NLI interacting factor-like phosphatase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NIF | PF03031 | 574 - 755 | 2.3e-19 | NLI interacting factor-like phosphatase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1453 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1382 |
| AccI | GTMKAC | 5 cut(s) | 508, 724, 940, 1159, 1755 |
| AccII | CGCG | 1 cut(s) | 127 |
| AciI | CCGC | 4 cut(s) | 125, 715, 934, 1150 |
| AclWI | GGATC | 9 cut(s) | 356, 371, 1803, 1989, 2076, 2162, 2175, 2201, 2370 |
| AcoI | YGGCCR | 1 cut(s) | 2290 |
| AcsI | RAATTY | 4 cut(s) | 61, 79, 425, 2326 |
| AcuI | CTGAAG | 3 cut(s) | 87, 333, 2075 |
| AcyI | GRCGYC | 1 cut(s) | 1454 |
| AdeI | CACNNNGTG | 1 cut(s) | 218 |
| AfaI | GTAC | 6 cut(s) | 108, 478, 880, 1801, 1996, 2191 |
| AfeI | AGCGCT | 1 cut(s) | 1516 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1382, 2153, 2186 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 118 |
| AhlI | ACTAGT | 2 cut(s) | 881, 1750 |
| AjnI | CCWGG | 3 cut(s) | 500, 2016, 2163 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1030, 1062 |
| AluBI | AGCT | 9 cut(s) | 272, 311, 317, 1442, 1505, 1614, 1723, 1844, 1954 |
| AluI | AGCT | 9 cut(s) | 272, 311, 317, 1442, 1505, 1614, 1723, 1844, 1954 |
| Alw21I | GWGCWC | 1 cut(s) | 1444 |
| Alw26I | GTCTC | 6 cut(s) | 126, 249, 617, 836, 1289, 1304 |
| AlwI | GGATC | 9 cut(s) | 356, 371, 1803, 1989, 2076, 2162, 2175, 2201, 2370 |
| Aor51HI | AGCGCT | 1 cut(s) | 1516 |
| AoxI | GGCC | 6 cut(s) | 568, 787, 1003, 2130, 2239, 2290 |
| ApeKI | GCWGC | 2 cut(s) | 1152, 1517 |
| ApoI | RAATTY | 4 cut(s) | 61, 79, 425, 2326 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2270, 2302 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1411, 2086 |
| AspLEI | GCGC | 3 cut(s) | 1456, 1517, 1909 |
| AspS9I | GGNCC | 5 cut(s) | 112, 568, 787, 1003, 2131 |
| AvaII | GGWCC | 1 cut(s) | 112 |
| BalI | TGGCCA | 1 cut(s) | 2292 |
| BamHI | GGATCC | 1 cut(s) | 2167 |
| BanI | GGYRCC | 1 cut(s) | 1453 |
| BanII | GRGCYC | 1 cut(s) | 1444 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 427, 459 |
| BauI | CACGAG | 2 cut(s) | 48, 1680 |
| BbsI | GAAGAC | 5 cut(s) | 885, 1101, 1227, 1360, 1665 |
| Bbv12I | GWGCWC | 1 cut(s) | 1444 |
| BbvCI | CCTCAGC | 3 cut(s) | 268, 1521, 1851 |
| BbvI | GCAGC | 2 cut(s) | 1164, 1504 |
| BceAI | ACGGC | 3 cut(s) | 555, 774, 990 |
| BciT130I | CCWGG | 3 cut(s) | 502, 2018, 2165 |
| BclI | TGATCA | 1 cut(s) | 2116 |
| BcoDI | GTCTC | 6 cut(s) | 126, 249, 617, 836, 1289, 1304 |
| BcuI | ACTAGT | 2 cut(s) | 881, 1750 |
