Reverse transcriptase (RNA-dependent DNA polymerase)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 4 - 95 | 6e-17 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 282 |
| AfaI | GTAC | 1 cut(s) | 127 |
| AgsI | TTSAA | 7 cut(s) | 37, 95, 137, 236, 247, 256, 287 |
| AluBI | AGCT | 1 cut(s) | 205 |
| AluI | AGCT | 1 cut(s) | 205 |
| Alw26I | GTCTC | 2 cut(s) | 183, 222 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 251 |
| AsuHPI | GGTGA | 1 cut(s) | 311 |
| BaeGI | GKGCMC | 1 cut(s) | 326 |
| BcoDI | GTCTC | 2 cut(s) | 183, 222 |
| BmcAI | AGTACT | 1 cut(s) | 127 |
| BmsI | GCATC | 1 cut(s) | 21 |
| Bsa29I | ATCGAT | 1 cut(s) | 345 |
| BseCI | ATCGAT | 1 cut(s) | 345 |
| BseGI | GGATG | 2 cut(s) | 10, 70 |
| BseMII | CTCAG | 1 cut(s) | 233 |
| BseSI | GKGCMC | 1 cut(s) | 326 |
| BshVI | ATCGAT | 1 cut(s) | 345 |
| BsmAI | GTCTC | 2 cut(s) | 183, 222 |
| Bsp1286I | GDGCHC | 1 cut(s) | 326 |
| Bsp143I | GATC | 3 cut(s) | 316, 342, 346 |
| BspCNI | CTCAG | 1 cut(s) | 232 |
| BspDI | ATCGAT | 1 cut(s) | 345 |
| BssMI | GATC | 3 cut(s) | 316, 342, 346 |
| Bst4CI | ACNGT | 2 cut(s) | 118, 216 |
| BstC8I | GCNNGC | 1 cut(s) | 78 |
| BstDEI | CTNAG | 1 cut(s) | 219 |
| BstF5I | GGATG | 2 cut(s) | 10, 70 |
| BstKTI | GATC | 3 cut(s) | 319, 345, 349 |
| BstMAI | GTCTC | 2 cut(s) | 183, 222 |
| BstMBI | GATC | 3 cut(s) | 316, 342, 346 |
| BstSLI | GKGCMC | 1 cut(s) | 326 |
| Bsu15I | ATCGAT | 1 cut(s) | 345 |
| BsuTUI | ATCGAT | 1 cut(s) | 345 |
| BtsCI | GGATG | 2 cut(s) | 10, 70 |
| BtsIMutI | CAGTG | 1 cut(s) | 326 |
| Cac8I | GCNNGC | 1 cut(s) | 78 |
| ClaI | ATCGAT | 1 cut(s) | 345 |
| Csp6I | GTAC | 1 cut(s) | 126 |
| CviAII | CATG | 1 cut(s) | 259 |
| CviJI | RGCY | 2 cut(s) | 205, 228 |
| CviKI_1 | RGCY | 2 cut(s) | 205, 228 |
| CviQI | GTAC | 1 cut(s) | 126 |
| DdeI | CTNAG | 1 cut(s) | 219 |
| DpnI | GATC | 3 cut(s) | 318, 344, 348 |
| DpnII | GATC | 3 cut(s) | 316, 342, 346 |
| DraI | TTTAAA | 1 cut(s) | 21 |
| FaeI | CATG | 1 cut(s) | 262 |
| FaiI | YATR | 3 cut(s) | 60, 165, 260 |
| FatI | CATG | 1 cut(s) | 258 |
| FokI | GGATG | 2 cut(s) | 17, 77 |
| Hin1II | CATG | 1 cut(s) | 262 |
| HindIII | AAGCTT | 1 cut(s) | 203 |
| HinfI | GANTC | 1 cut(s) | 252 |
| HphI | GGTGA | 1 cut(s) | 311 |
| Hpy166II | GTNNAC | 1 cut(s) | 309 |
| Hpy188I | TCNGA | 1 cut(s) | 222 |
| Hpy8I | GTNNAC | 1 cut(s) | 309 |
| HpyAV | CCTTC | 1 cut(s) | 136 |
| HpyCH4III | ACNGT | 2 cut(s) | 118, 216 |
| HpyCH4IV | ACGT | 1 cut(s) | 282 |
| HpyCH4V | TGCA | 3 cut(s) | 12, 80, 270 |
| HpyF3I | CTNAG | 1 cut(s) | 219 |
| HpySE526I | ACGT | 1 cut(s) | 282 |
| Hsp92II | CATG | 1 cut(s) | 262 |
| Kzo9I | GATC | 3 cut(s) | 316, 342, 346 |
| LpnPI | CCDG | 1 cut(s) | 35 |
| LweI | GCATC | 1 cut(s) | 21 |
| MaeII | ACGT | 1 cut(s) | 282 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MalI | GATC | 3 cut(s) | 318, 344, 348 |
| MboI | GATC | 3 cut(s) | 316, 342, 346 |
| MhlI | GDGCHC | 1 cut(s) | 326 |
| MluCI | AATT | 1 cut(s) | 95 |
| MroXI | GAANNNNTTC | 1 cut(s) | 251 |
| MseI | TTAA | 4 cut(s) | 20, 102, 122, 291 |
| NdeII | GATC | 3 cut(s) | 316, 342, 346 |
| NlaIII | CATG | 1 cut(s) | 262 |
| NmuCI | GTSAC | 1 cut(s) | 299 |
| PdmI | GAANNNNTTC | 1 cut(s) | 251 |
| PfeI | GAWTC | 1 cut(s) | 252 |
| Psp1406I | AACGTT | 1 cut(s) | 282 |
| RsaI | GTAC | 1 cut(s) | 127 |
| RsaNI | GTAC | 1 cut(s) | 126 |
| SaqAI | TTAA | 4 cut(s) | 20, 102, 122, 291 |
| Sau3AI | GATC | 3 cut(s) | 316, 342, 346 |
| ScaI | AGTACT | 1 cut(s) | 127 |
| SduI | GDGCHC | 1 cut(s) | 326 |
| SetI | ASST | 3 cut(s) | 207, 285, 301 |
| SfaNI | GCATC | 1 cut(s) | 21 |
| Sse9I | AATT | 1 cut(s) | 95 |
| TaaI | ACNGT | 2 cut(s) | 118, 216 |
| TaiI | ACGT | 1 cut(s) | 285 |
| TaqI | TCGA | 1 cut(s) | 345 |
| TasI | AATT | 1 cut(s) | 95 |
| TatI | WGTACW | 1 cut(s) | 125 |
| TfiI | GAWTC | 1 cut(s) | 252 |
| Tru1I | TTAA | 4 cut(s) | 20, 102, 122, 291 |
| Tru9I | TTAA | 4 cut(s) | 20, 102, 122, 291 |
| TscAI | CASTG | 1 cut(s) | 326 |
| TseFI | GTSAC | 1 cut(s) | 299 |
| Tsp45I | GTSAC | 1 cut(s) | 299 |
| TspDTI | ATGAA | 2 cut(s) | 31, 155 |
| TspRI | CASTG | 1 cut(s) | 326 |
| XmnI | GAANNNNTTC | 1 cut(s) | 251 |
| ZrmI | AGTACT | 1 cut(s) | 127 |