RchiOBHm_Chr5g0061951

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000610
Physical Location & Seq
Reverse (-)
67544170 .. 67547443
3274 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33828

Sequence Viewer

Length: 1758 bp
ATGGGTGTTGCTCTTCTTTCACTTGTTAGGCACTTTGTTCTCTTTTTCATCACATTGGGTCTCATTCCTCATCAGCAAACTCTTGCAAGCATAACAAGGCACTACAAATTTGATGTATGTATCCAACTGCAAAATGTGACAAGGCTGTGCCACACCAAGAGCATTGTAACCGTAAACGGACAATTTCCTGGGCCTCGAATTGTTGCTAGGGAGGGTGATCACCTCCTCATTAAAGTGGTTAACCATGTTCAAAGCAATATCTCCATCCATTGGCATGGGATTCGACAGCTTCAAACCGGGTGGGCCGATGGTCCGGCATACATTACTCAATGCCCGATGCAAACCGGCAACAATTATGTGTATAACTTTACCATTATAGGCCAAAGAGGCACGCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACCACCTATGGCCCCTTAATCATTCTTCCCAAGCGTGGTGTTCCTTATCCATTTACCAAACCCTACAAGGAAGTTCCCATCATCTTTGGAGAATGGTGGAATGTGGATCCTGAAGCAGTCATAAACCAGGCCCTGCAGACTGGGGGAGGACCAAATGTTTCTGATGCTTATACGATTAATGGCCTCCCAGGACCTTTGTATAACTGCTCTGCCAAAGATACATTCAAGCTTAAGGTTCAAGTAGTTGGGAAGACATACCTTCTGCGCTTGATCAATGCAGCACTGAACGACGAACTTTTCTTCAGCATTGCAAATCATACCCTCAAAGTAGTCGAAACAGACGCTGTTTATGTTAAGCCCTTCGACACCAACACCATTCTCATTGCCCCGGGACAAACTACAAATGTTCTCCTCAAAACCAAGCCTAACTTCCCAAATGCCACATTTCTCATGACCGCAAGGCCATACGTGACTGGTCTAGGCACCTTTGACAACTCCACTGTTGCTGCCATTCTAGAGTACGAAACTACTACACTTCACTCAATCCTCCCATTGAACAAACTTCCGCTCCACAAACCAATTCTCCCAGCTCTAAACGACACATCGTTTGCAACAAAGTTCGCCAGCAAACTCCGCAGCTTAAACACTCCAGAGTTCCCAGCGAACGTCCCGCAGAAAGTTGACAAGCGTTTGTTCTTCACAATAGGACTTGGAACCAACCCATGTAGCCAGCAGCAGCACAAAAACCAAACCTGCCAAGGACCCAATGGAACCATGTTTGCTGCTTCAATCAACAACGTTTCTTTTACTATGCCAAACACTGCCTTACTCCAATCCCACTTTTCTGGCCAATCAAAGGGAGTTTATTCCCCTGACTTTCCGATCAGCCCTTCAATTCCATTTAATTACACAGGGGCCCAGCTGAACAATACTAATGTGAGCAATGGTACAAAACTTATGGTGCTTCCGTTTAACACTAGTGTGGAGTTGGTGCTGCAAGACACTAGTATTCTTGGTGCTGAAAGCCATCCTCTTCATCTTCATGGATTCAACTTCTTTGTTGTTGGTCAAGGGTTTGGCAACTTTGACCAGAATTATGACCCTAGGAAGTTCAATCTGGTTGACCCCGTTGAAAGAAACACGGTGAGTGTGCCCTCTGGTGGGTGGGTTGCCATTCGGTTTCTAGCAGATAACCCAGGTGTCTGGTTCATGCATTGCCACTTGGAAATTCACACTAGCTGGGGCTTGAAGATGGCTTGGGTAGTCTTAGATGGAGAGCTTCCCAATCAAAAGTTGCTTCCTCCACCACTGGATCTTCCTAAATGCTGA

Protein Analysis

585

Amino Acids

65.0

Weight (kDa)

9.01

Isoelectric Point (pI)

30.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 42 - 154 2.3e-40 Multicopper oxidase
