MD11G1119000.v1.1

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000610
Physical Location & Seq
Forward (+)
10868218 .. 10871214
2997 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1119000.v1.1.491

Sequence Viewer

Length: 1746 bp
ATGGGTGTTCACCTTCTTTCACCACCACCATTTCTTAGGCTCTTTCTCTTTTCCTTCATAACGTTGTGTCTTATTCCTCAACATGCTCTTGCTGGCATAACCAGACACTACAAGTTTGAAATCAAACTGCAAAACGTGACAAGATTGTGTCACACAAAGAGCATAATAACAGTGAACGGGCAGTTTCCTGGCCCCAGAATCATTGCTAGAGAGGGTGATCAACTCCTAATTAAAGTGGTTAACCACGTCCAAAACAACATCTCTATCCACTGGCATGGTATTCGACAACTTCGATCGGGGTGGGCCGATGGCCCTGCATATGTGACCCAATGTCCCATACAAACAGGCAACAGTTATGTCTACAACTTCACCATTACAGGGCAAAGAGGCACTCTTTTCTGGCATGCTCACATTTCATGGCTCAGATCAACCATTTATGGTCCCTTAATCATACTTCCCAAGCGCGGTGTGCCTTACCCTTTCACTAAACCCTACAAGGAGGTTCCAATTATTTTTGGTGAGTGGTGGAATGCAGACCCTGAAGTCATAATTAGGCAGGCTTTGCAAACAGGTGGAGGTCCAAATGTCTCTGATGCTTATACCATCAATGGACTCCCAGGACCGCTATACAATTGTTCTACCAAAGATGCATTCAAGCTGAAGGTTCGACCTGGCAAGACCTACCTTCTCCGGCTAATCAACGCAGCACTCAACGACGAGCTTTTCTTCAGTATTGCAAATCACACCCTCAAAGTAGTAGAAGCCGACGCTGTTTATGTCAAACCCTTCGAGACTCGCACAATTCTCATTGCCCCCGGCCAAACCACAAATGTTCTTCTCAAGACCAAACCCAACTTCCCAAACGCCACATTTTTCATGACTGCTAGGCCATATGTGACTGGCCAAGGCACATTTGACAACTCCACAGTTGCTGGCATTCTAGAGTACGAATCGCCCTCCAAAACCAAAACCCTAACAACGAAGAGACATCCGCTCTTCAAACCAAACCTCCCCGCACTAAACGACACATCATTCGCAACCAAATTCGCCAACAAACTCCGCAGCTTGAACACCCAACAATTCCCAGCTAATGTCCCCCAAAAAGTTGATAAGCACTTTTTCTTCACCATAGGCCTTGGAACCAACCCTTGTAGCCAAAACAACCAAACATGCCAAGGACCCAATGGGACAATGTTTGCAGCCTCAATTAACAACATTTCTTTTGCAATGCCAAACACTGCCTTACTCCAATCCCACTTTTCTGGCCAATCAAGTGGGGTCTACAGTCCTGACTTCCCAGCCAATCCCATAGTCCCATTCAACTATACAGGGACCCCACCAAATGATACTATGGTGAGCAATGGGACAAAGCTGGTAGTGCTGCCATTTAATTCTAGGGTGGAGCTGGTGATGCAGGACACTAGCATTCTTGGTGCTGAGAGCCATCCTCTGCACCTTCATGGGTTCAATTTCTTTGTTGTGGGTCAAGGGTTTGGGAACTTTGACCGGAATAAGGACCCTAAAATGTTCAACCTGGTTGACCCTGTTGAGAGGAACACTGTGGGTGTGCCCTCTGGTGGGTGGGTTGCTATCCGTTTTCTTGCCGATAACCCAGGTGTGTGGTTTATGCATTGCCACCTGGAGATCCACACAAGCTGGGGCTTGAAGATGGGCTGGGTAGTCTTGGATGGCAAGCTTCCCAATCAAAAACTGCTCCCTCCCCCCGCAGATCTTCCCAAATGCTGA

Protein Analysis

582

Amino Acids

64.62

Weight (kDa)

9.5

Isoelectric Point (pI)

