gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 224 |
| AfaI | GTAC | 1 cut(s) | 123 |
| AgsI | TTSAA | 3 cut(s) | 26, 165, 358 |
| AluBI | AGCT | 2 cut(s) | 82, 99 |
| AluI | AGCT | 2 cut(s) | 82, 99 |
| AlwI | GGATC | 1 cut(s) | 224 |
| ApeKI | GCWGC | 1 cut(s) | 371 |
| AspS9I | GGNCC | 1 cut(s) | 380 |
| AsuHPI | GGTGA | 1 cut(s) | 209 |
| AsuII | TTCGAA | 1 cut(s) | 337 |
| AvaII | GGWCC | 1 cut(s) | 380 |
| BbvI | GCAGC | 1 cut(s) | 383 |
| BccI | CCATC | 1 cut(s) | 173 |
| BfaI | CTAG | 1 cut(s) | 144 |
| BfmI | CTRYAG | 1 cut(s) | 369 |
| BisI | GCNGC | 1 cut(s) | 372 |
| BlsI | GCNGC | 1 cut(s) | 373 |
| Bme18I | GGWCC | 1 cut(s) | 380 |
| BmgT120I | GGNCC | 1 cut(s) | 380 |
| Bpu14I | TTCGAA | 1 cut(s) | 337 |
| BpuEI | CTTGAG | 2 cut(s) | 62, 68 |
| Bse3DI | GCAATG | 1 cut(s) | 46 |
| BseMI | GCAATG | 1 cut(s) | 46 |
| BseXI | GCAGC | 1 cut(s) | 383 |
| BseYI | CCCAGC | 1 cut(s) | 247 |
| Bsp119I | TTCGAA | 1 cut(s) | 337 |
| Bsp143I | GATC | 1 cut(s) | 216 |
| BspHI | TCATGA | 1 cut(s) | 297 |
| BspMAI | CTGCAG | 1 cut(s) | 373 |
| BspPI | GGATC | 1 cut(s) | 224 |
| BspT104I | TTCGAA | 1 cut(s) | 337 |
| BsrDI | GCAATG | 1 cut(s) | 46 |
| BssMI | GATC | 1 cut(s) | 216 |
| Bst6I | CTCTTC | 1 cut(s) | 334 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 368 |
| BstBI | TTCGAA | 1 cut(s) | 337 |
| BstKTI | GATC | 1 cut(s) | 219 |
| BstMBI | GATC | 1 cut(s) | 216 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 62, 368 |
| BstNSI | RCATGY | 1 cut(s) | 35 |
| BstSFI | CTRYAG | 1 cut(s) | 369 |
| BstV1I | GCAGC | 1 cut(s) | 383 |
| BstX2I | RGATCY | 1 cut(s) | 216 |
| BstYI | RGATCY | 1 cut(s) | 216 |
| CciI | TCATGA | 1 cut(s) | 297 |
| Cfr13I | GGNCC | 1 cut(s) | 380 |
| Csp6I | GTAC | 1 cut(s) | 122 |
| CviAII | CATG | 3 cut(s) | 32, 298, 384 |
| CviJI | RGCY | 3 cut(s) | 56, 82, 99 |
| CviKI_1 | RGCY | 3 cut(s) | 56, 82, 99 |
| CviQI | GTAC | 1 cut(s) | 122 |
| DpnI | GATC | 1 cut(s) | 218 |
| DpnII | GATC | 1 cut(s) | 216 |
| Eam1104I | CTCTTC | 1 cut(s) | 334 |
| EarI | CTCTTC | 1 cut(s) | 334 |
| Eco47I | GGWCC | 1 cut(s) | 380 |
| FaeI | CATG | 3 cut(s) | 35, 301, 387 |
| FaiI | YATR | 8 cut(s) | 33, 129, 212, 224, 277, 299, 352, 385 |
| FatI | CATG | 3 cut(s) | 31, 297, 383 |
| Fnu4HI | GCNGC | 1 cut(s) | 372 |
| Fsp4HI | GCNGC | 1 cut(s) | 372 |
| FspBI | CTAG | 1 cut(s) | 144 |
| GluI | GCNGC | 1 cut(s) | 372 |
| GsaI | CCCAGC | 1 cut(s) | 251 |