Cu-oxidase PF00394 167 - 318 4.4e-41 Multicopper oxidase
Cu-oxidase_2 PF07731 436 - 567 1.2e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000610)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60020 AT5G60020 AT5G60020
fragaria_vesca FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1190
AccB1I GGYRCC 1 cut(s) 911
AccB7I CCANNNNNTGG 1 cut(s) 270
AccBSI CCGCTC 1 cut(s) 997
AciI CCGC 4 cut(s) 885, 995, 1063, 1100
AclI AACGTT 1 cut(s) 1227
AclWI GGATC 3 cut(s) 530, 543, 1749
AcoI YGGCCR 1 cut(s) 1276
AcsI RAATTY 2 cut(s) 107, 1656
AcuI CTGAAG 2 cut(s) 561, 715
AfaI GTAC 2 cut(s) 950, 1378
AfiI CCNNNNNNNGG 5 cut(s) 270, 464, 1285, 1589, 1590
AflII CTTAAG 1 cut(s) 659
AhlI ACTAGT 2 cut(s) 1406, 1433
AjnI CCWGG 4 cut(s) 187, 555, 616, 1624
AjuI GAANNNNNNNTTGG 4 cut(s) 635, 667, 842, 874
AleI CACNNNNGTG 1 cut(s) 1409
AluBI AGCT 7 cut(s) 289, 658, 1019, 1068, 1351, 1668, 1708
AluI AGCT 7 cut(s) 289, 658, 1019, 1068, 1351, 1668, 1708
Alw26I GTCTC 1 cut(s) 65
AlwI GGATC 3 cut(s) 530, 543, 1749
AlwNI CAGNNNCTG 2 cut(s) 562, 773
Ama87I CYCGRG 1 cut(s) 817
AoxI GGCC 9 cut(s) 191, 303, 379, 439, 558, 610, 890, 1276, 1344
ApaI GGGCCC 1 cut(s) 1348
ApeKI GCWGC 7 cut(s) 707, 935, 1065, 1162, 1165, 1211, 1423
ApoI RAATTY 2 cut(s) 107, 1656
ArsI GACNNNNNNTTYG 2 cut(s) 1019, 1051
AseI ATTAAT 1 cut(s) 606
AspA2I CCTAGG 1 cut(s) 1532
AspLEI GCGC 1 cut(s) 696
AsuC2I CCSGG 3 cut(s) 298, 818, 819
AsuHPI GGTGA 3 cut(s) 212, 227, 1585
AvaI CYCGRG 1 cut(s) 817
AvaII GGWCC 4 cut(s) 311, 578, 620, 1190
AvrII CCTAGG 1 cut(s) 1532
BaeGI GKGCMC 2 cut(s) 1348, 1584
BalI TGGCCA 1 cut(s) 1278
BamHI GGATCC 1 cut(s) 535
BanI GGYRCC 1 cut(s) 911
BanII GRGCYC 1 cut(s) 1348
BbsI GAAGAC 1 cut(s) 686
BbvI GCAGC 7 cut(s) 719, 922, 1077, 1174, 1177, 1198, 1410
BccI CCATC 6 cut(s) 272, 302, 515, 1464, 1675, 1694
BcgI CGANNNNNNTGC 2 cut(s) 263, 297
BciT130I CCWGG 4 cut(s) 189, 557, 618, 1626
BciVI GTATCC 1 cut(s) 131
BclI TGATCA 2 cut(s) 217, 699
BcnI CCSGG 3 cut(s) 298, 818, 819
BcoDI GTCTC 1 cut(s) 65
BcuI ACTAGT 2 cut(s) 1406, 1433
BfaI CTAG 8 cut(s) 207, 908, 944, 1407, 1434, 1533, 1613, 1665
BfmI CTRYAG 1 cut(s) 563
