Lignin degradation and detoxification of lignin-derived products
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 996, 1331 |
| AccB1I | GGYRCC | 3 cut(s) | 996, 1038, 1331 |
| AccBSI | CCGCTC | 1 cut(s) | 1300 |
| AccI | GTMKAC | 1 cut(s) | 1959 |
| AciI | CCGC | 6 cut(s) | 1300, 1473, 1769, 2018, 2180, 2189 |
| AclI | AACGTT | 2 cut(s) | 1005, 2345 |
| AclWI | GGATC | 3 cut(s) | 553, 1563, 1676 |
| AcoI | YGGCCR | 4 cut(s) | 959, 971, 1763, 1775 |
| AcsI | RAATTY | 2 cut(s) | 610, 1138 |
| AcuI | CTGAAG | 2 cut(s) | 966, 1521 |
| AcyI | GRCGYC | 1 cut(s) | 2353 |
| AdeI | CACNNNGTG | 1 cut(s) | 257 |
| AfaI | GTAC | 9 cut(s) | 310, 877, 998, 1333, 1349, 1704, 1731, 2078, 2104 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1048, 1088, 2179 |
| AflII | CTTAAG | 1 cut(s) | 2156 |
| AgsI | TTSAA | 9 cut(s) | 272, 281, 342, 768, 1136, 1286, 1409, 1810, 2254 |
| AjnI | CCWGG | 4 cut(s) | 1081, 1450, 1694, 1941 |
| AleI | CACNNNNGTG | 1 cut(s) | 1771 |
| Alw21I | GWGCWC | 4 cut(s) | 428, 1114, 1384, 1648 |
| Alw26I | GTCTC | 4 cut(s) | 935, 1761, 1818, 2363 |
| Alw44I | GTGCAC | 1 cut(s) | 1380 |
| AlwI | GGATC | 3 cut(s) | 553, 1563, 1676 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 218, 542, 824 |
| Ama87I | CYCGRG | 1 cut(s) | 21 |
| AoxI | GGCC | 6 cut(s) | 821, 959, 971, 1763, 1775, 2210 |
| ApaLI | GTGCAC | 1 cut(s) | 1380 |
| ApeKI | GCWGC | 5 cut(s) | 1595, 1598, 1691, 1973, 1976 |
| ApoI | RAATTY | 2 cut(s) | 610, 1138 |
| AseI | ATTAAT | 1 cut(s) | 2066 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 276 |
| Asp718I | GGTACC | 2 cut(s) | 996, 1331 |
| AspA2I | CCTAGG | 1 cut(s) | 2111 |
| AspLEI | GCGC | 2 cut(s) | 1294, 1843 |
| AspS9I | GGNCC | 2 cut(s) | 821, 1470 |
| AsuHPI | GGTGA | 6 cut(s) | 398, 614, 731, 1076, 1576, 2194 |
| AvaI | CYCGRG | 1 cut(s) | 21 |
| AvaII | GGWCC | 1 cut(s) | 1470 |
| AvrII | CCTAGG | 1 cut(s) | 2111 |
| AxyI | CCTNAGG | 2 cut(s) | 912, 1734 |
| BaeGI | GKGCMC | 2 cut(s) | 1041, 1384 |
| BalI | TGGCCA | 3 cut(s) | 973, 1765, 1777 |
| BanI | GGYRCC | 3 cut(s) | 996, 1038, 1331 |
| BanII | GRGCYC | 1 cut(s) | 428 |
| BauI | CACGAG | 1 cut(s) | 2031 |
| BbsI | GAAGAC | 2 cut(s) | 198, 756 |
| Bbv12I | GWGCWC | 4 cut(s) | 428, 1114, 1384, 1648 |
| BbvI | GCAGC | 5 cut(s) | 1582, 1585, 1678, 1960, 1988 |
| BccI | CCATC | 5 cut(s) | 473, 515, 1624, 1786, 1903 |