34.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 42 - 154 2.5e-42 Multicopper oxidase
Cu-oxidase PF00394 167 - 318 9.6e-44 Multicopper oxidase
Cu-oxidase_2 PF07731 432 - 563 1.8e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000610)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60020 AT5G60020 AT5G60020
fragaria_vesca FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 542
AccBSI CCGCTC 1 cut(s) 994
AccI GTMKAC 2 cut(s) 360, 1281
AccII CGCG 1 cut(s) 465
AciI CCGC 6 cut(s) 465, 623, 992, 1014, 1060, 1725
AclI AACGTT 1 cut(s) 62
AclWI GGATC 1 cut(s) 1639
AcoI YGGCCR 3 cut(s) 817, 901, 1264
AcsI RAATTY 1 cut(s) 1043
AcuI CTGAAG 3 cut(s) 561, 680, 712
AfaI GTAC 1 cut(s) 947
AfiI CCNNNNNNNGG 5 cut(s) 378, 464, 1513, 1577, 1578
AgsI TTSAA 8 cut(s) 119, 655, 1000, 1069, 1321, 1468, 1531, 1666
AhdI GACNNNNNGTC 1 cut(s) 330
AjiI CACGTC 1 cut(s) 247
AjnI CCWGG 6 cut(s) 187, 616, 670, 1533, 1612, 1638
AjuI GAANNNNNNNTTGG 4 cut(s) 635, 667, 839, 871
AluBI AGCT 8 cut(s) 658, 721, 1065, 1088, 1372, 1405, 1656, 1696
AluI AGCT 8 cut(s) 658, 721, 1065, 1088, 1372, 1405, 1656, 1696
Alw26I GTCTC 3 cut(s) 592, 785, 979
AlwI GGATC 1 cut(s) 1639
AlwNI CAGNNNCTG 2 cut(s) 539, 932
AoxI GGCC 8 cut(s) 190, 303, 310, 817, 887, 901, 1132, 1264
ApeKI GCWGC 4 cut(s) 704, 1062, 1199, 1381
ApoI RAATTY 1 cut(s) 1043
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
AspLEI GCGC 1 cut(s) 465
AspS9I GGNCC 9 cut(s) 191, 303, 311, 440, 578, 620, 1178, 1332, 1516
AsuC2I CCSGG 1 cut(s) 816
AsuHPI GGTGA 7 cut(s) 12, 227, 361, 530, 1117, 1366, 1420
AvaII GGWCC 6 cut(s) 440, 578, 620, 1178, 1332, 1516
BaeGI GKGCMC 1 cut(s) 1572
BaeI ACNNNNGTAYC 2 cut(s) 1338, 1371
BalI TGGCCA 2 cut(s) 903, 1266
BbvI GCAGC 4 cut(s) 716, 1074, 1211, 1368
BccI CCATC 5 cut(s) 302, 611, 1452, 1663, 1682
BcgI CGANNNNNNTGC 4 cut(s) 263, 296, 297, 330
BciT130I CCWGG 6 cut(s) 189, 618, 672, 1535, 1614, 1640
BclI TGATCA 1 cut(s) 217
BcnI CCSGG 1 cut(s) 816
BcoDI GTCTC 3 cut(s) 592, 785, 979
BfaI CTAG 5 cut(s) 207, 885, 941, 1395, 1422
BfmI CTRYAG 1 cut(s) 1282
BglII AGATCT 1 cut(s) 1729
BisI GCNGC 4 cut(s) 705, 1063, 1200, 1382