BfrI CTTAAG 1 cut(s) 659
BfuAI ACCTGC 1 cut(s) 1190
BfuI GTATCC 1 cut(s) 131
BglI GCCNNNNNGGC 1 cut(s) 387
BisI GCNGC 7 cut(s) 708, 936, 1066, 1163, 1166, 1212, 1424
BlnI CCTAGG 1 cut(s) 1532
BlsI GCNGC 7 cut(s) 709, 937, 1067, 1164, 1167, 1213, 1425
Bme1390I CCNGG 7 cut(s) 189, 298, 557, 618, 818, 819, 1626
Bme18I GGWCC 4 cut(s) 311, 578, 620, 1190
BmeT110I CYCGRG 1 cut(s) 817
BmiI GGNNCC 8 cut(s) 442, 537, 913, 1144, 1192, 1201, 1345, 1346
BmrFI CCNGG 7 cut(s) 189, 298, 557, 618, 818, 819, 1626
BmrI ACTGGG 1 cut(s) 579
BmsI GCATC 2 cut(s) 327, 583
BmuI ACTGGG 1 cut(s) 579
BpiI GAAGAC 1 cut(s) 686
BpmI CTGGAG 1 cut(s) 1062
BpuMI CCSGG 3 cut(s) 298, 818, 819
BsaAI YACGTR 1 cut(s) 898
BsaI GGTCTC 1 cut(s) 65
BsaJI CCNNGG 7 cut(s) 188, 616, 816, 817, 1186, 1532, 1624
BsaXI ACNNNNNCTCC 4 cut(s) 981, 996, 1011, 1026
Bsc4I CCNNNNNNNGG 5 cut(s) 270, 464, 1285, 1589, 1590
Bse118I RCCGGY 1 cut(s) 344
Bse1I ACTGG 3 cut(s) 574, 907, 1743
Bse3DI GCAATG 4 cut(s) 735, 810, 1378, 1642
BseBI CCWGG 4 cut(s) 189, 557, 618, 1626
BseDI CCNNGG 7 cut(s) 188, 616, 816, 817, 1186, 1532, 1624
BseGI GGATG 2 cut(s) 264, 1456
BseLI CCNNNNNNNGG 5 cut(s) 270, 464, 1285, 1589, 1590
BseMI GCAATG 4 cut(s) 735, 810, 1378, 1642
BseNI ACTGG 3 cut(s) 574, 907, 1743
BseRI GAGGAG 2 cut(s) 215, 830
BseSI GKGCMC 2 cut(s) 1348, 1584
BseXI GCAGC 7 cut(s) 719, 922, 1077, 1174, 1177, 1198, 1410
BseYI CCCAGC 4 cut(s) 1015, 1087, 1347, 1668
BshFI GGCC 9 cut(s) 193, 305, 381, 441, 560, 612, 892, 1278, 1346
BshNI GGYRCC 1 cut(s) 911
BsiHKCI CYCGRG 1 cut(s) 817
BsiSI CCGG 4 cut(s) 297, 314, 345, 818
BslFI GGGAC 2 cut(s) 834, 1082
BslI CCNNNNNNNGG 5 cut(s) 270, 464, 1285, 1589, 1590
BsmAI GTCTC 1 cut(s) 65
BsmFI GGGAC 2 cut(s) 834, 1082
BsnI GGCC 9 cut(s) 193, 305, 381, 441, 560, 612, 892, 1278, 1346
Bso31I GGTCTC 1 cut(s) 65
BsoBI CYCGRG 1 cut(s) 817
Bsp120I GGGCCC 1 cut(s) 1344
Bsp1286I GDGCHC 2 cut(s) 1348, 1584
Bsp143I GATC 6 cut(s) 217, 425, 535, 699, 1311, 1741
BspACI CCGC 4 cut(s) 885, 995, 1063, 1100
BspANI GGCC 9 cut(s) 193, 305, 381, 441, 560, 612, 892, 1278, 1346
BspHI TCATGA 1 cut(s) 879
BspLI GGNNCC 8 cut(s) 442, 537, 913, 1144, 1192, 1201, 1345, 1346
