Rh4CG422000

NLI interacting factor-like phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
66567259 .. 66568173
915 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG422000.1

Sequence Viewer

Length: 462 bp
ATGATGGCAAATCAGAAAAATAGACTATTATTTGTGTGGGGTCAATCTCAATGTACAGATTCTGGGTCCAAGTCCTTGGAGAAAAGAATGAAGCCTCTATTTTTCAAAGAACTGAAGAAAGTGTGGTATCATTTCAGCGGAAAGTATTCTGAATGTGATACTTTGTTGATTGATGATCAACCATACAAGGCCCTACTCAATCCTGCACACACAGGCATTTTTCTGGAATCCTACAATCCTGACAATGCTAGTGATAATTTATTGGATCCAAATGGACAGCTAGGGGTGTATTTGGATGGCCTTGCGGCTGCGACTAATGCTCAGGTTTATGTAAAGGAGAACCCTATTGGAGTGCCTGCAATTTCATCAGATCATCCTGATTGGAATTTCTACTCTGAAGTCCTTCGAGGGATTAAGGGAGAAAGTGAGGAAAAGATTACGCCTCAGCAACAAGAGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

153

Amino Acids

17.26

Weight (kDa)

5.15

Isoelectric Point (pI)

32.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 138, 305
AclWI GGATC 2 cut(s) 260, 273
AcsI RAATTY 1 cut(s) 385
AcuI CTGAAG 2 cut(s) 134, 417
AfaI GTAC 1 cut(s) 55
AgsI TTSAA 1 cut(s) 106
AluBI AGCT 1 cut(s) 280
AluI AGCT 1 cut(s) 280
AlwI GGATC 2 cut(s) 260, 273
AlwNI CAGNNNCTG 1 cut(s) 62
AoxI GGCC 2 cut(s) 189, 298
ApeKI GCWGC 1 cut(s) 308
ApoI RAATTY 1 cut(s) 385
Asp700I GAANNNNTTC 2 cut(s) 145, 402
AspS9I GGNCC 2 cut(s) 66, 190
AvaII GGWCC 1 cut(s) 66
BamHI GGATCC 1 cut(s) 265
BbvCI CCTCAGC 1 cut(s) 444
BbvI GCAGC 1 cut(s) 295
BccI CCATC 1 cut(s) 290
BclI TGATCA 1 cut(s) 175
BfaI CTAG 2 cut(s) 249, 281
BisI GCNGC 2 cut(s) 306, 309
BlsI GCNGC 2 cut(s) 307, 310
Bme18I GGWCC 1 cut(s) 66
BmgT120I GGNCC 2 cut(s) 66, 190
BmiI GGNNCC 2 cut(s) 67, 267
Bpu10I CCTNAGC 2 cut(s) 321, 444
BsaJI CCNNGG 1 cut(s) 75
BseDI CCNNGG 1 cut(s) 75
BseGI GGATG 2 cut(s) 301, 373
BseMII CTCAG 2 cut(s) 335, 458
BseXI GCAGC 1 cut(s) 295
BsgI GTGCAG 1 cut(s) 189
BshFI GGCC 2 cut(s) 191, 300
BsnI GGCC 2 cut(s) 191, 300
Bsp1407I TGTACA 1 cut(s) 53
Bsp143I GATC 3 cut(s) 175, 265, 370
BspACI CCGC 2 cut(s) 138, 305
BspANI GGCC 2 cut(s) 191, 300
BspCNI CTCAG 2 cut(s) 334, 457
BspLI GGNNCC 2 cut(s) 67, 267
BspPI GGATC 2 cut(s) 260, 273
BsrGI TGTACA 1 cut(s) 53
BssECI CCNNGG 1 cut(s) 75
BssMI GATC 3 cut(s) 175, 265, 370
BssT1I CCWWGG 1 cut(s) 75
BstAUI TGTACA 1 cut(s) 53
BstC8I GCNNGC 1 cut(s) 357
BstDEI CTNAG 2 cut(s) 321, 444
BstF5I GGATG 2 cut(s) 301, 373
BstKTI GATC 3 cut(s) 178, 268, 373
BstMBI GATC 3 cut(s) 175, 265, 370
BstMWI GCNNNNNNNGC 1 cut(s) 317
BstV1I GCAGC 1 cut(s) 295
BstX2I RGATCY 1 cut(s) 265
BstXI CCANNNNNNTGG 1 cut(s) 76
BstYI RGATCY 1 cut(s) 265
