FvH4_6g18610

Cell division protein ftsZ

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
12288184 .. 12293018
4835 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g18610.t4

Sequence Viewer

Length: 1440 bp
ATGGCGACATATGCATCGACACATTTTACTTTTTCGGATACTCGGAACCCGGTTGGGGTTCTAACTAGAGTTGGAGGGAGATTGTTAGTGGGGAATCACTTCGAAAGAGTTAGAAGTGTGAGAATGCTGCCTGAGGGGAAGTTTGGGTTTGTGGGTGCAGTCCATAAGTTGAATTTGAATCAATTCAAAAACTCTCACAGTGTGGGTTCGTATCCGAATAAAGACCCTTTTCTGAATCTACACCCGGAAGTGTCTATGCTCAGAGGTGAGGGGAATAATACGTCAAGCAATCTGAGGAAAGATACTCCAGGTGGGAGTGTGACTGAGAGCTTGAGTGACAAATCTTCTCCGAATAATTACAATGAAGCAAAAATTAAAGTTATTGGTGTTGGTGGTGGAGGGTCAAATGCAGTCAATCGTATGATTGAGAGTGCAATGAAGGGTGTGGAGTTCTGGATTGTTAACACCGATGTTCAAGCCATGAGAATGTCGCCTGTTTTTCCTGAGAACCGTTTACAAATTGGTCAAGAGCTTACCAGGGGTCTTGGAGCTGGTGGAAACCCGGATGTTGGTATGAATGCTGCCAAAGAAAGTCGAGAATCAATAGAAGAAGCATTATTTGGGTCAGACATGGTTTTCGTTACGGCTGGAATGGGTGGAGGAACTGGAACTGGTGGAGCTCCTGTAGTTGCAGGTGTTGCAAAATCAATGGGGATCCTGACGGTTGGTGTTGTGACAACTCCTTTCTCTTTTGAGGGACGAAAACGGGCGGTTCAAGCTCAGGAAGGGATTGCAGCTTTGAGAGAGAATGTCGACACACTGATAGTCATTCCAAATGACAAGTTGTTGACTGCAGTTTCCCAGTCTACTCCAGTAACAGAGGCATTTAATTTAGCTGATGATATTCTTCGACAAGGTGTTCGTGGTATCTCTGATATAATTACGATTCCCGGGCTGGTAAACGTCGACTTTGCTGATGTAAGGGCTATAATGGCAAATGCAGGTTCGTCATTGATGGGGATAGGAACTGCAACTGGGAAGACAAGGGCTAGGGATGCTGCATTAAATGCCATTCAATCACCTTTATTAGATATTGGTATAGAGAGGGCAACTGGAATTGTGTGGAACATAACTGGTGGAACTGATTTGACACTCTATGAGGTCAATGCTGCCGCAGAGGTTATATATGATCTTGTAGATCCAACAGCAAATCTAATATTTGGAGCAGTGACAGATCCATCACTCACTGGTCAAGTTAGTATCACTCTAATTGCTACTGGTTTCAAACGCCAAGAGGAAAGTGATGGGAGGCCACTCCAGGCACAAGGAGATGTTACTCTTGGAATCAATCGAAGACCTTCCTCCTTCACAGAGGGCAGTGCAGTTGAGATTCCTGATTTCTTGAAGAAGAAAGGTCGCTCACGTTATCCAAGAGTTTAA

Protein Analysis

480

Amino Acids

50.71

Weight (kDa)

