RchiOBHm_Chr7g0241491

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
67577968 .. 67578816
849 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21639

Sequence Viewer

Length: 792 bp
ATGGTCCCAACACATTTCTCCGAGGTCGGGTTCCTGATCCTCCAAAAGCAGCAGCAATCAGCTACTAAAATACCCATCATGAATTGCCCACAGGATTGGCCCAAGCCTATTGTCCGAGTACAGTCCCTGTCAGAAAAAGGCGTTGTACCCGATCGGTACATCAAACCACCGACGGAAAGACCAAGCTCCGATCACCCCACCCACGCCAACATCCCCATCATCGACTTCCAACCCTTGCTATCATCCGATAACGGCGACGATGAACTCCGAGCAAAACTTGGTCGGGTTCCTGATCCTCCAAACGTAGAAATGGCTCAGCCAGCGGACGTAGAAATGGGTCAACCACAGACAGCAGCAGAGCCCAACCAACCCAACCACCGCGTGCTGGATTATTGGGCAAAGATACTTGCTCTGTTCTGCTCGGCATCCGGCATCGAAATGGCTCTCCTCTCCGTCAAGTCCGGCTCGGAGCTCCCTGCAAGCTTTTACTTCCTCGGATTCACCCTCATCCTTGGCTTCACTTGCTTCTTTGTGGGCAGATGTATTCGCTCCATCTTCGAACAAGCGGCTAAGGTGCTCCAGCGAGTCGGCATTTTCTTTGGGGTCACTGCAATCTTCATATCCATCACTATTCCATTTCCCACTCTCTGGTTCAAATGTGTCACCGGCTTTATCTATGCGCTCTGCTGGCTTACAATATTGGCTTGCAATTACTTCCATTCTCACCTGCTACCAGTGTATAACAAAGTGATCACCAGTATGAGCTCGGGGCTTCTGGGTTCTACTACTTGA

Protein Analysis

263

Amino Acids

29.19

Weight (kDa)

6.99

Isoelectric Point (pI)