| BfaI | CTAG | 5 cut(s) | 144, 882, 1703, 1751, 1829 |
| BfmI | CTRYAG | 1 cut(s) | 1756 |
| BfoI | RGCGCY | 2 cut(s) | 1457, 1518 |
| BglII | AGATCT | 1 cut(s) | 947 |
| BisI | GCNGC | 2 cut(s) | 1153, 1518 |
| BlsI | GCNGC | 2 cut(s) | 1154, 1519 |
| BmcAI | AGTACT | 1 cut(s) | 880 |
| Bme1390I | CCNGG | 3 cut(s) | 502, 2018, 2165 |
| Bme18I | GGWCC | 1 cut(s) | 112 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 118 |
| BmgT120I | GGNCC | 5 cut(s) | 112, 568, 787, 1003, 2131 |
| BmiI | GGNNCC | 2 cut(s) | 1455, 2169 |
| BmrFI | CCNGG | 3 cut(s) | 502, 2018, 2165 |
| BmsI | GCATC | 2 cut(s) | 1996, 2102 |
| BpiI | GAAGAC | 5 cut(s) | 885, 1101, 1227, 1360, 1665 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 142, 174 |
| BpmI | CTGGAG | 2 cut(s) | 272, 339 |
| Bpu10I | CCTNAGC | 4 cut(s) | 268, 1473, 1521, 1851 |
| BpuEI | CTTGAG | 1 cut(s) | 1931 |
| BsaAI | YACGTR | 1 cut(s) | 2272 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1986 |
| BsaHI | GRCGYC | 1 cut(s) | 1454 |
| BsaI | GGTCTC | 1 cut(s) | 126 |
| BsaJI | CCNNGG | 5 cut(s) | 115, 500, 1024, 1790, 2016 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1382, 2153, 2186 |
| Bse1I | ACTGG | 3 cut(s) | 15, 667, 973 |
| Bse3DI | GCAATG | 1 cut(s) | 1453 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1986 |
| BseBI | CCWGG | 3 cut(s) | 502, 2018, 2165 |
| BseDI | CCNNGG | 5 cut(s) | 115, 500, 1024, 1790, 2016 |
| BseGI | GGATG | 3 cut(s) | 11, 1483, 2314 |
| BseJI | GATNNNNATC | 1 cut(s) | 1986 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1382, 2153, 2186 |
| BseMI | GCAATG | 1 cut(s) | 1453 |
| BseMII | CTCAG | 8 cut(s) | 282, 321, 384, 555, 1472, 1512, 1842, 1946 |
| BseNI | ACTGG | 3 cut(s) | 15, 667, 973 |
| BseRI | GAGGAG | 4 cut(s) | 336, 566, 1620, 1868 |
| BseXI | GCAGC | 2 cut(s) | 1164, 1504 |
| Bsh1236I | CGCG | 1 cut(s) | 127 |
| Bsh1285I | CGRYCG | 1 cut(s) | 370 |
| BshFI | GGCC | 6 cut(s) | 570, 789, 1005, 2132, 2241, 2292 |
| BshNI | GGYRCC | 1 cut(s) | 1453 |
| BsiEI | CGRYCG | 1 cut(s) | 370 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1444 |
| BslFI | GGGAC | 2 cut(s) | 178, 1999 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1382, 2153, 2186 |
| BsmAI | GTCTC | 6 cut(s) | 126, 249, 617, 836, 1289, 1304 |
| BsmFI | GGGAC | 2 cut(s) | 178, 1999 |
| BsmI | GAATGC | 1 cut(s) | 1276 |
| BsnI | GGCC | 6 cut(s) | 570, 789, 1005, 2132, 2241, 2292 |
| Bso31I | GGTCTC | 1 cut(s) | 126 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1444 |
| Bsp19I | CCATGG | 1 cut(s) | 115 |
| BspACI | CCGC | 4 cut(s) | 125, 715, 934, 1150 |