6.57

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tubulin PF00091 124 - 285 5.3e-47 Tubulin/FtsZ family, GTPase domain
FtsZ_C PF12327 335 - 429 2e-29 FtsZ family, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000552)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36250 AT2G36250 AT2G36250 AT2G36250 AT3G52750 AT3G52750 AT3G52750 AT3G52750
fragaria_vesca FvH4_6g18610 FvH4_6g18610 FvH4_6g18610 FvH4_6g18610
malus_domestica MD12G1035600.v1.1 MD14G1022400.v1.1
prunus_persica Prupe.7G110900_v2.0.a1 Prupe.7G110900_v2.0.a1
pyrus_communis pycom12g02340 pycom14g02140
rosa_chinensis RchiOBHm_Chr3g0473191 RchiOBHm_Chr3g0473221 RchiOBHm_Chr3g0473231 RchiOBHm_Chr3g0473301 RchiOBHm_Chr3g0473311 RchiOBHm_Chr3g0473351 RchiOBHm_Chr3g0473401 RchiOBHm_Chr3g0473491 RchiOBHm_Chr3g0473541 RchiOBHm_Chr5g0044451 RchiOBHm_Chr7g0190991
rosa_laevigata RLG00000019977 RLG00000024009 RLG00000024012 RLG00000024015 RLG00000024018 RLG00000024019 RLG00000024021 RLG00000030788
rosa_multiflora Rmu_sc0000327.1_g000039 Rmu_sc0002075.1_g000002 Rmu_sc0003069.1_g000018 Rmu_sc0003069.1_g000050 Rmu_sc0003069.1_g000058 Rmu_sc0006792.1_g000029 Rmu_sc0011598.1_g000001 Rmu_sc0016164.1_g000018
rosa_roxburghii Rroxscaffold_2G00102410 Rroxscaffold_2G00102420 Rroxscaffold_4G00324300 Rroxscaffold_6G00408060 Rroxscaffold_6G00408100 Rroxscaffold_6G00408130 Rroxscaffold_6G00408200 Rroxscaffold_6G00408220 Rroxscaffold_6G00408230
rosa_rugosa Rorug03G0132100 Rorug03G0132500 Rorug03G0132600 Rorug03G0132900 Rorug05G0214500 Rorug06G0144900
rosa_samantha Rh3AG183800 Rh3AG184500 Rh3BG210300 Rh3BG210500 Rh3BG210800 Rh3BG211200 Rh3BG211600 Rh3BG211800 Rh3BG212000 Rh3BG212200 Rh3BG212400 Rh3BG212500 Rh3CG207400 Rh3CG207500 Rh3CG207700 Rh3CG209100 Rh3DG207400 Rh3DG208500 Rh5BG305900 Rh5DG315200
rosa_wichuraiana Rw0G008130 Rw0G008180 Rw0G014760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 683
Acc36I ACCTGC 2 cut(s) 683, 992
AccI GTMKAC 3 cut(s) 813, 866, 966
AciI CCGC 2 cut(s) 770, 1173
AclWI GGATC 4 cut(s) 709, 722, 1193, 1229
AcsI RAATTY 1 cut(s) 172
AdeI CACNNNGTG 1 cut(s) 202
AfiI CCNNNNNNNGG 2 cut(s) 55, 569
AgsI TTSAA 8 cut(s) 172, 178, 187, 476, 776, 1076, 1285, 1405
AjnI CCWGG 3 cut(s) 307, 536, 1317
AjuI GAANNNNNNNTTGG 2 cut(s) 603, 635
