FvH4_3g34100

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000610
Physical Location & Seq
Forward (+)
29509086 .. 29512943
3858 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g34100.t1

Sequence Viewer

Length: 1584 bp
ATGGGTGTTGCTCTTTTTTCACTTGTTAGGCTCTTTGTTCTCTGTTGTATCACATTGGGTCTCATTCCTCAGCTAGCTCTTGCAAGCATTACAAGACACTACACCTTTGATGTTCAGCTGCAAAATATGACACGGTTGTGCCACACGAAGAGCATTGTAACCATAAACGGTCAATTTCCCGGGCCTCGGATTGTTGCTAGGGAGGGCGATCACCTCCTCATCAAAGTTGTCAACCATGTCCAAAGCAACATCTCCATCCATTGGCATGGAATTCGACAGCTTCAAACTGGGTGGGCTGATGGTCCTGCATACATTACGCAATGCCCTATACAAACTGGCAACAGTTATGTGTACAATTTCACCATTGTAGGCCAAAGAGGCACTCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACAATCTATGGCCCCCTAATCATTCTTCCCAAGCGTGGTGTTCCTTATCCATTTACCAAACCCTATAAGGAAGTTCCCATCATCTTTGGAGAATGGTGGAATGCAGATACTGAAGCAGTCATAAAGCAGGCCTTGCAAACCGGTGGAGGGCCAAATGTTTCTGATGCTTACACAATCAATGGACTCCCAGGGCCTTTGTATAACTGCTCTGCTAAAGACACTTTCAAGCTGAAGGTTCAAGCTGGAAAGACATACATGTTGCGCATAATCAACGCAGCACTGAACGACGAGCTCTTCTTCAGCATTGCAAACCACACCCTCAAAGTGGTGGAAGCTGATGCAGTTTACGTCAAACCTTTTGACACCAACACCATTCTCATTGCCCCCGGACAAACCACTAATGTTCTTCTCAAAACCAAACCCAGCCACCCAAACGCCTCATTTTTCATGACTGCAAGGCCGTATGTGACTGGTCTAGGCACCTTTGACAACTCCACTGTTGCTGGCATTCTAGAATATGAGTCAACTGCACTTCATTCAACCCTTCCAATGAAGAAACTTCCACTCCACAAACCAATTCTCCCAGTTCTAAATGACACGTCGTTTGCAACAAAATTCTCCAACAAACTCCGTAGCTTGAACACTCCCCAGTTCCCAGCTAATGTTCCACAGAAAGTTGACAAGCGTTTGTTCTTCACAATAGGGCTTGGAACCAACCCATGTAGCCAGCAGAAGCACAACAACCAGACTTCACAGCTGAACAATACCAATGTCAGCAATGGCACAAAGTTAATGGTGCTTCCCTTTAACACTAGTGTGGAGTTGGTGTTGCAGGATACCAGTATTCTTGGTGCTGAAAGTCATCCTCTTCATCTTCATGGCTTTAATTTCTTTGTTGTTGGTCAAGGTTTTGGCAACTTCGACCAAAATAAGGACCCTAAGAAGTTCAATCTGATCGACCCTGTTGAGAGAAACACCGTGGGTGTGCCCTCCGGCGGATGGGTTGCTATTCGGTTTCTAGCAGACAATCCAGGTGTATGGTTTATGCATTGCCACCTTGAGATCCATACTAGCTGGGGATTGAGGATGGCTTGGCTTGTCTTGGACGGAAAGCTTCCCAATCAAAAGTTGCTTCCTCCCCCACTTGATCTTCCCAAGTGTTGA

Protein Analysis

528

Amino Acids

58.62

Weight (kDa)

9.34

Isoelectric Point (pI)