47.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000512)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g13130 FvH4_5g13140 FvH4_5g13141 FvH4_5g13170 FvH4_5g13220 FvH4_5g13221 FvH4_5g13222 FvH4_5g13223 FvH4_5g13230
malus_domestica MD03G1009100.v1.1 MD03G1009500.v1.1 MD03G1009600.v1.1 MD03G1010100.v1.1 MD03G1011400.v1.1 MD11G1013400.v1.1 MD11G1013900.v1.1 MD12G1151700.v1.1 MD12G1151900.v1.1 MD14G1141800.v1.1
prunus_persica Prupe.1G109400_v2.0.a1 Prupe.3G028900_v2.0.a1 Prupe.6G011200_v2.0.a1 Prupe.6G011700_v2.0.a1 Prupe.6G011800_v2.0.a1
pyrus_communis pycom03g01000 pycom07g22580 pycom11g00910 pycom11g00930
rosa_chinensis RchiOBHm_Chr7g0240781 RchiOBHm_Chr7g0241491
rosa_laevigata RLG00000000572 RLG00000005009 RLG00000014262 RLG00000021010 RLG00000021011 RLG00000026751
rosa_multiflora Rmu_sc0000215.1_g000008 Rmu_sc0001275.1_g000010 Rmu_sc0002761.1_g000010 Rmu_sc0003825.1_g000034 Rmu_sc0004712.1_g000019 Rmu_sc0004712.1_g000020 Rmu_sc0004712.1_g000025 Rmu_sc0004712.1_g000028 Rmu_sc0004712.1_g000030 Rmu_sc0004821.1_g000003 Rmu_sc0005888.1_g000011 Rmu_sc0007533.1_g000008 Rmu_sc0007533.1_g000010 Rmu_sc0008698.1_g000006 Rmu_sc0010322.1_g000017 Rmu_sc0010483.1_g000002 Rmu_sc0013122.1_g000003
rosa_roxburghii Rroxscaffold_176G00431730 Rroxscaffold_3G00219000 Rroxscaffold_3G00269990 Rroxscaffold_3G00270040 Rroxscaffold_3G00270050 Rroxscaffold_3G00270060 Rroxscaffold_4G00283100 Rroxscaffold_6G00430000
rosa_rugosa Rorug01G0382000 Rorug02G0463100 Rorug02G0644300 Rorug06G0011800 Rorug06G0461600 Rorug07G0344600 Rorug07G0344700
rosa_samantha Rh2AG527500 Rh2AG527800 Rh2CG512000 Rh2CG512200 Rh2DG550800 Rh2DG551000 Rh3CG048300 Rh3DG049200 Rh7AG062500 Rh7AG062700 Rh7AG062800 Rh7BG062900 Rh7BG063000 Rh7BG063100 Rh7BG469800 Rh7DG062500 Rh7DG062800 Rh7DG063400 Rh7DG063500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 735
Acc36I ACCTGC 1 cut(s) 735
AccB7I CCANNNNNTGG 1 cut(s) 648
AccII CGCG 1 cut(s) 381
AciI CCGC 3 cut(s) 323, 379, 566
AclWI GGATC 2 cut(s) 31, 287
AdeI CACNNNGTG 1 cut(s) 382
AfaI GTAC 3 cut(s) 120, 147, 158
AfiI CCNNNNNNNGG 3 cut(s) 27, 385, 648
AgsI TTSAA 1 cut(s) 655
AluBI AGCT 5 cut(s) 62, 186, 472, 483, 765
AluI AGCT 5 cut(s) 62, 186, 472, 483, 765
Alw21I GWGCWC 3 cut(s) 474, 579, 767
AlwI GGATC 2 cut(s) 31, 287
AlwNI CAGNNNCTG 1 cut(s) 127
Ama87I CYCGRG 1 cut(s) 766
AoxI GGCC 1 cut(s) 98
ApeKI GCWGC 3 cut(s) 49, 52, 353
AspLEI GCGC 1 cut(s) 682
AspS9I GGNCC 2 cut(s) 4, 99
AsuHPI GGTGA 5 cut(s) 185, 493, 655, 716, 745
AsuII TTCGAA 1 cut(s) 558
AvaI CYCGRG 1 cut(s) 766
AvaII GGWCC 1 cut(s) 4
BanII GRGCYC 3 cut(s) 363, 474, 767
Bbv12I GWGCWC 3 cut(s) 474, 579, 767
BbvI GCAGC 3 cut(s) 61, 64, 365
BccI CCATC 4 cut(s) 83, 224, 560, 632
BceAI ACGGC 1 cut(s) 268
BclI TGATCA 1 cut(s) 750
BfuAI ACCTGC 1 cut(s) 735
BisI GCNGC 4 cut(s) 50, 53, 354, 567
BlpI GCTNAGC 1 cut(s) 315
BlsI GCNGC 4 cut(s) 51, 54, 355, 568
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 766
BmgT120I GGNCC 2 cut(s) 4, 99
BmiI GGNNCC 3 cut(s) 6, 32, 288
BmsI GCATC 2 cut(s) 434, 441
BpmI CTGGAG 1 cut(s) 563
Bpu10I CCTNAGC 1 cut(s) 570