| BspANI | GGCC | 6 cut(s) | 570, 789, 1005, 2132, 2241, 2292 |
| BspCNI | CTCAG | 8 cut(s) | 281, 322, 385, 556, 1471, 1513, 1843, 1947 |
| BspFNI | CGCG | 1 cut(s) | 127 |
| BspLI | GGNNCC | 2 cut(s) | 1455, 2169 |
| BspPI | GGATC | 9 cut(s) | 356, 371, 1803, 1989, 2076, 2162, 2175, 2201, 2370 |
| BspQI | GCTCTTC | 1 cut(s) | 301 |
| BspT107I | GGYRCC | 1 cut(s) | 1453 |
| BspTNI | GGTCTC | 1 cut(s) | 126 |
| BsrDI | GCAATG | 1 cut(s) | 1453 |
| BsrI | ACTGG | 3 cut(s) | 15, 667, 973 |
| BssECI | CCNNGG | 5 cut(s) | 115, 500, 1024, 1790, 2016 |
| BssNI | GRCGYC | 1 cut(s) | 1454 |
| BssSI | CACGAG | 2 cut(s) | 48, 1680 |
| BssT1I | CCWWGG | 2 cut(s) | 115, 1790 |
| Bst2BI | CACGAG | 2 cut(s) | 48, 1680 |
| Bst2UI | CCWGG | 3 cut(s) | 502, 2018, 2165 |
| Bst4CI | ACNGT | 3 cut(s) | 628, 1226, 1331 |
| Bst6I | CTCTTC | 3 cut(s) | 143, 301, 2051 |
| BstACI | GRCGYC | 1 cut(s) | 1454 |
| BstBAI | YACGTR | 1 cut(s) | 2272 |
| BstC8I | GCNNGC | 7 cut(s) | 255, 274, 1043, 1444, 2239, 2294, 2298 |
| BstDEI | CTNAG | 9 cut(s) | 268, 330, 393, 564, 1458, 1473, 1521, 1851, 1955 |
| BstDSI | CCRYGG | 1 cut(s) | 115 |
| BstEII | GGTNACC | 1 cut(s) | 261 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2151 |
| BstF5I | GGATG | 3 cut(s) | 11, 1483, 2314 |
| BstFNI | CGCG | 1 cut(s) | 127 |
| BstH2I | RGCGCY | 2 cut(s) | 1457, 1518 |
| BstHHI | GCGC | 3 cut(s) | 1456, 1517, 1909 |
| BstMAI | GTCTC | 6 cut(s) | 126, 249, 617, 836, 1289, 1304 |
| BstMCI | CGRYCG | 1 cut(s) | 370 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 2243 |
| BstNI | CCWGG | 3 cut(s) | 502, 2018, 2165 |
| BstNSI | RCATGY | 4 cut(s) | 257, 533, 752, 1045 |
| BstPI | GGTNACC | 1 cut(s) | 261 |
| BstSCI | CCNGG | 3 cut(s) | 500, 2016, 2163 |
| BstSFI | CTRYAG | 1 cut(s) | 1756 |
| BstUI | CGCG | 1 cut(s) | 127 |
| BstV1I | GCAGC | 2 cut(s) | 1164, 1504 |
| BstV2I | GAAGAC | 5 cut(s) | 885, 1101, 1227, 1360, 1665 |
| BstX2I | RGATCY | 4 cut(s) | 947, 2167, 2206, 2362 |
| BstYI | RGATCY | 4 cut(s) | 947, 2167, 2206, 2362 |
| BsuRI | GGCC | 6 cut(s) | 570, 789, 1005, 2132, 2241, 2292 |
| BtgI | CCRYGG | 1 cut(s) | 115 |
| BtsCI | GGATG | 3 cut(s) | 11, 1483, 2314 |
| BtsIMutI | CAGTG | 1 cut(s) | 1059 |
| Cac8I | GCNNGC | 7 cut(s) | 255, 274, 1043, 1444, 2239, 2294, 2298 |
| CfoI | GCGC | 3 cut(s) | 1456, 1517, 1909 |
| Cfr13I | GGNCC | 5 cut(s) | 112, 568, 787, 1003, 2131 |
| Csp6I | GTAC | 6 cut(s) | 107, 477, 879, 1800, 1995, 2190 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1762, 1797 |
| CviQI | GTAC | 6 cut(s) | 107, 477, 879, 1800, 1995, 2190 |