| Hin1II | CATG | 3 cut(s) | 35, 301, 387 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HindIII | AAGCTT | 1 cut(s) | 97 |
| HinfI | GANTC | 2 cut(s) | 238, 326 |
| HphI | GGTGA | 1 cut(s) | 209 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188III | TCNNGA | 2 cut(s) | 165, 298 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyCH4V | TGCA | 2 cut(s) | 31, 371 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 62, 368 |
| Hsp92II | CATG | 3 cut(s) | 35, 301, 387 |
| Kzo9I | GATC | 1 cut(s) | 216 |
| LpnPI | CCDG | 1 cut(s) | 233 |
| Lsp1109I | GCAGC | 1 cut(s) | 383 |
| MaeI | CTAG | 1 cut(s) | 144 |
| MaeIII | GTNAC | 1 cut(s) | 314 |
| MalI | GATC | 1 cut(s) | 218 |
| MboI | GATC | 1 cut(s) | 216 |
| MboII | GAAGA | 1 cut(s) | 321 |
| MfeI | CAATTG | 1 cut(s) | 242 |
| MflI | RGATCY | 1 cut(s) | 216 |
| MluCI | AATT | 3 cut(s) | 232, 242, 281 |
| MlyI | GAGTC | 2 cut(s) | 247, 320 |
| MnlI | CCTC | 1 cut(s) | 86 |
| MseI | TTAA | 2 cut(s) | 140, 152 |
| MunI | CAATTG | 1 cut(s) | 242 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 62, 368 |
| NdeII | GATC | 1 cut(s) | 216 |
| NlaIII | CATG | 3 cut(s) | 35, 301, 387 |
| NspI | RCATGY | 1 cut(s) | 35 |
| NspV | TTCGAA | 1 cut(s) | 337 |
| PagI | TCATGA | 1 cut(s) | 297 |
| PkrI | GCNGC | 1 cut(s) | 373 |
| PleI | GAGTC | 2 cut(s) | 246, 320 |
| PpsI | GAGTC | 2 cut(s) | 246, 320 |
| PspFI | CCCAGC | 1 cut(s) | 247 |
| PspPI | GGNCC | 1 cut(s) | 380 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 114, 146 |
| PstI | CTGCAG | 1 cut(s) | 373 |
| PsuI | RGATCY | 1 cut(s) | 216 |
| RsaI | GTAC | 1 cut(s) | 123 |
| RsaNI | GTAC | 1 cut(s) | 122 |
| SaqAI | TTAA | 2 cut(s) | 140, 152 |
| SatI | GCNGC | 1 cut(s) | 372 |
| Sau3AI | GATC | 1 cut(s) | 216 |
| Sau96I | GGNCC | 1 cut(s) | 380 |
| SchI | GAGTC | 2 cut(s) | 247, 320 |
| SetI | ASST | 5 cut(s) | 78, 84, 101, 149, 350 |
| SfcI | CTRYAG | 1 cut(s) | 369 |
| SfuI | TTCGAA | 1 cut(s) | 337 |
| SinI | GGWCC | 1 cut(s) | 380 |
| SmlI | CTYRAG | 2 cut(s) | 77, 83 |
| SmoI | CTYRAG | 2 cut(s) | 77, 83 |
| Sse9I | AATT | 3 cut(s) | 232, 242, 281 |
| SspMI | CTAG | 1 cut(s) | 144 |
| TaqI | TCGA | 1 cut(s) | 337 |
| TasI | AATT | 3 cut(s) | 232, 242, 281 |
| TatI | WGTACW | 1 cut(s) | 121 |
| Tru1I | TTAA | 2 cut(s) | 140, 152 |
| Tru9I | TTAA | 2 cut(s) | 140, 152 |
| TseI | GCWGC | 1 cut(s) | 371 |
| TspDTI | ATGAA | 5 cut(s) | 30, 219, 239, 314, 356 |
| VpaK11BI | GGWCC | 1 cut(s) | 380 |
| XceI | RCATGY | 1 cut(s) | 35 |
| XspI | CTAG | 1 cut(s) | 144 |