Prupe.7G119500_v2.0.a1

NLI interacting factor-like phosphatase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
14342939 .. 14345588
2650 bp
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UTR
Exon/CDS
Intron
Prupe.7G119500.2

Sequence Viewer

Length: 471 bp
ATGTCAGAAAAGTTGAAGGGCAAAGTTGAATGTTCTGGTAACAGTAGTAGTGAAGCCAAAGAATGTGGCCTCCCTTTGGAGAAACTGAACCTTGGTCCAAGAAAGAAGCTTCTTGTTCTTAGCCTTGGCGGGTTGCTTTGTCATAGGGTACACCGCTACGGAAGAGCCAATATACCACGCTTTCGCTATGTTGATGCATCATATGGAAGCTTTTTGTTTTTCTTCCAACTTGTTAGCAAATTAGAATTTTGTTCCTCACTGAAAATCTGTTCTTTTTTTTTTCTTTTTCTTTTTTGGCTCTTCTCTTGCACAGTTTACAAAAGGCCACACTCTGAAGATTTTATGAAATTCTGTTTAGAAAGATTTGATGTTGGAATATGTTCTTCTGCAAAGGAATGGTATTTGGACAATGCCTTGGATTGTGTGATGAAAGGACTGAGGAGTAAACTGGTATTTGCTTGGTTTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

157

Amino Acids

18.06

Weight (kDa)

9.19

Isoelectric Point (pI)

34.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 129, 154
AcsI RAATTY 2 cut(s) 245, 347
AcuI CTGAAG 1 cut(s) 354
AfaI GTAC 1 cut(s) 150
AfiI CCNNNNNNNGG 1 cut(s) 76
AgsI TTSAA 2 cut(s) 16, 29
AluBI AGCT 2 cut(s) 109, 210
AluI AGCT 2 cut(s) 109, 210
AoxI GGCC 2 cut(s) 67, 323
ApoI RAATTY 2 cut(s) 245, 347
Asp700I GAANNNNTTC 1 cut(s) 379
AspS9I GGNCC 1 cut(s) 95
AvaII GGWCC 1 cut(s) 95
Bme18I GGWCC 1 cut(s) 95
BmgT120I GGNCC 1 cut(s) 95
BmsI GCATC 2 cut(s) 184, 206
BsaJI CCNNGG 3 cut(s) 91, 124, 414
Bsc4I CCNNNNNNNGG 1 cut(s) 76
Bse1I ACTGG 1 cut(s) 453
BseDI CCNNGG 3 cut(s) 91, 124, 414
BseLI CCNNNNNNNGG 1 cut(s) 76
BseMII CTCAG 1 cut(s) 428
BseNI ACTGG 1 cut(s) 453
BseRI GAGGAG 1 cut(s) 454
BshFI GGCC 2 cut(s) 69, 325
BslI CCNNNNNNNGG 1 cut(s) 76
BsnI GGCC 2 cut(s) 69, 325
BspACI CCGC 2 cut(s) 129, 154
BspANI GGCC 2 cut(s) 69, 325
BspCNI CTCAG 1 cut(s) 429
BspQI GCTCTTC 2 cut(s) 157, 305
BsrI ACTGG 1 cut(s) 453
BssECI CCNNGG 3 cut(s) 91, 124, 414
BssT1I CCWWGG 3 cut(s) 91, 124, 414
Bst4CI ACNGT 2 cut(s) 44, 313
Bst6I CTCTTC 2 cut(s) 157, 305
BstDEI CTNAG 2 cut(s) 119, 437
BsuRI GGCC 2 cut(s) 69, 325
BtsIMutI CAGTG 1 cut(s) 257
Cfr13I GGNCC 1 cut(s) 95
Csp6I GTAC 1 cut(s) 149
CspCI CAANNNNNGTGG 2 cut(s) 46, 81
CviJI RGCY 8 cut(s) 56, 69, 109, 123, 167, 210, 298, 325
CviKI_1 RGCY 8 cut(s) 56, 69, 109, 123, 167, 210, 298, 325
CviQI GTAC 1 cut(s) 149
DdeI CTNAG 2 cut(s) 119, 437
Eam1104I CTCTTC 2 cut(s) 157, 305
EarI CTCTTC 2 cut(s) 157, 305
Eco130I CCWWGG 3 cut(s) 91, 124, 414
Eco47I GGWCC 1 cut(s) 95
Eco57I CTGAAG 1 cut(s) 354
EcoT14I CCWWGG 3 cut(s) 91, 124, 414
EcoT22I ATGCAT 1 cut(s) 199
ErhI CCWWGG 3 cut(s) 91, 124, 414
FaiI YATR 7 cut(s) 144, 173, 189, 202, 204, 344, 379
FauI CCCGC 1 cut(s) 122
FauNDI CATATG 1 cut(s) 202
HaeIII GGCC 2 cut(s) 69, 325
HindIII AAGCTT 2 cut(s) 107, 208
Hpy166II GTNNAC 3 cut(s) 151, 316, 446
Hpy188I TCNGA 2 cut(s) 7, 334
Hpy8I GTNNAC 3 cut(s) 151, 316, 446
HpyAV CCTTC 1 cut(s) 10
HpyCH4III ACNGT 2 cut(s) 44, 313
HpyCH4V TGCA 3 cut(s) 197, 309, 389
HpyF3I CTNAG 2 cut(s) 119, 437
LguI GCTCTTC 2 cut(s) 157, 305
LpnPI CCDG 2 cut(s) 21, 434
LweI GCATC 2 cut(s) 184, 206
MaeIII GTNAC 1 cut(s) 38
MboII GAAGA 5 cut(s) 174, 214, 292, 347, 375
MluCI AATT 3 cut(s) 239, 245, 347
MmeI TCCRAC 2 cut(s) 250, 352
MnlI CCTC 3 cut(s) 80, 265, 432
Mph1103I ATGCAT 1 cut(s) 199
MroXI GAANNNNTTC 1 cut(s) 379
NdeI CATATG 1 cut(s) 202
NsiI ATGCAT 1 cut(s) 199
PciSI GCTCTTC 2 cut(s) 157, 305
PdmI GAANNNNTTC 1 cut(s) 379
PspPI GGNCC 1 cut(s) 95
RsaI GTAC 1 cut(s) 150
RsaNI GTAC 1 cut(s) 149
SapI GCTCTTC 2 cut(s) 157, 305
Sau96I GGNCC 1 cut(s) 95
SetI ASST 3 cut(s) 93, 111, 212
SfaNI GCATC 2 cut(s) 184, 206
SinI GGWCC 1 cut(s) 95
Sse9I AATT 3 cut(s) 239, 245, 347
SsiI CCGC 2 cut(s) 129, 154
StyI CCWWGG 3 cut(s) 91, 124, 414
TaaI ACNGT 2 cut(s) 44, 313
TasI AATT 3 cut(s) 239, 245, 347
TscAI CASTG 1 cut(s) 264
TspDTI ATGAA 2 cut(s) 359, 443
TspGWI ACGGA 1 cut(s) 174
TspRI CASTG 1 cut(s) 264
VpaK11BI GGWCC 1 cut(s) 95
XapI RAATTY 2 cut(s) 245, 347
XmnI GAANNNNTTC 1 cut(s) 379
Zsp2I ATGCAT 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.