| BceAI | ACGGC | 2 cut(s) | 974, 1158 |
| BciT130I | CCWGG | 4 cut(s) | 1083, 1452, 1696, 1943 |
| BciVI | GTATCC | 2 cut(s) | 1316, 2196 |
| BclI | TGATCA | 1 cut(s) | 499 |
| BcoDI | GTCTC | 4 cut(s) | 935, 1761, 1818, 2363 |
| BfaI | CTAG | 6 cut(s) | 68, 510, 663, 1295, 2112, 2174 |
| BfmI | CTRYAG | 4 cut(s) | 816, 1387, 1974, 2282 |
| BfrI | CTTAAG | 1 cut(s) | 2156 |
| BfuI | GTATCC | 2 cut(s) | 1316, 2196 |
| BisI | GCNGC | 5 cut(s) | 1596, 1599, 1692, 1974, 1977 |
| BlnI | CCTAGG | 1 cut(s) | 2111 |
| BlsI | GCNGC | 5 cut(s) | 1597, 1600, 1693, 1975, 1978 |
| Bme1390I | CCNGG | 4 cut(s) | 1083, 1452, 1696, 1943 |
| Bme18I | GGWCC | 1 cut(s) | 1470 |
| BmeT110I | CYCGRG | 1 cut(s) | 21 |
| BmgT120I | GGNCC | 2 cut(s) | 821, 1470 |
| BmiI | GGNNCC | 4 cut(s) | 456, 998, 1040, 1333 |
| BmrFI | CCNGG | 4 cut(s) | 1083, 1452, 1696, 1943 |
| BmrI | ACTGGG | 1 cut(s) | 1914 |
| BmsI | GCATC | 5 cut(s) | 475, 1521, 1729, 2156, 2230 |
| BmuI | ACTGGG | 1 cut(s) | 1914 |
| BpiI | GAAGAC | 2 cut(s) | 198, 756 |
| BpmI | CTGGAG | 1 cut(s) | 537 |
| Bsa29I | ATCGAT | 1 cut(s) | 1917 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1913 |
| BsaHI | GRCGYC | 1 cut(s) | 2353 |
| BsaI | GGTCTC | 1 cut(s) | 1761 |
| BsaJI | CCNNGG | 4 cut(s) | 1081, 1260, 1397, 2111 |
| BsaWI | WCCGGW | 1 cut(s) | 1480 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1048, 1088, 2179 |
| Bse1I | ACTGG | 5 cut(s) | 63, 726, 1066, 1808, 1909 |
| Bse21I | CCTNAGG | 2 cut(s) | 912, 1734 |
| Bse3DI | GCAATG | 1 cut(s) | 2385 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1913 |
| BseBI | CCWGG | 4 cut(s) | 1083, 1452, 1696, 1943 |
| BseCI | ATCGAT | 1 cut(s) | 1917 |
| BseDI | CCNNGG | 4 cut(s) | 1081, 1260, 1397, 2111 |
| BseGI | GGATG | 9 cut(s) | 111, 238, 490, 831, 1192, 1270, 1744, 1914, 2242 |
| BseJI | GATNNNNATC | 1 cut(s) | 1913 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1048, 1088, 2179 |
| BseMI | GCAATG | 1 cut(s) | 2385 |
| BseNI | ACTGG | 5 cut(s) | 63, 726, 1066, 1808, 1909 |
| BseRI | GAGGAG | 4 cut(s) | 170, 371, 692, 1650 |
| BseSI | GKGCMC | 2 cut(s) | 1041, 1384 |
| BseXI | GCAGC | 5 cut(s) | 1582, 1585, 1678, 1960, 1988 |
| BseYI | CCCAGC | 1 cut(s) | 1551 |
| BshFI | GGCC | 6 cut(s) | 823, 961, 973, 1765, 1777, 2212 |
| BshNI | GGYRCC | 3 cut(s) | 996, 1038, 1331 |
| BshVI | ATCGAT | 1 cut(s) | 1917 |
