Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 2 - 89 | 3.9e-26 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 452 |
| AcsI | RAATTY | 1 cut(s) | 197 |
| AfaI | GTAC | 1 cut(s) | 431 |
| AjnI | CCWGG | 1 cut(s) | 103 |
| AluBI | AGCT | 4 cut(s) | 14, 31, 176, 320 |
| AluI | AGCT | 4 cut(s) | 14, 31, 176, 320 |
| Alw21I | GWGCWC | 1 cut(s) | 132 |
| AlwI | GGATC | 1 cut(s) | 452 |
| Ama87I | CYCGRG | 1 cut(s) | 521 |
| AoxI | GGCC | 3 cut(s) | 3, 163, 290 |
| ApeKI | GCWGC | 3 cut(s) | 31, 320, 536 |
| ApoI | RAATTY | 1 cut(s) | 197 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 43, 75 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 302 |
| AspS9I | GGNCC | 1 cut(s) | 291 |
| AsuHPI | GGTGA | 1 cut(s) | 412 |
| AvaI | CYCGRG | 1 cut(s) | 521 |
| Bbv12I | GWGCWC | 1 cut(s) | 132 |
| BbvI | GCAGC | 3 cut(s) | 18, 307, 548 |
| BccI | CCATC | 1 cut(s) | 235 |
| BceAI | ACGGC | 1 cut(s) | 178 |
| BciT130I | CCWGG | 1 cut(s) | 105 |
| BfaI | CTAG | 1 cut(s) | 386 |
| BisI | GCNGC | 3 cut(s) | 32, 321, 537 |
| BlsI | GCNGC | 3 cut(s) | 33, 322, 538 |
| Bme1390I | CCNGG | 1 cut(s) | 105 |
| BmeT110I | CYCGRG | 1 cut(s) | 521 |
| BmgT120I | GGNCC | 1 cut(s) | 291 |
| BmrFI | CCNGG | 1 cut(s) | 105 |
| BmsI | GCATC | 3 cut(s) | 43, 84, 523 |
| BpuEI | CTTGAG | 1 cut(s) | 152 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 60, 90 |
| Bse1I | ACTGG | 1 cut(s) | 479 |
| Bse3DI | GCAATG | 2 cut(s) | 191, 450 |
| BseBI | CCWGG | 1 cut(s) | 105 |
| BseGI | GGATG | 3 cut(s) | 49, 250, 379 |
| BseMI | GCAATG | 2 cut(s) | 191, 450 |
| BseMII | CTCAG | 1 cut(s) | 160 |
| BseNI | ACTGG | 1 cut(s) | 479 |
| BseXI | GCAGC | 3 cut(s) | 18, 307, 548 |
| BshFI | GGCC | 3 cut(s) | 5, 165, 292 |
| BsiHKAI | GWGCWC | 1 cut(s) | 132 |
| BsiHKCI | CYCGRG | 1 cut(s) | 521 |
| BslFI | GGGAC | 1 cut(s) | 410 |
| BsmFI | GGGAC | 1 cut(s) | 410 |
| BsnI | GGCC | 3 cut(s) | 5, 165, 292 |
| BsoBI | CYCGRG | 1 cut(s) | 521 |
| Bsp1286I | GDGCHC | 1 cut(s) | 132 |
| Bsp143I | GATC | 3 cut(s) | 417, 457, 541 |
| BspANI | GGCC | 3 cut(s) | 5, 165, 292 |
| BspCNI | CTCAG | 1 cut(s) | 159 |
| BspPI | GGATC | 1 cut(s) | 452 |
| BsrDI | GCAATG | 2 cut(s) | 191, 450 |
| BsrI | ACTGG | 1 cut(s) | 479 |
| BssMI | GATC | 3 cut(s) | 417, 457, 541 |
| Bst2UI | CCWGG | 1 cut(s) | 105 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 452 |
| BstC8I | GCNNGC | 1 cut(s) | 174 |
| BstDEI | CTNAG | 2 cut(s) | 7, 146 |
