Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 32 - 277 | 8.8e-74 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 249 |
| AclWI | GGATC | 1 cut(s) | 861 |
| AcsI | RAATTY | 7 cut(s) | 39, 494, 667, 1120, 1133, 1247, 1294 |
| AcuI | CTGAAG | 2 cut(s) | 420, 485 |
| AfaI | GTAC | 2 cut(s) | 554, 1376 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1002 |
| AflII | CTTAAG | 1 cut(s) | 1424 |
| AgsI | TTSAA | 9 cut(s) | 31, 361, 445, 784, 992, 1132, 1307, 1469, 1541 |
| AhlI | ACTAGT | 1 cut(s) | 109 |
| Alw26I | GTCTC | 2 cut(s) | 248, 794 |
| AlwI | GGATC | 1 cut(s) | 861 |
| AoxI | GGCC | 3 cut(s) | 1004, 1337, 1483 |
| ApoI | RAATTY | 7 cut(s) | 39, 494, 667, 1120, 1133, 1247, 1294 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1106, 1138 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 111, 1295 |
| AspA2I | CCTAGG | 1 cut(s) | 1001 |
| AspS9I | GGNCC | 2 cut(s) | 1398, 1484 |
| AsuHPI | GGTGA | 5 cut(s) | 377, 701, 848, 1462, 1472 |
| AvaII | GGWCC | 1 cut(s) | 1398 |
| AvrII | CCTAGG | 1 cut(s) | 1001 |
| BbsI | GAAGAC | 1 cut(s) | 1058 |
| BccI | CCATC | 4 cut(s) | 173, 331, 1147, 1166 |
| BcoDI | GTCTC | 2 cut(s) | 248, 794 |
| BcuI | ACTAGT | 1 cut(s) | 109 |
| BfaI | CTAG | 7 cut(s) | 110, 204, 417, 477, 696, 1002, 1335 |
| BfmI | CTRYAG | 1 cut(s) | 371 |
| BfrI | CTTAAG | 1 cut(s) | 1424 |
| BglII | AGATCT | 1 cut(s) | 143 |
| BlnI | CCTAGG | 1 cut(s) | 1001 |
| Bme18I | GGWCC | 1 cut(s) | 1398 |
| BmgT120I | GGNCC | 2 cut(s) | 1398, 1484 |
| BmsI | GCATC | 3 cut(s) | 271, 482, 1570 |
| BpiI | GAAGAC | 1 cut(s) | 1058 |
| Bpu10I | CCTNAGC | 2 cut(s) | 216, 1008 |
| Bsa29I | ATCGAT | 1 cut(s) | 452 |
| BsaJI | CCNNGG | 2 cut(s) | 84, 1001 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 247, 277, 1176, 1206 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1002 |
| Bse3DI | GCAATG | 3 cut(s) | 69, 488, 1251 |
| BseCI | ATCGAT | 1 cut(s) | 452 |
| BseDI | CCNNGG | 2 cut(s) | 84, 1001 |
| BseGI | GGATG | 2 cut(s) | 346, 1139 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1002 |
| BseMI | GCAATG | 3 cut(s) | 69, 488, 1251 |
| BseMII | CTCAG | 4 cut(s) | 414, 555, 999, 1508 |
| BseRI | GAGGAG | 2 cut(s) | 392, 1200 |
| BshFI | GGCC | 3 cut(s) | 1006, 1339, 1485 |
| BshVI | ATCGAT | 1 cut(s) | 452 |
| BslFI | GGGAC | 2 cut(s) | 846, 1434 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1002 |
| BsmAI | GTCTC | 2 cut(s) | 248, 794 |
| BsmFI | GGGAC | 2 cut(s) | 846, 1434 |
| BsmI | GAATGC | 1 cut(s) | 1127 |
| BsnI | GGCC | 3 cut(s) | 1006, 1339, 1485 |
| Bsp1407I | TGTACA | 1 cut(s) | 552 |
| Bsp143I | GATC | 3 cut(s) | 3, 143, 853 |
| Bsp19I | CCATGG | 1 cut(s) | 84 |
| BspANI | GGCC | 3 cut(s) | 1006, 1339, 1485 |
| BspCNI | CTCAG | 4 cut(s) | 415, 556, 1000, 1507 |
| BspDI | ATCGAT | 1 cut(s) | 452 |
| BspHI | TCATGA | 1 cut(s) | 387 |
| BspPI | GGATC | 1 cut(s) | 861 |