| BsiHKAI | GWGCWC | 4 cut(s) | 428, 1114, 1384, 1648 |
| BsiHKCI | CYCGRG | 1 cut(s) | 21 |
| BsiSI | CCGG | 1 cut(s) | 1481 |
| BslFI | GGGAC | 1 cut(s) | 1379 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1048, 1088, 2179 |
| BsmAI | GTCTC | 4 cut(s) | 935, 1761, 1818, 2363 |
| BsmFI | GGGAC | 1 cut(s) | 1379 |
| BsmI | GAATGC | 1 cut(s) | 2334 |
| BsnI | GGCC | 6 cut(s) | 823, 961, 973, 1765, 1777, 2212 |
| Bso31I | GGTCTC | 1 cut(s) | 1761 |
| BsoBI | CYCGRG | 1 cut(s) | 21 |
| Bsp1286I | GDGCHC | 5 cut(s) | 428, 1041, 1114, 1384, 1648 |
| Bsp143I | GATC | 8 cut(s) | 499, 545, 1366, 1555, 1681, 1747, 2137, 2259 |
| BspACI | CCGC | 6 cut(s) | 1300, 1473, 1769, 2018, 2180, 2189 |
| BspANI | GGCC | 6 cut(s) | 823, 961, 973, 1765, 1777, 2212 |
| BspDI | ATCGAT | 1 cut(s) | 1917 |
| BspLI | GGNNCC | 4 cut(s) | 456, 998, 1040, 1333 |
| BspMAI | CTGCAG | 3 cut(s) | 820, 1978, 2286 |
| BspPI | GGATC | 3 cut(s) | 553, 1563, 1676 |
| BspQI | GCTCTTC | 1 cut(s) | 1119 |
| BspT107I | GGYRCC | 3 cut(s) | 996, 1038, 1331 |
| BspTI | CTTAAG | 1 cut(s) | 2156 |
| BspTNI | GGTCTC | 1 cut(s) | 1761 |
| BsrBI | CCGCTC | 1 cut(s) | 1300 |
| BsrDI | GCAATG | 1 cut(s) | 2385 |
| BsrI | ACTGG | 5 cut(s) | 63, 726, 1066, 1808, 1909 |
| BssECI | CCNNGG | 4 cut(s) | 1081, 1260, 1397, 2111 |
| BssMI | GATC | 8 cut(s) | 499, 545, 1366, 1555, 1681, 1747, 2137, 2259 |
| BssNAI | GTATAC | 1 cut(s) | 1960 |
| BssNI | GRCGYC | 1 cut(s) | 2353 |
| BssSI | CACGAG | 1 cut(s) | 2031 |
| BssT1I | CCWWGG | 3 cut(s) | 1260, 1397, 2111 |
| Bst1107I | GTATAC | 1 cut(s) | 1960 |
| Bst2BI | CACGAG | 1 cut(s) | 2031 |
| Bst2UI | CCWGG | 4 cut(s) | 1083, 1452, 1696, 1943 |
| Bst4CI | ACNGT | 6 cut(s) | 197, 220, 239, 743, 1347, 1379 |
| Bst6I | CTCTTC | 3 cut(s) | 444, 1119, 1149 |
| BstACI | GRCGYC | 1 cut(s) | 2353 |
| BstAFI | CTTAAG | 1 cut(s) | 2156 |
| BstC8I | GCNNGC | 4 cut(s) | 1023, 1207, 1384, 1717 |
| BstF5I | GGATG | 9 cut(s) | 111, 238, 490, 831, 1192, 1270, 1744, 1914, 2242 |
| BstHHI | GCGC | 2 cut(s) | 1294, 1843 |
| BstKTI | GATC | 8 cut(s) | 502, 548, 1369, 1558, 1684, 1750, 2140, 2262 |
| BstMAI | GTCTC | 4 cut(s) | 935, 1761, 1818, 2363 |
| BstMBI | GATC | 8 cut(s) | 499, 545, 1366, 1555, 1681, 1747, 2137, 2259 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1319, 1429, 2186 |
| BstNI | CCWGG | 4 cut(s) | 1083, 1452, 1696, 1943 |
