RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 380 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 170 |
| Alw26I | GTCTC | 1 cut(s) | 340 |
| ApeKI | GCWGC | 2 cut(s) | 40, 353 |
| BbvI | GCAGC | 2 cut(s) | 52, 365 |
| BclI | TGATCA | 1 cut(s) | 319 |
| BcoDI | GTCTC | 1 cut(s) | 340 |
| BglII | AGATCT | 1 cut(s) | 59 |
| BisI | GCNGC | 2 cut(s) | 41, 354 |
| BlsI | GCNGC | 2 cut(s) | 42, 355 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 170 |
| BmsI | GCATC | 3 cut(s) | 187, 214, 233 |
| BsaJI | CCNNGG | 1 cut(s) | 291 |
| BseDI | CCNNGG | 1 cut(s) | 291 |
| BseGI | GGATG | 1 cut(s) | 38 |
| BseXI | GCAGC | 2 cut(s) | 52, 365 |
| BsgI | GTGCAG | 1 cut(s) | 59 |
| BsmAI | GTCTC | 1 cut(s) | 340 |
| Bsp143I | GATC | 2 cut(s) | 59, 319 |
| BssECI | CCNNGG | 1 cut(s) | 291 |
| BssMI | GATC | 2 cut(s) | 59, 319 |
| BssT1I | CCWWGG | 1 cut(s) | 291 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 197, 362 |
| BstDEI | CTNAG | 1 cut(s) | 56 |
| BstF5I | GGATG | 1 cut(s) | 38 |
| BstKTI | GATC | 2 cut(s) | 62, 322 |
| BstMAI | GTCTC | 1 cut(s) | 340 |
| BstMBI | GATC | 2 cut(s) | 59, 319 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 197, 362 |
| BstV1I | GCAGC | 2 cut(s) | 52, 365 |
| BstX2I | RGATCY | 1 cut(s) | 59 |
| BstYI | RGATCY | 1 cut(s) | 59 |
| BtsCI | GGATG | 1 cut(s) | 38 |
| BtsI | GCAGTG | 1 cut(s) | 93 |
| BtsIMutI | CAGTG | 1 cut(s) | 93 |
| CviJI | RGCY | 4 cut(s) | 158, 185, 262, 328 |
| CviKI_1 | RGCY | 4 cut(s) | 158, 185, 262, 328 |
| DdeI | CTNAG | 1 cut(s) | 56 |
| DpnI | GATC | 2 cut(s) | 61, 321 |
| DpnII | GATC | 2 cut(s) | 59, 319 |
| DriI | GACNNNNNGTC | 1 cut(s) | 170 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 170 |
| Eco130I | CCWWGG | 1 cut(s) | 291 |
| EcoT14I | CCWWGG | 1 cut(s) | 291 |
| ErhI | CCWWGG | 1 cut(s) | 291 |
| FaiI | YATR | 6 cut(s) | 45, 71, 95, 117, 140, 315 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 246, 278 |
| FbaI | TGATCA | 1 cut(s) | 319 |
| Fnu4HI | GCNGC | 2 cut(s) | 41, 354 |
| FokI | GGATG | 1 cut(s) | 45 |
| Fsp4HI | GCNGC | 2 cut(s) | 41, 354 |
| GluI | GCNGC | 2 cut(s) | 41, 354 |
| Hpy166II | GTNNAC | 3 cut(s) | 128, 144, 178 |
| Hpy188I | TCNGA | 3 cut(s) | 229, 324, 340 |
| Hpy188III | TCNNGA | 1 cut(s) | 175 |
| Hpy8I | GTNNAC | 3 cut(s) | 128, 144, 178 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 4 cut(s) | 40, 200, 224, 365 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 197, 362 |
| HpyF3I | CTNAG | 1 cut(s) | 56 |
| Ksp22I | TGATCA | 1 cut(s) | 319 |
| Kzo9I | GATC | 2 cut(s) | 59, 319 |
| Lsp1109I | GCAGC | 2 cut(s) | 52, 365 |
| LweI | GCATC | 3 cut(s) | 187, 214, 233 |
| MalI | GATC | 2 cut(s) | 61, 321 |
| MboI | GATC | 2 cut(s) | 59, 319 |
| MflI | RGATCY | 1 cut(s) | 59 |
| MluCI | AATT | 2 cut(s) | 272, 375 |
| MnlI | CCTC | 3 cut(s) | 7, 76, 318 |
| MseI | TTAA | 2 cut(s) | 297, 330 |
| MslI | CAYNNNNRTG | 1 cut(s) | 78 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 197, 362 |
| NdeII | GATC | 2 cut(s) | 59, 319 |
| PkrI | GCNGC | 2 cut(s) | 42, 355 |
| PsuI | RGATCY | 1 cut(s) | 59 |
| RseI | CAYNNNNRTG | 1 cut(s) | 78 |
| SaqAI | TTAA | 2 cut(s) | 297, 330 |
| SatI | GCNGC | 2 cut(s) | 41, 354 |
| Sau3AI | GATC | 2 cut(s) | 59, 319 |
| SetI | ASST | 2 cut(s) | 154, 297 |
| SfaNI | GCATC | 3 cut(s) | 187, 214, 233 |
| SgeI | CNNG | 8 cut(s) | 75, 179, 187, 193, 231, 257, 304, 349 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 78 |
| Sse9I | AATT | 2 cut(s) | 272, 375 |
| SspI | AATATT | 2 cut(s) | 20, 360 |
| StyI | CCWWGG | 1 cut(s) | 291 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TasI | AATT | 2 cut(s) | 272, 375 |
| Tru1I | TTAA | 2 cut(s) | 297, 330 |
| Tru9I | TTAA | 2 cut(s) | 297, 330 |
| TscAI | CASTG | 1 cut(s) | 93 |
| TseI | GCWGC | 2 cut(s) | 40, 353 |
| TspRI | CASTG | 1 cut(s) | 93 |