RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 27 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 31 |
| AluBI | AGCT | 1 cut(s) | 59 |
| AluI | AGCT | 1 cut(s) | 59 |
| Alw21I | GWGCWC | 1 cut(s) | 61 |
| AlwI | GGATC | 1 cut(s) | 27 |
| BanII | GRGCYC | 1 cut(s) | 61 |
| Bbv12I | GWGCWC | 1 cut(s) | 61 |
| BccI | CCATC | 2 cut(s) | 10, 131 |
| BfaI | CTAG | 1 cut(s) | 75 |
| BmsI | GCATC | 1 cut(s) | 100 |
| BpuEI | CTTGAG | 1 cut(s) | 45 |
| BsaJI | CCNNGG | 1 cut(s) | 5 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 31 |
| BseDI | CCNNGG | 1 cut(s) | 5 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 31 |
| BsiHKAI | GWGCWC | 1 cut(s) | 61 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 31 |
| Bsp1286I | GDGCHC | 1 cut(s) | 61 |
| Bsp143I | GATC | 1 cut(s) | 19 |
| BspPI | GGATC | 1 cut(s) | 27 |
| BssECI | CCNNGG | 1 cut(s) | 5 |
| BssMI | GATC | 1 cut(s) | 19 |
| BstKTI | GATC | 1 cut(s) | 22 |
| BstMBI | GATC | 1 cut(s) | 19 |
| BstX2I | RGATCY | 1 cut(s) | 19 |
| BstYI | RGATCY | 1 cut(s) | 19 |
| BtsI | GCAGTG | 1 cut(s) | 120 |
| BtsIMutI | CAGTG | 1 cut(s) | 120 |
| CviJI | RGCY | 2 cut(s) | 59, 125 |
| CviKI_1 | RGCY | 2 cut(s) | 59, 125 |
| DpnI | GATC | 1 cut(s) | 21 |
| DpnII | GATC | 1 cut(s) | 19 |
| Ecl136II | GAGCTC | 1 cut(s) | 59 |
| Eco24I | GRGCYC | 1 cut(s) | 61 |
| Eco53kI | GAGCTC | 1 cut(s) | 59 |
| EcoICRI | GAGCTC | 1 cut(s) | 59 |
| EcoT38I | GRGCYC | 1 cut(s) | 61 |
| FaiI | YATR | 4 cut(s) | 44, 46, 48, 80 |
| FriOI | GRGCYC | 1 cut(s) | 61 |
| FspBI | CTAG | 1 cut(s) | 75 |
| Hpy166II | GTNNAC | 1 cut(s) | 118 |
| Hpy188III | TCNNGA | 1 cut(s) | 62 |
| Hpy8I | GTNNAC | 1 cut(s) | 118 |
| HpyAV | CCTTC | 1 cut(s) | 29 |
| HpyCH4V | TGCA | 2 cut(s) | 86, 113 |
| Kzo9I | GATC | 1 cut(s) | 19 |
| LweI | GCATC | 1 cut(s) | 100 |
| MaeI | CTAG | 1 cut(s) | 75 |
| MalI | GATC | 1 cut(s) | 21 |
| MboI | GATC | 1 cut(s) | 19 |
| MfeI | CAATTG | 1 cut(s) | 99 |
| MflI | RGATCY | 1 cut(s) | 19 |
| MhlI | GDGCHC | 1 cut(s) | 61 |
| MluCI | AATT | 1 cut(s) | 99 |
| MunI | CAATTG | 1 cut(s) | 99 |
| NdeII | GATC | 1 cut(s) | 19 |
| NmeAIII | GCCGAG | 1 cut(s) | 30 |
| Psp124BI | GAGCTC | 1 cut(s) | 61 |
| PsuI | RGATCY | 1 cut(s) | 19 |
| SacI | GAGCTC | 1 cut(s) | 61 |
| Sau3AI | GATC | 1 cut(s) | 19 |
| SduI | GDGCHC | 1 cut(s) | 61 |
| SetI | ASST | 2 cut(s) | 61, 94 |
| SfaNI | GCATC | 1 cut(s) | 100 |
| SgeI | CNNG | 5 cut(s) | 18, 74, 87, 119, 133 |
| SmlI | CTYRAG | 1 cut(s) | 60 |
| SmoI | CTYRAG | 1 cut(s) | 60 |
| Sse9I | AATT | 1 cut(s) | 99 |
| SspMI | CTAG | 1 cut(s) | 75 |
| SstI | GAGCTC | 1 cut(s) | 61 |
| TasI | AATT | 1 cut(s) | 99 |
| TscAI | CASTG | 1 cut(s) | 120 |
| TspRI | CASTG | 1 cut(s) | 120 |
| XspI | CTAG | 1 cut(s) | 75 |