RchiOBHm_Chr3g0473191

Cell division protein ftsZ

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
19136062 .. 19140670
4609 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43887

Sequence Viewer

Length: 1449 bp
ATGGCGACATATGCATCCACGCATTTTACTTTTTCTGATACTCGAAACCCAGTTGGGGTTCTAACGAGACTGGGAGGGAGAGTATTAGTGGAGAATCACTTGGAAAGAGTTAGAAGTGTGAAAATGCTGCCCGAGAGCAAGTTTGGATTTTTGGGTGCGATCCATAAGTCGACTTTGCCTCAATTTAAGTGCTCAGCCAGCTCTCACAGTGTGGGTTCGTATCCGAATAAAGACCCTTTTCTGAATCTACACCCTGAGGTTTCTATGCTTAGAGGTGAGGGCAATAATACGTCGAGCAATCTGAGGAAAGATACTCCAGGTGGGAATGTGACTGAGAGCTTGAGTGAGAAATCTCTTCCGAATAATTACAACGAAGCAAAGATTAAGGTTATTGGTGTTGGTGGTGGAGGGTCAAATGCAGTCAATCGCATGATTGAGAGTGCAATGAAGGGTGTGGAGTTCTGGATTGTTAACACTGATGTTCAAGCCATGAGAATGTCACCTGTCTTTCCTGAGAACCGTTTACAAATCGGTCAAGAGCTTACCAGGGGGCTTGGTGCTGGTGGAAACCCGGATGTTGGTATGAATGCTGCCAAAGAAAGCAGAGAATCGATAGAAGAAGCACTATATGGATCAGACATGGTTTTCGTTACGGCTGGAATGGGTGGAGGAACTGGCACTGGCGGAGCTCCTGTAGTTGCAGGTGTTGCAAAATCAATGGGTATATTGACGGTTGGCGTTGTGACAACTCCTTTCTCTTTTGAGGGACGAAAAAGGGCAGTTCAAGCCCAGGAAGGGATTGCAGCTTTGAGAGAGAATGTTGACACACTGATAGTCATTCCAAATGACAAGTTATTGACTGCAGTTTCCCAGTCTACCCCAGTAACAGAGGCGTTTAATCTAGCTGATGATATTCTACGACAAGGTGTTCGTGGTATCTCTGATATAATCACGATTCCTGGGCTGGTAAATGTCGACTTTGCTGATGTAAGGGCTATAATGGCGAATGCAGGTTCTTCATTGATGGGGATAGGAACTGCAACTGGGAAGACAAGGGCAAGAGATGCTGCGTTAAATGCCATTCAATCACCTCTATTAGATATCGGTATAGAGAGGGCTACTGGAATTGTCTGGAACATAACTGGTGGAACTGATTTGACACTCTATGAGGTAAATGCTGCAGCAGAGGTTATATATGACCTTGTTGATCCAACAGCAAATTTAATATTTGGAGCAGTGACAGATCCATCACTCAGTGGTCAAGTCAGCATCACTCTAATTGCTACTGGATTCAAACGCCAAGAAGAAAGTGATGGGAGGCCACTCCAGGCACAAGGAGACATTACCCTTGGAATCAATCGAAGACCTTCCTCCTTCTCAGAAGGTAGTTCAGTTGAGATTCCGGATTTCTTGAAGAAGAAAGGACGCTCACGTTATCCAAGAGTTTGA

Protein Analysis

482

Amino Acids

51.04

Weight (kDa)

6.29

Isoelectric Point (pI)

