Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000610

Physical Location & Seq

Genomic Coordinates Reverse (-)

67511438 .. 67515907

Gene Structure 4470 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G038270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGGCGTTGCTCTTCTTTCAGTTGTTAAGCTCTTTGTTTTCTCTTTCGTCACATTGGTTCTCATTCCTCAGCAGACTCTTGCAAGCATAACGAGACATTACAAGTTTGATATCCAAATGAAAAATGTGACAAGATTGTGTCACACGAAGAGCATTGTAACTGTAAACGGTCAATTTCCTGGGCCTCGAGTTGTTGCTAGGGAGGGTGATCGCCTCCTCATTAGAGTGGTTAACCATGTTCAAAGCAACATCTCCATCCACTGGCATGGGATTCGACAACTTCAAACTGGATGGGCAGATGGTCCAGCATACATTACCCAATGTCCAATACAATCTGGCAACGGTTACGTGTACAACTTCACCATTATAGGCCAAAGAGGCACTCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACCATCTATGGTCCCCTAATCATTCTTCCCAAGCGTGGTGTTCCTTATCCATTTACCAAACCCTACAAGGAAGTTCCCATCATCTTTGGAGAATGGTGGAATGCAGATCCTGAAGCAGTCATAAACCAAGCCCTGCAAACCGGTGGAGGACCAAATGTTTCTGATGCTTACACCATCAACGGACTCCCAGGGCCATTGTACAACTGCTCTTCCAAAGATACTTTCAAGCTAAAGGTTCAAGCTGGGAAGACATACCTTCTGCGCCTAATCAATGCAGCGCTGAACGACGAGCTCTTCTTCAGCATTGCAAACCACACCCTCAAAGTGGTGGAAACTGATGCAGTTTACGTCAAACCCTTCGAGACCAACACCATTCTCATTGCCCCGGGACAAACCACAAATGTTCTTCTCAAAACAAAACCTAACTACCCAAACGCCACATTTTTCATGACTGCAAGGCCATACGTGACTGGTCTAGGCACCTTTGATAACTCCACTCTTGCTGGCATTTTAGAATACGAAACGACTACACTTCATTCAACCCTCCCAATGAACAAACTTCCACTCCACAAACCAGTTCTTCCAGTTCTAAATGACACATCGTTTGCAACAAAATTCGCCAACAAACTCCGTAGCTTGAACACTCCCCAGTTCCCTGCTAATGTTCCACAGAAAGTTGACAAGCATTTGTTCTTCACCGTAGGGCTTGGAACCAACCCATGTCGCCAGCAGCAACACAATAACCAGACCTGCCAGGGACCGAATGGAACCATGTTTGCTGCTTCAATTAACAACATTTCTTTCACTATGCCAAACACTGCCCTACTCCAATCCCACTTCTTTGGCCAATCCAATGGGGTTTATTCCCCTAATTTTCCAATCAGTCCTTTAATTCCATTTAATTACACTGGAGCCCAGCTGAACAATACTAATGTGGGCAATGGTACTAAGCTAATGGTGCTTCCCTTTAACACTAGTGTGGAGTTGGTGTTGCAGGACACTAGTATTCTTGGTGCTGAAAGTCATCCTCTTCATCTTCACGGCTTTAATTTCTTTTTTGTTGGTCAAGGTTTTGGCAACTTCGACCAAAATAAGGACCCTAGGAAGTTCAATCTCATCGACCCCGTTGAGAGAAACACCGTGGGTGTGCCATCCGGTGGTTGGGTTGCTATTCGGTTTCTAGCAGACAACCCAGGTGTTTGGTTCATGCATTGTCACTTGGAGATCCATACCAGCTGGGGTTTGAAGATGGCTTGGGTGGTCTTAGATGGAAAGTTTCCCAATCAAAAGTTGCTTCCTCCACCATTGGATCTTCCCAAATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

581

Amino Acids

64.65

Weight (kDa)

9.35

Isoelectric Point (pI)

31.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 151	1.8e-41	Multicopper oxidase