BsuRI GGCC 2 cut(s) 191, 300
BtsCI GGATG 2 cut(s) 301, 373
Cac8I GCNNGC 1 cut(s) 357
CaiI CAGNNNCTG 1 cut(s) 62
Cfr13I GGNCC 2 cut(s) 66, 190
Csp6I GTAC 1 cut(s) 54
CviJI RGCY 5 cut(s) 94, 191, 280, 300, 308
CviKI_1 RGCY 5 cut(s) 94, 191, 280, 300, 308
CviQI GTAC 1 cut(s) 54
DdeI CTNAG 2 cut(s) 321, 444
DpnI GATC 3 cut(s) 177, 267, 372
DpnII GATC 3 cut(s) 175, 265, 370
Eco130I CCWWGG 1 cut(s) 75
Eco47I GGWCC 1 cut(s) 66
Eco57I CTGAAG 2 cut(s) 134, 417
EcoO109I RGGNCCY 1 cut(s) 190
EcoT14I CCWWGG 1 cut(s) 75
ErhI CCWWGG 1 cut(s) 75
FaiI YATR 2 cut(s) 184, 330
FbaI TGATCA 1 cut(s) 175
Fnu4HI GCNGC 2 cut(s) 306, 309
FokI GGATG 2 cut(s) 308, 360
Fsp4HI GCNGC 2 cut(s) 306, 309
FspBI CTAG 2 cut(s) 249, 281
GluI GCNGC 2 cut(s) 306, 309
HaeIII GGCC 2 cut(s) 191, 300
HinfI GANTC 3 cut(s) 59, 227, 455
Hpy188I TCNGA 4 cut(s) 15, 151, 370, 397
Hpy188III TCNNGA 4 cut(s) 224, 239, 377, 459
HpyAV CCTTC 1 cut(s) 413
HpyCH4V TGCA 2 cut(s) 206, 359
HpyF10VI GCNNNNNNNGC 1 cut(s) 317
HpyF3I CTNAG 2 cut(s) 321, 444
Ksp22I TGATCA 1 cut(s) 175
Kzo9I GATC 3 cut(s) 175, 265, 370
LpnPI CCDG 8 cut(s) 48, 198, 209, 216, 252, 308, 369, 390
Lsp1109I GCAGC 1 cut(s) 295
MaeI CTAG 2 cut(s) 249, 281
MalI GATC 3 cut(s) 177, 267, 372
MboI GATC 3 cut(s) 175, 265, 370
MboII GAAGA 1 cut(s) 127
MflI RGATCY 1 cut(s) 265
MluCI AATT 3 cut(s) 256, 360, 385
MnlI CCTC 4 cut(s) 105, 401, 421, 453
MroXI GAANNNNTTC 2 cut(s) 145, 402
MseI TTAA 1 cut(s) 414
MspA1I CMGCKG 1 cut(s) 138
MwoI GCNNNNNNNGC 1 cut(s) 317
NdeII GATC 3 cut(s) 175, 265, 370
NlaIV GGNNCC 2 cut(s) 67, 267
PdmI GAANNNNTTC 2 cut(s) 145, 402
PfeI GAWTC 2 cut(s) 59, 227
PkrI GCNGC 2 cut(s) 307, 310
PspN4I GGNNCC 2 cut(s) 67, 267
PspPI GGNCC 2 cut(s) 66, 190
PstNI CAGNNNCTG 1 cut(s) 62
PsuI RGATCY 1 cut(s) 265
RsaI GTAC 1 cut(s) 55
RsaNI GTAC 1 cut(s) 54
SaqAI TTAA 1 cut(s) 414
SatI GCNGC 2 cut(s) 306, 309
Sau3AI GATC 3 cut(s) 175, 265, 370
Sau96I GGNCC 2 cut(s) 66, 190
SetI ASST 2 cut(s) 282, 327
SinI GGWCC 1 cut(s) 66
Sse9I AATT 3 cut(s) 256, 360, 385
SsiI CCGC 2 cut(s) 138, 305
SspMI CTAG 2 cut(s) 249, 281
StyI CCWWGG 1 cut(s) 75
TaqI TCGA 1 cut(s) 406
TasI AATT 3 cut(s) 256, 360, 385
TatI WGTACW 1 cut(s) 53
TauI GCSGC 1 cut(s) 308
TfiI GAWTC 2 cut(s) 59, 227
Tru1I TTAA 1 cut(s) 414
Tru9I TTAA 1 cut(s) 414
TseI GCWGC 1 cut(s) 308
TspDTI ATGAA 2 cut(s) 104, 354
VpaK11BI GGWCC 1 cut(s) 66
XapI RAATTY 1 cut(s) 385
XmnI GAANNNNTTC 2 cut(s) 145, 402
XspI CTAG 2 cut(s) 249, 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.