RchiOBHm_Chr3g0466271

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000610
Physical Location & Seq
Forward (+)
12760185 .. 12762680
2496 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43236

Sequence Viewer

Length: 1770 bp
ATGGGTTCTAGTCTTCCTGCATCACCAGCATTGTCAATGGCTATGATCTTCTTTGCGATTTGCACGTTCTTTTGTGTACTACCGGAGCTAGCAGTGGCAAAGCATGCACGGGTTACCAGGCACTACAAGTTTAATATCAAGTCTCAAAGTGTGACGAGACTTTGTAAAACGAAGAGCATTATAACCGTGAATGGGCAGTTTCCGGGGCCTAGAATCATAGCAAGGGAAGGTGACAGGCTAGTGATCAAGGTGGTCAATCATGTTCAAAACAATGTCACTCTCCACTGGCATGGAATTAGGCAATTAAGGAGTGGATGGGCAGATGGACCTTCATATATAACTCAGTGCCCAATTCAGACAGGGCAGAGTTATGTGTATAACTTCACCATCATTGGCCAGAGAGGCACATTGTGGTGGCATGCACACATCTCTTGGCTTAGGGCAACCCTATATGGACCTATTGTCATTCTCCCTAAAAAGCATGTGCCTTACCCATTCCCCCAACCCTTCAAAGAAGTCCCCATCATATTTGGAGAATGGTGGAAAGCAGACACAGAAACAGTGATCAACCAAGGTTTACAAACAGGGTCAGGACCAAATGTCTCTGATGCCTACACCATTAATGGTCTTCCAGGACCATTGTATAACTGCTCAGCCAAAGATACATACAAGCTCAAGGTGAAGCCGGGGAAGACCTATCTGCTTCGTTTGATCAACGCTGCACTCAACAATGAGCTGTTCTTCAGCATTGCTAATCACACTTTCACTGTGGTTGAAGCGGATGCAGTGTATGTGAAACCTTTTAATACCAAAGTTGTTCTCATCACACCAGGACAGACCACCAATGTCATTTTGAGGACCAAATCCAAGTCCCCAAATGCCACATTTGTCATGGCAGCTAGGCCTTATGTCTCCGGCCCAGCTGCCTTTGACAACTCTACTACCACAGGTCTACTCGAATATGAAACTTCTGTCTCAAGCAAACACAACAAAAACAAGAACAAGAAGAAGCTGCCTCTTCTCACACCAGTGCTTCCAAAGCTCAATGACACATCGTTTTCAATGAACTACAACAAGAAAATCCGCAGCTTGGCCAATCCCAAATTCCCATCTGCAAATGTCCCGAAAACCGTGGACAAAAACTTCTTCTTCACAGTTGGTCTGGGACTAACTTCATGCTCAAAGAACCAAAACTGCCCAGGCCCAAACAACACCAGGGTCGCCGCGGCAATCAACAATGTGTCATTTGTGCAACCTAATACTGCCCTTCTCCAAGCCCACTTCTTCAACAAATCAAAGGGTGTGTACACCACAGATTTCCCAGCCAACCCATTAATCAAATTCAACTACACAGGTACTCCACCAAGCAACATTGCTTTGAGCAGTGGGACTAAGGTTGTGGTGCTGCCATTCAATACTAGAGTGGAGCTTGTTCTGCAAGACACTAGCATTATTGGGGCTGAGAGCCACCCACTTCACCTCCATGGATTCAATTTCTTTGTGGTGGGTTTCGGATTTGGAAATTTCGATCCTAAAAACGACCCTAAAAAGTACAACCTTGTTGATCCTGCTGAGAGGAACACAGTTGGTGTGCCCTCTGGTGGGTGGGTTGCCCTACGCTTCCTCGCCGATAATCCAGGCGTTTGGTTTATGCACTGCCACCTAGAAGTGCACACCAGCTGGGGATTGAAGATGGCGTGGGTTGTCACTGACGGAAAGCGGCGCAACCAAAAGCTGCCTCCCCCTCCATCAGATCTTCCCAAATGTTAA

Protein Analysis

589

Amino Acids

65.25

Weight (kDa)

9.83

Isoelectric Point (pI)