| BspTI | CTTAAG | 1 cut(s) | 1424 |
| BsrDI | GCAATG | 3 cut(s) | 69, 488, 1251 |
| BsrGI | TGTACA | 1 cut(s) | 552 |
| BssECI | CCNNGG | 2 cut(s) | 84, 1001 |
| BssMI | GATC | 3 cut(s) | 3, 143, 853 |
| BssT1I | CCWWGG | 2 cut(s) | 84, 1001 |
| Bst4CI | ACNGT | 2 cut(s) | 987, 1436 |
| BstAFI | CTTAAG | 1 cut(s) | 1424 |
| BstAUI | TGTACA | 1 cut(s) | 552 |
| BstC8I | GCNNGC | 4 cut(s) | 471, 736, 1242, 1500 |
| BstDSI | CCRYGG | 1 cut(s) | 84 |
| BstF5I | GGATG | 2 cut(s) | 346, 1139 |
| BstKTI | GATC | 3 cut(s) | 6, 146, 856 |
| BstMAI | GTCTC | 2 cut(s) | 248, 794 |
| BstMBI | GATC | 3 cut(s) | 3, 143, 853 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 308, 1187, 1526 |
| BstNSI | RCATGY | 2 cut(s) | 945, 1550 |
| BstSFI | CTRYAG | 1 cut(s) | 371 |
| BstV2I | GAAGAC | 1 cut(s) | 1058 |
| BstX2I | RGATCY | 1 cut(s) | 143 |
| BstYI | RGATCY | 1 cut(s) | 143 |
| Bsu15I | ATCGAT | 1 cut(s) | 452 |
| BsuRI | GGCC | 3 cut(s) | 1006, 1339, 1485 |
| BsuTUI | ATCGAT | 1 cut(s) | 452 |
| BtgI | CCRYGG | 1 cut(s) | 84 |
| BtsCI | GGATG | 2 cut(s) | 346, 1139 |
| BtsI | GCAGTG | 1 cut(s) | 1536 |
| BtsIMutI | CAGTG | 3 cut(s) | 983, 1441, 1536 |
| Cac8I | GCNNGC | 4 cut(s) | 471, 736, 1242, 1500 |
| CciI | TCATGA | 1 cut(s) | 387 |
| Cfr13I | GGNCC | 2 cut(s) | 1398, 1484 |
| ClaI | ATCGAT | 1 cut(s) | 452 |
| Csp6I | GTAC | 2 cut(s) | 553, 1375 |
| CviAII | CATG | 7 cut(s) | 85, 388, 676, 889, 942, 1457, 1547 |
| CviQI | GTAC | 2 cut(s) | 553, 1375 |
| DpnI | GATC | 3 cut(s) | 5, 145, 855 |
| DpnII | GATC | 3 cut(s) | 3, 143, 853 |
| DraI | TTTAAA | 3 cut(s) | 18, 199, 492 |
| Eco130I | CCWWGG | 2 cut(s) | 84, 1001 |
| Eco147I | AGGCCT | 1 cut(s) | 1006 |
| Eco47I | GGWCC | 1 cut(s) | 1398 |
| Eco57I | CTGAAG | 2 cut(s) | 420, 485 |
| EcoRI | GAATTC | 1 cut(s) | 1247 |
| EcoT14I | CCWWGG | 2 cut(s) | 84, 1001 |
| ErhI | CCWWGG | 2 cut(s) | 84, 1001 |
| FaeI | CATG | 7 cut(s) | 88, 391, 679, 892, 945, 1460, 1550 |
| FaqI | GGGAC | 2 cut(s) | 846, 1434 |
| FatI | CATG | 7 cut(s) | 84, 387, 675, 888, 941, 1456, 1546 |
| FauNDI | CATATG | 1 cut(s) | 1065 |
| FokI | GGATG | 2 cut(s) | 353, 1126 |
| FspBI | CTAG | 7 cut(s) | 110, 204, 417, 477, 696, 1002, 1335 |
| HaeIII | GGCC | 3 cut(s) | 1006, 1339, 1485 |
| Hin1II | CATG | 7 cut(s) | 88, 391, 679, 892, 945, 1460, 1550 |
| HinfI | GANTC | 1 cut(s) | 1115 |
| HphI | GGTGA | 5 cut(s) | 377, 701, 848, 1462, 1472 |
| Hpy166II | GTNNAC | 5 cut(s) | 225, 553, 1075, 1155, 1375 |
| Hpy188I | TCNGA | 4 cut(s) | 73, 290, 465, 974 |
| Hpy188III | TCNNGA | 2 cut(s) | 388, 772 |
| Hpy8I | GTNNAC | 5 cut(s) | 225, 553, 1075, 1155, 1375 |
| HpyAV | CCTTC | 5 cut(s) | 230, 395, 769, 1024, 1271 |
| HpyCH4III | ACNGT | 2 cut(s) | 987, 1436 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 308, 1187, 1526 |
| Hsp92II | CATG | 7 cut(s) | 88, 391, 679, 892, 945, 1460, 1550 |