30.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 38 - 151 6.5e-42 Multicopper oxidase
Cu-oxidase PF00394 164 - 315 1.2e-44 Multicopper oxidase
Cu-oxidase_2 PF07731 387 - 509 2.4e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000610)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60020 AT5G60020 AT5G60020
fragaria_vesca FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 683
AccB1I GGYRCC 1 cut(s) 899
AccB7I CCANNNNNTGG 1 cut(s) 261
AciI CCGC 1 cut(s) 1416
AclWI GGATC 1 cut(s) 1477
AcsI RAATTY 2 cut(s) 270, 1034
AcuI CTGAAG 3 cut(s) 552, 671, 703
AfaI GTAC 1 cut(s) 353
AfiI CCNNNNNNNGG 8 cut(s) 186, 261, 455, 567, 745, 1351, 1415, 1419
AflIII ACRYGT 2 cut(s) 675, 1017
AgeI ACCGGT 1 cut(s) 560
AgsI TTSAA 6 cut(s) 284, 646, 659, 960, 1060, 1369
AhlI ACTAGT 1 cut(s) 1232
AjiI CACGTC 1 cut(s) 1020
AjnI CCWGG 2 cut(s) 607, 1450
AleI CACNNNNGTG 2 cut(s) 136, 1235
Alw21I GWGCWC 1 cut(s) 714
Alw26I GTCTC 1 cut(s) 65
AlwI GGATC 1 cut(s) 1477
AlwNI CAGNNNCTG 1 cut(s) 530
Ama87I CYCGRG 1 cut(s) 179
AoxI GGCC 7 cut(s) 182, 370, 430, 549, 569, 611, 878
ApeKI GCWGC 2 cut(s) 118, 695
ApoI RAATTY 2 cut(s) 270, 1034
ArsI GACNNNNNNTTYG 2 cut(s) 1007, 1039
AsiGI ACCGGT 1 cut(s) 560
AspLEI GCGC 1 cut(s) 684
AspS9I GGNCC 6 cut(s) 182, 302, 431, 569, 611, 1354
AsuC2I CCSGG 3 cut(s) 180, 181, 807
AsuHPI GGTGA 2 cut(s) 203, 352
AsuNHI GCTAGC 1 cut(s) 73
AvaI CYCGRG 1 cut(s) 179
AvaII GGWCC 2 cut(s) 302, 1354
BaeGI GKGCMC 1 cut(s) 1410
BanI GGYRCC 1 cut(s) 899
BanII GRGCYC 1 cut(s) 714
Bbv12I GWGCWC 1 cut(s) 714
BbvCI CCTCAGC 1 cut(s) 69
BbvI GCAGC 2 cut(s) 105, 707
BccI CCATC 5 cut(s) 263, 293, 506, 1413, 1501
BceAI ACGGC 1 cut(s) 865
BcgI CGANNNNNNTGC 2 cut(s) 254, 288
BciT130I CCWGG 2 cut(s) 609, 1452
BciVI GTATCC 1 cut(s) 1249
BcnI CCSGG 3 cut(s) 180, 181, 807
BcoDI GTCTC 1 cut(s) 65
BcuI ACTAGT 1 cut(s) 1232
BfaI CTAG 7 cut(s) 74, 198, 896, 932, 1233, 1439, 1491
BfuI GTATCC 1 cut(s) 1249
BglI GCCNNNNNGGC 1 cut(s) 378
BisI GCNGC 2 cut(s) 119, 696
BlsI GCNGC 2 cut(s) 120, 697
Bme1390I CCNGG 5 cut(s) 180, 181, 609, 807, 1452
Bme18I GGWCC 2 cut(s) 302, 1354
BmeT110I CYCGRG 1 cut(s) 179
BmgBI CACGTC 1 cut(s) 1020
BmgT120I GGNCC 6 cut(s) 182, 302, 431, 569, 611, 1354
BmiI GGNNCC 4 cut(s) 433, 901, 1132, 1356
BmrFI CCNGG 5 cut(s) 180, 181, 609, 807, 1452
BmrI ACTGGG 3 cut(s) 297, 998, 1063
