Rmu_sc0002075.1_g000002

Cell division protein ftsZ

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002075.1
Physical Location & Seq
Reverse (-)
1998 .. 4971
2974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002075.1_g000002.1.cds

Sequence Viewer

Length: 723 bp
atggagtcttatggcaagtcactcaagttattgactgcagtttcccagtctaccccagtaacagaggcatttaatctggctaacgatattctaccacaaggtgttcgtggtgtctccgatataatcacgattctggggctggcaaatgtcgactttgctgatgtaagggctataatggtgaatgcgggttcttcattgatggggataggaactgcaactgggaagacaagggcaagagatgctgctttaaatgccattcaatcatctttattagatattgttatagagagggctactggaattgtctggaacataactggtggaactgatttgacacactatgaggtaaatgctgcagcagaggttatatatgatcttgttgatccaacagcaaatttaatatttggagcagtgacagatccatcactcagtggtcaagttagcatcactctaattgctactggattcaaacgccaagaagaaagtgatgggaggccactccaggcacaagtagatattacccttggaatcaatcgaagaccttcctccttgtcagaaggtagttcagtcgagattcccgatttcttgaagaagaaaaggatgctcacgttatccagtttgaaatgcttcctttttattccaatgagtgccttgtctgaggcctcccagcctcttcattaccacatcagcatcaatctgagggatttaagtatgcctctgtag

Protein Analysis

240

Amino Acids

25.65

Weight (kDa)

5.2

Isoelectric Point (pI)