| BstF5I | GGATG | 3 cut(s) | 49, 250, 379 |
| BstKTI | GATC | 3 cut(s) | 420, 460, 544 |
| BstMBI | GATC | 3 cut(s) | 417, 457, 541 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 452 |
| BstNI | CCWGG | 1 cut(s) | 105 |
| BstSCI | CCNGG | 1 cut(s) | 103 |
| BstV1I | GCAGC | 3 cut(s) | 18, 307, 548 |
| BsuRI | GGCC | 3 cut(s) | 5, 165, 292 |
| BtsCI | GGATG | 3 cut(s) | 49, 250, 379 |
| BtsIMutI | CAGTG | 2 cut(s) | 486, 551 |
| Cac8I | GCNNGC | 1 cut(s) | 174 |
| Cfr13I | GGNCC | 1 cut(s) | 291 |
| CsiI | ACCWGGT | 1 cut(s) | 103 |
| Csp6I | GTAC | 1 cut(s) | 430 |
| CviAII | CATG | 3 cut(s) | 133, 370, 500 |
| CviJI | RGCY | 7 cut(s) | 5, 14, 31, 165, 176, 292, 320 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 14, 31, 165, 176, 292, 320 |
| CviQI | GTAC | 1 cut(s) | 430 |
| DdeI | CTNAG | 2 cut(s) | 7, 146 |
| DpnI | GATC | 3 cut(s) | 419, 459, 543 |
| DpnII | GATC | 3 cut(s) | 417, 457, 541 |
| Eco88I | CYCGRG | 1 cut(s) | 521 |
| EcoO109I | RGGNCCY | 1 cut(s) | 291 |
| EcoRII | CCWGG | 1 cut(s) | 103 |
| FaeI | CATG | 3 cut(s) | 136, 373, 503 |
| FaiI | YATR | 7 cut(s) | 90, 92, 134, 139, 371, 501, 512 |
| FaqI | GGGAC | 1 cut(s) | 410 |
| FatI | CATG | 3 cut(s) | 132, 369, 499 |
| Fnu4HI | GCNGC | 3 cut(s) | 32, 321, 537 |
| FokI | GGATG | 3 cut(s) | 56, 257, 386 |
| Fsp4HI | GCNGC | 3 cut(s) | 32, 321, 537 |
| FspBI | CTAG | 1 cut(s) | 386 |
| GluI | GCNGC | 3 cut(s) | 32, 321, 537 |
| HaeIII | GGCC | 3 cut(s) | 5, 165, 292 |
| Hin1II | CATG | 3 cut(s) | 136, 373, 503 |
| HindIII | AAGCTT | 1 cut(s) | 174 |
| HinfI | GANTC | 3 cut(s) | 278, 366, 524 |
| HphI | GGTGA | 1 cut(s) | 412 |
| Hpy166II | GTNNAC | 1 cut(s) | 476 |
| Hpy188I | TCNGA | 2 cut(s) | 149, 217 |
| Hpy188III | TCNNGA | 2 cut(s) | 49, 363 |
| Hpy8I | GTNNAC | 1 cut(s) | 476 |
| HpyAV | CCTTC | 1 cut(s) | 118 |
| HpyCH4V | TGCA | 5 cut(s) | 34, 97, 141, 252, 536 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 452 |
| HpyF3I | CTNAG | 2 cut(s) | 7, 146 |
| Hsp92II | CATG | 3 cut(s) | 136, 373, 503 |
| Kzo9I | GATC | 3 cut(s) | 417, 457, 541 |
| LmnI | GCTCC | 2 cut(s) | 28, 127 |
| LpnPI | CCDG | 3 cut(s) | 90, 117, 492 |
| Lsp1109I | GCAGC | 3 cut(s) | 18, 307, 548 |
| LweI | GCATC | 3 cut(s) | 43, 84, 523 |
| MabI | ACCWGGT | 1 cut(s) | 103 |
| MaeI | CTAG | 1 cut(s) | 386 |
| MaeIII | GTNAC | 1 cut(s) | 308 |
| MalI | GATC | 3 cut(s) | 419, 459, 543 |
| MboI | GATC | 3 cut(s) | 417, 457, 541 |
| MboII | GAAGA | 2 cut(s) | 310, 429 |