AluBI AGCT 7 cut(s) 330, 532, 551, 680, 779, 797, 896
AluI AGCT 7 cut(s) 330, 532, 551, 680, 779, 797, 896
Alw21I GWGCWC 1 cut(s) 682
AlwI GGATC 4 cut(s) 709, 722, 1193, 1229
Ama87I CYCGRG 1 cut(s) 950
AoxI GGCC 1 cut(s) 1310
ApeKI GCWGC 5 cut(s) 127, 581, 794, 1058, 1169
ApoI RAATTY 1 cut(s) 172
ArsI GACNNNNNNTTYG 4 cut(s) 620, 652, 903, 935
Asp700I GAANNNNTTC 3 cut(s) 98, 182, 1357
AsuC2I CCSGG 5 cut(s) 50, 245, 563, 951, 952
AsuHPI GGTGA 2 cut(s) 278, 1071
AsuII TTCGAA 1 cut(s) 102
AvaI CYCGRG 1 cut(s) 950
AxyI CCTNAGG 1 cut(s) 132
BamHI GGATCC 1 cut(s) 714
BanII GRGCYC 1 cut(s) 682
BbsI GAAGAC 2 cut(s) 1046, 1360
Bbv12I GWGCWC 1 cut(s) 682
BbvI GCAGC 5 cut(s) 114, 568, 806, 1045, 1156
BccI CCATC 3 cut(s) 1009, 1246, 1298
BceAI ACGGC 1 cut(s) 660
BciT130I CCWGG 3 cut(s) 309, 538, 1319
BciVI GTATCC 2 cut(s) 31, 222
BcnI CCSGG 5 cut(s) 50, 245, 563, 951, 952
BfaI CTAG 2 cut(s) 66, 1050
BfmI CTRYAG 2 cut(s) 684, 852
BfuAI ACCTGC 2 cut(s) 683, 992
BfuI GTATCC 2 cut(s) 31, 222
BisI GCNGC 6 cut(s) 128, 582, 795, 1059, 1170, 1173
BlsI GCNGC 6 cut(s) 129, 583, 796, 1060, 1171, 1174
Bme1390I CCNGG 8 cut(s) 50, 245, 309, 538, 563, 951, 952, 1319
BmeT110I CYCGRG 1 cut(s) 950
BmiI GGNNCC 2 cut(s) 47, 716
BmrFI CCNGG 8 cut(s) 50, 245, 309, 538, 563, 951, 952, 1319
BmrI ACTGGG 2 cut(s) 856, 1044
BmsI GCATC 2 cut(s) 23, 1045
BmuI ACTGGG 2 cut(s) 856, 1044
BpiI GAAGAC 2 cut(s) 1046, 1360
BpmI CTGGAG 3 cut(s) 291, 855, 1301
Bpu10I CCTNAGC 1 cut(s) 780
Bpu14I TTCGAA 1 cut(s) 102
BpuEI CTTGAG 1 cut(s) 352
BpuMI CCSGG 5 cut(s) 50, 245, 563, 951, 952
BsaJI CCNNGG 2 cut(s) 537, 950
BsaXI ACNNNNNCTCC 2 cut(s) 669, 699
Bsc4I CCNNNNNNNGG 2 cut(s) 55, 569
Bse1I ACTGG 9 cut(s) 670, 676, 862, 872, 1039, 1117, 1138, 1252, 1282
Bse21I CCTNAGG 1 cut(s) 132
Bse3DI GCAATG 1 cut(s) 441
BseBI CCWGG 3 cut(s) 309, 538, 1319
BseDI CCNNGG 2 cut(s) 537, 950
BseGI GGATG 2 cut(s) 571, 1060
BseLI CCNNNNNNNGG 2 cut(s) 55, 569
BseMI GCAATG 1 cut(s) 441
BseMII CTCAG 6 cut(s) 123, 274, 284, 315, 495, 794
BseNI ACTGG 9 cut(s) 670, 676, 862, 872, 1039, 1117, 1138, 1252, 1282
BseXI GCAGC 5 cut(s) 114, 568, 806, 1045, 1156
BsgI GTGCAG 2 cut(s) 177, 1401
BshFI GGCC 1 cut(s) 1312
BsiHKAI GWGCWC 1 cut(s) 682