BspMAI CTGCAG 1 cut(s) 567
BspMI ACCTGC 1 cut(s) 1190
BspPI GGATC 3 cut(s) 530, 543, 1749
BspQI GCTCTTC 1 cut(s) 18
BspT107I GGYRCC 1 cut(s) 911
BspTI CTTAAG 1 cut(s) 659
BspTNI GGTCTC 1 cut(s) 65
BsrBI CCGCTC 1 cut(s) 997
BsrDI GCAATG 4 cut(s) 735, 810, 1378, 1642
BsrFI RCCGGY 1 cut(s) 344
BsrI ACTGG 3 cut(s) 574, 907, 1743
BssAI RCCGGY 1 cut(s) 344
BssECI CCNNGG 7 cut(s) 188, 616, 816, 817, 1186, 1532, 1624
BssMI GATC 6 cut(s) 217, 425, 535, 699, 1311, 1741
BssT1I CCWWGG 2 cut(s) 1186, 1532
Bst2UI CCWGG 4 cut(s) 189, 557, 618, 1626
Bst4CI ACNGT 3 cut(s) 172, 931, 1573
Bst6I CTCTTC 2 cut(s) 18, 1467
BstAFI CTTAAG 1 cut(s) 659
BstBAI YACGTR 1 cut(s) 898
BstC8I GCNNGC 5 cut(s) 88, 392, 405, 1054, 1160
BstDEI CTNAG 2 cut(s) 422, 1696
BstF5I GGATG 2 cut(s) 264, 1456
BstHHI GCGC 1 cut(s) 696
BstKTI GATC 6 cut(s) 220, 428, 538, 702, 1314, 1744
BstMAI GTCTC 1 cut(s) 65
BstMBI GATC 6 cut(s) 217, 425, 535, 699, 1311, 1741
BstMWI GCNNNNNNNGC 3 cut(s) 387, 400, 1062
BstNI CCWGG 4 cut(s) 189, 557, 618, 1626
BstNSI RCATGY 1 cut(s) 407
BstSCI CCNGG 7 cut(s) 187, 296, 555, 616, 816, 817, 1624
BstSFI CTRYAG 1 cut(s) 563
BstSLI GKGCMC 2 cut(s) 1348, 1584
BstV1I GCAGC 7 cut(s) 719, 922, 1077, 1174, 1177, 1198, 1410
BstV2I GAAGAC 1 cut(s) 686
BstX2I RGATCY 2 cut(s) 535, 1741
BstXI CCANNNNNNTGG 3 cut(s) 275, 1274, 1632
BstYI RGATCY 2 cut(s) 535, 1741
BsuI GTATCC 1 cut(s) 131
BsuRI GGCC 9 cut(s) 193, 305, 381, 441, 560, 612, 892, 1278, 1346
BtsCI GGATG 2 cut(s) 264, 1456
BtsI GCAGTG 1 cut(s) 1248
BtsIMutI CAGTG 4 cut(s) 710, 927, 1248, 1736
BveI ACCTGC 1 cut(s) 1190
Cac8I GCNNGC 5 cut(s) 88, 392, 405, 1054, 1160
CaiI CAGNNNCTG 2 cut(s) 562, 773
CciI TCATGA 1 cut(s) 879
CfoI GCGC 1 cut(s) 696
Cfr10I RCCGGY 1 cut(s) 344
Cfr9I CCCGGG 1 cut(s) 817
CseI GACGC 1 cut(s) 779
Csp6I GTAC 2 cut(s) 949, 1377
CspCI CAANNNNNGTGG 2 cut(s) 281, 316
CviAII CATG 9 cut(s) 245, 275, 404, 417, 880, 1152, 1204, 1472, 1639
CviQI GTAC 2 cut(s) 949, 1377
DdeI CTNAG 2 cut(s) 422, 1696
DpnI GATC 6 cut(s) 219, 427, 537, 701, 1313, 1743
DpnII GATC 6 cut(s) 217, 425, 535, 699, 1311, 1741
EaeI YGGCCR 1 cut(s) 1276
Eam1104I CTCTTC 2 cut(s) 18, 1467
EarI CTCTTC 2 cut(s) 18, 1467