Cu-oxidase	PF00394	164 - 314	8.7e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	439 - 563	3.4e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60020 AT5G60020 AT5G60020
fragaria_vesca	FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica	MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica	Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis	pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis	RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata	RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora	Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii	Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa	Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha	Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana	Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1178
AccB1I	GGYRCC	1 cut(s)	899
AccB7I	CCANNNNNTGG	2 cut(s)	261, 1577
AclWI	GGATC	3 cut(s)	521, 1639, 1737
AcoI	YGGCCR	1 cut(s)	1264
AcsI	RAATTY	1 cut(s)	1034
AcuI	CTGAAG	2 cut(s)	552, 703
AfaI	GTAC	3 cut(s)	353, 620, 1366
AfeI	AGCGCT	1 cut(s)	699
AfiI	CCNNNNNNNGG	6 cut(s)	261, 455, 745, 1513, 1577, 1581
AflIII	ACRYGT	1 cut(s)	348
AgeI	ACCGGT	1 cut(s)	560
AgsI	TTSAA	9 cut(s)	242, 284, 646, 659, 960, 1060, 1206, 1531, 1666
AhlI	ACTAGT	2 cut(s)	1394, 1421
AjnI	CCWGG	4 cut(s)	178, 607, 1173, 1612
AjuI	GAANNNNNNNTTGG	2 cut(s)	626, 658
AleI	CACNNNNGTG	1 cut(s)	1397
AluBI	AGCT	8 cut(s)	31, 649, 662, 712, 1056, 1339, 1372, 1656
AluI	AGCT	8 cut(s)	31, 649, 662, 712, 1056, 1339, 1372, 1656
Alw21I	GWGCWC	1 cut(s)	714
Alw26I	GTCTC	2 cut(s)	88, 776
AlwI	GGATC	3 cut(s)	521, 1639, 1737
AlwNI	CAGNNNCTG	1 cut(s)	530
Ama87I	CYCGRG	2 cut(s)	186, 805
Aor51HI	AGCGCT	1 cut(s)	699
AoxI	GGCC	5 cut(s)	182, 370, 611, 878, 1264
ApeKI	GCWGC	3 cut(s)	695, 1150, 1199
ApoI	RAATTY	1 cut(s)	1034
ArsI	GACNNNNNNTTYG	2 cut(s)	1007, 1039
AsiGI	ACCGGT	1 cut(s)	560
AspA2I	CCTAGG	1 cut(s)	1520
AspLEI	GCGC	2 cut(s)	684, 700
AspS9I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
AsuC2I	CCSGG	2 cut(s)	806, 807
AsuHPI	GGTGA	3 cut(s)	218, 352, 1108
AvaI	CYCGRG	2 cut(s)	186, 805
AvaII	GGWCC	5 cut(s)	302, 431, 569, 1178, 1516
AvrII	CCTAGG	1 cut(s)	1520
BalI	TGGCCA	1 cut(s)	1266
BanI	GGYRCC	1 cut(s)	899
BanII	GRGCYC	2 cut(s)	714, 1336
BbsI	GAAGAC	1 cut(s)	674
