Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 2 - 47 | 1.5e-10 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 389 |
| AcuI | CTGAAG | 1 cut(s) | 123 |
| AfaI | GTAC | 4 cut(s) | 142, 239, 376, 463 |
| AflII | CTTAAG | 1 cut(s) | 232 |
| AgsI | TTSAA | 2 cut(s) | 64, 316 |
| AjnI | CCWGG | 2 cut(s) | 118, 196 |
| AluBI | AGCT | 4 cut(s) | 179, 218, 355, 416 |
| AluI | AGCT | 4 cut(s) | 179, 218, 355, 416 |
| Alw26I | GTCTC | 2 cut(s) | 63, 88 |
| AlwI | GGATC | 1 cut(s) | 389 |
| AoxI | GGCC | 1 cut(s) | 3 |
| AsuHPI | GGTGA | 1 cut(s) | 352 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 462 |
| BbsI | GAAGAC | 1 cut(s) | 56 |
| BciT130I | CCWGG | 2 cut(s) | 120, 198 |
| BciVI | GTATCC | 1 cut(s) | 463 |
| BcoDI | GTCTC | 2 cut(s) | 63, 88 |
| BfaI | CTAG | 3 cut(s) | 144, 180, 481 |
| BfrI | CTTAAG | 1 cut(s) | 232 |
| BfuI | GTATCC | 1 cut(s) | 463 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 11 |
| Bme1390I | CCNGG | 2 cut(s) | 120, 198 |
| BmrFI | CCNGG | 2 cut(s) | 120, 198 |
| BpiI | GAAGAC | 1 cut(s) | 56 |
| Bpu10I | CCTNAGC | 1 cut(s) | 412 |
| BpuEI | CTTGAG | 1 cut(s) | 420 |
| BsaAI | YACGTR | 1 cut(s) | 461 |
| Bse1I | ACTGG | 2 cut(s) | 215, 385 |
| BseBI | CCWGG | 2 cut(s) | 120, 198 |
| BseGI | GGATG | 1 cut(s) | 49 |
| BseNI | ACTGG | 2 cut(s) | 215, 385 |
| BseRI | GAGGAG | 1 cut(s) | 95 |
| BseYI | CCCAGC | 1 cut(s) | 218 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsmAI | GTCTC | 2 cut(s) | 63, 88 |
| BsmI | GAATGC | 1 cut(s) | 453 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 2 cut(s) | 287, 394 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspPI | GGATC | 1 cut(s) | 389 |
| BspTI | CTTAAG | 1 cut(s) | 232 |
| BsrI | ACTGG | 2 cut(s) | 215, 385 |
| BssMI | GATC | 2 cut(s) | 287, 394 |
| Bst2UI | CCWGG | 2 cut(s) | 120, 198 |
| BstAFI | CTTAAG | 1 cut(s) | 232 |
| BstBAI | YACGTR | 1 cut(s) | 461 |
| BstDEI | CTNAG | 5 cut(s) | 7, 73, 133, 300, 412 |
| BstF5I | GGATG | 1 cut(s) | 49 |
| BstKTI | GATC | 2 cut(s) | 290, 397 |
| BstMAI | GTCTC | 2 cut(s) | 63, 88 |
| BstMBI | GATC | 2 cut(s) | 287, 394 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 352 |
| BstNI | CCWGG | 2 cut(s) | 120, 198 |
| BstSCI | CCNGG | 2 cut(s) | 118, 196 |
| BstSNI | TACGTA | 1 cut(s) | 461 |
| BstV2I | GAAGAC | 1 cut(s) | 56 |
| BsuI | GTATCC | 1 cut(s) | 463 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 49 |
| BtsIMutI | CAGTG | 1 cut(s) | 208 |
| Csp6I | GTAC | 4 cut(s) | 141, 238, 375, 462 |
| CviAII | CATG | 3 cut(s) | 25, 91, 203 |
| CviJI | RGCY | 8 cut(s) | 5, 118, 158, 179, 218, 355, 392, 416 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 118, 158, 179, 218, 355, 392, 416 |
| CviQI | GTAC | 4 cut(s) | 141, 238, 375, 462 |
| DdeI | CTNAG | 5 cut(s) | 7, 73, 133, 300, 412 |
| DpnI | GATC | 2 cut(s) | 289, 396 |