BsiHKCI CYCGRG 1 cut(s) 950
BsiSI CCGG 4 cut(s) 50, 245, 563, 951
BslFI GGGAC 1 cut(s) 771
BslI CCNNNNNNNGG 2 cut(s) 55, 569
BsmFI GGGAC 1 cut(s) 771
BsmI GAATGC 2 cut(s) 129, 583
BsnI GGCC 1 cut(s) 1312
BsoBI CYCGRG 1 cut(s) 950
Bsp119I TTCGAA 1 cut(s) 102
Bsp1286I GDGCHC 1 cut(s) 682
Bsp143I GATC 4 cut(s) 714, 1189, 1198, 1234
BspACI CCGC 2 cut(s) 770, 1173
BspANI GGCC 1 cut(s) 1312
BspCNI CTCAG 6 cut(s) 124, 273, 285, 316, 496, 793
BspLI GGNNCC 2 cut(s) 47, 716
BspMAI CTGCAG 1 cut(s) 856
BspMI ACCTGC 2 cut(s) 683, 992
BspPI GGATC 4 cut(s) 709, 722, 1193, 1229
BspT104I TTCGAA 1 cut(s) 102
BsrDI GCAATG 1 cut(s) 441
BsrI ACTGG 9 cut(s) 670, 676, 862, 872, 1039, 1117, 1138, 1252, 1282
BssECI CCNNGG 2 cut(s) 537, 950
BssMI GATC 4 cut(s) 714, 1189, 1198, 1234
Bst2UI CCWGG 3 cut(s) 309, 538, 1319
Bst4CI ACNGT 3 cut(s) 200, 512, 724
BstAPI GCANNNNNTGC 2 cut(s) 698, 1067
BstBI TTCGAA 1 cut(s) 102
BstDEI CTNAG 6 cut(s) 132, 260, 293, 324, 504, 780
BstF5I GGATG 2 cut(s) 571, 1060
BstKTI GATC 4 cut(s) 717, 1192, 1201, 1237
BstMBI GATC 4 cut(s) 714, 1189, 1198, 1234
BstMWI GCNNNNNNNGC 6 cut(s) 11, 698, 776, 992, 1055, 1067
BstNI CCWGG 3 cut(s) 309, 538, 1319
BstSCI CCNGG 8 cut(s) 48, 243, 307, 536, 561, 949, 950, 1317
BstSFI CTRYAG 2 cut(s) 684, 852
BstV1I GCAGC 5 cut(s) 114, 568, 806, 1045, 1156
BstV2I GAAGAC 2 cut(s) 1046, 1360
BstX2I RGATCY 3 cut(s) 714, 1198, 1234
BstYI RGATCY 3 cut(s) 714, 1198, 1234
Bsu36I CCTNAGG 1 cut(s) 132
BsuI GTATCC 2 cut(s) 31, 222
BsuRI GGCC 1 cut(s) 1312
BtsCI GGATG 2 cut(s) 571, 1060
BtsI GCAGTG 2 cut(s) 1233, 1384
BtsIMutI CAGTG 5 cut(s) 205, 818, 1233, 1245, 1384
BveI ACCTGC 2 cut(s) 683, 992
Cfr9I CCCGGG 1 cut(s) 950
CviAII CATG 2 cut(s) 481, 631
DdeI CTNAG 6 cut(s) 132, 260, 293, 324, 504, 780
DpnI GATC 4 cut(s) 716, 1191, 1200, 1236
DpnII GATC 4 cut(s) 714, 1189, 1198, 1234
DraIII CACNNNGTG 1 cut(s) 202
Ecl136II GAGCTC 1 cut(s) 680
Eco24I GRGCYC 1 cut(s) 682
Eco53kI GAGCTC 1 cut(s) 680
Eco81I CCTNAGG 1 cut(s) 132
Eco88I CYCGRG 1 cut(s) 950
EcoICRI GAGCTC 1 cut(s) 680
EcoRII CCWGG 3 cut(s) 307, 536, 1317
EcoT22I ATGCAT 1 cut(s) 16
EcoT38I GRGCYC 1 cut(s) 682
FaeI CATG 2 cut(s) 484, 634
FaqI GGGAC 1 cut(s) 771
FatI CATG 2 cut(s) 480, 630
FauNDI CATATG 1 cut(s) 10