Bbv12I	GWGCWC	1 cut(s)	714
BbvCI	CCTCAGC	1 cut(s)	69
BbvI	GCAGC	3 cut(s)	707, 1162, 1186
BccI	CCATC	9 cut(s)	263, 285, 293, 431, 506, 602, 1579, 1663, 1682
BceAI	ACGGC	1 cut(s)	1477
BcgI	CGANNNNNNTGC	2 cut(s)	254, 288
BciT130I	CCWGG	4 cut(s)	180, 609, 1175, 1614
BcnI	CCSGG	2 cut(s)	806, 807
BcoDI	GTCTC	2 cut(s)	88, 776
BcuI	ACTAGT	2 cut(s)	1394, 1421
BfaI	CTAG	6 cut(s)	198, 896, 1395, 1422, 1521, 1601
BfoI	RGCGCY	1 cut(s)	701
BfuAI	ACCTGC	1 cut(s)	1178
BglI	GCCNNNNNGGC	1 cut(s)	378
BisI	GCNGC	3 cut(s)	696, 1151, 1200
BlnI	CCTAGG	1 cut(s)	1520
BlsI	GCNGC	3 cut(s)	697, 1152, 1201
Bme1390I	CCNGG	6 cut(s)	180, 609, 806, 807, 1175, 1614
Bme18I	GGWCC	5 cut(s)	302, 431, 569, 1178, 1516
BmeT110I	CYCGRG	2 cut(s)	186, 805
BmgT120I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
BmiI	GGNNCC	7 cut(s)	433, 901, 1132, 1179, 1189, 1333, 1518
BmrFI	CCNGG	6 cut(s)	180, 609, 806, 807, 1175, 1614
BmrI	ACTGGG	1 cut(s)	1063
BmsI	GCATC	2 cut(s)	574, 748
BmuI	ACTGGG	1 cut(s)	1063
BpiI	GAAGAC	1 cut(s)	674
BpmI	CTGGAG	1 cut(s)	1350
Bpu10I	CCTNAGC	1 cut(s)	69
BpuMI	CCSGG	2 cut(s)	806, 807
BsaAI	YACGTR	2 cut(s)	349, 886
BsaI	GGTCTC	1 cut(s)	776
BsaJI	CCNNGG	9 cut(s)	179, 607, 608, 804, 805, 1174, 1520, 1560, 1612
BsaWI	WCCGGW	2 cut(s)	560, 1574
BsaXI	ACNNNNNCTCC	4 cut(s)	969, 999, 1394, 1424
Bsc4I	CCNNNNNNNGG	6 cut(s)	261, 455, 745, 1513, 1577, 1581
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	7 cut(s)	266, 292, 895, 995, 1004, 1069, 1333
Bse3DI	GCAATG	3 cut(s)	723, 798, 1366
BseBI	CCWGG	4 cut(s)	180, 609, 1175, 1614
BseDI	CCNNGG	9 cut(s)	179, 607, 608, 804, 805, 1174, 1520, 1560, 1612
BseGI	GGATG	4 cut(s)	255, 296, 1444, 1571
BseLI	CCNNNNNNNGG	6 cut(s)	261, 455, 745, 1513, 1577, 1581
BseMI	GCAATG	3 cut(s)	723, 798, 1366
BseMII	CTCAG	1 cut(s)	83
BseNI	ACTGG	7 cut(s)	266, 292, 895, 995, 1004, 1069, 1333
BseRI	GAGGAG	1 cut(s)	206
BseXI	GCAGC	3 cut(s)	707, 1162, 1186
BseYI	CCCAGC	3 cut(s)	662, 1335, 1656
BshFI	GGCC	5 cut(s)	184, 372, 613, 880, 1266
BshNI	GGYRCC	1 cut(s)	899
BshTI	ACCGGT	1 cut(s)	560
BsiHKAI	GWGCWC	1 cut(s)	714
BsiHKCI	CYCGRG	2 cut(s)	186, 805
BsiSI	CCGG	3 cut(s)	561, 806, 1575
BslFI	GGGAC	3 cut(s)	417, 822, 1191
BslI	CCNNNNNNNGG	6 cut(s)	261, 455, 745, 1513, 1577, 1581
BsmAI	GTCTC	2 cut(s)	88, 776
BsmFI	GGGAC	3 cut(s)	417, 822, 1191