BlsI GCNGC 4 cut(s) 706, 1064, 1201, 1383
Bme1390I CCNGG 7 cut(s) 189, 618, 672, 816, 1535, 1614, 1640
Bme18I GGWCC 6 cut(s) 440, 578, 620, 1178, 1332, 1516
BmeRI GACNNNNNGTC 1 cut(s) 330
BmgBI CACGTC 1 cut(s) 247
BmgT120I GGNCC 9 cut(s) 191, 303, 311, 440, 578, 620, 1178, 1332, 1516
BmiI GGNNCC 8 cut(s) 193, 442, 504, 1141, 1180, 1333, 1334, 1518
BmrFI CCNGG 7 cut(s) 189, 618, 672, 816, 1535, 1614, 1640
BmsI GCATC 3 cut(s) 583, 637, 1401
BplI GAGNNNNNCTC 2 cut(s) 1432, 1464
BpmI CTGGAG 1 cut(s) 1661
BpuEI CTTGAG 1 cut(s) 824
BpuMI CCSGG 1 cut(s) 816
BsaJI CCNNGG 6 cut(s) 616, 814, 904, 1135, 1174, 1612
BsaWI WCCGGW 1 cut(s) 1506
BsaXI ACNNNNNCTCC 2 cut(s) 993, 1023
Bsc4I CCNNNNNNNGG 5 cut(s) 378, 464, 1513, 1577, 1578
Bse1I ACTGG 2 cut(s) 275, 904
Bse3DI GCAATG 5 cut(s) 201, 807, 1233, 1366, 1630
BseBI CCWGG 6 cut(s) 189, 618, 672, 1535, 1614, 1640
BseDI CCNNGG 6 cut(s) 616, 814, 904, 1135, 1174, 1612
BseGI GGATG 3 cut(s) 988, 1444, 1693
BseLI CCNNNNNNNGG 5 cut(s) 378, 464, 1513, 1577, 1578
BseMI GCAATG 5 cut(s) 201, 807, 1233, 1366, 1630
BseMII CTCAG 2 cut(s) 436, 1428
BseNI ACTGG 2 cut(s) 275, 904
BseSI GKGCMC 1 cut(s) 1572
BseXI GCAGC 4 cut(s) 716, 1074, 1211, 1368
BseYI CCCAGC 4 cut(s) 1084, 1297, 1656, 1674
BsgI GTGCAG 1 cut(s) 1436
Bsh1236I CGCG 1 cut(s) 465
Bsh1285I CGRYCG 1 cut(s) 296
BshFI GGCC 8 cut(s) 192, 305, 312, 819, 889, 903, 1134, 1266
BsiEI CGRYCG 1 cut(s) 296
BsiSI CCGG 3 cut(s) 691, 816, 1507
BslFI GGGAC 7 cut(s) 318, 426, 1079, 1201, 1298, 1345, 1378
BslI CCNNNNNNNGG 5 cut(s) 378, 464, 1513, 1577, 1578
BsmAI GTCTC 3 cut(s) 592, 785, 979
BsmFI GGGAC 7 cut(s) 318, 426, 1079, 1201, 1298, 1345, 1378
BsmI GAATGC 4 cut(s) 535, 650, 936, 1425
BsnI GGCC 8 cut(s) 192, 305, 312, 819, 889, 903, 1134, 1266
Bsp1286I GDGCHC 1 cut(s) 1572
Bsp143I GATC 5 cut(s) 217, 293, 425, 1644, 1729
BspACI CCGC 6 cut(s) 465, 623, 992, 1014, 1060, 1725
BspANI GGCC 8 cut(s) 192, 305, 312, 819, 889, 903, 1134, 1266
BspCNI CTCAG 2 cut(s) 435, 1429
BspFNI CGCG 1 cut(s) 465
BspHI TCATGA 1 cut(s) 876
BspLI GGNNCC 8 cut(s) 193, 442, 504, 1141, 1180, 1333, 1334, 1518