Eco130I CCWWGG 2 cut(s) 1186, 1532
Eco24I GRGCYC 1 cut(s) 1348
Eco31I GGTCTC 1 cut(s) 65
Eco47I GGWCC 4 cut(s) 311, 578, 620, 1190
Eco57I CTGAAG 2 cut(s) 561, 715
Eco88I CYCGRG 1 cut(s) 817
EcoO109I RGGNCCY 4 cut(s) 559, 620, 1190, 1344
EcoRII CCWGG 4 cut(s) 187, 555, 616, 1624
EcoT14I CCWWGG 2 cut(s) 1186, 1532
EcoT22I ATGCAT 1 cut(s) 1644
EcoT38I GRGCYC 1 cut(s) 1348
ErhI CCWWGG 2 cut(s) 1186, 1532
FaeI CATG 9 cut(s) 248, 278, 407, 420, 883, 1155, 1207, 1475, 1642
FalI AAGNNNNNCTT 2 cut(s) 842, 874
FaqI GGGAC 2 cut(s) 834, 1082
FatI CATG 9 cut(s) 244, 274, 403, 416, 879, 1151, 1203, 1471, 1638
FauI CCCGC 1 cut(s) 1107
FbaI TGATCA 2 cut(s) 217, 699
Fnu4HI GCNGC 7 cut(s) 708, 936, 1066, 1163, 1166, 1212, 1424
FokI GGATG 2 cut(s) 251, 1443
FriOI GRGCYC 1 cut(s) 1348
Fsp4HI GCNGC 7 cut(s) 708, 936, 1066, 1163, 1166, 1212, 1424
FspBI CTAG 8 cut(s) 207, 908, 944, 1407, 1434, 1533, 1613, 1665
GlaI GCGC 1 cut(s) 695
GluI GCNGC 7 cut(s) 708, 936, 1066, 1163, 1166, 1212, 1424
GsaI CCCAGC 4 cut(s) 1019, 1091, 1351, 1672
GsuI CTGGAG 1 cut(s) 1062
HaeIII GGCC 9 cut(s) 193, 305, 381, 441, 560, 612, 892, 1278, 1346
HapII CCGG 4 cut(s) 297, 314, 345, 818
HgaI GACGC 1 cut(s) 779
HhaI GCGC 1 cut(s) 696
Hin1II CATG 9 cut(s) 248, 278, 407, 420, 883, 1155, 1207, 1475, 1642
Hin6I GCGC 1 cut(s) 694
HinP1I GCGC 1 cut(s) 694
HincII GTYRAC 3 cut(s) 241, 1111, 1552
HindII GTYRAC 3 cut(s) 241, 1111, 1552
HindIII AAGCTT 1 cut(s) 656
HinfI GANTC 2 cut(s) 280, 1476
HpaI GTTAAC 1 cut(s) 241
HpaII CCGG 4 cut(s) 297, 314, 345, 818
HphI GGTGA 3 cut(s) 212, 227, 1585
Hpy166II GTNNAC 4 cut(s) 175, 241, 1111, 1552
Hpy188I TCNGA 2 cut(s) 592, 1311
Hpy188III TCNNGA 4 cut(s) 539, 880, 944, 1079
Hpy8I GTNNAC 4 cut(s) 175, 241, 1111, 1552
Hpy99I CGWCG 1 cut(s) 722
HpyAV CCTTC 3 cut(s) 698, 799, 1329
HpyCH4III ACNGT 3 cut(s) 172, 931, 1573
HpyCH4IV ACGT 3 cut(s) 897, 1095, 1227
HpyCH4V TGCA 9 cut(s) 86, 130, 340, 565, 707, 740, 1040, 1426, 1642
HpyF10VI GCNNNNNNNGC 3 cut(s) 387, 400, 1062
HpyF3I CTNAG 2 cut(s) 422, 1696
HpySE526I ACGT 3 cut(s) 897, 1095, 1227
Hsp92II CATG 9 cut(s) 248, 278, 407, 420, 883, 1155, 1207, 1475, 1642
HspAI GCGC 1 cut(s) 694
