Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0001294

Physical Location & Seq

Genomic Coordinates Forward (+)

7606992 .. 7608357

Gene Structure 1366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G098900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGAAAAGAAAGTCCGAACAAGAAGAATTTGAAGAATTTGAAGAAGAGAAAAAACAGAGGATTTGGAGTCATGGAGAGCACTGGCTGAGAGGGGAGATGGTTGGAGAAGGAAGCTCTGGTTCTGTTTTTCTTGCCACTCCCAAAAACCCAAGAAGGGGTGAGTTTGGTAGCATGCTAAACTTTCCGGGATTGATGGCGGTGAAATCGGCAGAGGTCTCTGATTCGGAGTCAATCCGGCATGAGGCAGAGGTTCTGTTGGACATTAAGGGTTGCCCTTTTGTCATTGAGCGTTTTGGTGAAGAAATCACAACCAGTGAAGAGGGTGGTGATCACATGGTCTATAACTTGTTGCTGGAATTTGCCTCTGGAGGAACTCTTGGTGATCTGATTGAGAAATCCAACGGTCATGGATTGCCTGAAGCTGAAGTTAGAAGGTATACGAGGTCGATACTTGAAGGGATTAAGCATATTCACAAGTTTGATTATGTTCACTGTGATTTGAAGCCGGAAAACATTCTGCTTGTACCAAATCCTGCAACTAGTACTGGTAGTTTTGTGGCTAAGATTTCAGATTTTGGATTGGCTAAGAAAACCAAGGAGAATTACGGTCAATGGAGAGGCACTCCTACGTATCTGTCCCCAGAAGCCTTAAATGACAGTGAGCAGGAGCCGCCCTCTGATATATGGTCTCTTGGTTGTATCGTACTTGAGATGCTAACCGGCAAGTCCTTCTCAGATTTAAAGCCTGGTTGTGAACTTGAAGATTTCCACTATATGTTTCATCACGTATGTACTCCCAAAATCCCTGCTGAAGTCTCTGGTGTGGCCAGGGATTTTCTTAAGAGTTGTCTTGCCATGAGGTCTTGCGAAAGGCTGACCGCTGAAAAGCTCTTGCTTCATCAATTCGTTATACGGCCAAAGCCATCGAAAGCAGCTCGTCATACAAAGGGGAAGGTGGTTTGCTCATCTTCAGGCTATGCAGATGGCTCCAAACCAAGTGCAGATTGTCACGCAAGCTCTGCCATTGTTCGCAGAATTCCGCCACCACCTGGTTTTGAGATACTTGCTGCTCTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

360

Amino Acids

39.82

Weight (kDa)

5.91

Isoelectric Point (pI)

