	2 cut(s)	1077, 1312
NaeI	GCCGGC	2 cut(s)	61, 297
NciI	CCSGG	2 cut(s)	171, 280
NdeI	CATATG	2 cut(s)	301, 862
NdeII	GATC	6 cut(s)	275, 407, 505, 1233, 1578, 1663
NgoMIV	GCCGGC	2 cut(s)	59, 295
NlaIII	CATG	9 cut(s)	230, 389, 402, 850, 1077, 1397, 1564, 1611, 1677
NlaIV	GGNNCC	5 cut(s)	86, 373, 880, 1114, 1267
NmuCI	GTSAC	3 cut(s)	304, 865, 1568
NsiI	ATGCAT	1 cut(s)	1566
NspI	RCATGY	2 cut(s)	389, 1677
NspV	TTCGAA	1 cut(s)	918
PaeI	GCATGC	1 cut(s)	389
PagI	TCATGA	1 cut(s)	846
PasI	CCCWGGG	1 cut(s)	784
PciI	ACATGT	1 cut(s)	1673
PciSI	GCTCTTC	1 cut(s)	698
PcsI	WCGNNNNNNNCGW	1 cut(s)	271
PctI	GAATGC	2 cut(s)	505, 906
PdiI	GCCGGC	2 cut(s)	61, 297
PfeI	GAWTC	1 cut(s)	262
PflMI	CCANNNNNTGG	2 cut(s)	252, 446
PkrI	GCNGC	4 cut(s)	8, 42, 1086, 1089
PleI	GAGTC	1 cut(s)	59
PpsI	GAGTC	1 cut(s)	59
PpuMI	RGGWCCY	1 cut(s)	1112
PscI	ACATGT	1 cut(s)	1673
PshBI	ATTAAT	2 cut(s)	576, 1284
Psp124BI	GAGCTC	1 cut(s)	693
Psp1406I	AACGTT	2 cut(s)	801, 1149
Psp5II	RGGWCCY	1 cut(s)	1112
Psp6I	CCWGG	4 cut(s)	97, 586, 783, 1363
PspFI	CCCAGC	2 cut(s)	641, 1590
PspGI	CCWGG	4 cut(s)	97, 586, 783, 1363
PspN4I	GGNNCC	5 cut(s)	86, 373, 880, 1114, 1267
PspPI	GGNCC	7 cut(s)	173, 285, 293, 422, 548, 590, 1112
PspPPI	RGGWCCY	1 cut(s)	1112
PstI	CTGCAG	2 cut(s)	29, 80
PstNI	CAGNNNCTG	1 cut(s)	509
PsuI	RGATCY	3 cut(s)	505, 1578, 1663
RsaI	GTAC	2 cut(s)	344, 1300
RsaNI	GTAC	2 cut(s)	343, 1299
RseI	CAYNNNNRTG	1 cut(s)	1392
SacI	GAGCTC	1 cut(s)	693
SapI	GCTCTTC	1 cut(s)	698
SaqAI	TTAA	8 cut(s)	156, 213, 222, 576, 1244, 1254, 1284, 1323
SatI	GCNGC	4 cut(s)	7, 41, 1085, 1088
Sau3AI	GATC	6 cut(s)	275, 407, 505, 1233, 1578, 1663
Sau96I	GGNCC	7 cut(s)	173, 285, 293, 422, 548, 590, 1112
SchI	GAGTC	1 cut(s)	59
ScrFI	CCNGG	6 cut(s)	99, 171, 280, 588, 785, 1365
SduI	GDGCHC	2 cut(s)	693, 1270
SfaNI	GCATC	1 cut(s)	111
SfcI	CTRYAG	2 cut(s)	25, 76
SfuI	TTCGAA	1 cut(s)	918
SgrAI	CRCCGGYG	1 cut(s)	59
SinI	GGWCC	4 cut(s)	173, 422, 590, 1112
SmiMI	CAYNNNNRTG	1 cut(s)	1392
SpeI	ACTAGT	1 cut(s)	1355
SphI	GCATGC	1 cut(s)	389
Sse9I	AATT	6 cut(s)	429, 537, 1255, 1402, 1524, 1628
SsiI	CCGC	4 cut(s)	88, 852, 927, 1512
SspI	AATATT	1 cut(s)	1282
SspMI	CTAG	8 cut(s)	875, 911, 1068, 1329, 1356, 1535, 1587, 1619
SstI	GAGCTC	1 cut(s)	693
StyD4I	CCNGG	6 cut(s)	97, 169, 278, 586, 783, 1363
StyI	CCWWGG	2 cut(s)	1108, 1546
TaaI	ACNGT	6 cut(s)	154, 335, 415, 422, 605, 1659
TaiI	ACGT	4 cut(s)	804, 1003, 1020, 1152
TaqI	TCGA	7 cut(s)	265, 274, 729, 759, 885, 918, 1437
TasI	AATT	6 cut(s)	429, 537, 1255, 1402, 1524, 1628
TatI	WGTACW	1 cut(s)	342
TfiI	GAWTC	1 cut(s)	262
Tru1I	TTAA	8 cut(s)	156, 213, 222, 576, 1244, 1254, 1284, 1323
Tru9I	TTAA	8 cut(s)	156, 213, 222, 576, 1244, 1254, 1284, 1323
TscAI	CASTG	3 cut(s)	76, 954, 1662
TseFI	GTSAC	3 cut(s)	304, 865, 1568
TseI	GCWGC	4 cut(s)	6, 40, 1084, 1087
Tsp45I	GTSAC	3 cut(s)	304, 865, 1568
TspDTI	ATGAA	4 cut(s)	387, 1376, 1382, 1549
TspGWI	ACGGA	1 cut(s)	1308
TspRI	CASTG	3 cut(s)	76, 954, 1662
Van91I	CCANNNNNTGG	2 cut(s)	252, 446
VpaK11BI	GGWCC	4 cut(s)	173, 422, 590, 1112
VspI	ATTAAT	2 cut(s)	576, 1284
XapI	RAATTY	1 cut(s)	1628
XbaI	TCTAGA	1 cut(s)	910
XceI	RCATGY	2 cut(s)	389, 1677
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1115
XmiI	GTMKAC	1 cut(s)	417
XspI	CTAG	8 cut(s)	875, 911, 1068, 1329, 1356, 1535, 1587, 1619
Zsp2I	ATGCAT	1 cut(s)	1566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.