Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 2 - 92 | 5.6e-20 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 19 |
| AfaI | GTAC | 1 cut(s) | 391 |
| AflII | CTTAAG | 1 cut(s) | 481 |
| AgsI | TTSAA | 5 cut(s) | 108, 219, 229, 239, 437 |
| AjnI | CCWGG | 2 cut(s) | 256, 445 |
| AluBI | AGCT | 3 cut(s) | 369, 428, 467 |
| AluI | AGCT | 3 cut(s) | 369, 428, 467 |
| ApeKI | GCWGC | 2 cut(s) | 79, 82 |
| ApoI | RAATTY | 1 cut(s) | 19 |
| AsuHPI | GGTGA | 1 cut(s) | 293 |
| BbsI | GAAGAC | 1 cut(s) | 336 |
| BbvI | GCAGC | 2 cut(s) | 66, 69 |
| BciT130I | CCWGG | 2 cut(s) | 258, 447 |
| BfaI | CTAG | 5 cut(s) | 168, 191, 354, 393, 429 |
| BfmI | CTRYAG | 1 cut(s) | 83 |
| BfrI | CTTAAG | 1 cut(s) | 481 |
| BisI | GCNGC | 2 cut(s) | 80, 83 |
| BlsI | GCNGC | 2 cut(s) | 81, 84 |
| Bme1390I | CCNGG | 2 cut(s) | 258, 447 |
| BmrFI | CCNGG | 2 cut(s) | 258, 447 |
| BpiI | GAAGAC | 1 cut(s) | 336 |
| BpmI | CTGGAG | 1 cut(s) | 240 |
| BpuEI | CTTGAG | 1 cut(s) | 366 |
| Bse1I | ACTGG | 1 cut(s) | 464 |
| BseBI | CCWGG | 2 cut(s) | 258, 447 |
| BseGI | GGATG | 1 cut(s) | 52 |
| BseNI | ACTGG | 1 cut(s) | 464 |
| BseXI | GCAGC | 2 cut(s) | 66, 69 |
| BseYI | CCCAGC | 1 cut(s) | 467 |
| BspMAI | CTGCAG | 1 cut(s) | 87 |
| BspTI | CTTAAG | 1 cut(s) | 481 |
| BsrI | ACTGG | 1 cut(s) | 464 |
| Bst2UI | CCWGG | 2 cut(s) | 258, 447 |
| Bst6I | CTCTTC | 2 cut(s) | 224, 332 |
| BstAFI | CTTAAG | 1 cut(s) | 481 |
| BstC8I | GCNNGC | 1 cut(s) | 64 |
| BstDEI | CTNAG | 1 cut(s) | 276 |
| BstF5I | GGATG | 1 cut(s) | 52 |
| BstNI | CCWGG | 2 cut(s) | 258, 447 |
| BstSCI | CCNGG | 2 cut(s) | 256, 445 |
| BstSFI | CTRYAG | 1 cut(s) | 83 |
| BstV1I | GCAGC | 2 cut(s) | 66, 69 |
| BstV2I | GAAGAC | 1 cut(s) | 336 |
| BtsCI | GGATG | 1 cut(s) | 52 |
| BtsIMutI | CAGTG | 3 cut(s) | 16, 66, 457 |
| Cac8I | GCNNGC | 1 cut(s) | 64 |
| Csp6I | GTAC | 1 cut(s) | 390 |
| CviAII | CATG | 1 cut(s) | 334 |
| CviJI | RGCY | 7 cut(s) | 79, 140, 358, 369, 407, 428, 467 |
| CviKI_1 | RGCY | 7 cut(s) | 79, 140, 358, 369, 407, 428, 467 |
| CviQI | GTAC | 1 cut(s) | 390 |
| DdeI | CTNAG | 1 cut(s) | 276 |
| Eam1104I | CTCTTC | 2 cut(s) | 224, 332 |
| EarI | CTCTTC | 2 cut(s) | 224, 332 |
| EcoRII | CCWGG | 2 cut(s) | 256, 445 |
| EcoT22I | ATGCAT | 1 cut(s) | 246 |
| FaeI | CATG | 1 cut(s) | 337 |
| FaiI | YATR | 9 cut(s) | 42, 122, 213, 246, 272, 335, 349, 378, 422 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 464 |
| FatI | CATG | 1 cut(s) | 333 |
| Fnu4HI | GCNGC | 2 cut(s) | 80, 83 |