44.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000552)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36250 AT2G36250 AT2G36250 AT2G36250 AT3G52750 AT3G52750 AT3G52750 AT3G52750
fragaria_vesca FvH4_6g18610 FvH4_6g18610 FvH4_6g18610 FvH4_6g18610
malus_domestica MD12G1035600.v1.1 MD14G1022400.v1.1
prunus_persica Prupe.7G110900_v2.0.a1 Prupe.7G110900_v2.0.a1
pyrus_communis pycom12g02340 pycom14g02140
rosa_chinensis RchiOBHm_Chr3g0473191 RchiOBHm_Chr3g0473221 RchiOBHm_Chr3g0473231 RchiOBHm_Chr3g0473301 RchiOBHm_Chr3g0473311 RchiOBHm_Chr3g0473351 RchiOBHm_Chr3g0473401 RchiOBHm_Chr3g0473491 RchiOBHm_Chr3g0473541 RchiOBHm_Chr5g0044451 RchiOBHm_Chr7g0190991
rosa_laevigata RLG00000019977 RLG00000024009 RLG00000024012 RLG00000024015 RLG00000024018 RLG00000024019 RLG00000024021 RLG00000030788
rosa_multiflora Rmu_sc0000327.1_g000039 Rmu_sc0002075.1_g000002 Rmu_sc0003069.1_g000018 Rmu_sc0003069.1_g000050 Rmu_sc0003069.1_g000058 Rmu_sc0006792.1_g000029 Rmu_sc0011598.1_g000001 Rmu_sc0016164.1_g000018
rosa_roxburghii Rroxscaffold_2G00102410 Rroxscaffold_2G00102420 Rroxscaffold_4G00324300 Rroxscaffold_6G00408060 Rroxscaffold_6G00408100 Rroxscaffold_6G00408130 Rroxscaffold_6G00408200 Rroxscaffold_6G00408220 Rroxscaffold_6G00408230
rosa_rugosa Rorug03G0132100 Rorug03G0132500 Rorug03G0132600 Rorug03G0132900 Rorug05G0214500 Rorug06G0144900
rosa_samantha Rh3AG183800 Rh3AG184500 Rh3BG210300 Rh3BG210500 Rh3BG210800 Rh3BG211200 Rh3BG211600 Rh3BG211800 Rh3BG212000 Rh3BG212200 Rh3BG212400 Rh3BG212500 Rh3CG207400 Rh3CG207500 Rh3CG207700 Rh3CG209100 Rh3DG207400 Rh3DG208500 Rh5BG305900 Rh5DG315200
rosa_wichuraiana Rw0G008130 Rw0G008180 Rw0G014760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 50, 150
AciI CCGC 1 cut(s) 185
AclWI GGATC 2 cut(s) 377, 413
AcsI RAATTY 1 cut(s) 394
AdeI CACNNNGTG 2 cut(s) 101, 431
AgsI TTSAA 4 cut(s) 260, 469, 589, 622
AjnI CCWGG 1 cut(s) 501
Alw26I GTCTC 1 cut(s) 118
AlwI GGATC 2 cut(s) 377, 413
AoxI GGCC 2 cut(s) 494, 660
ApeKI GCWGC 3 cut(s) 242, 353, 356
ApoI RAATTY 1 cut(s) 394
Asp700I GAANNNNTTC 2 cut(s) 541, 626
AsuHPI GGTGA 1 cut(s) 190
BbsI GAAGAC 2 cut(s) 230, 544
BbvI GCAGC 3 cut(s) 229, 340, 368
BccI CCATC 3 cut(s) 193, 430, 482
BciT130I CCWGG 1 cut(s) 503
BcoDI GTCTC 1 cut(s) 118
BfmI CTRYAG 3 cut(s) 36, 354, 719
BisI GCNGC 3 cut(s) 243, 354, 357
BlsI GCNGC 3 cut(s) 244, 355, 358
Bme1390I CCNGG 1 cut(s) 503
BmrFI CCNGG 1 cut(s) 503
BmrI ACTGGG 3 cut(s) 40, 50, 228
BmsI GCATC 4 cut(s) 229, 453, 591, 699
BmuI ACTGGG 3 cut(s) 40, 50, 228
BpiI GAAGAC 2 cut(s) 230, 544
BpmI CTGGAG 1 cut(s) 485
BpuEI CTTGAG 1 cut(s) 8
BsaJI CCNNGG 1 cut(s) 523
Bse1I ACTGG 7 cut(s) 46, 56, 223, 301, 322, 466, 615
BseBI CCWGG 1 cut(s) 503
BseDI CCNNGG 1 cut(s) 523
BseGI GGATG 1 cut(s) 606
BseMII CTCAG 3 cut(s) 442, 648, 689
BseNI ACTGG 7 cut(s) 46, 56, 223, 301, 322, 466, 615
BseXI GCAGC 3 cut(s) 229, 340, 368
BseYI CCCAGC 1 cut(s) 666
BshFI GGCC 2 cut(s) 496, 662
BsmAI GTCTC 1 cut(s) 118
BsmI GAATGC 1 cut(s) 187
BsnI GGCC 2 cut(s) 496, 662
Bsp143I GATC 3 cut(s) 373, 382, 418
BspACI CCGC 1 cut(s) 185
BspANI GGCC 2 cut(s) 496, 662
BspCNI CTCAG 3 cut(s) 441, 649, 690
BspMAI CTGCAG 2 cut(s) 40, 358
BspPI GGATC 2 cut(s) 377, 413
BsrI ACTGG 7 cut(s) 46, 56, 223, 301, 322, 466, 615
BssECI CCNNGG 1 cut(s) 523
BssMI GATC 3 cut(s) 373, 382, 418
BssT1I CCWWGG 1 cut(s) 523
Bst2UI CCWGG 1 cut(s) 503
Bst6I CTCTTC 1 cut(s) 678
BstAPI GCANNNNNTGC 1 cut(s) 239
BstC8I GCNNGC 1 cut(s) 141
BstDEI CTNAG 3 cut(s) 428, 657, 698
BstF5I GGATG 1 cut(s) 606
BstKTI GATC 3 cut(s) 376, 385, 421
BstMAI GTCTC 1 cut(s) 118
BstMBI GATC 3 cut(s) 373, 382, 418
BstMWI GCNNNNNNNGC 2 cut(s) 239, 251
BstNI CCWGG 1 cut(s) 503