| Kzo9I | GATC | 3 cut(s) | 3, 143, 853 |
| LmnI | GCTCC | 1 cut(s) | 1187 |
| LweI | GCATC | 3 cut(s) | 271, 482, 1570 |
| MaeI | CTAG | 7 cut(s) | 110, 204, 417, 477, 696, 1002, 1335 |
| MaeIII | GTNAC | 2 cut(s) | 753, 1112 |
| MalI | GATC | 3 cut(s) | 5, 145, 855 |
| MboI | GATC | 3 cut(s) | 3, 143, 853 |
| MboII | GAAGA | 5 cut(s) | 676, 895, 1039, 1063, 1553 |
| MflI | RGATCY | 1 cut(s) | 143 |
| MlyI | GAGTC | 1 cut(s) | 1109 |
| MmeI | TCCRAC | 1 cut(s) | 490 |
| MnlI | CCTC | 9 cut(s) | 49, 370, 559, 754, 886, 1153, 1178, 1389, 1434 |
| MroXI | GAANNNNTTC | 2 cut(s) | 111, 1295 |
| MslI | CAYNNNNRTG | 1 cut(s) | 940 |
| MspA1I | CMGCKG | 1 cut(s) | 913 |
| MspCI | CTTAAG | 1 cut(s) | 1424 |
| Mva1269I | GAATGC | 1 cut(s) | 1127 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 308, 1187, 1526 |
| NcoI | CCATGG | 1 cut(s) | 84 |
| NdeI | CATATG | 1 cut(s) | 1065 |
| NdeII | GATC | 3 cut(s) | 3, 143, 853 |
| NlaIII | CATG | 7 cut(s) | 88, 391, 679, 892, 945, 1460, 1550 |
| NmuCI | GTSAC | 2 cut(s) | 753, 1112 |
| NspI | RCATGY | 2 cut(s) | 945, 1550 |
| PagI | TCATGA | 1 cut(s) | 387 |
| PceI | AGGCCT | 1 cut(s) | 1006 |
| PctI | GAATGC | 1 cut(s) | 1127 |
| PdmI | GAANNNNTTC | 2 cut(s) | 111, 1295 |
| PleI | GAGTC | 1 cut(s) | 1109 |
| PpsI | GAGTC | 1 cut(s) | 1109 |
| PsiI | TTATAA | 1 cut(s) | 249 |
| PspPI | GGNCC | 2 cut(s) | 1398, 1484 |
| PsuI | RGATCY | 1 cut(s) | 143 |
| PvuII | CAGCTG | 1 cut(s) | 913 |
| RsaI | GTAC | 2 cut(s) | 554, 1376 |
| RsaNI | GTAC | 2 cut(s) | 553, 1375 |
| RseI | CAYNNNNRTG | 1 cut(s) | 940 |
| Sau3AI | GATC | 3 cut(s) | 3, 143, 853 |
| Sau96I | GGNCC | 2 cut(s) | 1398, 1484 |
| SchI | GAGTC | 1 cut(s) | 1109 |
| SfaNI | GCATC | 3 cut(s) | 271, 482, 1570 |
| SfcI | CTRYAG | 1 cut(s) | 371 |
| SinI | GGWCC | 1 cut(s) | 1398 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 940 |
| SmlI | CTYRAG | 1 cut(s) | 1424 |
| SmoI | CTYRAG | 1 cut(s) | 1424 |
| SpeI | ACTAGT | 1 cut(s) | 109 |
| SseBI | AGGCCT | 1 cut(s) | 1006 |
| SspI | AATATT | 2 cut(s) | 683, 1349 |
| SspMI | CTAG | 7 cut(s) | 110, 204, 417, 477, 696, 1002, 1335 |
| StuI | AGGCCT | 1 cut(s) | 1006 |
| StyI | CCWWGG | 2 cut(s) | 84, 1001 |
| TaaI | ACNGT | 2 cut(s) | 987, 1436 |
| TaqI | TCGA | 2 cut(s) | 452, 662 |
| TatI | WGTACW | 2 cut(s) | 552, 1374 |
| TscAI | CASTG | 3 cut(s) | 990, 1441, 1536 |
| TseFI | GTSAC | 2 cut(s) | 753, 1112 |
| Tsp45I | GTSAC | 2 cut(s) | 753, 1112 |
| TspDTI | ATGAA | 5 cut(s) | 376, 404, 692, 1240, 1358 |
| TspRI | CASTG | 3 cut(s) | 990, 1441, 1536 |
| Vha464I | CTTAAG | 1 cut(s) | 1424 |
| VpaK11BI | GGWCC | 1 cut(s) | 1398 |
| XapI | RAATTY | 7 cut(s) | 39, 494, 667, 1120, 1133, 1247, 1294 |
| XceI | RCATGY | 2 cut(s) | 945, 1550 |
| XmaJI | CCTAGG | 1 cut(s) | 1001 |
| XmnI | GAANNNNTTC | 2 cut(s) | 111, 1295 |
| XspI | CTAG | 7 cut(s) | 110, 204, 417, 477, 696, 1002, 1335 |