34.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 46 - 160 1.2e-43 Multicopper oxidase
Cu-oxidase PF00394 172 - 323 5.9e-44 Multicopper oxidase
Cu-oxidase_2 PF07731 441 - 572 9.1e-42 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000610)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60020 AT5G60020 AT5G60020
fragaria_vesca FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 182
AccI GTMKAC 1 cut(s) 952
AccII CGCG 1 cut(s) 1226
AciI CCGC 5 cut(s) 779, 1084, 1224, 1226, 1720
AclWI GGATC 2 cut(s) 1523, 1559
AcoI YGGCCR 2 cut(s) 394, 1092
AcsI RAATTY 3 cut(s) 1103, 1340, 1522
AcuI CTGAAG 1 cut(s) 727
AdeI CACNNNGTG 1 cut(s) 411
AfaI GTAC 4 cut(s) 78, 1307, 1357, 1553
AfiI CCNNNNNNNGG 4 cut(s) 192, 1090, 1601, 1602
AgsI TTSAA 9 cut(s) 266, 511, 776, 1062, 1288, 1345, 1414, 1492, 1690
AhdI GACNNNNNGTC 2 cut(s) 461, 599
AjnI CCWGG 6 cut(s) 116, 631, 829, 1198, 1214, 1636
AjuI GAANNNNNNNTTGG 2 cut(s) 1088, 1120
AleI CACNNNNGTG 1 cut(s) 1028
Alw21I GWGCWC 1 cut(s) 1674
Alw26I GTCTC 5 cut(s) 147, 151, 607, 916, 979
Alw44I GTGCAC 1 cut(s) 1670
AlwI GGATC 2 cut(s) 1523, 1559
AoxI GGCC 6 cut(s) 206, 394, 902, 916, 1092, 1201
ApaLI GTGCAC 1 cut(s) 1670
ApeKI GCWGC 7 cut(s) 719, 896, 923, 1012, 1086, 1405, 1735
ApoI RAATTY 3 cut(s) 1103, 1340, 1522
AseI ATTAAT 2 cut(s) 621, 1334
AspLEI GCGC 1 cut(s) 1725
AspS9I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1202
AsuC2I CCSGG 2 cut(s) 204, 687
AsuHPI GGTGA 5 cut(s) 15, 242, 376, 691, 1469
AsuNHI GCTAGC 1 cut(s) 88
AvaII GGWCC 5 cut(s) 326, 455, 593, 635, 858
BaeGI GKGCMC 3 cut(s) 350, 1596, 1674
BalI TGGCCA 2 cut(s) 396, 1094
BbsI GAAGAC 3 cut(s) 5, 620, 698
Bbv12I GWGCWC 1 cut(s) 1674
BbvI GCAGC 7 cut(s) 706, 908, 910, 999, 1098, 1392, 1722
BccI CCATC 7 cut(s) 309, 317, 395, 530, 1117, 1687, 1756
BciT130I CCWGG 6 cut(s) 118, 633, 831, 1200, 1216, 1638
BclI TGATCA 3 cut(s) 243, 564, 711
BcnI CCSGG 2 cut(s) 204, 687
BcoDI GTCTC 5 cut(s) 147, 151, 607, 916, 979
BfaI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1419, 1446, 1664
BglI GCCNNNNNGGC 1 cut(s) 402
BglII AGATCT 1 cut(s) 1753
BlpI GCTNAGC 1 cut(s) 652
Bme1390I CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1200, 1216, 1638
Bme18I GGWCC 5 cut(s) 326, 455, 593, 635, 858
BmeRI GACNNNNNGTC 2 cut(s) 461, 599
BmgT120I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1202
BmiI GGNNCC 1 cut(s) 207
BmrFI CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1200, 1216, 1638