37.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tubulin PF00091 127 - 288 2.8e-47 Tubulin/FtsZ family, GTPase domain
FtsZ_C PF12327 338 - 432 1.6e-29 FtsZ family, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000552)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36250 AT2G36250 AT2G36250 AT2G36250 AT3G52750 AT3G52750 AT3G52750 AT3G52750
fragaria_vesca FvH4_6g18610 FvH4_6g18610 FvH4_6g18610 FvH4_6g18610
malus_domestica MD12G1035600.v1.1 MD14G1022400.v1.1
prunus_persica Prupe.7G110900_v2.0.a1 Prupe.7G110900_v2.0.a1
pyrus_communis pycom12g02340 pycom14g02140
rosa_chinensis RchiOBHm_Chr3g0473191 RchiOBHm_Chr3g0473221 RchiOBHm_Chr3g0473231 RchiOBHm_Chr3g0473301 RchiOBHm_Chr3g0473311 RchiOBHm_Chr3g0473351 RchiOBHm_Chr3g0473401 RchiOBHm_Chr3g0473491 RchiOBHm_Chr3g0473541 RchiOBHm_Chr5g0044451 RchiOBHm_Chr7g0190991
rosa_laevigata RLG00000019977 RLG00000024009 RLG00000024012 RLG00000024015 RLG00000024018 RLG00000024019 RLG00000024021 RLG00000030788
rosa_multiflora Rmu_sc0000327.1_g000039 Rmu_sc0002075.1_g000002 Rmu_sc0003069.1_g000018 Rmu_sc0003069.1_g000050 Rmu_sc0003069.1_g000058 Rmu_sc0006792.1_g000029 Rmu_sc0011598.1_g000001 Rmu_sc0016164.1_g000018
rosa_roxburghii Rroxscaffold_2G00102410 Rroxscaffold_2G00102420 Rroxscaffold_4G00324300 Rroxscaffold_6G00408060 Rroxscaffold_6G00408100 Rroxscaffold_6G00408130 Rroxscaffold_6G00408200 Rroxscaffold_6G00408220 Rroxscaffold_6G00408230
rosa_rugosa Rorug03G0132100 Rorug03G0132500 Rorug03G0132600 Rorug03G0132900 Rorug05G0214500 Rorug06G0144900
rosa_samantha Rh3AG183800 Rh3AG184500 Rh3BG210300 Rh3BG210500 Rh3BG210800 Rh3BG211200 Rh3BG211600 Rh3BG211800 Rh3BG212000 Rh3BG212200 Rh3BG212400 Rh3BG212500 Rh3CG207400 Rh3CG207500 Rh3CG207700 Rh3CG209100 Rh3DG207400 Rh3DG208500 Rh5BG305900 Rh5DG315200
rosa_wichuraiana Rw0G008130 Rw0G008180 Rw0G014760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 692
Acc36I ACCTGC 2 cut(s) 692, 1001
AccI GTMKAC 3 cut(s) 170, 875, 975
AccIII TCCGGA 1 cut(s) 1402
AciI CCGC 1 cut(s) 684
AclWI GGATC 4 cut(s) 154, 640, 1202, 1238
AcsI RAATTY 1 cut(s) 1219
AdeI CACNNNGTG 2 cut(s) 211, 1256
AfiI CCNNNNNNNGG 3 cut(s) 55, 578, 795
AgsI TTSAA 5 cut(s) 485, 785, 1085, 1294, 1414
AjnI CCWGG 5 cut(s) 316, 545, 789, 958, 1326
AluBI AGCT 6 cut(s) 201, 339, 541, 689, 806, 905