| MhlI | GDGCHC | 1 cut(s) | 132 |
| MluCI | AATT | 3 cut(s) | 71, 197, 210 |
| MlyI | GAGTC | 2 cut(s) | 360, 533 |
| MnlI | CCTC | 4 cut(s) | 73, 176, 387, 471 |
| MroXI | GAANNNNTTC | 1 cut(s) | 302 |
| MseI | TTAA | 1 cut(s) | 378 |
| MslI | CAYNNNNRTG | 1 cut(s) | 89 |
| MspR9I | CCNGG | 1 cut(s) | 105 |
| MvaI | CCWGG | 1 cut(s) | 105 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 452 |
| NdeII | GATC | 3 cut(s) | 417, 457, 541 |
| NlaIII | CATG | 3 cut(s) | 136, 373, 503 |
| NmuCI | GTSAC | 1 cut(s) | 308 |
| PaeR7I | CTCGAG | 1 cut(s) | 521 |
| PdmI | GAANNNNTTC | 1 cut(s) | 302 |
| PfeI | GAWTC | 1 cut(s) | 278 |
| PflFI | GACNNNGTC | 1 cut(s) | 401 |
| PkrI | GCNGC | 3 cut(s) | 33, 322, 538 |
| PleI | GAGTC | 2 cut(s) | 360, 532 |
| PpsI | GAGTC | 2 cut(s) | 360, 532 |
| Psp6I | CCWGG | 1 cut(s) | 103 |
| PspGI | CCWGG | 1 cut(s) | 103 |
| PspPI | GGNCC | 1 cut(s) | 291 |
| PspXI | VCTCGAGB | 1 cut(s) | 521 |
| PsyI | GACNNNGTC | 1 cut(s) | 401 |
| RsaI | GTAC | 1 cut(s) | 431 |
| RsaNI | GTAC | 1 cut(s) | 430 |
| RseI | CAYNNNNRTG | 1 cut(s) | 89 |
| SaqAI | TTAA | 1 cut(s) | 378 |
| SatI | GCNGC | 3 cut(s) | 32, 321, 537 |
| Sau3AI | GATC | 3 cut(s) | 417, 457, 541 |
| Sau96I | GGNCC | 1 cut(s) | 291 |
| SchI | GAGTC | 2 cut(s) | 360, 533 |
| ScrFI | CCNGG | 1 cut(s) | 105 |
| SduI | GDGCHC | 1 cut(s) | 132 |
| SetI | ASST | 7 cut(s) | 16, 33, 109, 178, 261, 322, 405 |
| SexAI | ACCWGGT | 1 cut(s) | 103 |
| SfaNI | GCATC | 3 cut(s) | 43, 84, 523 |
| Sfr274I | CTCGAG | 1 cut(s) | 521 |
| SlaI | CTCGAG | 1 cut(s) | 521 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 89 |
| SmlI | CTYRAG | 2 cut(s) | 167, 521 |
| SmoI | CTYRAG | 2 cut(s) | 167, 521 |
| Sse9I | AATT | 3 cut(s) | 71, 197, 210 |
| SspMI | CTAG | 1 cut(s) | 386 |
| StyD4I | CCNGG | 1 cut(s) | 103 |
| TaqI | TCGA | 1 cut(s) | 522 |
| TasI | AATT | 3 cut(s) | 71, 197, 210 |
| TatI | WGTACW | 1 cut(s) | 429 |
| TfiI | GAWTC | 1 cut(s) | 278 |
| Tru1I | TTAA | 1 cut(s) | 378 |
| Tru9I | TTAA | 1 cut(s) | 378 |
| TscAI | CASTG | 2 cut(s) | 486, 551 |
| TseFI | GTSAC | 1 cut(s) | 308 |
| TseI | GCWGC | 3 cut(s) | 31, 320, 536 |
| Tsp45I | GTSAC | 1 cut(s) | 308 |
| TspDTI | ATGAA | 1 cut(s) | 330 |
| TspRI | CASTG | 2 cut(s) | 486, 551 |
| Tth111I | GACNNNGTC | 1 cut(s) | 401 |
| XapI | RAATTY | 1 cut(s) | 197 |
| XhoI | CTCGAG | 1 cut(s) | 521 |
| XmnI | GAANNNNTTC | 1 cut(s) | 302 |
| XspI | CTAG | 1 cut(s) | 386 |