BmsI GCATC 3 cut(s) 29, 598, 772
BmtI GCTAGC 1 cut(s) 92
BpiI GAAGAC 3 cut(s) 5, 620, 698
Bpu10I CCTNAGC 1 cut(s) 437
Bpu1102I GCTNAGC 1 cut(s) 652
BpuEI CTTGAG 2 cut(s) 659, 961
BpuMI CCSGG 2 cut(s) 204, 687
BsaJI CCNNGG 8 cut(s) 203, 571, 686, 1131, 1198, 1215, 1224, 1483
BsaWI WCCGGW 1 cut(s) 82
BsaXI ACNNNNNCTCC 4 cut(s) 1342, 1372, 1464, 1494
Bsc4I CCNNNNNNNGG 4 cut(s) 192, 1090, 1601, 1602
Bse1I ACTGG 2 cut(s) 290, 1028
Bse3DI GCAATG 2 cut(s) 747, 1371
BseBI CCWGG 6 cut(s) 118, 633, 831, 1200, 1216, 1638
BseDI CCNNGG 8 cut(s) 203, 571, 686, 1131, 1198, 1215, 1224, 1483
BseGI GGATG 2 cut(s) 320, 787
BseLI CCNNNNNNNGG 4 cut(s) 192, 1090, 1601, 1602
BseMI GCAATG 2 cut(s) 747, 1371
BseMII CTCAG 4 cut(s) 356, 666, 1452, 1563
BseNI ACTGG 2 cut(s) 290, 1028
BseSI GKGCMC 3 cut(s) 350, 1596, 1674
BseXI GCAGC 7 cut(s) 706, 908, 910, 999, 1098, 1392, 1722
BseYI CCCAGC 3 cut(s) 919, 1321, 1680
BsgI GTGCAG 1 cut(s) 705
Bsh1236I CGCG 1 cut(s) 1226
BshFI GGCC 6 cut(s) 208, 396, 904, 918, 1094, 1203
BsiHKAI GWGCWC 1 cut(s) 1674
BsiSI CCGG 4 cut(s) 83, 203, 686, 915
BslFI GGGAC 5 cut(s) 503, 856, 1106, 1179, 1402
BslI CCNNNNNNNGG 4 cut(s) 192, 1090, 1601, 1602
BsmAI GTCTC 5 cut(s) 147, 151, 607, 916, 979
BsmFI GGGAC 5 cut(s) 503, 856, 1106, 1179, 1402
BsnI GGCC 6 cut(s) 208, 396, 904, 918, 1094, 1203
Bsp1286I GDGCHC 3 cut(s) 350, 1596, 1674
Bsp1407I TGTACA 1 cut(s) 1305
Bsp143I GATC 7 cut(s) 45, 243, 564, 711, 1528, 1564, 1753
Bsp1720I GCTNAGC 1 cut(s) 652
Bsp19I CCATGG 1 cut(s) 1483
BspACI CCGC 5 cut(s) 779, 1084, 1224, 1226, 1720
BspANI GGCC 6 cut(s) 208, 396, 904, 918, 1094, 1203
BspCNI CTCAG 4 cut(s) 355, 665, 1453, 1564
BspFNI CGCG 1 cut(s) 1226
BspLI GGNNCC 1 cut(s) 207
BspOI GCTAGC 1 cut(s) 92
BspPI GGATC 2 cut(s) 1523, 1559
BspQI GCTCTTC 1 cut(s) 167
BsrDI GCAATG 2 cut(s) 747, 1371
BsrGI TGTACA 1 cut(s) 1305
BsrI ACTGG 2 cut(s) 290, 1028
BssECI CCNNGG 8 cut(s) 203, 571, 686, 1131, 1198, 1215, 1224, 1483
BssMI GATC 7 cut(s) 45, 243, 564, 711, 1528, 1564, 1753
BssT1I CCWWGG 2 cut(s) 571, 1483
Bst2UI CCWGG 6 cut(s) 118, 633, 831, 1200, 1216, 1638
Bst4CI ACNGT 6 cut(s) 187, 562, 769, 1132, 1156, 1585
Bst6I CTCTTC 2 cut(s) 167, 1023
BstAPI GCANNNNNTGC 1 cut(s) 104
BstAUI TGTACA 1 cut(s) 1305
BstC8I GCNNGC 3 cut(s) 90, 105, 420
BstDEI CTNAG 6 cut(s) 342, 437, 652, 1392, 1461, 1572
BstDSI CCRYGG 3 cut(s) 1131, 1224, 1483
BstEII GGTNACC 1 cut(s) 112