BspPI GGATC 1 cut(s) 1639
BspQI GCTCTTC 1 cut(s) 1001
BsrBI CCGCTC 1 cut(s) 994
BsrDI GCAATG 5 cut(s) 201, 807, 1233, 1366, 1630
BsrI ACTGG 2 cut(s) 275, 904
BssECI CCNNGG 6 cut(s) 616, 814, 904, 1135, 1174, 1612
BssMI GATC 5 cut(s) 217, 293, 425, 1644, 1729
BssT1I CCWWGG 3 cut(s) 904, 1135, 1174
Bst2UI CCWGG 6 cut(s) 189, 618, 672, 1535, 1614, 1640
Bst4CI ACNGT 5 cut(s) 172, 353, 928, 1286, 1561
Bst6I CTCTTC 2 cut(s) 977, 1001
BstAPI GCANNNNNTGC 1 cut(s) 562
BstC8I GCNNGC 5 cut(s) 94, 405, 558, 934, 1694
BstDEI CTNAG 3 cut(s) 35, 422, 1437
BstF5I GGATG 3 cut(s) 988, 1444, 1693
BstFNI CGCG 1 cut(s) 465
BstHHI GCGC 1 cut(s) 465
BstKTI GATC 5 cut(s) 220, 296, 428, 1647, 1732
BstMAI GTCTC 3 cut(s) 592, 785, 979
BstMBI GATC 5 cut(s) 217, 293, 425, 1644, 1729
BstMCI CGRYCG 1 cut(s) 296
BstMWI GCNNNNNNNGC 4 cut(s) 469, 562, 1378, 1411
BstNI CCWGG 6 cut(s) 189, 618, 672, 1535, 1614, 1640
BstNSI RCATGY 3 cut(s) 86, 407, 1173
BstSCI CCNGG 7 cut(s) 187, 616, 670, 814, 1533, 1612, 1638
BstSFI CTRYAG 1 cut(s) 1282
BstSLI GKGCMC 1 cut(s) 1572
BstUI CGCG 1 cut(s) 465
BstV1I GCAGC 4 cut(s) 716, 1074, 1211, 1368
BstX2I RGATCY 2 cut(s) 1644, 1729
BstXI CCANNNNNNTGG 4 cut(s) 275, 1262, 1274, 1620
BstYI RGATCY 2 cut(s) 1644, 1729
BsuRI GGCC 8 cut(s) 192, 305, 312, 819, 889, 903, 1134, 1266
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 3 cut(s) 988, 1444, 1693
BtsI GCAGTG 1 cut(s) 1236
BtsIMutI CAGTG 4 cut(s) 177, 268, 1236, 1557
Cac8I GCNNGC 5 cut(s) 94, 405, 558, 934, 1694
CaiI CAGNNNCTG 2 cut(s) 539, 932
CciI TCATGA 1 cut(s) 876
CfoI GCGC 1 cut(s) 465
Cfr13I GGNCC 9 cut(s) 191, 303, 311, 440, 578, 620, 1178, 1332, 1516
CseI GACGC 1 cut(s) 776
CsiI ACCWGGT 1 cut(s) 1533
Csp6I GTAC 1 cut(s) 946
CviAII CATG 7 cut(s) 83, 275, 404, 417, 877, 1170, 1460
CviQI GTAC 1 cut(s) 946
DdeI CTNAG 3 cut(s) 35, 422, 1437
DpnI GATC 5 cut(s) 219, 295, 427, 1646, 1731
DpnII GATC 5 cut(s) 217, 293, 425, 1644, 1729
DrdI GACNNNNNNGTC 1 cut(s) 542
DriI GACNNNNNGTC 1 cut(s) 330
DseDI GACNNNNNNGTC 1 cut(s) 542
EaeI YGGCCR 3 cut(s) 817, 901, 1264
Eam1104I CTCTTC 2 cut(s) 977, 1001