Ksp22I TGATCA 2 cut(s) 217, 699
KspAI GTTAAC 1 cut(s) 241
Kzo9I GATC 6 cut(s) 217, 425, 535, 699, 1311, 1741
LguI GCTCTTC 1 cut(s) 18
LmnI GCTCC 1 cut(s) 1002
Lsp1109I GCAGC 7 cut(s) 719, 922, 1077, 1174, 1177, 1198, 1410
LweI GCATC 2 cut(s) 327, 583
MaeI CTAG 8 cut(s) 207, 908, 944, 1407, 1434, 1533, 1613, 1665
MaeII ACGT 3 cut(s) 897, 1095, 1227
MaeIII GTNAC 3 cut(s) 136, 166, 898
MalI GATC 6 cut(s) 219, 427, 537, 701, 1313, 1743
MbiI CCGCTC 1 cut(s) 997
MboI GATC 6 cut(s) 217, 425, 535, 699, 1311, 1741
MboII GAAGA 9 cut(s) 5, 446, 691, 721, 1117, 1454, 1460, 1690, 1736
MflI RGATCY 2 cut(s) 535, 1741
MhlI GDGCHC 2 cut(s) 1348, 1584
MlsI TGGCCA 1 cut(s) 1278
MluCI AATT 9 cut(s) 107, 182, 198, 352, 1008, 1323, 1333, 1522, 1656
MluNI TGGCCA 1 cut(s) 1278
MmeI TCCRAC 1 cut(s) 148
Mox20I TGGCCA 1 cut(s) 1278
Mph1103I ATGCAT 1 cut(s) 1644
MscI TGGCCA 1 cut(s) 1278
MseI TTAA 9 cut(s) 231, 240, 446, 606, 660, 783, 1070, 1332, 1401
MslI CAYNNNNRTG 4 cut(s) 233, 273, 1409, 1470
Msp20I TGGCCA 1 cut(s) 1278
MspA1I CMGCKG 1 cut(s) 1351
MspCI CTTAAG 1 cut(s) 659
MspI CCGG 4 cut(s) 297, 314, 345, 818
MspR9I CCNGG 7 cut(s) 189, 298, 557, 618, 818, 819, 1626
MvaI CCWGG 4 cut(s) 189, 557, 618, 1626
MwoI GCNNNNNNNGC 3 cut(s) 387, 400, 1062
NciI CCSGG 3 cut(s) 298, 818, 819
NdeII GATC 6 cut(s) 217, 425, 535, 699, 1311, 1741
NlaIII CATG 9 cut(s) 248, 278, 407, 420, 883, 1155, 1207, 1475, 1642
NlaIV GGNNCC 8 cut(s) 442, 537, 913, 1144, 1192, 1201, 1345, 1346
NmuCI GTSAC 2 cut(s) 136, 898
NsiI ATGCAT 1 cut(s) 1644
NspI RCATGY 1 cut(s) 407
OliI CACNNNNGTG 1 cut(s) 1409
PaeI GCATGC 1 cut(s) 407
PagI TCATGA 1 cut(s) 879
PciSI GCTCTTC 1 cut(s) 18
PfeI GAWTC 2 cut(s) 280, 1476
PflMI CCANNNNNTGG 1 cut(s) 270
PkrI GCNGC 7 cut(s) 709, 937, 1067, 1164, 1167, 1213, 1425
Ppu21I YACGTR 1 cut(s) 898
PpuMI RGGWCCY 2 cut(s) 620, 1190
PshBI ATTAAT 1 cut(s) 606
Psp1406I AACGTT 1 cut(s) 1227
Psp5II RGGWCCY 2 cut(s) 620, 1190
Psp6I CCWGG 4 cut(s) 187, 555, 616, 1624
PspFI CCCAGC 4 cut(s) 1015, 1087, 1347, 1668
PspGI CCWGG 4 cut(s) 187, 555, 616, 1624
PspN4I GGNNCC 8 cut(s) 442, 537, 913, 1144, 1192, 1201, 1345, 1346
PspOMI GGGCCC 1 cut(s) 1344