FblI GTMKAC 3 cut(s) 813, 866, 966
Fnu4HI GCNGC 6 cut(s) 128, 582, 795, 1059, 1170, 1173
FokI GGATG 2 cut(s) 578, 1067
FriOI GRGCYC 1 cut(s) 682
Fsp4HI GCNGC 6 cut(s) 128, 582, 795, 1059, 1170, 1173
FspBI CTAG 2 cut(s) 66, 1050
GluI GCNGC 6 cut(s) 128, 582, 795, 1059, 1170, 1173
GsuI CTGGAG 3 cut(s) 291, 855, 1301
HaeIII GGCC 1 cut(s) 1312
HapII CCGG 4 cut(s) 50, 245, 563, 951
Hin1II CATG 2 cut(s) 484, 634
HincII GTYRAC 4 cut(s) 463, 814, 849, 967
HindII GTYRAC 4 cut(s) 463, 814, 849, 967
HinfI GANTC 7 cut(s) 94, 178, 235, 599, 946, 1344, 1390
HpaI GTTAAC 1 cut(s) 463
HpaII CCGG 4 cut(s) 50, 245, 563, 951
HphI GGTGA 2 cut(s) 278, 1071
Hpy166II GTNNAC 7 cut(s) 463, 515, 814, 849, 867, 961, 967
Hpy188I TCNGA 9 cut(s) 37, 45, 216, 234, 263, 294, 351, 628, 934
Hpy188III TCNNGA 8 cut(s) 454, 503, 527, 596, 718, 782, 1394, 1402
Hpy8I GTNNAC 7 cut(s) 463, 515, 814, 849, 867, 961, 967
Hpy99I CGWCG 1 cut(s) 968
HpyAV CCTTC 4 cut(s) 433, 779, 1368, 1375
HpyCH4III ACNGT 3 cut(s) 200, 512, 724
HpyCH4IV ACGT 3 cut(s) 281, 963, 1423
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 698, 776, 992, 1055, 1067
HpyF3I CTNAG 6 cut(s) 132, 260, 293, 324, 504, 780
HpySE526I ACGT 3 cut(s) 281, 963, 1423
Hsp92II CATG 2 cut(s) 484, 634
KspAI GTTAAC 1 cut(s) 463
Kzo9I GATC 4 cut(s) 714, 1189, 1198, 1234
LmnI GCTCC 4 cut(s) 548, 677, 685, 1223
Lsp1109I GCAGC 5 cut(s) 114, 568, 806, 1045, 1156
LweI GCATC 2 cut(s) 23, 1045
MaeI CTAG 2 cut(s) 66, 1050
MaeII ACGT 3 cut(s) 281, 963, 1423
MaeIII GTNAC 7 cut(s) 319, 335, 640, 733, 874, 1228, 1333
MalI GATC 4 cut(s) 716, 1191, 1200, 1236
MboI GATC 4 cut(s) 714, 1189, 1198, 1234
MboII GAAGA 7 cut(s) 336, 620, 899, 1051, 1365, 1417, 1420
MflI RGATCY 3 cut(s) 714, 1198, 1234
MhlI GDGCHC 1 cut(s) 682
MluCI AATT 9 cut(s) 172, 182, 355, 372, 519, 889, 939, 1116, 1269
MmeI TCCRAC 2 cut(s) 52, 1226
Mph1103I ATGCAT 1 cut(s) 16
MroXI GAANNNNTTC 3 cut(s) 98, 182, 1357
MseI TTAA 5 cut(s) 375, 462, 888, 1064, 1438
MslI CAYNNNNRTG 1 cut(s) 485
MspI CCGG 4 cut(s) 50, 245, 563, 951
MspR9I CCNGG 8 cut(s) 50, 245, 309, 538, 563, 951, 952, 1319
Mva1269I GAATGC 2 cut(s) 129, 583
MvaI CCWGG 3 cut(s) 309, 538, 1319
MwoI GCNNNNNNNGC 6 cut(s) 11, 698, 776, 992, 1055, 1067
NciI CCSGG 5 cut(s) 50, 245, 563, 951, 952