Eam1105I GACNNNNNGTC 1 cut(s) 330
EarI CTCTTC 2 cut(s) 977, 1001
Eco130I CCWWGG 3 cut(s) 904, 1135, 1174
Eco147I AGGCCT 1 cut(s) 1134
Eco47I GGWCC 6 cut(s) 440, 578, 620, 1178, 1332, 1516
Eco57I CTGAAG 3 cut(s) 561, 680, 712
EcoO109I RGGNCCY 3 cut(s) 1178, 1332, 1516
EcoRII CCWGG 6 cut(s) 187, 616, 670, 1533, 1612, 1638
EcoT14I CCWWGG 3 cut(s) 904, 1135, 1174
EcoT22I ATGCAT 2 cut(s) 652, 1632
ErhI CCWWGG 3 cut(s) 904, 1135, 1174
FaeI CATG 7 cut(s) 86, 278, 407, 420, 880, 1173, 1463
FaqI GGGAC 7 cut(s) 318, 426, 1079, 1201, 1298, 1345, 1378
FatI CATG 7 cut(s) 82, 274, 403, 416, 876, 1169, 1459
FauI CCCGC 2 cut(s) 1021, 1732
FauNDI CATATG 2 cut(s) 319, 892
FbaI TGATCA 1 cut(s) 217
FblI GTMKAC 2 cut(s) 360, 1281
Fnu4HI GCNGC 4 cut(s) 705, 1063, 1200, 1382
FokI GGATG 3 cut(s) 975, 1431, 1700
Fsp4HI GCNGC 4 cut(s) 705, 1063, 1200, 1382
FspBI CTAG 5 cut(s) 207, 885, 941, 1395, 1422
GlaI GCGC 1 cut(s) 464
GluI GCNGC 4 cut(s) 705, 1063, 1200, 1382
GsaI CCCAGC 4 cut(s) 1088, 1301, 1660, 1678
GsuI CTGGAG 1 cut(s) 1661
HaeIII GGCC 8 cut(s) 192, 305, 312, 819, 889, 903, 1134, 1266
HapII CCGG 3 cut(s) 691, 816, 1507
HgaI GACGC 1 cut(s) 776
HhaI GCGC 1 cut(s) 465
Hin1II CATG 7 cut(s) 86, 278, 407, 420, 880, 1173, 1463
Hin6I GCGC 1 cut(s) 463
HinP1I GCGC 1 cut(s) 463
HincII GTYRAC 2 cut(s) 241, 1540
HindII GTYRAC 2 cut(s) 241, 1540
HindIII AAGCTT 1 cut(s) 1694
HinfI GANTC 4 cut(s) 198, 612, 793, 950
HpaI GTTAAC 1 cut(s) 241
HpaII CCGG 3 cut(s) 691, 816, 1507
HphI GGTGA 7 cut(s) 12, 227, 361, 530, 1117, 1366, 1420
Hpy166II GTNNAC 6 cut(s) 10, 175, 241, 361, 1282, 1540
Hpy188I TCNGA 2 cut(s) 425, 592
Hpy188III TCNNGA 5 cut(s) 790, 841, 877, 941, 1289
Hpy8I GTNNAC 6 cut(s) 10, 175, 241, 361, 1282, 1540
Hpy99I CGWCG 2 cut(s) 719, 770
HpyAV CCTTC 6 cut(s) 23, 64, 655, 695, 796, 1466
HpyCH4III ACNGT 5 cut(s) 172, 353, 928, 1286, 1561
HpyCH4IV ACGT 3 cut(s) 62, 135, 246
HpyF10VI GCNNNNNNNGC 4 cut(s) 469, 562, 1378, 1411
HpyF3I CTNAG 3 cut(s) 35, 422, 1437
HpySE526I ACGT 3 cut(s) 62, 135, 246
Hsp92II CATG 7 cut(s) 86, 278, 407, 420, 880, 1173, 1463
HspAI GCGC 1 cut(s) 463
KflI GGGWCCC 1 cut(s) 1332
