Prupe.6G089100_v2.0.a1

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000610
Physical Location & Seq
Forward (+)
6099693 .. 6103066
3374 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G089100.1

Sequence Viewer

Length: 1752 bp
ATGGGTGTTCTTCTTCTTTCATCACCAGCATTTCCTACATTCTTTCTCTTCTCTCTCATAGCATTATGTCTCGTTCCTCAGTATGCTCTTGCAAGCATAACGAGGCACTACAAGTTTGAAATCAAACAGCAAAATGTGACCAGATTGTGCCACACAAAGAGCATTGTAACAGTAAACGGCCAGTTTCCCGGGCCTCGAATTGTTGCTAGGGAGGGTGATCGCCTCCTTATTAAAGTGGTTAACCATGTCCAACACAACATCTCTATCCATTGGCACGGCATTCGACAGCTTCGAACAGGGTGGGCTGATGGGCCTGCATATGTGACCCAATGTCCCATACAAACAGGCAACAGCTATGTGTACAACTTCACCATTGTAGGCCAAAGAGGCACTCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACTCTTTATGGCCCCATAGTCATCCTTCCCAAGCTTGGTGTGCCTTACCCATTCACTAAACCCTACAAGGAGGTTCCGATCATCTTCGGAGAGTGGTGGAATGCAGACCCTGAGGCAGTCATTAAGCAGGCCTTGCAAACAGGAGGAGGGCCAAATGTTTCCGATGCTTATACCTTCAATGGACTTCCAGGGCCCTTGTACAACTGTTCTGCCAAAGATGCATTCAAGCTAAAGGTGAAATCTGGGAAGACCTACCTTCTCCGCCTAATCAACGCAGCACTCAATGATGAGCTCTTCTTCAGCATTGCAAACCACACCCTCAAAGTGGTAGACGCCGATGCTGTTTATGTCAAACCTTTTGAGACTGACACAATTCTCATTACCCCTGGGCAGACTACAAATGTTCTGCTGAAGACCAAGCCCCATTTCCCAAATGCCACATTTTTCATGACTGCCAGGCCATACGTGACTGGACTAGGCACCTTTGACAACTCCACTGTTGCTGGTATTTTAGAGTACGAATCACCCTCCAAAACCCTCCACTCAACCCTCCCAATGAAGAAACTTCCACTATTTAAACCAATTCTGCCCGCTCTAAACGACACATCCTTTGCAACAAAGTTCAGCAACAAACTCCGTAGTTTAGCCAATGCACAATTCCCGGCTAATGTCCCCAAAAGGGTTGACAAGCACTTTTTCTTCACAGTAGGCCTTGGAACCAACCCCTGCAACAAGCATAACCAAACCTGCCAGGGACCTAATGGAACAATGTTTGCTGCTTCAGTGAATAACGTTTCTTTTGTAATGCCAACCACTGCTCTACTCCAAGCCCACTTCTCCGGGCAATCAAATCGGGTTTACAGCTCTAACTTGCCAAGCAGTCCAGTGATCCCATTTAACTATACAGGAACCCCACCAAACAATACTATGGTGAGCAATGGTACAAAGCTAGTGGTACTTCCATTTAACACTAGTGTGGAGTTGATCATGCAGGACACAAGCATTCTTGGTGCCGAAAGCCACCCTCTTCATCTGCATGGATATAATTTCTTTGTTGTTGGCCAAGGGTTTGGGAACTTTGACCAAAATAAGGACCCTGCAAACTTCAATTTGGTCGACCCTGTTGAAAGAAATACCGTGGGTGTGCCCTCTGGTGGATGGGTCGCTATACGATTTCTAGCAGATAATCCCGGTGTATGGTTTATGCATTGCCACTTGGAGATCCATACTAGTTGGGGCTTGAAGATGGCTTGGGTAGTCTTAGATGGAAAGCTTCCCAACCAGAAGTTGCTTCCTCCACCGGCTGATCTTCCCACATGTTAA

Protein Analysis

584

Amino Acids

64.49

Weight (kDa)

9.33

Isoelectric Point (pI)

31.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000610)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60020 AT5G60020 AT5G60020
fragaria_vesca FvH4_2g09062 FvH4_2g09062 FvH4_3g05920 FvH4_3g34100 FvH4_3g34310 FvH4_3g34340 FvH4_6g13390