NdeI CATATG 1 cut(s) 10
NdeII GATC 4 cut(s) 714, 1189, 1198, 1234
NlaIII CATG 2 cut(s) 484, 634
NlaIV GGNNCC 2 cut(s) 47, 716
NmuCI GTSAC 4 cut(s) 319, 335, 733, 1228
NsiI ATGCAT 1 cut(s) 16
NspV TTCGAA 1 cut(s) 102
PaqCI CACCTGC 1 cut(s) 683
PctI GAATGC 2 cut(s) 129, 583
PdmI GAANNNNTTC 3 cut(s) 98, 182, 1357
PfeI GAWTC 7 cut(s) 94, 178, 235, 599, 946, 1344, 1390
PkrI GCNGC 6 cut(s) 129, 583, 796, 1060, 1171, 1174
Psp124BI GAGCTC 1 cut(s) 682
Psp6I CCWGG 3 cut(s) 307, 536, 1317
PspGI CCWGG 3 cut(s) 307, 536, 1317
PspN4I GGNNCC 2 cut(s) 47, 716
PstI CTGCAG 1 cut(s) 856
PsuI RGATCY 3 cut(s) 714, 1198, 1234
RseI CAYNNNNRTG 1 cut(s) 485
SacI GAGCTC 1 cut(s) 682
SalI GTCGAC 2 cut(s) 812, 965
SaqAI TTAA 5 cut(s) 375, 462, 888, 1064, 1438
SatI GCNGC 6 cut(s) 128, 582, 795, 1059, 1170, 1173
Sau3AI GATC 4 cut(s) 714, 1189, 1198, 1234
ScrFI CCNGG 8 cut(s) 50, 245, 309, 538, 563, 951, 952, 1319
SduI GDGCHC 1 cut(s) 682
SfaNI GCATC 2 cut(s) 23, 1045
SfcI CTRYAG 2 cut(s) 684, 852
SfuI TTCGAA 1 cut(s) 102
SmaI CCCGGG 1 cut(s) 952
SmiMI CAYNNNNRTG 1 cut(s) 485
SmlI CTYRAG 1 cut(s) 331
SmoI CTYRAG 1 cut(s) 331
Sse9I AATT 9 cut(s) 172, 182, 355, 372, 519, 889, 939, 1116, 1269
SsiI CCGC 2 cut(s) 770, 1173
SspI AATATT 1 cut(s) 1218
SspMI CTAG 2 cut(s) 66, 1050
SstI GAGCTC 1 cut(s) 682
StyD4I CCNGG 8 cut(s) 48, 243, 307, 536, 561, 949, 950, 1317
TaaI ACNGT 3 cut(s) 200, 512, 724
TaiI ACGT 3 cut(s) 284, 966, 1426
TaqI TCGA 7 cut(s) 17, 102, 595, 813, 910, 966, 1351
TasI AATT 9 cut(s) 172, 182, 355, 372, 519, 889, 939, 1116, 1269
TauI GCSGC 1 cut(s) 1175
TfiI GAWTC 7 cut(s) 94, 178, 235, 599, 946, 1344, 1390
Tru1I TTAA 5 cut(s) 375, 462, 888, 1064, 1438
Tru9I TTAA 5 cut(s) 375, 462, 888, 1064, 1438
TscAI CASTG 5 cut(s) 205, 825, 1233, 1252, 1384
TseFI GTSAC 4 cut(s) 319, 335, 733, 1228
TseI GCWGC 5 cut(s) 127, 581, 794, 1058, 1169
Tsp45I GTSAC 4 cut(s) 319, 335, 733, 1228
TspDTI ATGAA 3 cut(s) 378, 452, 590
TspMI CCCGGG 1 cut(s) 950
TspRI CASTG 5 cut(s) 205, 825, 1233, 1252, 1384
XapI RAATTY 1 cut(s) 172
XmaI CCCGGG 1 cut(s) 950
XmiI GTMKAC 3 cut(s) 813, 866, 966
XmnI GAANNNNTTC 3 cut(s) 98, 182, 1357
XspI CTAG 2 cut(s) 66, 1050
Zsp2I ATGCAT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.