Ksp22I TGATCA 1 cut(s) 217
KspAI GTTAAC 1 cut(s) 241
Kzo9I GATC 5 cut(s) 217, 293, 425, 1644, 1729
LguI GCTCTTC 1 cut(s) 1001
LmnI GCTCC 2 cut(s) 1402, 1719
Lsp1109I GCAGC 4 cut(s) 716, 1074, 1211, 1368
LweI GCATC 3 cut(s) 583, 637, 1401
MabI ACCWGGT 1 cut(s) 1533
MaeI CTAG 5 cut(s) 207, 885, 941, 1395, 1422
MaeII ACGT 3 cut(s) 62, 135, 246
MaeIII GTNAC 4 cut(s) 136, 149, 322, 895
MalI GATC 5 cut(s) 219, 295, 427, 1646, 1731
MbiI CCGCTC 1 cut(s) 994
MboI GATC 5 cut(s) 217, 293, 425, 1644, 1729
MboII GAAGA 7 cut(s) 718, 827, 988, 994, 1114, 1678, 1724
MfeI CAATTG 1 cut(s) 631
MflI RGATCY 2 cut(s) 1644, 1729
MhlI GDGCHC 1 cut(s) 1572
MlsI TGGCCA 2 cut(s) 903, 1266
MluNI TGGCCA 2 cut(s) 903, 1266
MlyI GAGTC 2 cut(s) 606, 787
Mox20I TGGCCA 2 cut(s) 903, 1266
Mph1103I ATGCAT 2 cut(s) 652, 1632
MscI TGGCCA 2 cut(s) 903, 1266
MseI TTAA 5 cut(s) 231, 240, 446, 1209, 1389
MslI CAYNNNNRTG 2 cut(s) 273, 1458
Msp20I TGGCCA 2 cut(s) 903, 1266
MspI CCGG 3 cut(s) 691, 816, 1507
MspR9I CCNGG 7 cut(s) 189, 618, 672, 816, 1535, 1614, 1640
MunI CAATTG 1 cut(s) 631
Mva1269I GAATGC 4 cut(s) 535, 650, 936, 1425
MvaI CCWGG 6 cut(s) 189, 618, 672, 1535, 1614, 1640
MvnI CGCG 1 cut(s) 465
MwoI GCNNNNNNNGC 4 cut(s) 469, 562, 1378, 1411
NciI CCSGG 1 cut(s) 816
NdeI CATATG 2 cut(s) 319, 892
NdeII GATC 5 cut(s) 217, 293, 425, 1644, 1729
NlaIII CATG 7 cut(s) 86, 278, 407, 420, 880, 1173, 1463
NlaIV GGNNCC 8 cut(s) 193, 442, 504, 1141, 1180, 1333, 1334, 1518
NmuCI GTSAC 4 cut(s) 136, 149, 322, 895
NsiI ATGCAT 2 cut(s) 652, 1632
NspI RCATGY 3 cut(s) 86, 407, 1173
PaeI GCATGC 1 cut(s) 407
PagI TCATGA 1 cut(s) 876
PceI AGGCCT 1 cut(s) 1134
PciSI GCTCTTC 1 cut(s) 1001
PcsI WCGNNNNNNNCGW 1 cut(s) 289
PctI GAATGC 4 cut(s) 535, 650, 936, 1425
PfeI GAWTC 2 cut(s) 198, 950
PkrI GCNGC 4 cut(s) 706, 1064, 1201, 1383
Ple19I CGATCG 1 cut(s) 296
PleI GAGTC 2 cut(s) 606, 787
PpsI GAGTC 2 cut(s) 606, 787
PpuMI RGGWCCY 3 cut(s) 1178, 1332, 1516
Psp1406I AACGTT 1 cut(s) 62
Psp5II RGGWCCY 3 cut(s) 1178, 1332, 1516
Psp6I CCWGG 6 cut(s) 187, 616, 670, 1533, 1612, 1638
PspFI CCCAGC 4 cut(s) 1084, 1297, 1656, 1674
