Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 2 - 45 | 1.5e-10 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 188 |
| AclWI | GGATC | 1 cut(s) | 353 |
| AcsI | RAATTY | 1 cut(s) | 84 |
| AcuI | CTGAAG | 1 cut(s) | 240 |
| AgsI | TTSAA | 4 cut(s) | 64, 98, 188, 237 |
| AjnI | CCWGG | 1 cut(s) | 179 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 56, 88 |
| AluBI | AGCT | 2 cut(s) | 56, 158 |
| AluI | AGCT | 2 cut(s) | 56, 158 |
| AlwI | GGATC | 1 cut(s) | 353 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 2 cut(s) | 218, 221 |
| ApoI | RAATTY | 1 cut(s) | 84 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 143, 175 |
| BbvI | GCAGC | 2 cut(s) | 230, 233 |
| BccI | CCATC | 1 cut(s) | 406 |
| BciT130I | CCWGG | 1 cut(s) | 181 |
| BfaI | CTAG | 2 cut(s) | 264, 426 |
| BfuAI | ACCTGC | 1 cut(s) | 188 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 11 |
| BisI | GCNGC | 2 cut(s) | 219, 222 |
| BlsI | GCNGC | 2 cut(s) | 220, 223 |
| Bme1390I | CCNGG | 1 cut(s) | 181 |
| BmrFI | CCNGG | 1 cut(s) | 181 |
| BmsI | GCATC | 2 cut(s) | 269, 424 |
| BsaJI | CCNNGG | 1 cut(s) | 6 |
| Bse1I | ACTGG | 1 cut(s) | 380 |
| BseBI | CCWGG | 1 cut(s) | 181 |
| BseDI | CCNNGG | 1 cut(s) | 6 |
| BseGI | GGATG | 1 cut(s) | 49 |
| BseNI | ACTGG | 1 cut(s) | 380 |
| BseXI | GCAGC | 2 cut(s) | 230, 233 |
| BsgI | GTGCAG | 1 cut(s) | 17 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 358 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspHI | TCATGA | 1 cut(s) | 202 |
| BspMI | ACCTGC | 1 cut(s) | 188 |
| BspPI | GGATC | 1 cut(s) | 353 |
| BsrI | ACTGG | 1 cut(s) | 380 |
| BssECI | CCNNGG | 1 cut(s) | 6 |
| BssMI | GATC | 1 cut(s) | 358 |
| BssT1I | CCWWGG | 1 cut(s) | 6 |
| Bst2UI | CCWGG | 1 cut(s) | 181 |
| BstF5I | GGATG | 1 cut(s) | 49 |
| BstKTI | GATC | 1 cut(s) | 361 |
| BstMBI | GATC | 1 cut(s) | 358 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 11 |
| BstNI | CCWGG | 1 cut(s) | 181 |
| BstNSI | RCATGY | 2 cut(s) | 94, 404 |
| BstSCI | CCNGG | 1 cut(s) | 179 |
| BstV1I | GCAGC | 2 cut(s) | 230, 233 |
| BstX2I | RGATCY | 1 cut(s) | 358 |
| BstYI | RGATCY | 1 cut(s) | 358 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 49 |
| BveI | ACCTGC | 1 cut(s) | 188 |
| CciI | TCATGA | 1 cut(s) | 202 |
| CviAII | CATG | 3 cut(s) | 91, 203, 401 |
| CviJI | RGCY | 4 cut(s) | 5, 56, 158, 374 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 56, 158, 374 |
| DpnI | GATC | 1 cut(s) | 360 |
| DpnII | GATC | 1 cut(s) | 358 |
| Eco130I | CCWWGG | 1 cut(s) | 6 |
| Eco57I | CTGAAG | 1 cut(s) | 240 |