BstF5I GGATG 2 cut(s) 320, 787
BstFNI CGCG 1 cut(s) 1226
BstHHI GCGC 1 cut(s) 1725
BstKTI GATC 7 cut(s) 48, 246, 567, 714, 1531, 1567, 1756
BstMAI GTCTC 5 cut(s) 147, 151, 607, 916, 979
BstMBI GATC 7 cut(s) 45, 243, 564, 711, 1528, 1564, 1753
BstMWI GCNNNNNNNGC 5 cut(s) 26, 104, 402, 1039, 1435
BstNI CCWGG 6 cut(s) 118, 633, 831, 1200, 1216, 1638
BstNSI RCATGY 3 cut(s) 107, 422, 485
BstPI GGTNACC 1 cut(s) 112
BstSCI CCNGG 8 cut(s) 116, 202, 631, 685, 829, 1198, 1214, 1636
BstSLI GKGCMC 3 cut(s) 350, 1596, 1674
BstUI CGCG 1 cut(s) 1226
BstV1I GCAGC 7 cut(s) 706, 908, 910, 999, 1098, 1392, 1722
BstV2I GAAGAC 3 cut(s) 5, 620, 698
BstX2I RGATCY 1 cut(s) 1753
BstXI CCANNNNNNTGG 2 cut(s) 290, 1644
BstYI RGATCY 1 cut(s) 1753
BsuRI GGCC 6 cut(s) 208, 396, 904, 918, 1094, 1203
BtgI CCRYGG 3 cut(s) 1131, 1224, 1483
BtsCI GGATG 2 cut(s) 320, 787
BtsI GCAGTG 4 cut(s) 99, 792, 1390, 1654
Cac8I GCNNGC 3 cut(s) 90, 105, 420
CfoI GCGC 1 cut(s) 1725
Cfr13I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1202
Cfr42I CCGCGG 1 cut(s) 1227
Csp6I GTAC 4 cut(s) 77, 1306, 1356, 1552
CviAII CATG 8 cut(s) 104, 260, 290, 419, 482, 892, 1176, 1484
CviQI GTAC 4 cut(s) 77, 1306, 1356, 1552
DdeI CTNAG 6 cut(s) 342, 437, 652, 1392, 1461, 1572
DpnI GATC 7 cut(s) 47, 245, 566, 713, 1530, 1566, 1755
DpnII GATC 7 cut(s) 45, 243, 564, 711, 1528, 1564, 1753
DraIII CACNNNGTG 1 cut(s) 411
DriI GACNNNNNGTC 2 cut(s) 461, 599
EaeI YGGCCR 2 cut(s) 394, 1092
Eam1104I CTCTTC 2 cut(s) 167, 1023
Eam1105I GACNNNNNGTC 2 cut(s) 461, 599
EarI CTCTTC 2 cut(s) 167, 1023
Eco130I CCWWGG 2 cut(s) 571, 1483
Eco147I AGGCCT 1 cut(s) 904
Eco47I GGWCC 5 cut(s) 326, 455, 593, 635, 858
Eco57I CTGAAG 1 cut(s) 727
Eco91I GGTNACC 1 cut(s) 112
EcoO109I RGGNCCY 1 cut(s) 206
EcoO65I GGTNACC 1 cut(s) 112
EcoRII CCWGG 6 cut(s) 116, 631, 829, 1198, 1214, 1636
EcoT14I CCWWGG 2 cut(s) 571, 1483
ErhI CCWWGG 2 cut(s) 571, 1483
FaeI CATG 8 cut(s) 107, 263, 293, 422, 485, 895, 1179, 1487
FaqI GGGAC 5 cut(s) 503, 856, 1106, 1179, 1402
FatI CATG 8 cut(s) 103, 259, 289, 418, 481, 891, 1175, 1483
FbaI TGATCA 3 cut(s) 243, 564, 711
FblI GTMKAC 1 cut(s) 952
FokI GGATG 2 cut(s) 327, 794
FspBI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1419, 1446, 1664
GlaI GCGC 1 cut(s) 1724
GsaI CCCAGC 3 cut(s) 923, 1325, 1684
HaeIII GGCC 6 cut(s) 208, 396, 904, 918, 1094, 1203
HapII CCGG 4 cut(s) 83, 203, 686, 915
HhaI GCGC 1 cut(s) 1725