PspGI CCWGG 6 cut(s) 187, 616, 670, 1533, 1612, 1638
PspN4I GGNNCC 8 cut(s) 193, 442, 504, 1141, 1180, 1333, 1334, 1518
PspPI GGNCC 9 cut(s) 191, 303, 311, 440, 578, 620, 1178, 1332, 1516
PspPPI RGGWCCY 3 cut(s) 1178, 1332, 1516
PstNI CAGNNNCTG 2 cut(s) 539, 932
PsuI RGATCY 2 cut(s) 1644, 1729
PvuI CGATCG 1 cut(s) 296
RsaI GTAC 1 cut(s) 947
RsaNI GTAC 1 cut(s) 946
RseI CAYNNNNRTG 2 cut(s) 273, 1458
SapI GCTCTTC 1 cut(s) 1001
SaqAI TTAA 5 cut(s) 231, 240, 446, 1209, 1389
SatI GCNGC 4 cut(s) 705, 1063, 1200, 1382
Sau3AI GATC 5 cut(s) 217, 293, 425, 1644, 1729
Sau96I GGNCC 9 cut(s) 191, 303, 311, 440, 578, 620, 1178, 1332, 1516
SchI GAGTC 2 cut(s) 606, 787
ScrFI CCNGG 7 cut(s) 189, 618, 672, 816, 1535, 1614, 1640
SduI GDGCHC 1 cut(s) 1572
SexAI ACCWGGT 1 cut(s) 1533
SfaNI GCATC 3 cut(s) 583, 637, 1401
SfcI CTRYAG 1 cut(s) 1282
SinI GGWCC 6 cut(s) 440, 578, 620, 1178, 1332, 1516
SmiMI CAYNNNNRTG 2 cut(s) 273, 1458
SmlI CTYRAG 1 cut(s) 839
SmoI CTYRAG 1 cut(s) 839
SphI GCATGC 1 cut(s) 407
SseBI AGGCCT 1 cut(s) 1134
SsiI CCGC 6 cut(s) 465, 623, 992, 1014, 1060, 1725
SspMI CTAG 5 cut(s) 207, 885, 941, 1395, 1422
StuI AGGCCT 1 cut(s) 1134
StyD4I CCNGG 7 cut(s) 187, 616, 670, 814, 1533, 1612, 1638
StyI CCWWGG 3 cut(s) 904, 1135, 1174
TaaI ACNGT 5 cut(s) 172, 353, 928, 1286, 1561
TaiI ACGT 3 cut(s) 65, 138, 249
TaqI TCGA 4 cut(s) 283, 292, 667, 789
TfiI GAWTC 2 cut(s) 198, 950
Tru1I TTAA 5 cut(s) 231, 240, 446, 1209, 1389
Tru9I TTAA 5 cut(s) 231, 240, 446, 1209, 1389
TscAI CASTG 4 cut(s) 177, 275, 1243, 1564
TseFI GTSAC 4 cut(s) 136, 149, 322, 895
TseI GCWGC 4 cut(s) 704, 1062, 1199, 1381
Tsp45I GTSAC 4 cut(s) 136, 149, 322, 895
TspDTI ATGAA 4 cut(s) 46, 405, 865, 1448
TspGWI ACGGA 1 cut(s) 1583
TspRI CASTG 4 cut(s) 177, 275, 1243, 1564
VpaK11BI GGWCC 6 cut(s) 440, 578, 620, 1178, 1332, 1516
XapI RAATTY 1 cut(s) 1043
XbaI TCTAGA 1 cut(s) 940
XceI RCATGY 3 cut(s) 86, 407, 1173
XcmI CCANNNNNNNNNTGG 1 cut(s) 1181
XmiI GTMKAC 2 cut(s) 360, 1281
XspI CTAG 5 cut(s) 207, 885, 941, 1395, 1422
Zsp2I ATGCAT 2 cut(s) 652, 1632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.