51.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001294)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g22070 FvH4_5g34520 FvH4_5g34890 FvH4_7g15420
malus_domestica	MD02G1267200.v1.1 MD11G1159500.v1.1 MD12G1002200.v1.1 MD17G1219600.v1.1
prunus_persica	Prupe.3G098700_v2.0.a1 Prupe.3G098900_v2.0.a1 Prupe.3G099000_v2.0.a1 Prupe.3G099900_v2.0.a1 Prupe.3G102600_v2.0.a1 Prupe.3G118700_v2.0.a1 Prupe.3G119200_v2.0.a1 Prupe.3G119300_v2.0.a1 Prupe.3G120500_v2.0.a1 Prupe.3G120700_v2.0.a1 Prupe.3G121000_v2.0.a1
pyrus_communis	pycom09g14640 pycom09g14650
rosa_chinensis	RchiOBHm_Chr1g0357741 RchiOBHm_Chr2g0133111
rosa_laevigata	RLG00000001176 RLG00000019308 RLG00000028001
rosa_multiflora	Rmu_sc0004657.1_g000015 Rmu_sc0011910.1_g000015 Rmu_sc0015485.1_g000003 Rmu_sc0039625.1_g000001 Rmu_ssc0000399.1_g000022
rosa_roxburghii	Rroxscaffold_2G00111420 Rroxscaffold_2G00111450 Rroxscaffold_4G00298560 Rroxscaffold_7G00177180
rosa_rugosa	Rorug01G0258200 Rorug02G0309700 Rorug06G0211500.1 Rorug07G0288700
rosa_samantha	Rh1AG272100 Rh1BG239300 Rh1CG256000 Rh1DG267600 Rh2AG362100 Rh2CG344500 Rh2CG345400 Rh2DG384900 Rh6AG321800 Rh6BG329100 Rh6BG329200 Rh6CG335000 Rh6DG322100
rosa_wichuraiana	Rw1G024280 Rw2G029440 Rw7G036850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1049
AccI	GTMKAC	1 cut(s)	437
AciI	CCGC	4 cut(s)	197, 671, 879, 1040
AcoI	YGGCCR	2 cut(s)	825, 914
AcsI	RAATTY	4 cut(s)	26, 35, 356, 1035
AcuI	CTGAAG	4 cut(s)	438, 444, 831, 954
AfaI	GTAC	4 cut(s)	525, 544, 705, 793
AfiI	CCNNNNNNNGG	4 cut(s)	154, 155, 241, 1049
AflII	CTTAAG	1 cut(s)	839
AgsI	TTSAA	5 cut(s)	32, 41, 455, 502, 761
AhlI	ACTAGT	1 cut(s)	539
AjnI	CCWGG	3 cut(s)	745, 827, 1048
AluBI	AGCT	5 cut(s)	114, 422, 889, 935, 1017
AluI	AGCT	5 cut(s)	114, 422, 889, 935, 1017
Alw21I	GWGCWC	1 cut(s)	81
Alw26I	GTCTC	3 cut(s)	220, 693, 820
AoxI	GGCC	2 cut(s)	825, 914
ApeKI	GCWGC	2 cut(s)	932, 1067
ApoI	RAATTY	4 cut(s)	26, 35, 356, 1035
Asp700I	GAANNNNTTC	1 cut(s)	513
AsuC2I	CCSGG	1 cut(s)	186
AsuHPI	GGTGA	5 cut(s)	170, 211, 308, 338, 392
BalI	TGGCCA	1 cut(s)	827
Bbv12I	GWGCWC	1 cut(s)	81
BbvI	GCAGC	2 cut(s)	944, 1054
BccI	CCATC	4 cut(s)	91, 187, 931, 977
BceAI	ACGGC	1 cut(s)	929
BciT130I	CCWGG	3 cut(s)	747, 829, 1050
BclI	TGATCA	1 cut(s)	328
BcnI	CCSGG	1 cut(s)	186
BcoDI	GTCTC	3 cut(s)	220, 693, 820
BcuI	ACTAGT	1 cut(s)	539