| BstNSI | RCATGY | 2 cut(s) | 1406, 1719 |
| BstSCI | CCNGG | 4 cut(s) | 1081, 1450, 1694, 1941 |
| BstSFI | CTRYAG | 4 cut(s) | 816, 1387, 1974, 2282 |
| BstSLI | GKGCMC | 2 cut(s) | 1041, 1384 |
| BstV1I | GCAGC | 5 cut(s) | 1582, 1585, 1678, 1960, 1988 |
| BstV2I | GAAGAC | 2 cut(s) | 198, 756 |
| BstX2I | RGATCY | 1 cut(s) | 1555 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 969, 1773, 1803 |
| BstYI | RGATCY | 1 cut(s) | 1555 |
| BstZ17I | GTATAC | 1 cut(s) | 1960 |
| Bsu15I | ATCGAT | 1 cut(s) | 1917 |
| Bsu36I | CCTNAGG | 2 cut(s) | 912, 1734 |
| BsuI | GTATCC | 2 cut(s) | 1316, 2196 |
| BsuRI | GGCC | 6 cut(s) | 823, 961, 973, 1765, 1777, 2212 |
| BsuTUI | ATCGAT | 1 cut(s) | 1917 |
| BtgZI | GCGATG | 1 cut(s) | 1538 |
| BtsCI | GGATG | 9 cut(s) | 111, 238, 490, 831, 1192, 1270, 1744, 1914, 2242 |
| BtsI | GCAGTG | 6 cut(s) | 250, 813, 904, 1675, 1778, 2291 |
| Cac8I | GCNNGC | 4 cut(s) | 1023, 1207, 1384, 1717 |
| CaiI | CAGNNNCTG | 3 cut(s) | 218, 542, 824 |
| CfoI | GCGC | 2 cut(s) | 1294, 1843 |
| Cfr13I | GGNCC | 2 cut(s) | 821, 1470 |
| ClaI | ATCGAT | 1 cut(s) | 1917 |
| CseI | GACGC | 2 cut(s) | 1731, 2342 |
| CsiI | ACCWGGT | 1 cut(s) | 1450 |
| Csp6I | GTAC | 9 cut(s) | 309, 876, 997, 1332, 1348, 1703, 1730, 2077, 2103 |
| CviQI | GTAC | 9 cut(s) | 309, 876, 997, 1332, 1348, 1703, 1730, 2077, 2103 |
| DpnI | GATC | 8 cut(s) | 501, 547, 1368, 1557, 1683, 1749, 2139, 2261 |
| DpnII | GATC | 8 cut(s) | 499, 545, 1366, 1555, 1681, 1747, 2137, 2259 |
| DraIII | CACNNNGTG | 1 cut(s) | 257 |
| EaeI | YGGCCR | 4 cut(s) | 959, 971, 1763, 1775 |
| Eam1104I | CTCTTC | 3 cut(s) | 444, 1119, 1149 |
| EarI | CTCTTC | 3 cut(s) | 444, 1119, 1149 |
| EciI | GGCGGA | 1 cut(s) | 2007 |
| Ecl136II | GAGCTC | 1 cut(s) | 426 |
| Eco130I | CCWWGG | 3 cut(s) | 1260, 1397, 2111 |
| Eco24I | GRGCYC | 1 cut(s) | 428 |
| Eco31I | GGTCTC | 1 cut(s) | 1761 |
| Eco32I | GATATC | 1 cut(s) | 2293 |
| Eco47I | GGWCC | 1 cut(s) | 1470 |
| Eco53kI | GAGCTC | 1 cut(s) | 426 |
| Eco57I | CTGAAG | 2 cut(s) | 966, 1521 |
| Eco81I | CCTNAGG | 2 cut(s) | 912, 1734 |
| Eco88I | CYCGRG | 1 cut(s) | 21 |
| EcoICRI | GAGCTC | 1 cut(s) | 426 |
| EcoO109I | RGGNCCY | 1 cut(s) | 821 |
| EcoRI | GAATTC | 1 cut(s) | 610 |
| EcoRII | CCWGG | 4 cut(s) | 1081, 1450, 1694, 1941 |
| EcoRV | GATATC | 1 cut(s) | 2293 |
