Rh3DG173400

NLI interacting factor-like phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
15221206 .. 15222087
882 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG173400.1

Sequence Viewer

Length: 474 bp
ATGATCTTCTGCAAGGGAATGGTACTTGGACAATGCCTTGGATTGTGGGATGAAAGGATTGAGGAGGAAGTTGTTGTTTGCTTGGGGTTCAAAACCTTGGAGAACCAAAAGAAGCCCATCTTTCTGAAAGGGTTGAAGAAAATATGGGAAAACAAGGGTTTCAAAGCCTCACTTCCATCTTCCATGGGGAAATACTCTTCATTGAACACCTTGTTAATTGATGATAAGGCTTACAAGGCTCTACTAAATCCTGCTCACACAGCCATCTTTCCTCCTGAATTGAAGGTTGACCAAGTTGATGACAAGGCTTTAGGTCCTAATGGTGAGTTGAGGCTTTACTTGGAGGGACTTGCAGATGCCGATGATGTTACTTCTTATGTTAAAGATCATCCATTTGGACAGCCAGCAATAACAACTACTCACTCAGATTGGGATTTCTATTCAAAGATCCTTACTCATTTCCAGAAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

157

Amino Acids

17.69

Weight (kDa)

5.8

Isoelectric Point (pI)

21.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 442
AfaI GTAC 1 cut(s) 24
AgsI TTSAA 6 cut(s) 91, 136, 163, 205, 283, 444
AlwI GGATC 1 cut(s) 442
AspS9I GGNCC 1 cut(s) 314
AsuHPI GGTGA 1 cut(s) 335
AvaII GGWCC 1 cut(s) 314
BccI CCATC 3 cut(s) 125, 184, 272
Bme18I GGWCC 1 cut(s) 314
BmgT120I GGNCC 1 cut(s) 314
BmsI GCATC 1 cut(s) 346
BsaJI CCNNGG 3 cut(s) 37, 96, 183
BseDI CCNNGG 3 cut(s) 37, 96, 183
BseGI GGATG 2 cut(s) 55, 388
BseMII CTCAG 1 cut(s) 438
BseRI GAGGAG 1 cut(s) 77
BslFI GGGAC 1 cut(s) 360
BsmFI GGGAC 1 cut(s) 360
Bsp143I GATC 3 cut(s) 3, 385, 447
Bsp19I CCATGG 1 cut(s) 183
BspCNI CTCAG 1 cut(s) 437
BspPI GGATC 1 cut(s) 442
BssECI CCNNGG 3 cut(s) 37, 96, 183
BssMI GATC 3 cut(s) 3, 385, 447
BssT1I CCWWGG 3 cut(s) 37, 96, 183
Bst6I CTCTTC 1 cut(s) 202
BstC8I GCNNGC 1 cut(s) 405
BstDEI CTNAG 1 cut(s) 424
BstDSI CCRYGG 1 cut(s) 183
BstF5I GGATG 2 cut(s) 55, 388
BstKTI GATC 3 cut(s) 6, 388, 450
BstMBI GATC 3 cut(s) 3, 385, 447
BstMWI GCNNNNNNNGC 2 cut(s) 236, 260
BstX2I RGATCY 1 cut(s) 447
BstYI RGATCY 1 cut(s) 447
BtgI CCRYGG 1 cut(s) 183
BtsCI GGATG 2 cut(s) 55, 388
Cac8I GCNNGC 1 cut(s) 405
Cfr13I GGNCC 1 cut(s) 314
Csp6I GTAC 1 cut(s) 23
CviAII CATG 1 cut(s) 184
CviJI RGCY 8 cut(s) 115, 167, 230, 239, 263, 308, 334, 403
CviKI_1 RGCY 8 cut(s) 115, 167, 230, 239, 263, 308, 334, 403
CviQI GTAC 1 cut(s) 23
DdeI CTNAG 1 cut(s) 424
DpnI GATC 3 cut(s) 5, 387, 449
DpnII GATC 3 cut(s) 3, 385, 447
Eam1104I CTCTTC 1 cut(s) 202
EarI CTCTTC 1 cut(s) 202
Eco130I CCWWGG 3 cut(s) 37, 96, 183
Eco47I GGWCC 1 cut(s) 314
EcoO109I RGGNCCY 1 cut(s) 314
EcoT14I CCWWGG 3 cut(s) 37, 96, 183
ErhI CCWWGG 3 cut(s) 37, 96, 183
FaeI CATG 1 cut(s) 187
FaiI YATR 3 cut(s) 145, 185, 378
FalI AAGNNNNNCTT 4 cut(s) 104, 136, 156, 188
FaqI GGGAC 1 cut(s) 360
FatI CATG 1 cut(s) 183
FokI GGATG 2 cut(s) 62, 375
Hin1II CATG 1 cut(s) 187
HincII GTYRAC 1 cut(s) 289
HindII GTYRAC 1 cut(s) 289
HphI GGTGA 1 cut(s) 335
Hpy166II GTNNAC 1 cut(s) 289
Hpy188I TCNGA 2 cut(s) 126, 427
Hpy188III TCNNGA 2 cut(s) 275, 463
Hpy8I GTNNAC 1 cut(s) 289
HpyAV CCTTC 1 cut(s) 277
HpyCH4V TGCA 2 cut(s) 12, 353
HpyF10VI GCNNNNNNNGC 2 cut(s) 236, 260
HpyF3I CTNAG 1 cut(s) 424
Hsp92II CATG 1 cut(s) 187
Kzo9I GATC 3 cut(s) 3, 385, 447
LpnPI CCDG 3 cut(s) 264, 288, 417
LweI GCATC 1 cut(s) 346
MaeIII GTNAC 1 cut(s) 367
MalI GATC 3 cut(s) 5, 387, 449
MboI GATC 3 cut(s) 3, 385, 447
MboII GAAGA 3 cut(s) 148, 171, 189
MflI RGATCY 1 cut(s) 447
MluCI AATT 2 cut(s) 216, 278
MnlI CCTC 6 cut(s) 55, 58, 178, 282, 324, 337
MseI TTAA 3 cut(s) 215, 381, 472
MwoI GCNNNNNNNGC 2 cut(s) 236, 260
NcoI CCATGG 1 cut(s) 183
NdeII GATC 3 cut(s) 3, 385, 447
NlaIII CATG 1 cut(s) 187
PpuMI RGGWCCY 1 cut(s) 314
Psp5II RGGWCCY 1 cut(s) 314
PspPI GGNCC 1 cut(s) 314
PspPPI RGGWCCY 1 cut(s) 314
PsuI RGATCY 1 cut(s) 447
RsaI GTAC 1 cut(s) 24
RsaNI GTAC 1 cut(s) 23
SaqAI TTAA 3 cut(s) 215, 381, 472
Sau3AI GATC 3 cut(s) 3, 385, 447
Sau96I GGNCC 1 cut(s) 314
SetI ASST 4 cut(s) 98, 212, 288, 316
SfaNI GCATC 1 cut(s) 346
SinI GGWCC 1 cut(s) 314
Sse9I AATT 2 cut(s) 216, 278
StyI CCWWGG 3 cut(s) 37, 96, 183
TasI AATT 2 cut(s) 216, 278
Tru1I TTAA 3 cut(s) 215, 381, 472
Tru9I TTAA 3 cut(s) 215, 381, 472
TspDTI ATGAA 2 cut(s) 66, 189
VpaK11BI GGWCC 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.