| FokI | GGATG | 1 cut(s) | 59 |
| Fsp4HI | GCNGC | 2 cut(s) | 80, 83 |
| FspBI | CTAG | 5 cut(s) | 168, 191, 354, 393, 429 |
| GluI | GCNGC | 2 cut(s) | 80, 83 |
| GsaI | CCCAGC | 1 cut(s) | 471 |
| GsuI | CTGGAG | 1 cut(s) | 240 |
| Hin1II | CATG | 1 cut(s) | 337 |
| HinfI | GANTC | 1 cut(s) | 298 |
| HphI | GGTGA | 1 cut(s) | 293 |
| Hpy166II | GTNNAC | 1 cut(s) | 344 |
| Hpy8I | GTNNAC | 1 cut(s) | 344 |
| HpyCH4V | TGCA | 3 cut(s) | 85, 244, 413 |
| HpyF3I | CTNAG | 1 cut(s) | 276 |
| Hsp92II | CATG | 1 cut(s) | 337 |
| LmnI | GCTCC | 1 cut(s) | 366 |
| LpnPI | CCDG | 9 cut(s) | 71, 137, 243, 270, 411, 432, 445, 453, 459 |
| Lsp1109I | GCAGC | 2 cut(s) | 66, 69 |
| MaeI | CTAG | 5 cut(s) | 168, 191, 354, 393, 429 |
| MboII | GAAGA | 4 cut(s) | 241, 341, 349, 484 |
| MluCI | AATT | 4 cut(s) | 19, 112, 208, 247 |
| MlyI | GAGTC | 1 cut(s) | 307 |
| MnlI | CCTC | 1 cut(s) | 130 |
| Mph1103I | ATGCAT | 1 cut(s) | 246 |
| MseI | TTAA | 1 cut(s) | 482 |
| MspCI | CTTAAG | 1 cut(s) | 481 |
| MspR9I | CCNGG | 2 cut(s) | 258, 447 |
| MvaI | CCWGG | 2 cut(s) | 258, 447 |
| NlaIII | CATG | 1 cut(s) | 337 |
| NsiI | ATGCAT | 1 cut(s) | 246 |
| PfoI | TCCNGGA | 2 cut(s) | 256, 445 |
| PkrI | GCNGC | 2 cut(s) | 81, 84 |
| PleI | GAGTC | 1 cut(s) | 306 |
| PpsI | GAGTC | 1 cut(s) | 306 |
| Psp6I | CCWGG | 2 cut(s) | 256, 445 |
| PspFI | CCCAGC | 1 cut(s) | 467 |
| PspGI | CCWGG | 2 cut(s) | 256, 445 |
| PstI | CTGCAG | 1 cut(s) | 87 |
| RsaI | GTAC | 1 cut(s) | 391 |
| RsaNI | GTAC | 1 cut(s) | 390 |
| SaqAI | TTAA | 1 cut(s) | 482 |
| SatI | GCNGC | 2 cut(s) | 80, 83 |
| SchI | GAGTC | 1 cut(s) | 307 |
| ScrFI | CCNGG | 2 cut(s) | 258, 447 |
| SetI | ASST | 5 cut(s) | 371, 400, 430, 434, 469 |
| SfcI | CTRYAG | 1 cut(s) | 83 |
| SmlI | CTYRAG | 2 cut(s) | 381, 481 |
| SmoI | CTYRAG | 2 cut(s) | 381, 481 |
| Sse9I | AATT | 4 cut(s) | 19, 112, 208, 247 |
| SspI | AATATT | 1 cut(s) | 98 |
| SspMI | CTAG | 5 cut(s) | 168, 191, 354, 393, 429 |
| StyD4I | CCNGG | 2 cut(s) | 256, 445 |
| TasI | AATT | 4 cut(s) | 19, 112, 208, 247 |
| TatI | WGTACW | 1 cut(s) | 389 |
| Tru1I | TTAA | 1 cut(s) | 482 |
| Tru9I | TTAA | 1 cut(s) | 482 |
| TscAI | CASTG | 3 cut(s) | 16, 73, 464 |
| TseI | GCWGC | 2 cut(s) | 79, 82 |
| TspDTI | ATGAA | 3 cut(s) | 17, 137, 350 |
| TspRI | CASTG | 3 cut(s) | 16, 73, 464 |
| Vha464I | CTTAAG | 1 cut(s) | 481 |
| XapI | RAATTY | 1 cut(s) | 19 |
| XspI | CTAG | 5 cut(s) | 168, 191, 354, 393, 429 |
| Zsp2I | ATGCAT | 1 cut(s) | 246 |