| EcoT14I | CCWWGG | 3 cut(s) | 1260, 1397, 2111 |
| EcoT22I | ATGCAT | 1 cut(s) | 1721 |
| EcoT38I | GRGCYC | 1 cut(s) | 428 |
| ErhI | CCWWGG | 3 cut(s) | 1260, 1397, 2111 |
| FaqI | GGGAC | 1 cut(s) | 1379 |
| FauI | CCCGC | 1 cut(s) | 1293 |
| FbaI | TGATCA | 1 cut(s) | 499 |
| FblI | GTMKAC | 1 cut(s) | 1959 |
| Fnu4HI | GCNGC | 5 cut(s) | 1596, 1599, 1692, 1974, 1977 |
| FokI | GGATG | 9 cut(s) | 118, 245, 497, 818, 1199, 1277, 1751, 1921, 2249 |
| FriOI | GRGCYC | 1 cut(s) | 428 |
| Fsp4HI | GCNGC | 5 cut(s) | 1596, 1599, 1692, 1974, 1977 |
| FspBI | CTAG | 6 cut(s) | 68, 510, 663, 1295, 2112, 2174 |
| GlaI | GCGC | 2 cut(s) | 1293, 1842 |
| GluI | GCNGC | 5 cut(s) | 1596, 1599, 1692, 1974, 1977 |
| GsaI | CCCAGC | 1 cut(s) | 1555 |
| GsuI | CTGGAG | 1 cut(s) | 537 |
| HaeIII | GGCC | 6 cut(s) | 823, 961, 973, 1765, 1777, 2212 |
| HapII | CCGG | 1 cut(s) | 1481 |
| HgaI | GACGC | 2 cut(s) | 1731, 2342 |
| HhaI | GCGC | 2 cut(s) | 1294, 1843 |
| Hin1I | GRCGYC | 1 cut(s) | 2353 |
| Hin6I | GCGC | 2 cut(s) | 1292, 1841 |
| HinP1I | GCGC | 2 cut(s) | 1292, 1841 |
| HincII | GTYRAC | 1 cut(s) | 28 |
| HindII | GTYRAC | 1 cut(s) | 28 |
| HindIII | AAGCTT | 4 cut(s) | 866, 918, 1019, 1493 |
| HpaII | CCGG | 1 cut(s) | 1481 |
| HphI | GGTGA | 6 cut(s) | 398, 614, 731, 1076, 1576, 2194 |
| Hpy166II | GTNNAC | 6 cut(s) | 28, 1382, 1418, 1486, 1960, 2197 |
| Hpy8I | GTNNAC | 6 cut(s) | 28, 1382, 1418, 1486, 1960, 2197 |
| HpyAV | CCTTC | 7 cut(s) | 412, 676, 710, 742, 941, 1403, 2210 |
| HpyCH4III | ACNGT | 6 cut(s) | 197, 220, 239, 743, 1347, 1379 |
| HpyCH4IV | ACGT | 2 cut(s) | 1005, 2345 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1319, 1429, 2186 |
| HpySE526I | ACGT | 2 cut(s) | 1005, 2345 |
| Hsp92I | GRCGYC | 1 cut(s) | 2353 |
| HspAI | GCGC | 2 cut(s) | 1292, 1841 |
| KpnI | GGTACC | 2 cut(s) | 1000, 1335 |
| Ksp22I | TGATCA | 1 cut(s) | 499 |
| Kzo9I | GATC | 8 cut(s) | 499, 545, 1366, 1555, 1681, 1747, 2137, 2259 |
| LguI | GCTCTTC | 1 cut(s) | 1119 |
| LmnI | GCTCC | 2 cut(s) | 1261, 1429 |
| Lsp1109I | GCAGC | 5 cut(s) | 1582, 1585, 1678, 1960, 1988 |
| LweI | GCATC | 5 cut(s) | 475, 1521, 1729, 2156, 2230 |
| MabI | ACCWGGT | 1 cut(s) | 1450 |
| MaeI | CTAG | 6 cut(s) | 68, 510, 663, 1295, 2112, 2174 |
| MaeII | ACGT | 2 cut(s) | 1005, 2345 |
| MaeIII | GTNAC | 6 cut(s) | 39, 220, 386, 811, 1057, 2033 |