BfaI	CTAG	1 cut(s)	540
BfrI	CTTAAG	1 cut(s)	839
BisI	GCNGC	3 cut(s)	671, 933, 1068
BlsI	GCNGC	3 cut(s)	672, 934, 1069
BmcAI	AGTACT	1 cut(s)	544
Bme1390I	CCNGG	4 cut(s)	186, 747, 829, 1050
BmiI	GGNNCC	2 cut(s)	669, 988
BmrFI	CCNGG	4 cut(s)	186, 747, 829, 1050
BmsI	GCATC	1 cut(s)	702
BplI	GAGNNNNNCTC	4 cut(s)	607, 639, 659, 691
BpmI	CTGGAG	1 cut(s)	387
BpuEI	CTTGAG	1 cut(s)	728
BpuMI	CCSGG	1 cut(s)	186
BsaAI	YACGTR	2 cut(s)	630, 787
BsaI	GGTCTC	2 cut(s)	220, 693
BsaJI	CCNNGG	2 cut(s)	594, 828
Bsc4I	CCNNNNNNNGG	4 cut(s)	154, 155, 241, 1049
Bse118I	RCCGGY	1 cut(s)	719
Bse1I	ACTGG	3 cut(s)	86, 312, 550
BseBI	CCWGG	3 cut(s)	747, 829, 1050
BseDI	CCNNGG	2 cut(s)	594, 828
BseLI	CCNNNNNNNGG	4 cut(s)	154, 155, 241, 1049
BseMII	CTCAG	2 cut(s)	77, 747
BseNI	ACTGG	3 cut(s)	86, 312, 550
BseXI	GCAGC	2 cut(s)	944, 1054
BsgI	GTGCAG	1 cut(s)	1020
BshFI	GGCC	2 cut(s)	827, 916
BsiHKAI	GWGCWC	1 cut(s)	81
BsiSI	CCGG	4 cut(s)	185, 235, 506, 720
BslFI	GGGAC	1 cut(s)	622
BslI	CCNNNNNNNGG	4 cut(s)	154, 155, 241, 1049
BsmAI	GTCTC	3 cut(s)	220, 693, 820
BsmFI	GGGAC	1 cut(s)	622
BsnI	GGCC	2 cut(s)	827, 916
Bso31I	GGTCTC	2 cut(s)	220, 693
Bsp1286I	GDGCHC	1 cut(s)	81
Bsp143I	GATC	2 cut(s)	328, 382
BspACI	CCGC	4 cut(s)	197, 671, 879, 1040
BspANI	GGCC	2 cut(s)	827, 916
BspCNI	CTCAG	2 cut(s)	78, 746
BspLI	GGNNCC	2 cut(s)	669, 988
BspTI	CTTAAG	1 cut(s)	839
BspTNI	GGTCTC	2 cut(s)	220, 693
BsrFI	RCCGGY	1 cut(s)	719
BsrI	ACTGG	3 cut(s)	86, 312, 550
BssAI	RCCGGY	1 cut(s)	719
BssECI	CCNNGG	2 cut(s)	594, 828
BssMI	GATC	2 cut(s)	328, 382
BssNAI	GTATAC	1 cut(s)	438
BssT1I	CCWWGG	1 cut(s)	594
Bst1107I	GTATAC	1 cut(s)	438
Bst2UI	CCWGG	3 cut(s)	747, 829, 1050
Bst4CI	ACNGT	4 cut(s)	404, 494, 608, 659
Bst6I	CTCTTC	2 cut(s)	39, 312
BstAFI	CTTAAG	1 cut(s)	839
BstAPI	GCANNNNNTGC	1 cut(s)	1019
BstBAI	YACGTR	2 cut(s)	630, 787
BstC8I	GCNNGC	2 cut(s)	173, 1015
BstDEI	CTNAG	4 cut(s)	86, 561, 585, 733
BstKTI	GATC	2 cut(s)	331, 385
BstMAI	GTCTC	3 cut(s)	220, 693, 820
BstMBI	GATC	2 cut(s)	328, 382
BstMWI	GCNNNNNNNGC	2 cut(s)	670, 1019
BstNI	CCWGG	3 cut(s)	747, 829, 1050
BstNSI	RCATGY	1 cut(s)	175
BstSCI	CCNGG	4 cut(s)	184, 745, 827, 1048
BstSNI	TACGTA	1 cut(s)	630
BstV1I	GCAGC	2 cut(s)	944, 1054
BstZ17I	GTATAC	1 cut(s)	438
BsuRI	GGCC	2 cut(s)	827, 916
BtsIMutI	CAGTG	4 cut(s)	79, 319, 490, 664
Cac8I	GCNNGC	2 cut(s)	173, 1015