BmsI GCATC 2 cut(s) 574, 748
BmtI GCTAGC 1 cut(s) 77
BmuI ACTGGG 3 cut(s) 297, 998, 1063
Bpu10I CCTNAGC 1 cut(s) 69
BpuEI CTTGAG 1 cut(s) 1499
BpuMI CCSGG 3 cut(s) 180, 181, 807
BsaI GGTCTC 1 cut(s) 65
BsaJI CCNNGG 6 cut(s) 179, 185, 607, 608, 805, 1398
BsaWI WCCGGW 1 cut(s) 560
BsaXI ACNNNNNCTCC 6 cut(s) 969, 984, 999, 1014, 1232, 1262
Bsc4I CCNNNNNNNGG 8 cut(s) 186, 261, 455, 567, 745, 1351, 1415, 1419
Bse118I RCCGGY 1 cut(s) 560
Bse1I ACTGG 6 cut(s) 292, 340, 895, 1004, 1069, 1260
Bse3DI GCAATG 5 cut(s) 326, 723, 798, 1204, 1468
BseBI CCWGG 2 cut(s) 609, 1452
BseDI CCNNGG 6 cut(s) 179, 185, 607, 608, 805, 1398
BseGI GGATG 4 cut(s) 255, 1282, 1424, 1512
BseLI CCNNNNNNNGG 8 cut(s) 186, 261, 455, 567, 745, 1351, 1415, 1419
BseMI GCAATG 5 cut(s) 326, 723, 798, 1204, 1468
BseMII CTCAG 1 cut(s) 83
BseNI ACTGG 6 cut(s) 292, 340, 895, 1004, 1069, 1260
BseRI GAGGAG 1 cut(s) 206
BseSI GKGCMC 1 cut(s) 1410
BseXI GCAGC 2 cut(s) 105, 707
BseYI CCCAGC 3 cut(s) 842, 1075, 1494
BsgI GTGCAG 1 cut(s) 933
BshFI GGCC 7 cut(s) 184, 372, 432, 551, 571, 613, 880
BshNI GGYRCC 1 cut(s) 899
BshTI ACCGGT 1 cut(s) 560
BsiHKAI GWGCWC 1 cut(s) 714
BsiHKCI CYCGRG 1 cut(s) 179
BsiSI CCGG 4 cut(s) 180, 561, 807, 1413
BslI CCNNNNNNNGG 8 cut(s) 186, 261, 455, 567, 745, 1351, 1415, 1419
BsmAI GTCTC 1 cut(s) 65
BsmI GAATGC 2 cut(s) 526, 927
BsnI GGCC 7 cut(s) 184, 372, 432, 551, 571, 613, 880
Bso31I GGTCTC 1 cut(s) 65
BsoBI CYCGRG 1 cut(s) 179
Bsp1286I GDGCHC 2 cut(s) 714, 1410
Bsp1407I TGTACA 1 cut(s) 351
Bsp143I GATC 5 cut(s) 208, 416, 1374, 1482, 1567
BspACI CCGC 1 cut(s) 1416
BspANI GGCC 7 cut(s) 184, 372, 432, 551, 571, 613, 880
BspCNI CTCAG 1 cut(s) 82
BspHI TCATGA 1 cut(s) 867
BspLI GGNNCC 4 cut(s) 433, 901, 1132, 1356
BspOI GCTAGC 1 cut(s) 77
BspPI GGATC 1 cut(s) 1477
BspQI GCTCTTC 2 cut(s) 143, 719
BspT107I GGYRCC 1 cut(s) 899
BspTNI GGTCTC 1 cut(s) 65
BsrDI GCAATG 5 cut(s) 326, 723, 798, 1204, 1468
BsrFI RCCGGY 1 cut(s) 560
BsrGI TGTACA 1 cut(s) 351
BsrI ACTGG 6 cut(s) 292, 340, 895, 1004, 1069, 1260
BssAI RCCGGY 1 cut(s) 560
BssECI CCNNGG 6 cut(s) 179, 185, 607, 608, 805, 1398
BssMI GATC 5 cut(s) 208, 416, 1374, 1482, 1567
Bst2UI CCWGG 2 cut(s) 609, 1452
Bst4CI ACNGT 5 cut(s) 135, 170, 344, 919, 1399
Bst6I CTCTTC 3 cut(s) 143, 719, 1293
BstAPI GCANNNNNTGC 1 cut(s) 553
BstAUI TGTACA 1 cut(s) 351