| DdeI | CTNAG | 9 cut(s) | 268, 330, 393, 564, 1458, 1473, 1521, 1851, 1955 |
| DinI | GGCGCC | 1 cut(s) | 1455 |
| DraI | TTTAAA | 1 cut(s) | 1837 |
| DraIII | CACNNNGTG | 1 cut(s) | 218 |
| DriI | GACNNNNNGTC | 1 cut(s) | 118 |
| EaeI | YGGCCR | 1 cut(s) | 2290 |
| Eam1104I | CTCTTC | 3 cut(s) | 143, 301, 2051 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 118 |
| EarI | CTCTTC | 3 cut(s) | 143, 301, 2051 |
| Ecl136II | GAGCTC | 1 cut(s) | 1442 |
| Eco130I | CCWWGG | 2 cut(s) | 115, 1790 |
| Eco24I | GRGCYC | 1 cut(s) | 1444 |
| Eco31I | GGTCTC | 1 cut(s) | 126 |
| Eco32I | GATATC | 2 cut(s) | 1169, 1435 |
| Eco47I | GGWCC | 1 cut(s) | 112 |
| Eco47III | AGCGCT | 1 cut(s) | 1516 |
| Eco53kI | GAGCTC | 1 cut(s) | 1442 |
| Eco57I | CTGAAG | 3 cut(s) | 87, 333, 2075 |
| Eco91I | GGTNACC | 1 cut(s) | 261 |
| EcoICRI | GAGCTC | 1 cut(s) | 1442 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2151 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2131 |
| EcoO65I | GGTNACC | 1 cut(s) | 261 |
| EcoRII | CCWGG | 3 cut(s) | 500, 2016, 2163 |
| EcoRV | GATATC | 2 cut(s) | 1169, 1435 |
| EcoT14I | CCWWGG | 2 cut(s) | 115, 1790 |
| EcoT22I | ATGCAT | 4 cut(s) | 36, 612, 831, 1266 |
| EcoT38I | GRGCYC | 1 cut(s) | 1444 |
| EgeI | GGCGCC | 1 cut(s) | 1455 |
| EheI | GGCGCC | 1 cut(s) | 1455 |
| ErhI | CCWWGG | 2 cut(s) | 115, 1790 |
| FaqI | GGGAC | 2 cut(s) | 178, 1999 |
| FauNDI | CATATG | 3 cut(s) | 669, 831, 1688 |
| FbaI | TGATCA | 1 cut(s) | 2116 |
| FblI | GTMKAC | 5 cut(s) | 508, 724, 940, 1159, 1755 |
| Fnu4HI | GCNGC | 2 cut(s) | 1153, 1518 |
| FokI | GGATG | 2 cut(s) | 1490, 2301 |
| FriOI | GRGCYC | 1 cut(s) | 1444 |
| Fsp4HI | GCNGC | 2 cut(s) | 1153, 1518 |
| FspBI | CTAG | 5 cut(s) | 144, 882, 1703, 1751, 1829 |
| GlaI | GCGC | 3 cut(s) | 1455, 1516, 1908 |
| GluI | GCNGC | 2 cut(s) | 1153, 1518 |
| GsuI | CTGGAG | 2 cut(s) | 272, 339 |
| HaeII | RGCGCY | 2 cut(s) | 1457, 1518 |
| HaeIII | GGCC | 6 cut(s) | 570, 789, 1005, 2132, 2241, 2292 |
| HhaI | GCGC | 3 cut(s) | 1456, 1517, 1909 |
| Hin1I | GRCGYC | 1 cut(s) | 1454 |
| Hin6I | GCGC | 3 cut(s) | 1454, 1515, 1907 |
| HinP1I | GCGC | 3 cut(s) | 1454, 1515, 1907 |
| HindIII | AAGCTT | 1 cut(s) | 1721 |
| HinfI | GANTC | 8 cut(s) | 136, 151, 814, 1496, 1599, 1624, 1699, 2000 |
| Hpy166II | GTNNAC | 7 cut(s) | 45, 377, 509, 725, 941, 1160, 1756 |
| Hpy188III | TCNNGA | 9 cut(s) | 159, 289, 462, 897, 1113, 1572, 1805, 2180, 2318 |
| Hpy8I | GTNNAC | 7 cut(s) | 45, 377, 509, 725, 941, 1160, 1756 |
| HpyAV | CCTTC | 6 cut(s) | 111, 377, 429, 1566, 2144, 2269 |
| HpyCH4III | ACNGT | 3 cut(s) | 628, 1226, 1331 |