| EcoRII | CCWGG | 1 cut(s) | 179 |
| EcoT14I | CCWWGG | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 6 |
| FaeI | CATG | 3 cut(s) | 94, 206, 404 |
| FaiI | YATR | 8 cut(s) | 21, 92, 111, 155, 173, 204, 272, 402 |
| FatI | CATG | 3 cut(s) | 90, 202, 400 |
| Fnu4HI | GCNGC | 2 cut(s) | 219, 222 |
| FokI | GGATG | 1 cut(s) | 56 |
| Fsp4HI | GCNGC | 2 cut(s) | 219, 222 |
| FspBI | CTAG | 2 cut(s) | 264, 426 |
| GluI | GCNGC | 2 cut(s) | 219, 222 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 94, 206, 404 |
| Hpy188III | TCNNGA | 2 cut(s) | 203, 264 |
| HpyAV | CCTTC | 1 cut(s) | 98 |
| HpyCH4V | TGCA | 4 cut(s) | 34, 141, 164, 197 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 11 |
| Hsp92II | CATG | 3 cut(s) | 94, 206, 404 |
| Kzo9I | GATC | 1 cut(s) | 358 |
| LmnI | GCTCC | 1 cut(s) | 397 |
| LpnPI | CCDG | 6 cut(s) | 114, 162, 166, 183, 193, 393 |
| Lsp1109I | GCAGC | 2 cut(s) | 230, 233 |
| LweI | GCATC | 2 cut(s) | 269, 424 |
| MaeI | CTAG | 2 cut(s) | 264, 426 |
| MalI | GATC | 1 cut(s) | 360 |
| MboI | GATC | 1 cut(s) | 358 |
| MboII | GAAGA | 3 cut(s) | 92, 343, 421 |
| MfeI | CAATTG | 1 cut(s) | 350 |
| MflI | RGATCY | 1 cut(s) | 358 |
| MluCI | AATT | 3 cut(s) | 84, 324, 350 |
| MnlI | CCTC | 1 cut(s) | 70 |
| MseI | TTAA | 1 cut(s) | 439 |
| MslI | CAYNNNNRTG | 1 cut(s) | 275 |
| MspR9I | CCNGG | 1 cut(s) | 181 |
| MunI | CAATTG | 1 cut(s) | 350 |
| MvaI | CCWGG | 1 cut(s) | 181 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 11 |
| NdeII | GATC | 1 cut(s) | 358 |
| NlaIII | CATG | 3 cut(s) | 94, 206, 404 |
| NspI | RCATGY | 2 cut(s) | 94, 404 |
| PagI | TCATGA | 1 cut(s) | 202 |
| PkrI | GCNGC | 2 cut(s) | 220, 223 |
| Psp6I | CCWGG | 1 cut(s) | 179 |
| PspGI | CCWGG | 1 cut(s) | 179 |
| PsuI | RGATCY | 1 cut(s) | 358 |
| RseI | CAYNNNNRTG | 1 cut(s) | 275 |
| SaqAI | TTAA | 1 cut(s) | 439 |
| SatI | GCNGC | 2 cut(s) | 219, 222 |
| Sau3AI | GATC | 1 cut(s) | 358 |
| ScrFI | CCNGG | 1 cut(s) | 181 |
| SetI | ASST | 5 cut(s) | 58, 151, 160, 185, 202 |
| SfaNI | GCATC | 2 cut(s) | 269, 424 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 275 |
| Sse9I | AATT | 3 cut(s) | 84, 324, 350 |
| SspMI | CTAG | 2 cut(s) | 264, 426 |
| StyD4I | CCNGG | 1 cut(s) | 179 |
| StyI | CCWWGG | 1 cut(s) | 6 |
| TasI | AATT | 3 cut(s) | 84, 324, 350 |
| Tru1I | TTAA | 1 cut(s) | 439 |
| Tru9I | TTAA | 1 cut(s) | 439 |
| TseI | GCWGC | 2 cut(s) | 218, 221 |
| XapI | RAATTY | 1 cut(s) | 84 |
| XbaI | TCTAGA | 1 cut(s) | 263 |
| XceI | RCATGY | 2 cut(s) | 94, 404 |
| XspI | CTAG | 2 cut(s) | 264, 426 |