malus_domestica MD00G1015000.v1.1 MD03G1106500.v1.1 MD03G1106600.v1.1 MD04G1131500.v1.1 MD11G1118900.v1.1 MD11G1119000.v1.1 MD12G1144600.v1.1
prunus_persica Prupe.6G089100_v2.0.a1 Prupe.6G089300_v2.0.a1 Prupe.6G258000_v2.0.a1
pyrus_communis pycom03g08590 pycom10g02940 pycom11g09990 pycom11g10060
rosa_chinensis RchiOBHm_Chr2g0154491 RchiOBHm_Chr3g0466271 RchiOBHm_Chr5g0061891 RchiOBHm_Chr5g0061911 RchiOBHm_Chr5g0061951 RchiOBHm_Chr5g0061961 RchiOBHm_Chr6g0264371
rosa_laevigata RLG00000024591 RLG00000035514 RLG00000035516 RLG00000035518 RLG00000035519
rosa_multiflora Rmu_sc0003480.1_g000021 Rmu_sc0011641.1_g000002 Rmu_sc0011641.1_g000009
rosa_roxburghii Rroxscaffold_1G00018790 Rroxscaffold_1G00018820 Rroxscaffold_1G00018850 Rroxscaffold_2G00122520 Rroxscaffold_2G00122540 Rroxscaffold_6G00414660
rosa_rugosa Rorug03G0080700 Rorug04G0180900 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345000 Rorug05G0345100 Rorug05G0345200 Rorug06G0011800
rosa_samantha Rh3DG148900 Rh5AG405700 Rh5AG406100 Rh5AG406200 Rh5BG419200 Rh5BG419400 Rh5CG443100 Rh5CG443300 Rh5CG443500 Rh5CG443600 Rh5DG432700 Rh5DG434900 Rh6BG128700 Rh6CG127600 Rh6DG114200 Rh6DG114300
rosa_wichuraiana Rw3G011980 Rw5G038100 Rw5G038140 Rw5G038160 Rw5G038200 Rw5G038210 Rw5G038250 Rw5G038270 Rw5G038290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1184
AccB1I GGYRCC 2 cut(s) 908, 1439
AccBSI CCGCTC 1 cut(s) 1022
AccI GTMKAC 2 cut(s) 759, 1545
AciI CCGC 2 cut(s) 691, 1020
AclI AACGTT 1 cut(s) 1221
AclWI GGATC 2 cut(s) 1312, 1645
AcoI YGGCCR 2 cut(s) 178, 1489
AcuI CTGAAG 3 cut(s) 712, 860, 1194
AcyI GRCGYC 1 cut(s) 762
AfaI GTAC 5 cut(s) 362, 629, 947, 1372, 1386
AfiI CCNNNNNNNGG 6 cut(s) 464, 754, 1108, 1519, 1583, 1626
AflIII ACRYGT 1 cut(s) 1745
AgsI TTSAA 6 cut(s) 119, 607, 655, 1537, 1556, 1672
AhdI GACNNNNNGTC 1 cut(s) 330
AhlI ACTAGT 2 cut(s) 1400, 1658
AjnI CCWGG 4 cut(s) 616, 814, 884, 1179
AjuI GAANNNNNNNTTGG 6 cut(s) 635, 667, 839, 871, 1070, 1102
AleI CACNNNNGTG 1 cut(s) 1403
AluBI AGCT 8 cut(s) 289, 354, 463, 658, 721, 1293, 1378, 1702
AluI AGCT 8 cut(s) 289, 354, 463, 658, 721, 1293, 1378, 1702
Alw21I GWGCWC 1 cut(s) 723
Alw26I GTCTC 2 cut(s) 74, 785
AlwI GGATC 2 cut(s) 1312, 1645
AlwNI CAGNNNCTG 1 cut(s) 539
Ama87I CYCGRG 1 cut(s) 188
ApaI GGGCCC 1 cut(s) 624
ApeKI GCWGC 2 cut(s) 704, 1205