BstC8I GCNNGC 6 cut(s) 75, 85, 396, 549, 925, 1148
BstDEI CTNAG 3 cut(s) 69, 413, 1359
BstDSI CCRYGG 1 cut(s) 1398
BstF5I GGATG 4 cut(s) 255, 1282, 1424, 1512
BstHHI GCGC 1 cut(s) 684
BstKTI GATC 5 cut(s) 211, 419, 1377, 1485, 1570
BstMAI GTCTC 1 cut(s) 65
BstMBI GATC 5 cut(s) 208, 416, 1374, 1482, 1567
BstMWI GCNNNNNNNGC 2 cut(s) 378, 553
BstNI CCWGG 2 cut(s) 609, 1452
BstNSI RCATGY 2 cut(s) 398, 679
BstSCI CCNGG 5 cut(s) 178, 179, 607, 805, 1450
BstSLI GKGCMC 1 cut(s) 1410
BstV1I GCAGC 2 cut(s) 105, 707
BstX2I RGATCY 1 cut(s) 1482
BstXI CCANNNNNNTGG 2 cut(s) 266, 1458
BstYI RGATCY 1 cut(s) 1482
BsuI GTATCC 1 cut(s) 1249
BsuRI GGCC 7 cut(s) 184, 372, 432, 551, 571, 613, 880
BtgI CCRYGG 1 cut(s) 1398
BtrI CACGTC 1 cut(s) 1020
BtsCI GGATG 4 cut(s) 255, 1282, 1424, 1512
BtsIMutI CAGTG 2 cut(s) 698, 915
Cac8I GCNNGC 6 cut(s) 75, 85, 396, 549, 925, 1148
CaiI CAGNNNCTG 1 cut(s) 530
CciI TCATGA 1 cut(s) 867
CfoI GCGC 1 cut(s) 684
Cfr10I RCCGGY 1 cut(s) 560
Cfr13I GGNCC 6 cut(s) 182, 302, 431, 569, 611, 1354
Cfr9I CCCGGG 1 cut(s) 179
Csp6I GTAC 1 cut(s) 352
CspAI ACCGGT 1 cut(s) 560
CspCI CAANNNNNGTGG 2 cut(s) 272, 307
CviAII CATG 8 cut(s) 236, 266, 395, 408, 676, 868, 1140, 1298
CviQI GTAC 1 cut(s) 352
DdeI CTNAG 3 cut(s) 69, 413, 1359
DpnI GATC 5 cut(s) 210, 418, 1376, 1484, 1569
DpnII GATC 5 cut(s) 208, 416, 1374, 1482, 1567
Eam1104I CTCTTC 3 cut(s) 143, 719, 1293
EarI CTCTTC 3 cut(s) 143, 719, 1293
EciI GGCGGA 1 cut(s) 1431
Ecl136II GAGCTC 1 cut(s) 712
Eco147I AGGCCT 1 cut(s) 551
Eco24I GRGCYC 1 cut(s) 714
Eco31I GGTCTC 1 cut(s) 65
Eco47I GGWCC 2 cut(s) 302, 1354
Eco53kI GAGCTC 1 cut(s) 712
Eco57I CTGAAG 3 cut(s) 552, 671, 703
Eco88I CYCGRG 1 cut(s) 179
EcoICRI GAGCTC 1 cut(s) 712
EcoO109I RGGNCCY 2 cut(s) 611, 1354
EcoRI GAATTC 1 cut(s) 270
EcoRII CCWGG 2 cut(s) 607, 1450
EcoT22I ATGCAT 1 cut(s) 1470
EcoT38I GRGCYC 1 cut(s) 714
FaeI CATG 8 cut(s) 239, 269, 398, 411, 679, 871, 1143, 1301
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FatI CATG 8 cut(s) 235, 265, 394, 407, 675, 867, 1139, 1297
Fnu4HI GCNGC 2 cut(s) 119, 696
FokI GGATG 4 cut(s) 242, 1269, 1431, 1519
FriOI GRGCYC 1 cut(s) 714
Fsp4HI GCNGC 2 cut(s) 119, 696
FspBI CTAG 7 cut(s) 74, 198, 896, 932, 1233, 1439, 1491
FspI TGCGCA 1 cut(s) 683
GlaI GCGC 1 cut(s) 683
GluI GCNGC 2 cut(s) 119, 696
GsaI CCCAGC 3 cut(s) 846, 1079, 1498