BsmI	GAATGC	1 cut(s)	526
BsnI	GGCC	5 cut(s)	184, 372, 613, 880, 1266
Bso31I	GGTCTC	1 cut(s)	776
BsoBI	CYCGRG	2 cut(s)	186, 805
Bsp1286I	GDGCHC	2 cut(s)	714, 1336
Bsp1407I	TGTACA	2 cut(s)	351, 618
Bsp143I	GATC	5 cut(s)	208, 416, 526, 1644, 1729
BspANI	GGCC	5 cut(s)	184, 372, 613, 880, 1266
BspCNI	CTCAG	1 cut(s)	82
BspHI	TCATGA	1 cut(s)	867
BspLI	GGNNCC	7 cut(s)	433, 901, 1132, 1179, 1189, 1333, 1518
BspMI	ACCTGC	1 cut(s)	1178
BspPI	GGATC	3 cut(s)	521, 1639, 1737
BspQI	GCTCTTC	4 cut(s)	18, 143, 634, 719
BspT107I	GGYRCC	1 cut(s)	899
BspTNI	GGTCTC	1 cut(s)	776
BsrDI	GCAATG	3 cut(s)	723, 798, 1366
BsrFI	RCCGGY	1 cut(s)	560
BsrGI	TGTACA	2 cut(s)	351, 618
BsrI	ACTGG	7 cut(s)	266, 292, 895, 995, 1004, 1069, 1333
BssAI	RCCGGY	1 cut(s)	560
BssECI	CCNNGG	9 cut(s)	179, 607, 608, 804, 805, 1174, 1520, 1560, 1612
BssMI	GATC	5 cut(s)	208, 416, 526, 1644, 1729
BssT1I	CCWWGG	1 cut(s)	1520
Bst2UI	CCWGG	4 cut(s)	180, 609, 1175, 1614
Bst4CI	ACNGT	5 cut(s)	163, 170, 344, 1120, 1561
Bst6I	CTCTTC	5 cut(s)	18, 143, 634, 719, 1455
BstAUI	TGTACA	2 cut(s)	351, 618
BstBAI	YACGTR	2 cut(s)	349, 886
BstC8I	GCNNGC	4 cut(s)	85, 396, 925, 1148
BstDEI	CTNAG	4 cut(s)	69, 413, 1368, 1684
BstDSI	CCRYGG	1 cut(s)	1560
BstF5I	GGATG	4 cut(s)	255, 296, 1444, 1571
BstH2I	RGCGCY	1 cut(s)	701
BstHHI	GCGC	2 cut(s)	684, 700
BstKTI	GATC	5 cut(s)	211, 419, 529, 1647, 1732
BstMAI	GTCTC	2 cut(s)	88, 776
BstMBI	GATC	5 cut(s)	208, 416, 526, 1644, 1729
BstMWI	GCNNNNNNNGC	2 cut(s)	378, 1378
BstNI	CCWGG	4 cut(s)	180, 609, 1175, 1614
BstNSI	RCATGY	1 cut(s)	398
BstSCI	CCNGG	6 cut(s)	178, 607, 804, 805, 1173, 1612
BstV1I	GCAGC	3 cut(s)	707, 1162, 1186
BstV2I	GAAGAC	1 cut(s)	674
BstX2I	RGATCY	3 cut(s)	526, 1644, 1729
BstXI	CCANNNNNNTGG	4 cut(s)	266, 1262, 1274, 1620
BstYI	RGATCY	3 cut(s)	526, 1644, 1729
BsuRI	GGCC	5 cut(s)	184, 372, 613, 880, 1266
BtgI	CCRYGG	1 cut(s)	1560
BtsCI	GGATG	4 cut(s)	255, 296, 1444, 1571
BtsI	GCAGTG	1 cut(s)	1236
BtsIMutI	CAGTG	3 cut(s)	259, 1236, 1326
BveI	ACCTGC	1 cut(s)	1178
Cac8I	GCNNGC	4 cut(s)	85, 396, 925, 1148
CaiI	CAGNNNCTG	1 cut(s)	530
CciI	TCATGA	1 cut(s)	867
CfoI	GCGC	2 cut(s)	684, 700
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
Cfr9I	CCCGGG	1 cut(s)	805
Csp6I	GTAC	3 cut(s)	352, 619, 1365
CspAI	ACCGGT	1 cut(s)	560