Bpu1102I GCTNAGC 1 cut(s) 315
Bpu14I TTCGAA 1 cut(s) 558
BsaJI CCNNGG 3 cut(s) 21, 493, 511
Bsc4I CCNNNNNNNGG 3 cut(s) 27, 385, 648
Bse118I RCCGGY 1 cut(s) 665
Bse1I ACTGG 2 cut(s) 734, 756
BseDI CCNNGG 3 cut(s) 21, 493, 511
BseGI GGATG 4 cut(s) 210, 242, 425, 507
BseLI CCNNNNNNNGG 3 cut(s) 27, 385, 648
BseMII CTCAG 1 cut(s) 329
BseNI ACTGG 2 cut(s) 734, 756
BseRI GAGGAG 1 cut(s) 437
BseXI GCAGC 3 cut(s) 61, 64, 365
Bsh1236I CGCG 1 cut(s) 381
Bsh1285I CGRYCG 1 cut(s) 154
BshFI GGCC 1 cut(s) 100
BsiEI CGRYCG 1 cut(s) 154
BsiHKAI GWGCWC 3 cut(s) 474, 579, 767
BsiHKCI CYCGRG 1 cut(s) 766
BsiSI CCGG 3 cut(s) 429, 462, 666
BslFI GGGAC 1 cut(s) 109
BslI CCNNNNNNNGG 3 cut(s) 27, 385, 648
BsmFI GGGAC 1 cut(s) 109
BsnI GGCC 1 cut(s) 100
BsoBI CYCGRG 1 cut(s) 766
Bsp119I TTCGAA 1 cut(s) 558
Bsp1286I GDGCHC 4 cut(s) 363, 474, 579, 767
Bsp143I GATC 5 cut(s) 36, 151, 190, 292, 750
Bsp1720I GCTNAGC 1 cut(s) 315
BspACI CCGC 3 cut(s) 323, 379, 566
BspANI GGCC 1 cut(s) 100
BspCNI CTCAG 1 cut(s) 328
BspFNI CGCG 1 cut(s) 381
BspHI TCATGA 1 cut(s) 78
BspLI GGNNCC 3 cut(s) 6, 32, 288
BspMI ACCTGC 1 cut(s) 735
BspPI GGATC 2 cut(s) 31, 287
BspT104I TTCGAA 1 cut(s) 558
BsrFI RCCGGY 1 cut(s) 665
BsrI ACTGG 2 cut(s) 734, 756
BssAI RCCGGY 1 cut(s) 665
BssECI CCNNGG 3 cut(s) 21, 493, 511
BssMI GATC 5 cut(s) 36, 151, 190, 292, 750
BssT1I CCWWGG 1 cut(s) 511
Bst4CI ACNGT 1 cut(s) 123
BstBI TTCGAA 1 cut(s) 558
BstC8I GCNNGC 5 cut(s) 321, 383, 481, 689, 706
BstDEI CTNAG 2 cut(s) 315, 570
BstF5I GGATG 4 cut(s) 210, 242, 425, 507
BstFNI CGCG 1 cut(s) 381
BstHHI GCGC 1 cut(s) 682
BstKTI GATC 5 cut(s) 39, 154, 193, 295, 753
BstMBI GATC 5 cut(s) 36, 151, 190, 292, 750
BstMCI CGRYCG 1 cut(s) 154
BstMWI GCNNNNNNNGC 3 cut(s) 320, 522, 688
BstUI CGCG 1 cut(s) 381
BstV1I GCAGC 3 cut(s) 61, 64, 365
BstXI CCANNNNNNTGG 1 cut(s) 96
BsuRI GGCC 1 cut(s) 100
BtsCI GGATG 4 cut(s) 210, 242, 425, 507
BtsI GCAGTG 1 cut(s) 606
BtsIMutI CAGTG 2 cut(s) 606, 741
BveI ACCTGC 1 cut(s) 735
Cac8I GCNNGC 5 cut(s) 321, 383, 481, 689, 706
CaiI CAGNNNCTG 1 cut(s) 127
CciI TCATGA 1 cut(s) 78
CfoI GCGC 1 cut(s) 682
Cfr10I RCCGGY 1 cut(s) 665
Cfr13I GGNCC 2 cut(s) 4, 99
Csp6I GTAC 3 cut(s) 119, 146, 157
CviAII CATG 1 cut(s) 79
CviQI GTAC 3 cut(s) 119, 146, 157
DdeI CTNAG 2 cut(s) 315, 570
DpnI GATC 5 cut(s) 38, 153, 192, 294, 752
DpnII GATC 5 cut(s) 36, 151, 190, 292, 750
DraIII CACNNNGTG 1 cut(s) 382
Ecl136II GAGCTC 2 cut(s) 472, 765
Eco130I CCWWGG 1 cut(s) 511
Eco24I GRGCYC 3 cut(s) 363, 474, 767
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 2 cut(s) 472, 765
Eco88I CYCGRG 1 cut(s) 766
EcoICRI GAGCTC 2 cut(s) 472, 765
EcoT14I CCWWGG 1 cut(s) 511
EcoT38I GRGCYC 3 cut(s) 363, 474, 767
ErhI CCWWGG 1 cut(s) 511
FaeI CATG 1 cut(s) 82
FaiI YATR 5 cut(s) 80, 620, 678, 741, 761
FaqI GGGAC 1 cut(s) 109
FatI CATG 1 cut(s) 78
FbaI TGATCA 1 cut(s) 750
Fnu4HI GCNGC 4 cut(s) 50, 53, 354, 567
FokI GGATG 4 cut(s) 197, 229, 412, 494
FriOI GRGCYC 3 cut(s) 363, 474, 767
Fsp4HI GCNGC 4 cut(s) 50, 53, 354, 567
GlaI GCGC 1 cut(s) 681
GluI GCNGC 4 cut(s) 50, 53, 354, 567
GsuI CTGGAG 1 cut(s) 563