Hin1II CATG 8 cut(s) 107, 263, 293, 422, 485, 895, 1179, 1487
Hin6I GCGC 1 cut(s) 1723
HinP1I GCGC 1 cut(s) 1723
HinfI GANTC 2 cut(s) 213, 1488
HpaII CCGG 4 cut(s) 83, 203, 686, 915
HphI GGTGA 5 cut(s) 15, 242, 376, 691, 1469
Hpy166II GTNNAC 7 cut(s) 77, 578, 953, 1135, 1306, 1308, 1672
Hpy188I TCNGA 4 cut(s) 357, 607, 1514, 1753
Hpy188III TCNNGA 2 cut(s) 591, 1123
Hpy8I GTNNAC 7 cut(s) 77, 578, 953, 1135, 1306, 1308, 1672
HpyAV CCTTC 4 cut(s) 221, 339, 517, 1277
HpyCH4III ACNGT 6 cut(s) 187, 562, 769, 1132, 1156, 1585
HpyCH4IV ACGT 1 cut(s) 65
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 104, 402, 1039, 1435
HpyF3I CTNAG 6 cut(s) 342, 437, 652, 1392, 1461, 1572
HpySE526I ACGT 1 cut(s) 65
Hsp92II CATG 8 cut(s) 107, 263, 293, 422, 485, 895, 1179, 1487
HspAI GCGC 1 cut(s) 1723
Ksp22I TGATCA 3 cut(s) 243, 564, 711
KspI CCGCGG 1 cut(s) 1227
Kzo9I GATC 7 cut(s) 45, 243, 564, 711, 1528, 1564, 1753
LguI GCTCTTC 1 cut(s) 167
LmnI GCTCC 2 cut(s) 85, 1426
Lsp1109I GCAGC 7 cut(s) 706, 908, 910, 999, 1098, 1392, 1722
LweI GCATC 3 cut(s) 29, 598, 772
MaeI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1419, 1446, 1664
MaeII ACGT 1 cut(s) 65
MaeIII GTNAC 5 cut(s) 112, 151, 230, 274, 1705
MalI GATC 7 cut(s) 47, 245, 566, 713, 1530, 1566, 1755
MboI GATC 7 cut(s) 45, 243, 564, 711, 1528, 1564, 1753
MflI RGATCY 1 cut(s) 1753
MhlI GDGCHC 3 cut(s) 350, 1596, 1674
MlsI TGGCCA 2 cut(s) 396, 1094
MluCI AATT 7 cut(s) 294, 302, 351, 1103, 1340, 1492, 1522
MluNI TGGCCA 2 cut(s) 396, 1094
MnlI CCTC 9 cut(s) 395, 849, 1026, 1490, 1569, 1606, 1634, 1749, 1755
Mox20I TGGCCA 2 cut(s) 396, 1094
MscI TGGCCA 2 cut(s) 396, 1094
MseI TTAA 6 cut(s) 132, 305, 621, 804, 1334, 1768
MslI CAYNNNNRTG 4 cut(s) 288, 412, 1028, 1482
Msp20I TGGCCA 2 cut(s) 396, 1094
MspA1I CMGCKG 3 cut(s) 923, 1226, 1680
MspI CCGG 4 cut(s) 83, 203, 686, 915
MspR9I CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1200, 1216, 1638
MvaI CCWGG 6 cut(s) 118, 633, 831, 1200, 1216, 1638
MvnI CGCG 1 cut(s) 1226
MwoI GCNNNNNNNGC 5 cut(s) 26, 104, 402, 1039, 1435
NciI CCSGG 2 cut(s) 204, 687
NcoI CCATGG 1 cut(s) 1483
NdeII GATC 7 cut(s) 45, 243, 564, 711, 1528, 1564, 1753
NheI GCTAGC 1 cut(s) 88
NlaIII CATG 8 cut(s) 107, 263, 293, 422, 485, 895, 1179, 1487
NlaIV GGNNCC 1 cut(s) 207
NmuCI GTSAC 4 cut(s) 151, 230, 274, 1705
NspI RCATGY 3 cut(s) 107, 422, 485
OliI CACNNNNGTG 1 cut(s) 1028
PaeI GCATGC 2 cut(s) 107, 422
PceI AGGCCT 1 cut(s) 904
PciSI GCTCTTC 1 cut(s) 167