| DpnII | GATC | 2 cut(s) | 287, 394 |
| Eco105I | TACGTA | 1 cut(s) | 461 |
| Eco32I | GATATC | 1 cut(s) | 361 |
| Eco57I | CTGAAG | 1 cut(s) | 123 |
| EcoRII | CCWGG | 2 cut(s) | 118, 196 |
| EcoRV | GATATC | 1 cut(s) | 361 |
| FaeI | CATG | 3 cut(s) | 28, 94, 206 |
| FaiI | YATR | 8 cut(s) | 26, 88, 92, 173, 204, 306, 324, 348 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 215, 247 |
| FatI | CATG | 3 cut(s) | 24, 90, 202 |
| FokI | GGATG | 1 cut(s) | 56 |
| FspBI | CTAG | 3 cut(s) | 144, 180, 481 |
| GsaI | CCCAGC | 1 cut(s) | 222 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 28, 94, 206 |
| HphI | GGTGA | 1 cut(s) | 352 |
| Hpy166II | GTNNAC | 1 cut(s) | 265 |
| Hpy188III | TCNNGA | 2 cut(s) | 61, 364 |
| Hpy8I | GTNNAC | 1 cut(s) | 265 |
| HpyAV | CCTTC | 1 cut(s) | 98 |
| HpyCH4IV | ACGT | 1 cut(s) | 460 |
| HpyCH4V | TGCA | 4 cut(s) | 34, 244, 260, 422 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 352 |
| HpyF3I | CTNAG | 5 cut(s) | 7, 73, 133, 300, 412 |
| HpySE526I | ACGT | 1 cut(s) | 460 |
| Hsp92II | CATG | 3 cut(s) | 28, 94, 206 |
| Kzo9I | GATC | 2 cut(s) | 287, 394 |
| LmnI | GCTCC | 1 cut(s) | 352 |
| MaeI | CTAG | 3 cut(s) | 144, 180, 481 |
| MaeII | ACGT | 1 cut(s) | 460 |
| MalI | GATC | 2 cut(s) | 289, 396 |
| MboI | GATC | 2 cut(s) | 287, 394 |
| MboII | GAAGA | 3 cut(s) | 61, 235, 379 |
| MluCI | AATT | 2 cut(s) | 29, 255 |
| MnlI | CCTC | 1 cut(s) | 73 |
| MseI | TTAA | 1 cut(s) | 233 |
| MspCI | CTTAAG | 1 cut(s) | 232 |
| MspR9I | CCNGG | 2 cut(s) | 120, 198 |
| Mva1269I | GAATGC | 1 cut(s) | 453 |
| MvaI | CCWGG | 2 cut(s) | 120, 198 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 352 |
| NdeII | GATC | 2 cut(s) | 287, 394 |
| NlaIII | CATG | 3 cut(s) | 28, 94, 206 |
| PctI | GAATGC | 1 cut(s) | 453 |
| PfoI | TCCNGGA | 1 cut(s) | 196 |
| Ppu21I | YACGTR | 1 cut(s) | 461 |
| Psp6I | CCWGG | 2 cut(s) | 118, 196 |
| PspFI | CCCAGC | 1 cut(s) | 218 |
| PspGI | CCWGG | 2 cut(s) | 118, 196 |
| RsaI | GTAC | 4 cut(s) | 142, 239, 376, 463 |
| RsaNI | GTAC | 4 cut(s) | 141, 238, 375, 462 |
| SaqAI | TTAA | 1 cut(s) | 233 |
| Sau3AI | GATC | 2 cut(s) | 287, 394 |
| ScrFI | CCNGG | 2 cut(s) | 120, 198 |
| SmlI | CTYRAG | 2 cut(s) | 232, 435 |
| SmoI | CTYRAG | 2 cut(s) | 232, 435 |
| SnaBI | TACGTA | 1 cut(s) | 461 |
| Sse9I | AATT | 2 cut(s) | 29, 255 |
| SspI | AATATT | 1 cut(s) | 320 |
| SspMI | CTAG | 3 cut(s) | 144, 180, 481 |
| StyD4I | CCNGG | 2 cut(s) | 118, 196 |
| TaiI | ACGT | 1 cut(s) | 463 |
| TaqI | TCGA | 1 cut(s) | 21 |
| TasI | AATT | 2 cut(s) | 29, 255 |
| TatI | WGTACW | 1 cut(s) | 140 |
| Tru1I | TTAA | 1 cut(s) | 233 |
| Tru9I | TTAA | 1 cut(s) | 233 |
| TscAI | CASTG | 1 cut(s) | 215 |
| TspDTI | ATGAA | 1 cut(s) | 219 |
| TspRI | CASTG | 1 cut(s) | 215 |
| Vha464I | CTTAAG | 1 cut(s) | 232 |
| XspI | CTAG | 3 cut(s) | 144, 180, 481 |