| HpyCH4IV | ACGT | 1 cut(s) | 2271 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 2243 |
| HpyF3I | CTNAG | 9 cut(s) | 268, 330, 393, 564, 1458, 1473, 1521, 1851, 1955 |
| HpySE526I | ACGT | 1 cut(s) | 2271 |
| Hsp92I | GRCGYC | 1 cut(s) | 1454 |
| HspAI | GCGC | 3 cut(s) | 1454, 1515, 1907 |
| KasI | GGCGCC | 1 cut(s) | 1453 |
| Ksp22I | TGATCA | 1 cut(s) | 2116 |
| LguI | GCTCTTC | 1 cut(s) | 301 |
| Lsp1109I | GCAGC | 2 cut(s) | 1164, 1504 |
| LweI | GCATC | 2 cut(s) | 1996, 2102 |
| MaeI | CTAG | 5 cut(s) | 144, 882, 1703, 1751, 1829 |
| MaeII | ACGT | 1 cut(s) | 2271 |
| MaeIII | GTNAC | 4 cut(s) | 261, 559, 572, 1640 |
| MflI | RGATCY | 4 cut(s) | 947, 2167, 2206, 2362 |
| MhlI | GDGCHC | 1 cut(s) | 1444 |
| MlsI | TGGCCA | 1 cut(s) | 2292 |
| MluNI | TGGCCA | 1 cut(s) | 2292 |
| Mly113I | GGCGCC | 1 cut(s) | 1454 |
| MlyI | GAGTC | 1 cut(s) | 160 |
| MmeI | TCCRAC | 3 cut(s) | 350, 385, 1870 |
| Mox20I | TGGCCA | 1 cut(s) | 2292 |
| Mph1103I | ATGCAT | 4 cut(s) | 36, 612, 831, 1266 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1411, 2086 |
| MscI | TGGCCA | 1 cut(s) | 2292 |
| MseI | TTAA | 4 cut(s) | 83, 302, 1836, 2374 |
| MslI | CAYNNNNRTG | 5 cut(s) | 29, 534, 753, 969, 1188 |
| Msp20I | TGGCCA | 1 cut(s) | 2292 |
| MspR9I | CCNGG | 3 cut(s) | 502, 2018, 2165 |
| Mva1269I | GAATGC | 1 cut(s) | 1276 |
| MvaI | CCWGG | 3 cut(s) | 502, 2018, 2165 |
| MvnI | CGCG | 1 cut(s) | 127 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 2243 |
| NarI | GGCGCC | 1 cut(s) | 1454 |
| NcoI | CCATGG | 1 cut(s) | 115 |
| NdeI | CATATG | 3 cut(s) | 669, 831, 1688 |
| NlaIV | GGNNCC | 2 cut(s) | 1455, 2169 |
| NmeAIII | GCCGAG | 1 cut(s) | 1049 |
| NmuCI | GTSAC | 1 cut(s) | 261 |
| NsiI | ATGCAT | 4 cut(s) | 36, 612, 831, 1266 |
| NspI | RCATGY | 4 cut(s) | 257, 533, 752, 1045 |
| PaeI | GCATGC | 2 cut(s) | 257, 1045 |
| PciSI | GCTCTTC | 1 cut(s) | 301 |
| PctI | GAATGC | 1 cut(s) | 1276 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1411, 2086 |
| PfeI | GAWTC | 7 cut(s) | 136, 814, 1496, 1599, 1624, 1699, 2000 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1382 |
| PfoI | TCCNGGA | 1 cut(s) | 2163 |
| PkrI | GCNGC | 2 cut(s) | 1154, 1519 |
| PleI | GAGTC | 1 cut(s) | 159 |
| PluTI | GGCGCC | 1 cut(s) | 1457 |
| PpsI | GAGTC | 1 cut(s) | 159 |
| Ppu21I | YACGTR | 1 cut(s) | 2272 |
| Psp124BI | GAGCTC | 1 cut(s) | 1444 |
| Psp6I | CCWGG | 3 cut(s) | 500, 2016, 2163 |
| PspEI | GGTNACC | 1 cut(s) | 261 |
| PspGI | CCWGG | 3 cut(s) | 500, 2016, 2163 |
| PspN4I | GGNNCC | 2 cut(s) | 1455, 2169 |