AluI AGCT 6 cut(s) 201, 339, 541, 689, 806, 905
Alw21I GWGCWC 2 cut(s) 194, 691
Alw26I GTCTC 2 cut(s) 61, 1332
AlwI GGATC 4 cut(s) 154, 640, 1202, 1238
Ama87I CYCGRG 1 cut(s) 131
Aor13HI TCCGGA 1 cut(s) 1402
AoxI GGCC 1 cut(s) 1319
ApeKI GCWGC 6 cut(s) 127, 590, 803, 1067, 1178, 1181
ApoI RAATTY 1 cut(s) 1219
ArsI GACNNNNNNTTYG 4 cut(s) 629, 661, 912, 944
Asp700I GAANNNNTTC 1 cut(s) 1366
AsuC2I CCSGG 1 cut(s) 572
AsuHPI GGTGA 3 cut(s) 287, 492, 1080
AvaI CYCGRG 1 cut(s) 131
AxyI CCTNAGG 1 cut(s) 255
BanII GRGCYC 1 cut(s) 691
BbsI GAAGAC 2 cut(s) 1055, 1369
Bbv12I GWGCWC 2 cut(s) 194, 691
BbvI GCAGC 6 cut(s) 114, 577, 815, 1054, 1165, 1193
BccI CCATC 3 cut(s) 1018, 1255, 1307
BceAI ACGGC 1 cut(s) 669
BciT130I CCWGG 5 cut(s) 318, 547, 791, 960, 1328
BciVI GTATCC 1 cut(s) 231
BcnI CCSGG 1 cut(s) 572
BcoDI GTCTC 2 cut(s) 61, 1332
BfaI CTAG 1 cut(s) 902
BfmI CTRYAG 3 cut(s) 693, 861, 1179
BfuAI ACCTGC 2 cut(s) 692, 1001
BfuI GTATCC 1 cut(s) 231
BisI GCNGC 6 cut(s) 128, 591, 804, 1068, 1179, 1182
BlpI GCTNAGC 1 cut(s) 193
BlsI GCNGC 6 cut(s) 129, 592, 805, 1069, 1180, 1183
Bme1390I CCNGG 6 cut(s) 318, 547, 572, 791, 960, 1328
BmeT110I CYCGRG 1 cut(s) 131
BmrFI CCNGG 6 cut(s) 318, 547, 572, 791, 960, 1328
BmrI ACTGGG 5 cut(s) 44, 80, 865, 875, 1053
BmsI GCATC 3 cut(s) 23, 1054, 1278
BmuI ACTGGG 5 cut(s) 44, 80, 865, 875, 1053
BpiI GAAGAC 2 cut(s) 1055, 1369
BpmI CTGGAG 2 cut(s) 300, 1310
Bpu1102I GCTNAGC 1 cut(s) 193
BpuEI CTTGAG 1 cut(s) 361
BpuMI CCSGG 1 cut(s) 572
Bsa29I ATCGAT 1 cut(s) 611
BsaJI CCNNGG 4 cut(s) 546, 789, 959, 1348
BsaWI WCCGGW 1 cut(s) 1402
BsaXI ACNNNNNCTCC 4 cut(s) 66, 96, 678, 708
Bsc4I CCNNNNNNNGG 3 cut(s) 55, 578, 795
Bse21I CCTNAGG 1 cut(s) 255
Bse3DI GCAATG 1 cut(s) 450
BseAI TCCGGA 1 cut(s) 1402
BseBI CCWGG 5 cut(s) 318, 547, 791, 960, 1328
BseCI ATCGAT 1 cut(s) 611
BseDI CCNNGG 4 cut(s) 546, 789, 959, 1348
BseGI GGATG 2 cut(s) 14, 580
BseLI CCNNNNNNNGG 3 cut(s) 55, 578, 795
BseMI GCAATG 1 cut(s) 450
BseMII CTCAG 7 cut(s) 207, 246, 293, 324, 504, 1267, 1392
BseXI GCAGC 6 cut(s) 114, 577, 815, 1054, 1165, 1193
BshFI GGCC 1 cut(s) 1321
BshVI ATCGAT 1 cut(s) 611
BsiHKAI GWGCWC 2 cut(s) 194, 691
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 2 cut(s) 572, 1403
BslFI GGGAC 1 cut(s) 780
BslI CCNNNNNNNGG 3 cut(s) 55, 578, 795