CviAII	CATG	8 cut(s)	236, 266, 395, 408, 868, 1140, 1192, 1627
CviQI	GTAC	3 cut(s)	352, 619, 1365
DdeI	CTNAG	4 cut(s)	69, 413, 1368, 1684
DpnI	GATC	5 cut(s)	210, 418, 528, 1646, 1731
DpnII	GATC	5 cut(s)	208, 416, 526, 1644, 1729
EaeI	YGGCCR	1 cut(s)	1264
Eam1104I	CTCTTC	5 cut(s)	18, 143, 634, 719, 1455
EarI	CTCTTC	5 cut(s)	18, 143, 634, 719, 1455
Ecl136II	GAGCTC	1 cut(s)	712
Eco130I	CCWWGG	1 cut(s)	1520
Eco24I	GRGCYC	2 cut(s)	714, 1336
Eco31I	GGTCTC	1 cut(s)	776
Eco32I	GATATC	1 cut(s)	112
Eco47I	GGWCC	5 cut(s)	302, 431, 569, 1178, 1516
Eco47III	AGCGCT	1 cut(s)	699
Eco53kI	GAGCTC	1 cut(s)	712
Eco57I	CTGAAG	2 cut(s)	552, 703
Eco88I	CYCGRG	2 cut(s)	186, 805
EcoICRI	GAGCTC	1 cut(s)	712
EcoO109I	RGGNCCY	1 cut(s)	1516
EcoRII	CCWGG	4 cut(s)	178, 607, 1173, 1612
EcoRV	GATATC	1 cut(s)	112
EcoT14I	CCWWGG	1 cut(s)	1520
EcoT22I	ATGCAT	1 cut(s)	1632
EcoT38I	GRGCYC	2 cut(s)	714, 1336
ErhI	CCWWGG	1 cut(s)	1520
FaeI	CATG	8 cut(s)	239, 269, 398, 411, 871, 1143, 1195, 1630
FaqI	GGGAC	3 cut(s)	417, 822, 1191
FatI	CATG	8 cut(s)	235, 265, 394, 407, 867, 1139, 1191, 1626
Fnu4HI	GCNGC	3 cut(s)	696, 1151, 1200
FokI	GGATG	4 cut(s)	242, 303, 1431, 1558
FriOI	GRGCYC	2 cut(s)	714, 1336
Fsp4HI	GCNGC	3 cut(s)	696, 1151, 1200
FspBI	CTAG	6 cut(s)	198, 896, 1395, 1422, 1521, 1601
GlaI	GCGC	2 cut(s)	683, 699
GluI	GCNGC	3 cut(s)	696, 1151, 1200
GsaI	CCCAGC	3 cut(s)	666, 1339, 1660
GsuI	CTGGAG	1 cut(s)	1350
HaeII	RGCGCY	1 cut(s)	701
HaeIII	GGCC	5 cut(s)	184, 372, 613, 880, 1266
HapII	CCGG	3 cut(s)	561, 806, 1575
HhaI	GCGC	2 cut(s)	684, 700
Hin1II	CATG	8 cut(s)	239, 269, 398, 411, 871, 1143, 1195, 1630
Hin6I	GCGC	2 cut(s)	682, 698
HinP1I	GCGC	2 cut(s)	682, 698
HincII	GTYRAC	2 cut(s)	232, 1099
HindII	GTYRAC	2 cut(s)	232, 1099
HinfI	GANTC	3 cut(s)	76, 271, 603
HpaI	GTTAAC	1 cut(s)	232
HpaII	CCGG	3 cut(s)	561, 806, 1575
HphI	GGTGA	3 cut(s)	218, 352, 1108
Hpy166II	GTNNAC	5 cut(s)	166, 232, 352, 766, 1099
Hpy188I	TCNGA	1 cut(s)	583
Hpy188III	TCNNGA	3 cut(s)	530, 781, 868
Hpy8I	GTNNAC	5 cut(s)	166, 232, 352, 766, 1099
Hpy99I	CGWCG	1 cut(s)	710
HpyAV	CCTTC	2 cut(s)	686, 787
HpyCH4III	ACNGT	5 cut(s)	163, 170, 344, 1120, 1561
HpyCH4IV	ACGT	3 cut(s)	348, 768, 885
HpyF10VI	GCNNNNNNNGC	2 cut(s)	378, 1378
HpyF3I	CTNAG	4 cut(s)	69, 413, 1368, 1684
HpySE526I	ACGT	3 cut(s)	348, 768, 885