| PspPI | GGNCC | 5 cut(s) | 112, 568, 787, 1003, 2131 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 90, 122 |
| PsuI | RGATCY | 4 cut(s) | 947, 2167, 2206, 2362 |
| RsaI | GTAC | 6 cut(s) | 108, 478, 880, 1801, 1996, 2191 |
| RsaNI | GTAC | 6 cut(s) | 107, 477, 879, 1800, 1995, 2190 |
| RseI | CAYNNNNRTG | 5 cut(s) | 29, 534, 753, 969, 1188 |
| SacI | GAGCTC | 1 cut(s) | 1444 |
| SapI | GCTCTTC | 1 cut(s) | 301 |
| SaqAI | TTAA | 4 cut(s) | 83, 302, 1836, 2374 |
| SatI | GCNGC | 2 cut(s) | 1153, 1518 |
| Sau96I | GGNCC | 5 cut(s) | 112, 568, 787, 1003, 2131 |
| ScaI | AGTACT | 1 cut(s) | 880 |
| SchI | GAGTC | 1 cut(s) | 160 |
| ScrFI | CCNGG | 3 cut(s) | 502, 2018, 2165 |
| SduI | GDGCHC | 1 cut(s) | 1444 |
| SfaNI | GCATC | 2 cut(s) | 1996, 2102 |
| SfcI | CTRYAG | 1 cut(s) | 1756 |
| SfoI | GGCGCC | 1 cut(s) | 1455 |
| SinI | GGWCC | 1 cut(s) | 112 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 29, 534, 753, 969, 1188 |
| SmlI | CTYRAG | 1 cut(s) | 1910 |
| SmoI | CTYRAG | 1 cut(s) | 1910 |
| SpeI | ACTAGT | 2 cut(s) | 881, 1750 |
| SphI | GCATGC | 2 cut(s) | 257, 1045 |
| SsiI | CCGC | 4 cut(s) | 125, 715, 934, 1150 |
| SspDI | GGCGCC | 1 cut(s) | 1453 |
| SspI | AATATT | 1 cut(s) | 227 |
| SspMI | CTAG | 5 cut(s) | 144, 882, 1703, 1751, 1829 |
| SstI | GAGCTC | 1 cut(s) | 1444 |
| StyD4I | CCNGG | 3 cut(s) | 500, 2016, 2163 |
| StyI | CCWWGG | 2 cut(s) | 115, 1790 |
| TaaI | ACNGT | 3 cut(s) | 628, 1226, 1331 |
| TaiI | ACGT | 1 cut(s) | 2274 |
| TaqI | TCGA | 6 cut(s) | 160, 783, 928, 1144, 1463, 1634 |
| TaqII | GACCGA | 2 cut(s) | 356, 879 |
| TatI | WGTACW | 3 cut(s) | 106, 878, 1994 |
| TfiI | GAWTC | 7 cut(s) | 136, 814, 1496, 1599, 1624, 1699, 2000 |
| Tru1I | TTAA | 4 cut(s) | 83, 302, 1836, 2374 |
| Tru9I | TTAA | 4 cut(s) | 83, 302, 1836, 2374 |
| TscAI | CASTG | 1 cut(s) | 1066 |
| TseFI | GTSAC | 1 cut(s) | 261 |
| TseI | GCWGC | 2 cut(s) | 1152, 1517 |
| Tsp45I | GTSAC | 1 cut(s) | 261 |
| TspDTI | ATGAA | 6 cut(s) | 1404, 1548, 1671, 1686, 2045, 2295 |
| TspGWI | ACGGA | 2 cut(s) | 434, 650 |
| TspRI | CASTG | 1 cut(s) | 1066 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1382 |
| VpaK11BI | GGWCC | 1 cut(s) | 112 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2151 |
| XapI | RAATTY | 4 cut(s) | 61, 79, 425, 2326 |
| XceI | RCATGY | 4 cut(s) | 257, 533, 752, 1045 |
| XmiI | GTMKAC | 5 cut(s) | 508, 724, 940, 1159, 1755 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1411, 2086 |
| XspI | CTAG | 5 cut(s) | 144, 882, 1703, 1751, 1829 |
| ZrmI | AGTACT | 1 cut(s) | 880 |
| Zsp2I | ATGCAT | 4 cut(s) | 36, 612, 831, 1266 |