Cfr10I	RCCGGY	1 cut(s)	719
CsiI	ACCWGGT	1 cut(s)	1048
Csp6I	GTAC	4 cut(s)	524, 543, 704, 792
CviAII	CATG	6 cut(s)	71, 172, 239, 334, 407, 856
CviQI	GTAC	4 cut(s)	524, 543, 704, 792
DdeI	CTNAG	4 cut(s)	86, 561, 585, 733
DpnI	GATC	2 cut(s)	330, 384
DpnII	GATC	2 cut(s)	328, 382
DraI	TTTAAA	1 cut(s)	741
EaeI	YGGCCR	2 cut(s)	825, 914
Eam1104I	CTCTTC	2 cut(s)	39, 312
EarI	CTCTTC	2 cut(s)	39, 312
EciI	GGCGGA	1 cut(s)	1029
Eco105I	TACGTA	1 cut(s)	630
Eco130I	CCWWGG	1 cut(s)	594
Eco31I	GGTCTC	2 cut(s)	220, 693
Eco57I	CTGAAG	4 cut(s)	438, 444, 831, 954
EcoRI	GAATTC	1 cut(s)	1035
EcoRII	CCWGG	3 cut(s)	745, 827, 1048
EcoT14I	CCWWGG	1 cut(s)	594
ErhI	CCWWGG	1 cut(s)	594
FaeI	CATG	6 cut(s)	74, 175, 242, 337, 410, 859
FaqI	GGGAC	1 cut(s)	622
FatI	CATG	6 cut(s)	70, 171, 238, 333, 406, 855
FbaI	TGATCA	1 cut(s)	328
FblI	GTMKAC	1 cut(s)	437
Fnu4HI	GCNGC	3 cut(s)	671, 933, 1068
Fsp4HI	GCNGC	3 cut(s)	671, 933, 1068
FspBI	CTAG	1 cut(s)	540
GluI	GCNGC	3 cut(s)	671, 933, 1068
GsuI	CTGGAG	1 cut(s)	387
HaeIII	GGCC	2 cut(s)	827, 916
HapII	CCGG	4 cut(s)	185, 235, 506, 720
Hin1II	CATG	6 cut(s)	74, 175, 242, 337, 410, 859
HinfI	GANTC	3 cut(s)	67, 221, 227
HpaII	CCGG	4 cut(s)	185, 235, 506, 720
HphI	GGTGA	5 cut(s)	170, 211, 308, 338, 392
Hpy166II	GTNNAC	3 cut(s)	438, 490, 755
Hpy188I	TCNGA	7 cut(s)	16, 220, 226, 387, 571, 679, 736
Hpy188III	TCNNGA	1 cut(s)	366
Hpy8I	GTNNAC	3 cut(s)	438, 490, 755
HpyAV	CCTTC	6 cut(s)	101, 147, 426, 449, 739, 946
HpyCH4III	ACNGT	4 cut(s)	404, 494, 608, 659
HpyCH4IV	ACGT	2 cut(s)	629, 786
HpyCH4V	TGCA	3 cut(s)	536, 980, 1001
HpyF10VI	GCNNNNNNNGC	2 cut(s)	670, 1019
HpyF3I	CTNAG	4 cut(s)	86, 561, 585, 733
HpySE526I	ACGT	2 cut(s)	629, 786
Hsp92II	CATG	6 cut(s)	74, 175, 242, 337, 410, 859
Ksp22I	TGATCA	1 cut(s)	328
Kzo9I	GATC	2 cut(s)	328, 382
LmnI	GCTCC	2 cut(s)	667, 992
Lsp1109I	GCAGC	2 cut(s)	944, 1054
LweI	GCATC	1 cut(s)	702
MabI	ACCWGGT	1 cut(s)	1048
MaeI	CTAG	1 cut(s)	540
MaeII	ACGT	2 cut(s)	629, 786
MaeIII	GTNAC	1 cut(s)	1007
MalI	GATC	2 cut(s)	330, 384
MboI	GATC	2 cut(s)	328, 382
MboII	GAAGA	8 cut(s)	35, 44, 53, 56, 311, 329, 773, 960
MhlI	GDGCHC	1 cut(s)	81
MlsI	TGGCCA	1 cut(s)	827
MluCI	AATT	6 cut(s)	26, 35, 356, 601, 902, 1035
MluNI	TGGCCA	1 cut(s)	827
MlyI	GAGTC	2 cut(s)	76, 236
MmeI	TCCRAC	3 cut(s)	82, 237, 423
Mox20I	TGGCCA	1 cut(s)	827
MroXI	GAANNNNTTC	1 cut(s)	513