| MalI | GATC | 8 cut(s) | 501, 547, 1368, 1557, 1683, 1749, 2139, 2261 |
| MbiI | CCGCTC | 1 cut(s) | 1300 |
| MboI | GATC | 8 cut(s) | 499, 545, 1366, 1555, 1681, 1747, 2137, 2259 |
| MfeI | CAATTG | 1 cut(s) | 847 |
| MflI | RGATCY | 1 cut(s) | 1555 |
| MhlI | GDGCHC | 5 cut(s) | 428, 1041, 1114, 1384, 1648 |
| MlsI | TGGCCA | 3 cut(s) | 973, 1765, 1777 |
| MluNI | TGGCCA | 3 cut(s) | 973, 1765, 1777 |
| MlyI | GAGTC | 3 cut(s) | 308, 377, 1401 |
| MmeI | TCCRAC | 1 cut(s) | 1767 |
| Mox20I | TGGCCA | 3 cut(s) | 973, 1765, 1777 |
| Mph1103I | ATGCAT | 1 cut(s) | 1721 |
| MroXI | GAANNNNTTC | 1 cut(s) | 276 |
| MscI | TGGCCA | 3 cut(s) | 973, 1765, 1777 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1771 |
| Msp20I | TGGCCA | 3 cut(s) | 973, 1765, 1777 |
| MspA1I | CMGCKG | 1 cut(s) | 1322 |
| MspCI | CTTAAG | 1 cut(s) | 2156 |
| MspI | CCGG | 1 cut(s) | 1481 |
| MspR9I | CCNGG | 4 cut(s) | 1083, 1452, 1696, 1943 |
| MunI | CAATTG | 1 cut(s) | 847 |
| Mva1269I | GAATGC | 1 cut(s) | 2334 |
| MvaI | CCWGG | 4 cut(s) | 1083, 1452, 1696, 1943 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1319, 1429, 2186 |
| NdeII | GATC | 8 cut(s) | 499, 545, 1366, 1555, 1681, 1747, 2137, 2259 |
| NlaIV | GGNNCC | 4 cut(s) | 456, 998, 1040, 1333 |
| NmuCI | GTSAC | 4 cut(s) | 39, 386, 811, 2033 |
| NsiI | ATGCAT | 1 cut(s) | 1721 |
| NspI | RCATGY | 2 cut(s) | 1406, 1719 |
| OliI | CACNNNNGTG | 1 cut(s) | 1771 |
| PaeI | GCATGC | 1 cut(s) | 1719 |
| PciSI | GCTCTTC | 1 cut(s) | 1119 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1444 |
| PctI | GAATGC | 1 cut(s) | 2334 |
| PdmI | GAANNNNTTC | 1 cut(s) | 276 |
| PfeI | GAWTC | 8 cut(s) | 130, 160, 248, 626, 1673, 1914, 2027, 2093 |
| PfoI | TCCNGGA | 1 cut(s) | 1941 |
| PkrI | GCNGC | 5 cut(s) | 1597, 1600, 1693, 1975, 1978 |
| PleI | GAGTC | 3 cut(s) | 307, 376, 1400 |
| PpsI | GAGTC | 3 cut(s) | 307, 376, 1400 |
| PshBI | ATTAAT | 1 cut(s) | 2066 |
| Psp124BI | GAGCTC | 1 cut(s) | 428 |
| Psp1406I | AACGTT | 2 cut(s) | 1005, 2345 |
| Psp6I | CCWGG | 4 cut(s) | 1081, 1450, 1694, 1941 |
| PspFI | CCCAGC | 1 cut(s) | 1551 |
| PspGI | CCWGG | 4 cut(s) | 1081, 1450, 1694, 1941 |
| PspN4I | GGNNCC | 4 cut(s) | 456, 998, 1040, 1333 |
| PspPI | GGNCC | 2 cut(s) | 821, 1470 |
| PstI | CTGCAG | 3 cut(s) | 820, 1978, 2286 |
| PstNI | CAGNNNCTG | 3 cut(s) | 218, 542, 824 |