BstSCI CCNGG 1 cut(s) 501
BstSFI CTRYAG 3 cut(s) 36, 354, 719
BstV1I GCAGC 3 cut(s) 229, 340, 368
BstV2I GAAGAC 2 cut(s) 230, 544
BstX2I RGATCY 1 cut(s) 418
BstYI RGATCY 1 cut(s) 418
BsuRI GGCC 2 cut(s) 496, 662
BtsCI GGATG 1 cut(s) 606
BtsI GCAGTG 1 cut(s) 417
BtsIMutI CAGTG 2 cut(s) 417, 436
Cac8I GCNNGC 1 cut(s) 141
CviJI RGCY 7 cut(s) 80, 139, 170, 293, 496, 662, 670
CviKI_1 RGCY 7 cut(s) 80, 139, 170, 293, 496, 662, 670
DdeI CTNAG 3 cut(s) 428, 657, 698
DpnI GATC 3 cut(s) 375, 384, 420
DpnII GATC 3 cut(s) 373, 382, 418
DraI TTTAAA 1 cut(s) 249
DraIII CACNNNGTG 2 cut(s) 101, 431
Eam1104I CTCTTC 1 cut(s) 678
EarI CTCTTC 1 cut(s) 678
Eco130I CCWWGG 1 cut(s) 523
Eco147I AGGCCT 1 cut(s) 662
EcoRII CCWGG 1 cut(s) 501
EcoT14I CCWWGG 1 cut(s) 523
ErhI CCWWGG 1 cut(s) 523
FauI CCCGC 1 cut(s) 178
FblI GTMKAC 2 cut(s) 50, 150
Fnu4HI GCNGC 3 cut(s) 243, 354, 357
FokI GGATG 1 cut(s) 613
Fsp4HI GCNGC 3 cut(s) 243, 354, 357
GluI GCNGC 3 cut(s) 243, 354, 357
GsaI CCCAGC 1 cut(s) 670
GsuI CTGGAG 1 cut(s) 485
HaeIII GGCC 2 cut(s) 496, 662
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HinfI GANTC 5 cut(s) 5, 130, 465, 528, 574
HphI GGTGA 1 cut(s) 190
Hpy166II GTNNAC 2 cut(s) 51, 151
Hpy188I TCNGA 4 cut(s) 118, 556, 658, 699
Hpy188III TCNNGA 5 cut(s) 127, 307, 571, 578, 586
Hpy8I GTNNAC 2 cut(s) 51, 151
HpyAV CCTTC 2 cut(s) 551, 552
HpyCH4IV ACGT 1 cut(s) 608
HpyCH4V TGCA 3 cut(s) 38, 215, 356
HpyF10VI GCNNNNNNNGC 2 cut(s) 239, 251
HpyF3I CTNAG 3 cut(s) 428, 657, 698
HpySE526I ACGT 1 cut(s) 608
Kzo9I GATC 3 cut(s) 373, 382, 418
LmnI GCTCC 1 cut(s) 407
Lsp1109I GCAGC 3 cut(s) 229, 340, 368
LweI GCATC 4 cut(s) 229, 453, 591, 699
MaeII ACGT 1 cut(s) 608
MaeIII GTNAC 3 cut(s) 18, 58, 412
MalI GATC 3 cut(s) 375, 384, 420
MboI GATC 3 cut(s) 373, 382, 418
MboII GAAGA 7 cut(s) 183, 235, 491, 549, 601, 604, 665
MflI RGATCY 1 cut(s) 418
MluCI AATT 3 cut(s) 300, 394, 453
MlyI GAGTC 1 cut(s) 14
MmeI TCCRAC 1 cut(s) 410
MroXI GAANNNNTTC 2 cut(s) 541, 626
MseI TTAA 4 cut(s) 72, 248, 398, 707
MspR9I CCNGG 1 cut(s) 503
Mva1269I GAATGC 1 cut(s) 187
MvaI CCWGG 1 cut(s) 503
MwoI GCNNNNNNNGC 2 cut(s) 239, 251
NdeII GATC 3 cut(s) 373, 382, 418
NmuCI GTSAC 2 cut(s) 18, 412
PceI AGGCCT 1 cut(s) 662
PcsI WCGNNNNNNNCGW 1 cut(s) 576
PctI GAATGC 1 cut(s) 187
PdmI GAANNNNTTC 2 cut(s) 541, 626
PfeI GAWTC 4 cut(s) 130, 465, 528, 574
PkrI GCNGC 3 cut(s) 244, 355, 358
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
Psp6I CCWGG 1 cut(s) 501
PspFI CCCAGC 1 cut(s) 666
PspGI CCWGG 1 cut(s) 501
PstI CTGCAG 2 cut(s) 40, 358
PsuI RGATCY 1 cut(s) 418
SalI GTCGAC 1 cut(s) 149
SaqAI TTAA 4 cut(s) 72, 248, 398, 707
SatI GCNGC 3 cut(s) 243, 354, 357
Sau3AI GATC 3 cut(s) 373, 382, 418
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 1 cut(s) 503
SetI ASST 6 cut(s) 103, 348, 366, 544, 562, 611
SfaNI GCATC 4 cut(s) 229, 453, 591, 699
SfcI CTRYAG 3 cut(s) 36, 354, 719
SmlI CTYRAG 1 cut(s) 23
SmoI CTYRAG 1 cut(s) 23
Sse9I AATT 3 cut(s) 300, 394, 453
SseBI AGGCCT 1 cut(s) 662
SsiI CCGC 1 cut(s) 185
SspI AATATT 1 cut(s) 402
StuI AGGCCT 1 cut(s) 662
StyD4I CCNGG 1 cut(s) 501
StyI CCWWGG 1 cut(s) 523
TaiI ACGT 1 cut(s) 611
TaqI TCGA 3 cut(s) 150, 535, 570
TasI AATT 3 cut(s) 300, 394, 453
TfiI GAWTC 4 cut(s) 130, 465, 528, 574
Tru1I TTAA 4 cut(s) 72, 248, 398, 707
Tru9I TTAA 4 cut(s) 72, 248, 398, 707
TscAI CASTG 2 cut(s) 417, 436
TseFI GTSAC 2 cut(s) 18, 412
TseI GCWGC 3 cut(s) 242, 353, 356
Tsp45I GTSAC 2 cut(s) 18, 412
TspDTI ATGAA 2 cut(s) 183, 665
TspRI CASTG 2 cut(s) 417, 436
XapI RAATTY 1 cut(s) 394
XmiI GTMKAC 2 cut(s) 50, 150
XmnI GAANNNNTTC 2 cut(s) 541, 626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.