ArsI GACNNNNNNTTYG 2 cut(s) 1022, 1054
AspS9I GGNCC 8 cut(s) 191, 311, 440, 578, 620, 621, 1184, 1522
AsuC2I CCSGG 5 cut(s) 189, 190, 1091, 1270, 1620
AsuHPI GGTGA 6 cut(s) 15, 227, 361, 676, 945, 1372
AsuII TTCGAA 1 cut(s) 292
AvaI CYCGRG 1 cut(s) 188
AvaII GGWCC 2 cut(s) 1184, 1522
AxyI CCTNAGG 1 cut(s) 540
BaeGI GKGCMC 2 cut(s) 624, 1578
BalI TGGCCA 1 cut(s) 1491
BanI GGYRCC 2 cut(s) 908, 1439
BanII GRGCYC 2 cut(s) 624, 723
BbsI GAAGAC 2 cut(s) 683, 848
Bbv12I GWGCWC 1 cut(s) 723
BbvI GCAGC 2 cut(s) 716, 1192
BccI CCATC 4 cut(s) 302, 1581, 1669, 1688
BceAI ACGGC 2 cut(s) 193, 292
BcgI CGANNNNNNTGC 4 cut(s) 263, 297, 1262, 1296
BciT130I CCWGG 4 cut(s) 618, 816, 886, 1181
BclI TGATCA 1 cut(s) 1413
BcnI CCSGG 5 cut(s) 189, 190, 1091, 1270, 1620
BcoDI GTCTC 2 cut(s) 74, 785
BcuI ACTAGT 2 cut(s) 1400, 1658
BfaI CTAG 6 cut(s) 207, 905, 1379, 1401, 1607, 1659
BfuAI ACCTGC 1 cut(s) 1184
BglI GCCNNNNNGGC 1 cut(s) 387
BisI GCNGC 2 cut(s) 705, 1206
BlsI GCNGC 2 cut(s) 706, 1207
Bme1390I CCNGG 9 cut(s) 189, 190, 618, 816, 886, 1091, 1181, 1270, 1620
Bme18I GGWCC 2 cut(s) 1184, 1522
BmeRI GACNNNNNGTC 1 cut(s) 330
BmeT110I CYCGRG 1 cut(s) 188
BmgT120I GGNCC 8 cut(s) 191, 311, 440, 578, 620, 621, 1184, 1522
BmiI GGNNCC 9 cut(s) 442, 504, 622, 910, 1147, 1185, 1339, 1441, 1524
BmrFI CCNGG 9 cut(s) 189, 190, 618, 816, 886, 1091, 1181, 1270, 1620
BmsI GCATC 3 cut(s) 583, 637, 757
BpiI GAAGAC 2 cut(s) 683, 848
Bpu14I TTCGAA 1 cut(s) 292
BpuMI CCSGG 5 cut(s) 189, 190, 1091, 1270, 1620
BsaAI YACGTR 1 cut(s) 895
BsaHI GRCGYC 1 cut(s) 762
BsaJI CCNNGG 8 cut(s) 188, 617, 814, 815, 1141, 1180, 1492, 1566
Bsc4I CCNNNNNNNGG 6 cut(s) 464, 754, 1108, 1519, 1583, 1626
Bse118I RCCGGY 1 cut(s) 1729
Bse1I ACTGG 3 cut(s) 181, 904, 1313
Bse21I CCTNAGG 1 cut(s) 540
Bse3DI GCAATG 3 cut(s) 732, 1372, 1636
BseBI CCWGG 4 cut(s) 618, 816, 886, 1181
BseDI CCNNGG 8 cut(s) 188, 617, 814, 815, 1141, 1180, 1492, 1566
BseGI GGATG 3 cut(s) 450, 1034, 1592
BseLI CCNNNNNNNGG 6 cut(s) 464, 754, 1108, 1519, 1583, 1626
BseMI GCAATG 3 cut(s) 732, 1372, 1636
BseMII CTCAG 2 cut(s) 92, 531
BseNI ACTGG 3 cut(s) 181, 904, 1313
BseRI GAGGAG 1 cut(s) 588
BseSI GKGCMC 2 cut(s) 624, 1578
BseXI GCAGC 2 cut(s) 716, 1192
BshNI GGYRCC 2 cut(s) 908, 1439
BsiHKAI GWGCWC 1 cut(s) 723
BsiHKCI CYCGRG 1 cut(s) 188
BsiSI CCGG 5 cut(s) 189, 1091, 1269, 1620, 1730