HaeIII GGCC 7 cut(s) 184, 372, 432, 551, 571, 613, 880
HapII CCGG 4 cut(s) 180, 561, 807, 1413
HhaI GCGC 1 cut(s) 684
Hin1II CATG 8 cut(s) 239, 269, 398, 411, 679, 871, 1143, 1301
Hin6I GCGC 1 cut(s) 682
HinP1I GCGC 1 cut(s) 682
HincII GTYRAC 3 cut(s) 232, 945, 1099
HindII GTYRAC 3 cut(s) 232, 945, 1099
HindIII AAGCTT 1 cut(s) 1532
HinfI GANTC 2 cut(s) 603, 941
HpaII CCGG 4 cut(s) 180, 561, 807, 1413
HphI GGTGA 2 cut(s) 203, 352
Hpy166II GTNNAC 5 cut(s) 232, 352, 766, 945, 1099
Hpy188I TCNGA 3 cut(s) 189, 583, 1374
Hpy188III TCNNGA 2 cut(s) 868, 932
Hpy8I GTNNAC 5 cut(s) 232, 352, 766, 945, 1099
Hpy99I CGWCG 2 cut(s) 710, 1024
HpyAV CCTTC 2 cut(s) 646, 974
HpyCH4III ACNGT 5 cut(s) 135, 170, 344, 919, 1399
HpyCH4IV ACGT 2 cut(s) 768, 1019
HpyF10VI GCNNNNNNNGC 2 cut(s) 378, 553
HpyF3I CTNAG 3 cut(s) 69, 413, 1359
HpySE526I ACGT 2 cut(s) 768, 1019
Hsp92II CATG 8 cut(s) 239, 269, 398, 411, 679, 871, 1143, 1301
HspAI GCGC 1 cut(s) 682
Kzo9I GATC 5 cut(s) 208, 416, 1374, 1482, 1567
LguI GCTCTTC 2 cut(s) 143, 719
Lsp1109I GCAGC 2 cut(s) 105, 707
LweI GCATC 2 cut(s) 574, 748
MaeI CTAG 7 cut(s) 74, 198, 896, 932, 1233, 1439, 1491
MaeII ACGT 2 cut(s) 768, 1019
MaeIII GTNAC 2 cut(s) 157, 886
MalI GATC 5 cut(s) 210, 418, 1376, 1484, 1569
MboI GATC 5 cut(s) 208, 416, 1374, 1482, 1567
MflI RGATCY 1 cut(s) 1482
MhlI GDGCHC 2 cut(s) 714, 1410
MluCI AATT 6 cut(s) 173, 270, 355, 996, 1034, 1306
MlyI GAGTC 2 cut(s) 597, 950
MmeI TCCRAC 1 cut(s) 1065
Mph1103I ATGCAT 1 cut(s) 1470
MseI TTAA 3 cut(s) 1211, 1227, 1305
MslI CAYNNNNRTG 4 cut(s) 136, 264, 1235, 1296
MspA1I CMGCKG 2 cut(s) 118, 1177
MspI CCGG 4 cut(s) 180, 561, 807, 1413
MspR9I CCNGG 5 cut(s) 180, 181, 609, 807, 1452
Mva1269I GAATGC 2 cut(s) 526, 927
MvaI CCWGG 2 cut(s) 609, 1452
MwoI GCNNNNNNNGC 2 cut(s) 378, 553
NciI CCSGG 3 cut(s) 180, 181, 807
NdeII GATC 5 cut(s) 208, 416, 1374, 1482, 1567
NheI GCTAGC 1 cut(s) 73
NlaIII CATG 8 cut(s) 239, 269, 398, 411, 679, 871, 1143, 1301
NlaIV GGNNCC 4 cut(s) 433, 901, 1132, 1356
NmuCI GTSAC 1 cut(s) 886
NsbI TGCGCA 1 cut(s) 683
NsiI ATGCAT 1 cut(s) 1470
NspI RCATGY 2 cut(s) 398, 679
OliI CACNNNNGTG 2 cut(s) 136, 1235
PaeI GCATGC 1 cut(s) 398
PagI TCATGA 1 cut(s) 867
PasI CCCWGGG 1 cut(s) 608
PceI AGGCCT 1 cut(s) 551
PciI ACATGT 1 cut(s) 675
PciSI GCTCTTC 2 cut(s) 143, 719