MscI	TGGCCA	1 cut(s)	827
MseI	TTAA	5 cut(s)	264, 462, 650, 740, 840
Msp20I	TGGCCA	1 cut(s)	827
MspA1I	CMGCKG	1 cut(s)	881
MspCI	CTTAAG	1 cut(s)	839
MspI	CCGG	4 cut(s)	185, 235, 506, 720
MspR9I	CCNGG	4 cut(s)	186, 747, 829, 1050
MvaI	CCWGG	3 cut(s)	747, 829, 1050
MwoI	GCNNNNNNNGC	2 cut(s)	670, 1019
NciI	CCSGG	1 cut(s)	186
NdeII	GATC	2 cut(s)	328, 382
NlaIII	CATG	6 cut(s)	74, 175, 242, 337, 410, 859
NlaIV	GGNNCC	2 cut(s)	669, 988
NmuCI	GTSAC	1 cut(s)	1007
NspI	RCATGY	1 cut(s)	175
PaeI	GCATGC	1 cut(s)	175
PdmI	GAANNNNTTC	1 cut(s)	513
PfeI	GAWTC	1 cut(s)	221
PflMI	CCANNNNNTGG	1 cut(s)	1049
PfoI	TCCNGGA	1 cut(s)	184
PkrI	GCNGC	3 cut(s)	672, 934, 1069
PleI	GAGTC	2 cut(s)	75, 235
PpsI	GAGTC	2 cut(s)	75, 235
Ppu21I	YACGTR	2 cut(s)	630, 787
Psp6I	CCWGG	3 cut(s)	745, 827, 1048
PspGI	CCWGG	3 cut(s)	745, 827, 1048
PspN4I	GGNNCC	2 cut(s)	669, 988
RsaI	GTAC	4 cut(s)	525, 544, 705, 793
RsaNI	GTAC	4 cut(s)	524, 543, 704, 792
SaqAI	TTAA	5 cut(s)	264, 462, 650, 740, 840
SatI	GCNGC	3 cut(s)	671, 933, 1068
Sau3AI	GATC	2 cut(s)	328, 382
ScaI	AGTACT	1 cut(s)	544
SchI	GAGTC	2 cut(s)	76, 236
ScrFI	CCNGG	4 cut(s)	186, 747, 829, 1050
SduI	GDGCHC	1 cut(s)	81
SexAI	ACCWGGT	1 cut(s)	1048
SfaNI	GCATC	1 cut(s)	702
SmlI	CTYRAG	2 cut(s)	707, 839
SmoI	CTYRAG	2 cut(s)	707, 839
SnaBI	TACGTA	1 cut(s)	630
SpeI	ACTAGT	1 cut(s)	539
SphI	GCATGC	1 cut(s)	175
Sse9I	AATT	6 cut(s)	26, 35, 356, 601, 902, 1035
SsiI	CCGC	4 cut(s)	197, 671, 879, 1040
SspMI	CTAG	1 cut(s)	540
StyD4I	CCNGG	4 cut(s)	184, 745, 827, 1048
StyI	CCWWGG	1 cut(s)	594
TaaI	ACNGT	4 cut(s)	404, 494, 608, 659
TaiI	ACGT	2 cut(s)	632, 789
TaqI	TCGA	2 cut(s)	446, 926
TasI	AATT	6 cut(s)	26, 35, 356, 601, 902, 1035
TatI	WGTACW	2 cut(s)	542, 791
TauI	GCSGC	1 cut(s)	673
TfiI	GAWTC	1 cut(s)	221
Tru1I	TTAA	5 cut(s)	264, 462, 650, 740, 840
Tru9I	TTAA	5 cut(s)	264, 462, 650, 740, 840
TscAI	CASTG	4 cut(s)	86, 319, 497, 664
TseFI	GTSAC	1 cut(s)	1007
TseI	GCWGC	2 cut(s)	932, 1067
Tsp45I	GTSAC	1 cut(s)	1007
TspDTI	ATGAA	3 cut(s)	17, 770, 887
TspRI	CASTG	4 cut(s)	86, 319, 497, 664
Van91I	CCANNNNNTGG	1 cut(s)	1049
Vha464I	CTTAAG	1 cut(s)	839
XapI	RAATTY	4 cut(s)	26, 35, 356, 1035
XceI	RCATGY	1 cut(s)	175
XmiI	GTMKAC	1 cut(s)	437
XmnI	GAANNNNTTC	1 cut(s)	513
XspI	CTAG	1 cut(s)	540
ZrmI	AGTACT	1 cut(s)	544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.