BslFI GGGAC 3 cut(s) 318, 1085, 1197
BslI CCNNNNNNNGG 6 cut(s) 464, 754, 1108, 1519, 1583, 1626
BsmAI GTCTC 2 cut(s) 74, 785
BsmFI GGGAC 3 cut(s) 318, 1085, 1197
BsmI GAATGC 4 cut(s) 279, 535, 650, 1431
BsoBI CYCGRG 1 cut(s) 188
Bsp119I TTCGAA 1 cut(s) 292
Bsp120I GGGCCC 1 cut(s) 620
Bsp1286I GDGCHC 3 cut(s) 624, 723, 1578
Bsp1407I TGTACA 2 cut(s) 360, 627
Bsp143I GATC 7 cut(s) 217, 425, 507, 1317, 1413, 1650, 1735
BspACI CCGC 2 cut(s) 691, 1020
BspCNI CTCAG 2 cut(s) 91, 532
BspHI TCATGA 1 cut(s) 876
BspLI GGNNCC 9 cut(s) 442, 504, 622, 910, 1147, 1185, 1339, 1441, 1524
BspMI ACCTGC 1 cut(s) 1184
BspPI GGATC 2 cut(s) 1312, 1645
BspQI GCTCTTC 1 cut(s) 728
BspT104I TTCGAA 1 cut(s) 292
BspT107I GGYRCC 2 cut(s) 908, 1439
BsrBI CCGCTC 1 cut(s) 1022
BsrDI GCAATG 3 cut(s) 732, 1372, 1636
BsrFI RCCGGY 1 cut(s) 1729
BsrGI TGTACA 2 cut(s) 360, 627
BsrI ACTGG 3 cut(s) 181, 904, 1313
BssAI RCCGGY 1 cut(s) 1729
BssECI CCNNGG 8 cut(s) 188, 617, 814, 815, 1141, 1180, 1492, 1566
BssMI GATC 7 cut(s) 217, 425, 507, 1317, 1413, 1650, 1735
BssNI GRCGYC 1 cut(s) 762
BssT1I CCWWGG 2 cut(s) 1141, 1492
Bst2UI CCWGG 4 cut(s) 618, 816, 886, 1181
Bst4CI ACNGT 5 cut(s) 172, 635, 928, 1135, 1567
Bst6I CTCTTC 3 cut(s) 53, 728, 1461
BstACI GRCGYC 1 cut(s) 762
BstAPI GCANNNNNTGC 1 cut(s) 562
BstAUI TGTACA 2 cut(s) 360, 627
BstBAI YACGTR 1 cut(s) 895
BstBI TTCGAA 1 cut(s) 292
BstC8I GCNNGC 5 cut(s) 94, 315, 405, 558, 1020
BstDEI CTNAG 4 cut(s) 78, 422, 540, 1690
BstDSI CCRYGG 1 cut(s) 1566
BstF5I GGATG 3 cut(s) 450, 1034, 1592
BstKTI GATC 7 cut(s) 220, 428, 510, 1320, 1416, 1653, 1738
BstMAI GTCTC 2 cut(s) 74, 785
BstMBI GATC 7 cut(s) 217, 425, 507, 1317, 1413, 1650, 1735
BstMWI GCNNNNNNNGC 4 cut(s) 387, 469, 562, 647
BstNI CCWGG 4 cut(s) 618, 816, 886, 1181
BstNSI RCATGY 2 cut(s) 407, 1749
BstSCI CCNGG 9 cut(s) 187, 188, 616, 814, 884, 1089, 1179, 1268, 1618
BstSLI GKGCMC 2 cut(s) 624, 1578
BstV1I GCAGC 2 cut(s) 716, 1192
BstV2I GAAGAC 2 cut(s) 683, 848
BstX2I RGATCY 1 cut(s) 1650
BstXI CCANNNNNNTGG 1 cut(s) 1499
BstYI RGATCY 1 cut(s) 1650
Bsu36I CCTNAGG 1 cut(s) 540
BtgI CCRYGG 1 cut(s) 1566
BtsCI GGATG 3 cut(s) 450, 1034, 1592
BtsI GCAGTG 1 cut(s) 1242
BtsIMutI CAGTG 4 cut(s) 924, 1218, 1242, 1320
BveI ACCTGC 1 cut(s) 1184
Cac8I GCNNGC 5 cut(s) 94, 315, 405, 558, 1020
CaiI CAGNNNCTG 1 cut(s) 539
CciI TCATGA 1 cut(s) 876