PctI GAATGC 2 cut(s) 526, 927
PflMI CCANNNNNTGG 1 cut(s) 261
PinAI ACCGGT 1 cut(s) 560
PkrI GCNGC 2 cut(s) 120, 697
PleI GAGTC 2 cut(s) 597, 949
PpsI GAGTC 2 cut(s) 597, 949
PpuMI RGGWCCY 1 cut(s) 1354
PscI ACATGT 1 cut(s) 675
Psp124BI GAGCTC 1 cut(s) 714
Psp5II RGGWCCY 1 cut(s) 1354
Psp6I CCWGG 2 cut(s) 607, 1450
PspFI CCCAGC 3 cut(s) 842, 1075, 1494
PspGI CCWGG 2 cut(s) 607, 1450
PspN4I GGNNCC 4 cut(s) 433, 901, 1132, 1356
PspPI GGNCC 6 cut(s) 182, 302, 431, 569, 611, 1354
PspPPI RGGWCCY 1 cut(s) 1354
PstNI CAGNNNCTG 1 cut(s) 530
PsuI RGATCY 1 cut(s) 1482
PvuII CAGCTG 2 cut(s) 118, 1177
RsaI GTAC 1 cut(s) 353
RsaNI GTAC 1 cut(s) 352
RseI CAYNNNNRTG 4 cut(s) 136, 264, 1235, 1296
SacI GAGCTC 1 cut(s) 714
SapI GCTCTTC 2 cut(s) 143, 719
SaqAI TTAA 3 cut(s) 1211, 1227, 1305
SatI GCNGC 2 cut(s) 119, 696
Sau3AI GATC 5 cut(s) 208, 416, 1374, 1482, 1567
Sau96I GGNCC 6 cut(s) 182, 302, 431, 569, 611, 1354
SchI GAGTC 2 cut(s) 597, 950
ScrFI CCNGG 5 cut(s) 180, 181, 609, 807, 1452
SduI GDGCHC 2 cut(s) 714, 1410
SfaNI GCATC 2 cut(s) 574, 748
SinI GGWCC 2 cut(s) 302, 1354
SmaI CCCGGG 1 cut(s) 181
SmiMI CAYNNNNRTG 4 cut(s) 136, 264, 1235, 1296
SmlI CTYRAG 1 cut(s) 1478
SmoI CTYRAG 1 cut(s) 1478
SpeI ACTAGT 1 cut(s) 1232
SphI GCATGC 1 cut(s) 398
Sse9I AATT 6 cut(s) 173, 270, 355, 996, 1034, 1306
SseBI AGGCCT 1 cut(s) 551
SsiI CCGC 1 cut(s) 1416
SspMI CTAG 7 cut(s) 74, 198, 896, 932, 1233, 1439, 1491
SstI GAGCTC 1 cut(s) 714
StuI AGGCCT 1 cut(s) 551
StyD4I CCNGG 5 cut(s) 178, 179, 607, 805, 1450
TaaI ACNGT 5 cut(s) 135, 170, 344, 919, 1399
TaiI ACGT 2 cut(s) 771, 1022
TaqI TCGA 3 cut(s) 274, 1341, 1377
TasI AATT 6 cut(s) 173, 270, 355, 996, 1034, 1306
TatI WGTACW 1 cut(s) 351
Tru1I TTAA 3 cut(s) 1211, 1227, 1305
Tru9I TTAA 3 cut(s) 1211, 1227, 1305
TscAI CASTG 2 cut(s) 705, 922
TseFI GTSAC 1 cut(s) 886
TseI GCWGC 2 cut(s) 118, 695
Tsp45I GTSAC 1 cut(s) 886
TspDTI ATGAA 6 cut(s) 396, 856, 944, 986, 1280, 1286
TspGWI ACGGA 2 cut(s) 1040, 1542
TspMI CCCGGG 1 cut(s) 179
TspRI CASTG 2 cut(s) 705, 922
Van91I CCANNNNNTGG 1 cut(s) 261
VpaK11BI GGWCC 2 cut(s) 302, 1354
XapI RAATTY 2 cut(s) 270, 1034
XbaI TCTAGA 1 cut(s) 931
XceI RCATGY 2 cut(s) 398, 679
XmaI CCCGGG 1 cut(s) 179
XspI CTAG 7 cut(s) 74, 198, 896, 932, 1233, 1439, 1491
Zsp2I ATGCAT 1 cut(s) 1470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.