PspPPI RGGWCCY 2 cut(s) 620, 1190
PstI CTGCAG 1 cut(s) 567
PstNI CAGNNNCTG 2 cut(s) 562, 773
PsuI RGATCY 2 cut(s) 535, 1741
PvuII CAGCTG 1 cut(s) 1351
RsaI GTAC 2 cut(s) 950, 1378
RsaNI GTAC 2 cut(s) 949, 1377
RseI CAYNNNNRTG 4 cut(s) 233, 273, 1409, 1470
SapI GCTCTTC 1 cut(s) 18
SaqAI TTAA 9 cut(s) 231, 240, 446, 606, 660, 783, 1070, 1332, 1401
SatI GCNGC 7 cut(s) 708, 936, 1066, 1163, 1166, 1212, 1424
Sau3AI GATC 6 cut(s) 217, 425, 535, 699, 1311, 1741
ScrFI CCNGG 7 cut(s) 189, 298, 557, 618, 818, 819, 1626
SduI GDGCHC 2 cut(s) 1348, 1584
SfaNI GCATC 2 cut(s) 327, 583
SfcI CTRYAG 1 cut(s) 563
SinI GGWCC 4 cut(s) 311, 578, 620, 1190
SmaI CCCGGG 1 cut(s) 819
SmiMI CAYNNNNRTG 4 cut(s) 233, 273, 1409, 1470
SmlI CTYRAG 1 cut(s) 659
SmoI CTYRAG 1 cut(s) 659
SpeI ACTAGT 2 cut(s) 1406, 1433
SphI GCATGC 1 cut(s) 407
Sse9I AATT 9 cut(s) 107, 182, 198, 352, 1008, 1323, 1333, 1522, 1656
SsiI CCGC 4 cut(s) 885, 995, 1063, 1100
SspMI CTAG 8 cut(s) 207, 908, 944, 1407, 1434, 1533, 1613, 1665
StyD4I CCNGG 7 cut(s) 187, 296, 555, 616, 816, 817, 1624
StyI CCWWGG 2 cut(s) 1186, 1532
TaaI ACNGT 3 cut(s) 172, 931, 1573
TaiI ACGT 3 cut(s) 900, 1098, 1230
TaqI TCGA 4 cut(s) 196, 283, 762, 792
TasI AATT 9 cut(s) 107, 182, 198, 352, 1008, 1323, 1333, 1522, 1656
TfiI GAWTC 2 cut(s) 280, 1476
Tru1I TTAA 9 cut(s) 231, 240, 446, 606, 660, 783, 1070, 1332, 1401
Tru9I TTAA 9 cut(s) 231, 240, 446, 606, 660, 783, 1070, 1332, 1401
TscAI CASTG 4 cut(s) 717, 934, 1255, 1743
TseFI GTSAC 2 cut(s) 136, 898
TseI GCWGC 7 cut(s) 707, 935, 1065, 1162, 1165, 1211, 1423
Tsp45I GTSAC 2 cut(s) 136, 898
TspDTI ATGAA 5 cut(s) 37, 405, 1454, 1460, 1627
TspGWI ACGGA 2 cut(s) 192, 1386
TspMI CCCGGG 1 cut(s) 817
TspRI CASTG 4 cut(s) 717, 934, 1255, 1743
Van91I CCANNNNNTGG 1 cut(s) 270
Vha464I CTTAAG 1 cut(s) 659
VpaK11BI GGWCC 4 cut(s) 311, 578, 620, 1190
VspI ATTAAT 1 cut(s) 606
XapI RAATTY 2 cut(s) 107, 1656
XbaI TCTAGA 1 cut(s) 943
XceI RCATGY 1 cut(s) 407
XcmI CCANNNNNNNNNTGG 1 cut(s) 1193
XmaI CCCGGG 1 cut(s) 817
XmaJI CCTAGG 1 cut(s) 1532
XspI CTAG 8 cut(s) 207, 908, 944, 1407, 1434, 1533, 1613, 1665
Zsp2I ATGCAT 1 cut(s) 1644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.