Cfr10I RCCGGY 1 cut(s) 1729
Cfr13I GGNCC 8 cut(s) 191, 311, 440, 578, 620, 621, 1184, 1522
Cfr9I CCCGGG 1 cut(s) 188
CseI GACGC 1 cut(s) 770
Csp6I GTAC 5 cut(s) 361, 628, 946, 1371, 1385
CspCI CAANNNNNGTGG 2 cut(s) 1362, 1397
CviAII CATG 7 cut(s) 245, 404, 417, 877, 1417, 1466, 1746
CviQI GTAC 5 cut(s) 361, 628, 946, 1371, 1385
DdeI CTNAG 4 cut(s) 78, 422, 540, 1690
DpnI GATC 7 cut(s) 219, 427, 509, 1319, 1415, 1652, 1737
DpnII GATC 7 cut(s) 217, 425, 507, 1317, 1413, 1650, 1735
DraI TTTAAA 1 cut(s) 1006
DriI GACNNNNNGTC 1 cut(s) 330
EaeI YGGCCR 2 cut(s) 178, 1489
Eam1104I CTCTTC 3 cut(s) 53, 728, 1461
Eam1105I GACNNNNNGTC 1 cut(s) 330
EarI CTCTTC 3 cut(s) 53, 728, 1461
EciI GGCGGA 1 cut(s) 680
Ecl136II GAGCTC 1 cut(s) 721
Eco130I CCWWGG 2 cut(s) 1141, 1492
Eco147I AGGCCT 2 cut(s) 560, 1140
Eco24I GRGCYC 2 cut(s) 624, 723
Eco47I GGWCC 2 cut(s) 1184, 1522
Eco53kI GAGCTC 1 cut(s) 721
Eco57I CTGAAG 3 cut(s) 712, 860, 1194
Eco81I CCTNAGG 1 cut(s) 540
Eco88I CYCGRG 1 cut(s) 188
EcoICRI GAGCTC 1 cut(s) 721
EcoO109I RGGNCCY 4 cut(s) 620, 621, 1184, 1522
EcoRII CCWGG 4 cut(s) 616, 814, 884, 1179
EcoT14I CCWWGG 2 cut(s) 1141, 1492
EcoT22I ATGCAT 2 cut(s) 652, 1638
EcoT38I GRGCYC 2 cut(s) 624, 723
ErhI CCWWGG 2 cut(s) 1141, 1492
FaeI CATG 7 cut(s) 248, 407, 420, 880, 1420, 1469, 1749
FalI AAGNNNNNCTT 2 cut(s) 545, 577
FaqI GGGAC 3 cut(s) 318, 1085, 1197
FatI CATG 7 cut(s) 244, 403, 416, 876, 1416, 1465, 1745
FauI CCCGC 1 cut(s) 1027
FauNDI CATATG 1 cut(s) 319
FbaI TGATCA 1 cut(s) 1413
FblI GTMKAC 2 cut(s) 759, 1545
Fnu4HI GCNGC 2 cut(s) 705, 1206
FokI GGATG 3 cut(s) 437, 1021, 1599
FriOI GRGCYC 2 cut(s) 624, 723
Fsp4HI GCNGC 2 cut(s) 705, 1206
FspBI CTAG 6 cut(s) 207, 905, 1379, 1401, 1607, 1659
GluI GCNGC 2 cut(s) 705, 1206
HapII CCGG 5 cut(s) 189, 1091, 1269, 1620, 1730
HgaI GACGC 1 cut(s) 770
Hin1I GRCGYC 1 cut(s) 762
Hin1II CATG 7 cut(s) 248, 407, 420, 880, 1420, 1469, 1749
HincII GTYRAC 3 cut(s) 241, 1114, 1546
HindII GTYRAC 3 cut(s) 241, 1114, 1546
HindIII AAGCTT 2 cut(s) 461, 1700
HinfI GANTC 1 cut(s) 950
HpaI GTTAAC 1 cut(s) 241
HpaII CCGG 5 cut(s) 189, 1091, 1269, 1620, 1730
HphI GGTGA 6 cut(s) 15, 227, 361, 676, 945, 1372
Hpy166II GTNNAC 7 cut(s) 175, 241, 361, 760, 1114, 1288, 1546
Hpy188I TCNGA 3 cut(s) 507, 518, 592
Hpy188III TCNNGA 1 cut(s) 877
Hpy8I GTNNAC 7 cut(s) 175, 241, 361, 760, 1114, 1288, 1546
