RLG00000024015

Cell division protein ftsZ

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
30900023 .. 30901219
1197 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024015

Sequence Viewer

Length: 315 bp
ATGGTGAATGCAGTTTCTTCATTGATGAGGATAGGATCTGCAACTGGTCTGGATATGCATTCTGTTACAATTGTGGAGTACAAGTTGTCACTCATACAGCTACCTGTCGAAGCTGTCGTTAGCATCACTCTAATTGCTTCTGGATTCAAACGCCAAGAAGAAAGTGATGGGAGGCGACTCCGGGCACAAGGAGACATTACTCTTGGAAATTGGAATCAATCTAAGACCACCCTCCTTCTCAGAAGGCAGTTCAGTCGAGATTCCCGATTTCTTGAAGAAGAAGAAGAAAGGACGTTCACGTTATCAAGAGTTTGA

Protein Analysis

105

Amino Acids

11.79

Weight (kDa)

8.21

Isoelectric Point (pI)

67.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000552)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36250 AT2G36250 AT2G36250 AT2G36250 AT3G52750 AT3G52750 AT3G52750 AT3G52750
fragaria_vesca FvH4_6g18610 FvH4_6g18610 FvH4_6g18610 FvH4_6g18610
malus_domestica MD12G1035600.v1.1 MD14G1022400.v1.1
prunus_persica Prupe.7G110900_v2.0.a1 Prupe.7G110900_v2.0.a1
pyrus_communis pycom12g02340 pycom14g02140
rosa_chinensis RchiOBHm_Chr3g0473191 RchiOBHm_Chr3g0473221 RchiOBHm_Chr3g0473231 RchiOBHm_Chr3g0473301 RchiOBHm_Chr3g0473311 RchiOBHm_Chr3g0473351 RchiOBHm_Chr3g0473401 RchiOBHm_Chr3g0473491 RchiOBHm_Chr3g0473541 RchiOBHm_Chr5g0044451 RchiOBHm_Chr7g0190991
rosa_laevigata RLG00000019977 RLG00000024009 RLG00000024012 RLG00000024015 RLG00000024018 RLG00000024019 RLG00000024021 RLG00000030788
rosa_multiflora Rmu_sc0000327.1_g000039 Rmu_sc0002075.1_g000002 Rmu_sc0003069.1_g000018 Rmu_sc0003069.1_g000050 Rmu_sc0003069.1_g000058 Rmu_sc0006792.1_g000029 Rmu_sc0011598.1_g000001 Rmu_sc0016164.1_g000018
rosa_roxburghii Rroxscaffold_2G00102410 Rroxscaffold_2G00102420 Rroxscaffold_4G00324300 Rroxscaffold_6G00408060 Rroxscaffold_6G00408100 Rroxscaffold_6G00408130 Rroxscaffold_6G00408200 Rroxscaffold_6G00408220 Rroxscaffold_6G00408230
rosa_rugosa Rorug03G0132100 Rorug03G0132500 Rorug03G0132600 Rorug03G0132900 Rorug05G0214500 Rorug06G0144900
rosa_samantha Rh3AG183800 Rh3AG184500 Rh3BG210300 Rh3BG210500 Rh3BG210800 Rh3BG211200 Rh3BG211600 Rh3BG211800 Rh3BG212000 Rh3BG212200 Rh3BG212400 Rh3BG212500 Rh3CG207400 Rh3CG207500 Rh3CG207700 Rh3CG209100 Rh3DG207400 Rh3DG208500 Rh5BG305900 Rh5DG315200
rosa_wichuraiana Rw0G008130 Rw0G008180 Rw0G014760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 43
AfaI GTAC 1 cut(s) 80
AgsI TTSAA 2 cut(s) 148, 275
AluBI AGCT 2 cut(s) 100, 113
AluI AGCT 2 cut(s) 100, 113
Alw26I GTCTC 1 cut(s) 186
AlwI GGATC 1 cut(s) 43
AsuC2I CCSGG 1 cut(s) 182
AsuHPI GGTGA 1 cut(s) 16
BaeGI GKGCMC 1 cut(s) 187
BccI CCATC 1 cut(s) 161
BcgI CGANNNNNNTGC 2 cut(s) 236, 270
BcnI CCSGG 1 cut(s) 182
BcoDI GTCTC 1 cut(s) 186
Bme1390I CCNGG 1 cut(s) 182