BsmAI GTCTC 2 cut(s) 61, 1332
BsmFI GGGAC 1 cut(s) 780
BsmI GAATGC 2 cut(s) 592, 1012
BsnI GGCC 1 cut(s) 1321
BsoBI CYCGRG 1 cut(s) 131
Bsp1286I GDGCHC 2 cut(s) 194, 691
Bsp13I TCCGGA 1 cut(s) 1402
Bsp143I GATC 4 cut(s) 159, 632, 1207, 1243
Bsp1720I GCTNAGC 1 cut(s) 193
BspACI CCGC 1 cut(s) 684
BspANI GGCC 1 cut(s) 1321
BspCNI CTCAG 7 cut(s) 206, 247, 294, 325, 505, 1266, 1391
BspDI ATCGAT 1 cut(s) 611
BspEI TCCGGA 1 cut(s) 1402
BspMAI CTGCAG 2 cut(s) 865, 1183
BspMI ACCTGC 2 cut(s) 692, 1001
BspPI GGATC 4 cut(s) 154, 640, 1202, 1238
BsrDI GCAATG 1 cut(s) 450
BssECI CCNNGG 4 cut(s) 546, 789, 959, 1348
BssMI GATC 4 cut(s) 159, 632, 1207, 1243
BssT1I CCWWGG 1 cut(s) 1348
Bst2UI CCWGG 5 cut(s) 318, 547, 791, 960, 1328
Bst4CI ACNGT 3 cut(s) 209, 521, 733
Bst6I CTCTTC 1 cut(s) 360
BstAPI GCANNNNNTGC 2 cut(s) 707, 1064
BstC8I GCNNGC 1 cut(s) 199
BstDEI CTNAG 8 cut(s) 193, 255, 269, 302, 333, 513, 1253, 1378
BstF5I GGATG 2 cut(s) 14, 580
BstKTI GATC 4 cut(s) 162, 635, 1210, 1246
BstMAI GTCTC 2 cut(s) 61, 1332
BstMBI GATC 4 cut(s) 159, 632, 1207, 1243
BstMWI GCNNNNNNNGC 7 cut(s) 11, 198, 707, 785, 1001, 1064, 1076
BstNI CCWGG 5 cut(s) 318, 547, 791, 960, 1328
BstSCI CCNGG 6 cut(s) 316, 545, 570, 789, 958, 1326
BstSFI CTRYAG 3 cut(s) 693, 861, 1179
BstV1I GCAGC 6 cut(s) 114, 577, 815, 1054, 1165, 1193
BstV2I GAAGAC 2 cut(s) 1055, 1369
BstX2I RGATCY 1 cut(s) 1243
BstYI RGATCY 1 cut(s) 1243
Bsu15I ATCGAT 1 cut(s) 611
Bsu36I CCTNAGG 1 cut(s) 255
BsuI GTATCC 1 cut(s) 231
BsuRI GGCC 1 cut(s) 1321
BsuTUI ATCGAT 1 cut(s) 611
BtsCI GGATG 2 cut(s) 14, 580
BtsI GCAGTG 1 cut(s) 1242
BtsIMutI CAGTG 6 cut(s) 214, 474, 678, 827, 1242, 1261
BveI ACCTGC 2 cut(s) 692, 1001
Cac8I GCNNGC 1 cut(s) 199
ClaI ATCGAT 1 cut(s) 611
CseI GACGC 1 cut(s) 1434
CviAII CATG 3 cut(s) 430, 490, 640
DdeI CTNAG 8 cut(s) 193, 255, 269, 302, 333, 513, 1253, 1378
DpnI GATC 4 cut(s) 161, 634, 1209, 1245
DpnII GATC 4 cut(s) 159, 632, 1207, 1243
DraIII CACNNNGTG 2 cut(s) 211, 1256
Eam1104I CTCTTC 1 cut(s) 360
EarI CTCTTC 1 cut(s) 360
EciI GGCGGA 1 cut(s) 699
Ecl136II GAGCTC 1 cut(s) 689
Eco130I CCWWGG 1 cut(s) 1348
Eco24I GRGCYC 1 cut(s) 691
Eco32I GATATC 1 cut(s) 1102
Eco53kI GAGCTC 1 cut(s) 689
Eco81I CCTNAGG 1 cut(s) 255
Eco88I CYCGRG 1 cut(s) 131
EcoICRI GAGCTC 1 cut(s) 689