HpyAV CCTTC 3 cut(s) 464, 613, 695
HpyCH4III ACNGT 5 cut(s) 172, 635, 928, 1135, 1567
HpyCH4IV ACGT 2 cut(s) 894, 1221
HpyF10VI GCNNNNNNNGC 4 cut(s) 387, 469, 562, 647
HpyF3I CTNAG 4 cut(s) 78, 422, 540, 1690
HpySE526I ACGT 2 cut(s) 894, 1221
Hsp92I GRCGYC 1 cut(s) 762
Hsp92II CATG 7 cut(s) 248, 407, 420, 880, 1420, 1469, 1749
Ksp22I TGATCA 1 cut(s) 1413
KspAI GTTAAC 1 cut(s) 241
Kzo9I GATC 7 cut(s) 217, 425, 507, 1317, 1413, 1650, 1735
LguI GCTCTTC 1 cut(s) 728
Lsp1109I GCAGC 2 cut(s) 716, 1192
LweI GCATC 3 cut(s) 583, 637, 757
MaeI CTAG 6 cut(s) 207, 905, 1379, 1401, 1607, 1659
MaeII ACGT 2 cut(s) 894, 1221
MaeIII GTNAC 4 cut(s) 136, 166, 322, 895
MalI GATC 7 cut(s) 219, 427, 509, 1319, 1415, 1652, 1737
MbiI CCGCTC 1 cut(s) 1022
MboI GATC 7 cut(s) 217, 425, 507, 1317, 1413, 1650, 1735
MflI RGATCY 1 cut(s) 1650
MhlI GDGCHC 3 cut(s) 624, 723, 1578
MlsI TGGCCA 1 cut(s) 1491
MluCI AATT 6 cut(s) 198, 801, 1011, 1085, 1474, 1537
MluNI TGGCCA 1 cut(s) 1491
MmeI TCCRAC 1 cut(s) 274
Mox20I TGGCCA 1 cut(s) 1491
Mph1103I ATGCAT 2 cut(s) 652, 1638
MscI TGGCCA 1 cut(s) 1491
MseI TTAA 7 cut(s) 231, 240, 552, 1005, 1326, 1395, 1750
MslI CAYNNNNRTG 2 cut(s) 1403, 1464
Msp20I TGGCCA 1 cut(s) 1491
MspI CCGG 5 cut(s) 189, 1091, 1269, 1620, 1730
MspR9I CCNGG 9 cut(s) 189, 190, 618, 816, 886, 1091, 1181, 1270, 1620
Mva1269I GAATGC 4 cut(s) 279, 535, 650, 1431
MvaI CCWGG 4 cut(s) 618, 816, 886, 1181
MwoI GCNNNNNNNGC 4 cut(s) 387, 469, 562, 647
NciI CCSGG 5 cut(s) 189, 190, 1091, 1270, 1620
NdeI CATATG 1 cut(s) 319
NdeII GATC 7 cut(s) 217, 425, 507, 1317, 1413, 1650, 1735
NlaIII CATG 7 cut(s) 248, 407, 420, 880, 1420, 1469, 1749
NlaIV GGNNCC 9 cut(s) 442, 504, 622, 910, 1147, 1185, 1339, 1441, 1524
NmuCI GTSAC 3 cut(s) 136, 322, 895
NsiI ATGCAT 2 cut(s) 652, 1638
NspI RCATGY 2 cut(s) 407, 1749
NspV TTCGAA 1 cut(s) 292
OliI CACNNNNGTG 1 cut(s) 1403
PaeI GCATGC 1 cut(s) 407
PagI TCATGA 1 cut(s) 876
PasI CCCWGGG 1 cut(s) 815
PceI AGGCCT 2 cut(s) 560, 1140
PciI ACATGT 1 cut(s) 1745
PciSI GCTCTTC 1 cut(s) 728
PcsI WCGNNNNNNNCGW 1 cut(s) 289
PctI GAATGC 4 cut(s) 279, 535, 650, 1431
PfeI GAWTC 1 cut(s) 950
PkrI GCNGC 2 cut(s) 706, 1207
Ppu21I YACGTR 1 cut(s) 895
PpuMI RGGWCCY 2 cut(s) 1184, 1522
PscI ACATGT 1 cut(s) 1745
Psp124BI GAGCTC 1 cut(s) 723
Psp1406I AACGTT 1 cut(s) 1221