| PsuI | RGATCY | 1 cut(s) | 1555 |
| PvuII | CAGCTG | 1 cut(s) | 1322 |
| RsaI | GTAC | 9 cut(s) | 310, 877, 998, 1333, 1349, 1704, 1731, 2078, 2104 |
| RsaNI | GTAC | 9 cut(s) | 309, 876, 997, 1332, 1348, 1703, 1730, 2077, 2103 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1771 |
| SacI | GAGCTC | 1 cut(s) | 428 |
| SapI | GCTCTTC | 1 cut(s) | 1119 |
| SatI | GCNGC | 5 cut(s) | 1596, 1599, 1692, 1974, 1977 |
| Sau3AI | GATC | 8 cut(s) | 499, 545, 1366, 1555, 1681, 1747, 2137, 2259 |
| Sau96I | GGNCC | 2 cut(s) | 821, 1470 |
| SchI | GAGTC | 3 cut(s) | 308, 377, 1401 |
| ScrFI | CCNGG | 4 cut(s) | 1083, 1452, 1696, 1943 |
| SduI | GDGCHC | 5 cut(s) | 428, 1041, 1114, 1384, 1648 |
| SexAI | ACCWGGT | 1 cut(s) | 1450 |
| SfaNI | GCATC | 5 cut(s) | 475, 1521, 1729, 2156, 2230 |
| SfcI | CTRYAG | 4 cut(s) | 816, 1387, 1974, 2282 |
| SinI | GGWCC | 1 cut(s) | 1470 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1771 |
| SmlI | CTYRAG | 1 cut(s) | 2156 |
| SmoI | CTYRAG | 1 cut(s) | 2156 |
| SphI | GCATGC | 1 cut(s) | 1719 |
| SsiI | CCGC | 6 cut(s) | 1300, 1473, 1769, 2018, 2180, 2189 |
| SspI | AATATT | 2 cut(s) | 268, 277 |
| SspMI | CTAG | 6 cut(s) | 68, 510, 663, 1295, 2112, 2174 |
| SstI | GAGCTC | 1 cut(s) | 428 |
| StyD4I | CCNGG | 4 cut(s) | 1081, 1450, 1694, 1941 |
| StyI | CCWWGG | 3 cut(s) | 1260, 1397, 2111 |
| TaaI | ACNGT | 6 cut(s) | 197, 220, 239, 743, 1347, 1379 |
| TaiI | ACGT | 2 cut(s) | 1008, 2348 |
| TaqI | TCGA | 3 cut(s) | 895, 1917, 2262 |
| TaqII | GACCGA | 1 cut(s) | 182 |
| TatI | WGTACW | 3 cut(s) | 308, 875, 2102 |
| TfiI | GAWTC | 8 cut(s) | 130, 160, 248, 626, 1673, 1914, 2027, 2093 |
| TseFI | GTSAC | 4 cut(s) | 39, 386, 811, 2033 |
| TseI | GCWGC | 5 cut(s) | 1595, 1598, 1691, 1973, 1976 |
| Tsp45I | GTSAC | 4 cut(s) | 39, 386, 811, 2033 |
| TspGWI | ACGGA | 2 cut(s) | 45, 1977 |
| Vha464I | CTTAAG | 1 cut(s) | 2156 |
| VneI | GTGCAC | 1 cut(s) | 1380 |
| VpaK11BI | GGWCC | 1 cut(s) | 1470 |
| VspI | ATTAAT | 1 cut(s) | 2066 |
| XapI | RAATTY | 2 cut(s) | 610, 1138 |
| XceI | RCATGY | 2 cut(s) | 1406, 1719 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 733, 1692 |
| XmaJI | CCTAGG | 1 cut(s) | 2111 |
| XmiI | GTMKAC | 1 cut(s) | 1959 |
| XmnI | GAANNNNTTC | 1 cut(s) | 276 |
| XspI | CTAG | 6 cut(s) | 68, 510, 663, 1295, 2112, 2174 |
| Zsp2I | ATGCAT | 1 cut(s) | 1721 |