BmrFI CCNGG 1 cut(s) 182
BmsI GCATC 1 cut(s) 132
BpuMI CCSGG 1 cut(s) 182
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bse1I ACTGG 1 cut(s) 49
BseMII CTCAG 1 cut(s) 253
BseNI ACTGG 1 cut(s) 49
BseSI GKGCMC 1 cut(s) 187
BsiSI CCGG 1 cut(s) 181
BsmAI GTCTC 1 cut(s) 186
BsmI GAATGC 2 cut(s) 13, 58
Bsp1286I GDGCHC 1 cut(s) 187
Bsp143I GATC 1 cut(s) 35
BspCNI CTCAG 1 cut(s) 252
BspPI GGATC 1 cut(s) 43
BsrI ACTGG 1 cut(s) 49
BssMI GATC 1 cut(s) 35
BstDEI CTNAG 2 cut(s) 222, 239
BstKTI GATC 1 cut(s) 38
BstMAI GTCTC 1 cut(s) 186
BstMBI GATC 1 cut(s) 35
BstSCI CCNGG 1 cut(s) 180
BstSLI GKGCMC 1 cut(s) 187
BstX2I RGATCY 1 cut(s) 35
BstYI RGATCY 1 cut(s) 35
Csp6I GTAC 1 cut(s) 79
CviJI RGCY 2 cut(s) 100, 113
CviKI_1 RGCY 2 cut(s) 100, 113
CviQI GTAC 1 cut(s) 79
DdeI CTNAG 2 cut(s) 222, 239
DpnI GATC 1 cut(s) 37
DpnII GATC 1 cut(s) 35
EcoT22I ATGCAT 1 cut(s) 60
FaiI YATR 2 cut(s) 56, 95
HapII CCGG 1 cut(s) 181
HinfI GANTC 4 cut(s) 144, 177, 214, 260
HpaII CCGG 1 cut(s) 181
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 297
Hpy188I TCNGA 1 cut(s) 242
Hpy188III TCNNGA 6 cut(s) 50, 141, 257, 264, 272, 306
Hpy8I GTNNAC 1 cut(s) 297
HpyAV CCTTC 2 cut(s) 237, 245
HpyCH4IV ACGT 2 cut(s) 293, 299
HpyCH4V TGCA 3 cut(s) 11, 41, 58
HpyF3I CTNAG 2 cut(s) 222, 239
HpySE526I ACGT 2 cut(s) 293, 299
Kzo9I GATC 1 cut(s) 35
LpnPI CCDG 5 cut(s) 30, 35, 117, 126, 194
LweI GCATC 1 cut(s) 132
MaeII ACGT 2 cut(s) 293, 299
MaeIII GTNAC 2 cut(s) 64, 87
MalI GATC 1 cut(s) 37
MboI GATC 1 cut(s) 35
MboII GAAGA 6 cut(s) 9, 170, 287, 290, 293, 296
MfeI CAATTG 1 cut(s) 69
MflI RGATCY 1 cut(s) 35
MhlI GDGCHC 1 cut(s) 187
MluCI AATT 3 cut(s) 69, 132, 208
MlyI GAGTC 1 cut(s) 171
MnlI CCTC 3 cut(s) 21, 165, 242
Mph1103I ATGCAT 1 cut(s) 60
MspI CCGG 1 cut(s) 181
MspR9I CCNGG 1 cut(s) 182
MunI CAATTG 1 cut(s) 69
Mva1269I GAATGC 2 cut(s) 13, 58
NciI CCSGG 1 cut(s) 182
NdeII GATC 1 cut(s) 35
NmuCI GTSAC 1 cut(s) 87
NsiI ATGCAT 1 cut(s) 60
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 262
PctI GAATGC 2 cut(s) 13, 58
PfeI GAWTC 3 cut(s) 144, 214, 260
PleI GAGTC 1 cut(s) 171
PpsI GAGTC 1 cut(s) 171
PsuI RGATCY 1 cut(s) 35
RsaI GTAC 1 cut(s) 80
RsaNI GTAC 1 cut(s) 79
Sau3AI GATC 1 cut(s) 35
SchI GAGTC 1 cut(s) 171
ScrFI CCNGG 1 cut(s) 182
SduI GDGCHC 1 cut(s) 187
SetI ASST 5 cut(s) 102, 106, 115, 296, 302
SfaNI GCATC 1 cut(s) 132
Sse9I AATT 3 cut(s) 69, 132, 208
StyD4I CCNGG 1 cut(s) 180
TaiI ACGT 2 cut(s) 296, 302
TaqI TCGA 2 cut(s) 108, 256
TasI AATT 3 cut(s) 69, 132, 208
TatI WGTACW 1 cut(s) 78
TfiI GAWTC 3 cut(s) 144, 214, 260
TseFI GTSAC 1 cut(s) 87
Tsp45I GTSAC 1 cut(s) 87
TspDTI ATGAA 1 cut(s) 9
Zsp2I ATGCAT 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.