Psp5II RGGWCCY 2 cut(s) 1184, 1522
Psp6I CCWGG 4 cut(s) 616, 814, 884, 1179
PspGI CCWGG 4 cut(s) 616, 814, 884, 1179
PspN4I GGNNCC 9 cut(s) 442, 504, 622, 910, 1147, 1185, 1339, 1441, 1524
PspOMI GGGCCC 1 cut(s) 620
PspPI GGNCC 8 cut(s) 191, 311, 440, 578, 620, 621, 1184, 1522
PspPPI RGGWCCY 2 cut(s) 1184, 1522
PstNI CAGNNNCTG 1 cut(s) 539
PsuI RGATCY 1 cut(s) 1650
RsaI GTAC 5 cut(s) 362, 629, 947, 1372, 1386
RsaNI GTAC 5 cut(s) 361, 628, 946, 1371, 1385
RseI CAYNNNNRTG 2 cut(s) 1403, 1464
SacI GAGCTC 1 cut(s) 723
SalI GTCGAC 1 cut(s) 1544
SapI GCTCTTC 1 cut(s) 728
SaqAI TTAA 7 cut(s) 231, 240, 552, 1005, 1326, 1395, 1750
SatI GCNGC 2 cut(s) 705, 1206
Sau3AI GATC 7 cut(s) 217, 425, 507, 1317, 1413, 1650, 1735
Sau96I GGNCC 8 cut(s) 191, 311, 440, 578, 620, 621, 1184, 1522
ScrFI CCNGG 9 cut(s) 189, 190, 618, 816, 886, 1091, 1181, 1270, 1620
SduI GDGCHC 3 cut(s) 624, 723, 1578
SfaNI GCATC 3 cut(s) 583, 637, 757
SfuI TTCGAA 1 cut(s) 292
SinI GGWCC 2 cut(s) 1184, 1522
SmaI CCCGGG 1 cut(s) 190
SmiMI CAYNNNNRTG 2 cut(s) 1403, 1464
SpeI ACTAGT 2 cut(s) 1400, 1658
SphI GCATGC 1 cut(s) 407
Sse9I AATT 6 cut(s) 198, 801, 1011, 1085, 1474, 1537
SseBI AGGCCT 2 cut(s) 560, 1140
SsiI CCGC 2 cut(s) 691, 1020
SspMI CTAG 6 cut(s) 207, 905, 1379, 1401, 1607, 1659
SstI GAGCTC 1 cut(s) 723
StuI AGGCCT 2 cut(s) 560, 1140
StyD4I CCNGG 9 cut(s) 187, 188, 616, 814, 884, 1089, 1179, 1268, 1618
StyI CCWWGG 2 cut(s) 1141, 1492
TaaI ACNGT 5 cut(s) 172, 635, 928, 1135, 1567
TaiI ACGT 2 cut(s) 897, 1224
TaqI TCGA 4 cut(s) 196, 283, 292, 1545
TasI AATT 6 cut(s) 198, 801, 1011, 1085, 1474, 1537
TatI WGTACW 2 cut(s) 360, 627
TfiI GAWTC 1 cut(s) 950
Tru1I TTAA 7 cut(s) 231, 240, 552, 1005, 1326, 1395, 1750
Tru9I TTAA 7 cut(s) 231, 240, 552, 1005, 1326, 1395, 1750
TscAI CASTG 4 cut(s) 931, 1218, 1249, 1320
TseFI GTSAC 3 cut(s) 136, 322, 895
TseI GCWGC 2 cut(s) 704, 1205
Tsp45I GTSAC 3 cut(s) 136, 322, 895
TspDTI ATGAA 5 cut(s) 9, 405, 865, 1001, 1448
TspGWI ACGGA 1 cut(s) 1055
TspMI CCCGGG 1 cut(s) 188
TspRI CASTG 4 cut(s) 931, 1218, 1249, 1320
VpaK11BI GGWCC 2 cut(s) 1184, 1522
XceI RCATGY 2 cut(s) 407, 1749
XcmI CCANNNNNNNNNTGG 1 cut(s) 1187
XmaI CCCGGG 1 cut(s) 188
XmiI GTMKAC 2 cut(s) 759, 1545
XspI CTAG 6 cut(s) 207, 905, 1379, 1401, 1607, 1659
Zsp2I ATGCAT 2 cut(s) 652, 1638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.