Hsp92II	CATG	8 cut(s)	239, 269, 398, 411, 871, 1143, 1195, 1630
HspAI	GCGC	2 cut(s)	682, 698
KspAI	GTTAAC	1 cut(s)	232
Kzo9I	GATC	5 cut(s)	208, 416, 526, 1644, 1729
LguI	GCTCTTC	4 cut(s)	18, 143, 634, 719
LmnI	GCTCC	1 cut(s)	1331
Lsp1109I	GCAGC	3 cut(s)	707, 1162, 1186
LweI	GCATC	2 cut(s)	574, 748
MaeI	CTAG	6 cut(s)	198, 896, 1395, 1422, 1521, 1601
MaeII	ACGT	3 cut(s)	348, 768, 885
MaeIII	GTNAC	7 cut(s)	49, 127, 140, 157, 344, 886, 1634
MalI	GATC	5 cut(s)	210, 418, 528, 1646, 1731
MboI	GATC	5 cut(s)	208, 416, 526, 1644, 1729
MflI	RGATCY	3 cut(s)	526, 1644, 1729
MhlI	GDGCHC	2 cut(s)	714, 1336
MlsI	TGGCCA	1 cut(s)	1266
MluCI	AATT	7 cut(s)	173, 1034, 1206, 1291, 1311, 1321, 1468
MluNI	TGGCCA	1 cut(s)	1266
MlyI	GAGTC	2 cut(s)	70, 597
Mox20I	TGGCCA	1 cut(s)	1266
Mph1103I	ATGCAT	1 cut(s)	1632
MscI	TGGCCA	1 cut(s)	1266
MseI	TTAA	8 cut(s)	27, 231, 1209, 1310, 1320, 1389, 1467, 1744
MslI	CAYNNNNRTG	3 cut(s)	224, 264, 1397
Msp20I	TGGCCA	1 cut(s)	1266
MspA1I	CMGCKG	2 cut(s)	1339, 1656
MspI	CCGG	3 cut(s)	561, 806, 1575
MspR9I	CCNGG	6 cut(s)	180, 609, 806, 807, 1175, 1614
Mva1269I	GAATGC	1 cut(s)	526
MvaI	CCWGG	4 cut(s)	180, 609, 1175, 1614
MwoI	GCNNNNNNNGC	2 cut(s)	378, 1378
NciI	CCSGG	2 cut(s)	806, 807
NdeII	GATC	5 cut(s)	208, 416, 526, 1644, 1729
NlaIII	CATG	8 cut(s)	239, 269, 398, 411, 871, 1143, 1195, 1630
NlaIV	GGNNCC	7 cut(s)	433, 901, 1132, 1179, 1189, 1333, 1518
NmuCI	GTSAC	5 cut(s)	49, 127, 140, 886, 1634
NsiI	ATGCAT	1 cut(s)	1632
NspI	RCATGY	1 cut(s)	398
OliI	CACNNNNGTG	1 cut(s)	1397
PaeI	GCATGC	1 cut(s)	398
PaeR7I	CTCGAG	1 cut(s)	186
PagI	TCATGA	1 cut(s)	867
PasI	CCCWGGG	1 cut(s)	608
PciSI	GCTCTTC	4 cut(s)	18, 143, 634, 719
PctI	GAATGC	1 cut(s)	526
PfeI	GAWTC	1 cut(s)	271
PflMI	CCANNNNNTGG	2 cut(s)	261, 1577
PinAI	ACCGGT	1 cut(s)	560
PkrI	GCNGC	3 cut(s)	697, 1152, 1201
PleI	GAGTC	2 cut(s)	70, 597
PpsI	GAGTC	2 cut(s)	70, 597
Ppu21I	YACGTR	2 cut(s)	349, 886
PpuMI	RGGWCCY	1 cut(s)	1516
Psp124BI	GAGCTC	1 cut(s)	714
Psp5II	RGGWCCY	1 cut(s)	1516
Psp6I	CCWGG	4 cut(s)	178, 607, 1173, 1612
PspFI	CCCAGC	3 cut(s)	662, 1335, 1656
PspGI	CCWGG	4 cut(s)	178, 607, 1173, 1612
PspN4I	GGNNCC	7 cut(s)	433, 901, 1132, 1179, 1189, 1333, 1518
PspPI	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
PspPPI	RGGWCCY	1 cut(s)	1516