HaeIII GGCC 1 cut(s) 100
HapII CCGG 3 cut(s) 429, 462, 666
HhaI GCGC 1 cut(s) 682
Hin1II CATG 1 cut(s) 82
Hin6I GCGC 1 cut(s) 680
HinP1I GCGC 1 cut(s) 680
HincII GTYRAC 1 cut(s) 341
HindII GTYRAC 1 cut(s) 341
HindIII AAGCTT 1 cut(s) 481
HinfI GANTC 2 cut(s) 498, 585
HpaII CCGG 3 cut(s) 429, 462, 666
HphI GGTGA 5 cut(s) 185, 493, 655, 716, 745
Hpy166II GTNNAC 1 cut(s) 341
Hpy188I TCNGA 8 cut(s) 22, 116, 133, 190, 247, 269, 469, 497
Hpy188III TCNNGA 3 cut(s) 34, 79, 290
Hpy8I GTNNAC 1 cut(s) 341
Hpy99I CGWCG 2 cut(s) 175, 260
HpyCH4III ACNGT 1 cut(s) 123
HpyCH4IV ACGT 2 cut(s) 303, 327
HpyCH4V TGCA 3 cut(s) 479, 611, 708
HpyF10VI GCNNNNNNNGC 3 cut(s) 320, 522, 688
HpyF3I CTNAG 2 cut(s) 315, 570
HpySE526I ACGT 2 cut(s) 303, 327
Hsp92II CATG 1 cut(s) 82
HspAI GCGC 1 cut(s) 680
Ksp22I TGATCA 1 cut(s) 750
Kzo9I GATC 5 cut(s) 36, 151, 190, 292, 750
LmnI GCTCC 5 cut(s) 191, 469, 477, 554, 582
Lsp1109I GCAGC 3 cut(s) 61, 64, 365
LweI GCATC 2 cut(s) 434, 441
MaeII ACGT 2 cut(s) 303, 327
MaeIII GTNAC 2 cut(s) 604, 661
MalI GATC 5 cut(s) 38, 153, 192, 294, 752
MboI GATC 5 cut(s) 36, 151, 190, 292, 750
MboII GAAGA 2 cut(s) 547, 607
MhlI GDGCHC 4 cut(s) 363, 474, 579, 767
MluCI AATT 2 cut(s) 82, 709
MlyI GAGTC 1 cut(s) 594
MmeI TCCRAC 1 cut(s) 253
MnlI CCTC 6 cut(s) 16, 50, 306, 458, 503, 515
MslI CAYNNNNRTG 2 cut(s) 437, 758
MspA1I CMGCKG 1 cut(s) 323
MspI CCGG 3 cut(s) 429, 462, 666
MvnI CGCG 1 cut(s) 381
MwoI GCNNNNNNNGC 3 cut(s) 320, 522, 688
NdeII GATC 5 cut(s) 36, 151, 190, 292, 750
NlaIII CATG 1 cut(s) 82
NlaIV GGNNCC 3 cut(s) 6, 32, 288
NmeAIII GCCGAG 1 cut(s) 401
NmuCI GTSAC 2 cut(s) 604, 661
NspV TTCGAA 1 cut(s) 558
PagI TCATGA 1 cut(s) 78
PaqCI CACCTGC 1 cut(s) 735
PfeI GAWTC 1 cut(s) 498
PflMI CCANNNNNTGG 1 cut(s) 648
PkrI GCNGC 4 cut(s) 51, 54, 355, 568
Ple19I CGATCG 1 cut(s) 154
PleI GAGTC 1 cut(s) 593
PpsI GAGTC 1 cut(s) 593
Psp124BI GAGCTC 2 cut(s) 474, 767
PspN4I GGNNCC 3 cut(s) 6, 32, 288
PspPI GGNCC 2 cut(s) 4, 99
PstNI CAGNNNCTG 1 cut(s) 127
PvuI CGATCG 1 cut(s) 154
RsaI GTAC 3 cut(s) 120, 147, 158
RsaNI GTAC 3 cut(s) 119, 146, 157
RseI CAYNNNNRTG 2 cut(s) 437, 758
SacI GAGCTC 2 cut(s) 474, 767
SatI GCNGC 4 cut(s) 50, 53, 354, 567
Sau3AI GATC 5 cut(s) 36, 151, 190, 292, 750
Sau96I GGNCC 2 cut(s) 4, 99
SchI GAGTC 1 cut(s) 594
SduI GDGCHC 4 cut(s) 363, 474, 579, 767
SfaNI GCATC 2 cut(s) 434, 441
SfuI TTCGAA 1 cut(s) 558
SinI GGWCC 1 cut(s) 4
SmiMI CAYNNNNRTG 2 cut(s) 437, 758
Sse9I AATT 2 cut(s) 82, 709
SsiI CCGC 3 cut(s) 323, 379, 566
SspI AATATT 1 cut(s) 699
SstI GAGCTC 2 cut(s) 474, 767
StyI CCWWGG 1 cut(s) 511
TaaI ACNGT 1 cut(s) 123
TaiI ACGT 2 cut(s) 306, 330
TaqI TCGA 3 cut(s) 222, 435, 558
TasI AATT 2 cut(s) 82, 709
TatI WGTACW 1 cut(s) 118
TauI GCSGC 1 cut(s) 569
TfiI GAWTC 1 cut(s) 498
TscAI CASTG 2 cut(s) 613, 741
TseFI GTSAC 2 cut(s) 604, 661
TseI GCWGC 3 cut(s) 49, 52, 353
Tsp45I GTSAC 2 cut(s) 604, 661
TspDTI ATGAA 3 cut(s) 95, 276, 607
TspGWI ACGGA 2 cut(s) 188, 442
TspRI CASTG 2 cut(s) 613, 741
Van91I CCANNNNNTGG 1 cut(s) 648
VpaK11BI GGWCC 1 cut(s) 4
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.