PfeI GAWTC 2 cut(s) 213, 1488
PfoI TCCNGGA 1 cut(s) 631
PshBI ATTAAT 2 cut(s) 621, 1334
PsiI TTATAA 1 cut(s) 182
Psp6I CCWGG 6 cut(s) 116, 631, 829, 1198, 1214, 1636
PspEI GGTNACC 1 cut(s) 112
PspFI CCCAGC 3 cut(s) 919, 1321, 1680
PspGI CCWGG 6 cut(s) 116, 631, 829, 1198, 1214, 1636
PspN4I GGNNCC 1 cut(s) 207
PspPI GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1202
PsuI RGATCY 1 cut(s) 1753
PvuII CAGCTG 2 cut(s) 923, 1680
RsaI GTAC 4 cut(s) 78, 1307, 1357, 1553
RsaNI GTAC 4 cut(s) 77, 1306, 1356, 1552
RseI CAYNNNNRTG 4 cut(s) 288, 412, 1028, 1482
SacII CCGCGG 1 cut(s) 1227
SapI GCTCTTC 1 cut(s) 167
SaqAI TTAA 6 cut(s) 132, 305, 621, 804, 1334, 1768
Sau3AI GATC 7 cut(s) 45, 243, 564, 711, 1528, 1564, 1753
Sau96I GGNCC 8 cut(s) 206, 326, 455, 593, 635, 858, 917, 1202
ScrFI CCNGG 8 cut(s) 118, 204, 633, 687, 831, 1200, 1216, 1638
SduI GDGCHC 3 cut(s) 350, 1596, 1674
SfaNI GCATC 3 cut(s) 29, 598, 772
Sfr303I CCGCGG 1 cut(s) 1227
SgrBI CCGCGG 1 cut(s) 1227
SinI GGWCC 5 cut(s) 326, 455, 593, 635, 858
SmiMI CAYNNNNRTG 4 cut(s) 288, 412, 1028, 1482
SmlI CTYRAG 2 cut(s) 674, 976
SmoI CTYRAG 2 cut(s) 674, 976
SphI GCATGC 2 cut(s) 107, 422
Sse9I AATT 7 cut(s) 294, 302, 351, 1103, 1340, 1492, 1522
SseBI AGGCCT 1 cut(s) 904
SsiI CCGC 5 cut(s) 779, 1084, 1224, 1226, 1720
SspMI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1419, 1446, 1664
StuI AGGCCT 1 cut(s) 904
StyD4I CCNGG 8 cut(s) 116, 202, 631, 685, 829, 1198, 1214, 1636
StyI CCWWGG 2 cut(s) 571, 1483
TaaI ACNGT 6 cut(s) 187, 562, 769, 1132, 1156, 1585
TaiI ACGT 1 cut(s) 68
TaqI TCGA 2 cut(s) 957, 1527
TasI AATT 7 cut(s) 294, 302, 351, 1103, 1340, 1492, 1522
TatI WGTACW 3 cut(s) 76, 1305, 1551
TauI GCSGC 3 cut(s) 1226, 1229, 1723
TfiI GAWTC 2 cut(s) 213, 1488
Tru1I TTAA 6 cut(s) 132, 305, 621, 804, 1334, 1768
Tru9I TTAA 6 cut(s) 132, 305, 621, 804, 1334, 1768
TseFI GTSAC 4 cut(s) 151, 230, 274, 1705
TseI GCWGC 7 cut(s) 719, 896, 923, 1012, 1086, 1405, 1735
Tsp45I GTSAC 4 cut(s) 151, 230, 274, 1705
TspDTI ATGAA 4 cut(s) 321, 978, 1079, 1164
TspGWI ACGGA 1 cut(s) 1728
VneI GTGCAC 1 cut(s) 1670
VpaK11BI GGWCC 5 cut(s) 326, 455, 593, 635, 858
VspI ATTAAT 2 cut(s) 621, 1334
XapI RAATTY 3 cut(s) 1103, 1340, 1522
XceI RCATGY 3 cut(s) 107, 422, 485
XcmI CCANNNNNNNNNTGG 1 cut(s) 889
XmiI GTMKAC 1 cut(s) 952
XspI CTAG 8 cut(s) 9, 89, 210, 239, 900, 1419, 1446, 1664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.