PspXI	VCTCGAGB	1 cut(s)	186
PstNI	CAGNNNCTG	1 cut(s)	530
PsuI	RGATCY	3 cut(s)	526, 1644, 1729
PvuII	CAGCTG	2 cut(s)	1339, 1656
RsaI	GTAC	3 cut(s)	353, 620, 1366
RsaNI	GTAC	3 cut(s)	352, 619, 1365
RseI	CAYNNNNRTG	3 cut(s)	224, 264, 1397
SacI	GAGCTC	1 cut(s)	714
SapI	GCTCTTC	4 cut(s)	18, 143, 634, 719
SaqAI	TTAA	8 cut(s)	27, 231, 1209, 1310, 1320, 1389, 1467, 1744
SatI	GCNGC	3 cut(s)	696, 1151, 1200
Sau3AI	GATC	5 cut(s)	208, 416, 526, 1644, 1729
Sau96I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
SchI	GAGTC	2 cut(s)	70, 597
ScrFI	CCNGG	6 cut(s)	180, 609, 806, 807, 1175, 1614
SduI	GDGCHC	2 cut(s)	714, 1336
SfaNI	GCATC	2 cut(s)	574, 748
Sfr274I	CTCGAG	1 cut(s)	186
SinI	GGWCC	5 cut(s)	302, 431, 569, 1178, 1516
SlaI	CTCGAG	1 cut(s)	186
SmaI	CCCGGG	1 cut(s)	807
SmiMI	CAYNNNNRTG	3 cut(s)	224, 264, 1397
SmlI	CTYRAG	1 cut(s)	186
SmoI	CTYRAG	1 cut(s)	186
SpeI	ACTAGT	2 cut(s)	1394, 1421
SphI	GCATGC	1 cut(s)	398
Sse9I	AATT	7 cut(s)	173, 1034, 1206, 1291, 1311, 1321, 1468
SspMI	CTAG	6 cut(s)	198, 896, 1395, 1422, 1521, 1601
SstI	GAGCTC	1 cut(s)	714
StyD4I	CCNGG	6 cut(s)	178, 607, 804, 805, 1173, 1612
StyI	CCWWGG	1 cut(s)	1520
TaaI	ACNGT	5 cut(s)	163, 170, 344, 1120, 1561
TaiI	ACGT	3 cut(s)	351, 771, 888
TaqI	TCGA	5 cut(s)	187, 274, 780, 1503, 1539
TaqII	GACCGA	1 cut(s)	1195
TasI	AATT	7 cut(s)	173, 1034, 1206, 1291, 1311, 1321, 1468
TatI	WGTACW	2 cut(s)	351, 618
TfiI	GAWTC	1 cut(s)	271
Tru1I	TTAA	8 cut(s)	27, 231, 1209, 1310, 1320, 1389, 1467, 1744
Tru9I	TTAA	8 cut(s)	27, 231, 1209, 1310, 1320, 1389, 1467, 1744
TscAI	CASTG	3 cut(s)	266, 1243, 1333
TseFI	GTSAC	5 cut(s)	49, 127, 140, 886, 1634
TseI	GCWGC	3 cut(s)	695, 1150, 1199
Tsp45I	GTSAC	5 cut(s)	49, 127, 140, 886, 1634
TspDTI	ATGAA	7 cut(s)	134, 396, 856, 944, 986, 1442, 1615
TspGWI	ACGGA	2 cut(s)	615, 1040
TspMI	CCCGGG	1 cut(s)	805
TspRI	CASTG	3 cut(s)	266, 1243, 1333
Van91I	CCANNNNNTGG	2 cut(s)	261, 1577
VpaK11BI	GGWCC	5 cut(s)	302, 431, 569, 1178, 1516
XapI	RAATTY	1 cut(s)	1034
XceI	RCATGY	1 cut(s)	398
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1181, 1578
XhoI	CTCGAG	1 cut(s)	186
XmaI	CCCGGG	1 cut(s)	805
XmaJI	CCTAGG	1 cut(s)	1520
XspI	CTAG	6 cut(s)	198, 896, 1395, 1422, 1521, 1601
Zsp2I	ATGCAT	1 cut(s)	1632

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.