EcoRII CCWGG 5 cut(s) 316, 545, 789, 958, 1326
EcoRV GATATC 1 cut(s) 1102
EcoT14I CCWWGG 1 cut(s) 1348
EcoT22I ATGCAT 1 cut(s) 16
EcoT38I GRGCYC 1 cut(s) 691
ErhI CCWWGG 1 cut(s) 1348
FaeI CATG 3 cut(s) 433, 493, 643
FaqI GGGAC 1 cut(s) 780
FatI CATG 3 cut(s) 429, 489, 639
FauNDI CATATG 1 cut(s) 10
FblI GTMKAC 3 cut(s) 170, 875, 975
Fnu4HI GCNGC 6 cut(s) 128, 591, 804, 1068, 1179, 1182
FokI GGATG 1 cut(s) 587
FriOI GRGCYC 1 cut(s) 691
Fsp4HI GCNGC 6 cut(s) 128, 591, 804, 1068, 1179, 1182
FspBI CTAG 1 cut(s) 902
GluI GCNGC 6 cut(s) 128, 591, 804, 1068, 1179, 1182
GsuI CTGGAG 2 cut(s) 300, 1310
HaeIII GGCC 1 cut(s) 1321
HapII CCGG 2 cut(s) 572, 1403
HgaI GACGC 1 cut(s) 1434
Hin1II CATG 3 cut(s) 433, 493, 643
HincII GTYRAC 4 cut(s) 171, 472, 823, 976
HindII GTYRAC 4 cut(s) 171, 472, 823, 976
HinfI GANTC 7 cut(s) 94, 244, 608, 955, 1290, 1353, 1399
HpaI GTTAAC 1 cut(s) 472
HpaII CCGG 2 cut(s) 572, 1403
HphI GGTGA 3 cut(s) 287, 492, 1080
Hpy166II GTNNAC 6 cut(s) 171, 472, 524, 823, 876, 976
Hpy188I TCNGA 8 cut(s) 37, 225, 243, 303, 360, 637, 943, 1381
Hpy188III TCNNGA 7 cut(s) 463, 512, 536, 952, 1132, 1403, 1411
Hpy8I GTNNAC 6 cut(s) 171, 472, 524, 823, 876, 976
Hpy99I CGWCG 1 cut(s) 295
HpyAV CCTTC 5 cut(s) 442, 788, 1376, 1377, 1384
HpyCH4III ACNGT 3 cut(s) 209, 521, 733
HpyCH4IV ACGT 2 cut(s) 290, 1432
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 198, 707, 785, 1001, 1064, 1076
HpyF3I CTNAG 8 cut(s) 193, 255, 269, 302, 333, 513, 1253, 1378
HpySE526I ACGT 2 cut(s) 290, 1432
Hsp92II CATG 3 cut(s) 433, 493, 643
Kpn2I TCCGGA 1 cut(s) 1402
KspAI GTTAAC 1 cut(s) 472
Kzo9I GATC 4 cut(s) 159, 632, 1207, 1243
LmnI GCTCC 3 cut(s) 686, 694, 1232
Lsp1109I GCAGC 6 cut(s) 114, 577, 815, 1054, 1165, 1193
LweI GCATC 3 cut(s) 23, 1054, 1278
MaeI CTAG 1 cut(s) 902
MaeII ACGT 2 cut(s) 290, 1432
MaeIII GTNAC 6 cut(s) 328, 498, 649, 742, 883, 1237
MalI GATC 4 cut(s) 161, 634, 1209, 1245
MboI GATC 4 cut(s) 159, 632, 1207, 1243
MboII GAAGA 8 cut(s) 347, 629, 1008, 1060, 1316, 1374, 1426, 1429
MflI RGATCY 1 cut(s) 1243
MhlI GDGCHC 2 cut(s) 194, 691
MluCI AATT 5 cut(s) 182, 364, 1125, 1219, 1278
MmeI TCCRAC 1 cut(s) 1235
Mph1103I ATGCAT 1 cut(s) 16
MroI TCCGGA 1 cut(s) 1402
MroXI GAANNNNTTC 1 cut(s) 1366
MseI TTAA 6 cut(s) 186, 384, 471, 897, 1073, 1223
MslI CAYNNNNRTG 1 cut(s) 494
MspI CCGG 2 cut(s) 572, 1403
MspR9I CCNGG 6 cut(s) 318, 547, 572, 791, 960, 1328
Mva1269I GAATGC 2 cut(s) 592, 1012
MvaI CCWGG 5 cut(s) 318, 547, 791, 960, 1328
MwoI GCNNNNNNNGC 7 cut(s) 11, 198, 707, 785, 1001, 1064, 1076
NciI CCSGG 1 cut(s) 572
NdeI CATATG 1 cut(s) 10
NdeII GATC 4 cut(s) 159, 632, 1207, 1243
NlaIII CATG 3 cut(s) 433, 493, 643
NmuCI GTSAC 4 cut(s) 328, 498, 742, 1237
NsiI ATGCAT 1 cut(s) 16
PaqCI CACCTGC 1 cut(s) 692
PctI GAATGC 2 cut(s) 592, 1012
PdmI GAANNNNTTC 1 cut(s) 1366
PfeI GAWTC 7 cut(s) 94, 244, 608, 955, 1290, 1353, 1399
PkrI GCNGC 6 cut(s) 129, 592, 805, 1069, 1180, 1183
Psp124BI GAGCTC 1 cut(s) 691
Psp6I CCWGG 5 cut(s) 316, 545, 789, 958, 1326
PspGI CCWGG 5 cut(s) 316, 545, 789, 958, 1326
PstI CTGCAG 2 cut(s) 865, 1183
PsuI RGATCY 1 cut(s) 1243
RseI CAYNNNNRTG 1 cut(s) 494
SacI GAGCTC 1 cut(s) 691
SalI GTCGAC 2 cut(s) 169, 974
SaqAI TTAA 6 cut(s) 186, 384, 471, 897, 1073, 1223
SatI GCNGC 6 cut(s) 128, 591, 804, 1068, 1179, 1182
Sau3AI GATC 4 cut(s) 159, 632, 1207, 1243
ScrFI CCNGG 6 cut(s) 318, 547, 572, 791, 960, 1328
SduI GDGCHC 2 cut(s) 194, 691
SfaNI GCATC 3 cut(s) 23, 1054, 1278
SfcI CTRYAG 3 cut(s) 693, 861, 1179
SmiMI CAYNNNNRTG 1 cut(s) 494
SmlI CTYRAG 1 cut(s) 340
SmoI CTYRAG 1 cut(s) 340
Sse9I AATT 5 cut(s) 182, 364, 1125, 1219, 1278
SsiI CCGC 1 cut(s) 684
SspI AATATT 1 cut(s) 1227
SspMI CTAG 1 cut(s) 902
SstI GAGCTC 1 cut(s) 691
StyD4I CCNGG 6 cut(s) 316, 545, 570, 789, 958, 1326
StyI CCWWGG 1 cut(s) 1348
TaaI ACNGT 3 cut(s) 209, 521, 733
TaiI ACGT 2 cut(s) 293, 1435
TaqI TCGA 6 cut(s) 43, 170, 293, 611, 975, 1360
TaqII GACCGA 1 cut(s) 521
TasI AATT 5 cut(s) 182, 364, 1125, 1219, 1278
TfiI GAWTC 7 cut(s) 94, 244, 608, 955, 1290, 1353, 1399
Tru1I TTAA 6 cut(s) 186, 384, 471, 897, 1073, 1223
Tru9I TTAA 6 cut(s) 186, 384, 471, 897, 1073, 1223
TscAI CASTG 6 cut(s) 214, 481, 685, 834, 1242, 1261
TseFI GTSAC 4 cut(s) 328, 498, 742, 1237
TseI GCWGC 6 cut(s) 127, 590, 803, 1067, 1178, 1181
Tsp45I GTSAC 4 cut(s) 328, 498, 742, 1237
TspDTI ATGAA 3 cut(s) 461, 599, 1008
TspRI CASTG 6 cut(s) 214, 481, 685, 834, 1242, 1261
XapI RAATTY 1 cut(s) 1219
XmiI GTMKAC 3 cut(s) 170, 875, 975
XmnI GAANNNNTTC 1 cut(s) 1366
XspI CTAG 1 cut(s) 902
Zsp2I ATGCAT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.