pycom16g12210
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0000472
Physical Location & Seq
Reverse (-)
8506227 .. 8511153
4927 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3294 bp
ATGATTGTAGGTCCTACAAAAACTCTGTTTATGGATGAAATATCAACTGGATTAGACAGCTCGACGACCTTTCAGATAGTTACCTATCTTCAGCAGTTGGTGCACATCACAGATGCAACTGCATTGGTTTCACTCCTTCAACCAGCCCCTGAGACCTTTGATCTATTTGATGATGTAATATTAATGACAGAGGGGAAGATAGTTTACCACGGTCCTCGTAGCCAGGCACTTCAGTTTTTCGAAGATTGTGGTTTCAAATGCCCAGCAAGAAAGGGTGCTGCAGATTTCCTTCAAGAGGTAATCTCAAAGAAGGATCAAGCACAATACTGGAAGCATACCAACATTCCCTACGATTTTGTTTCAGTGGATCAATTTTCTCAACTTTTCAGAGAAAGTTACCTGGGGAAGAAGTTAAATGATGAGCTTTCGGAACCATATGATAAATCACAGTGCCATGAAAAGGCCCTATCATTTACCACTTACTCAGTGAGAAAAAGGGAATTGTTCAAAGCTTGTATGGGCCGAGAGCTGCTTCTTATGAAACGAAATTCCTTTGTATACGTATTCAAAACAGTGCAGCTTACCATCATTGCATTTATTACAATGACGGTATTTATACGAACTCAAATGGCTGTGGATCTGACAAGTGCAAATTTTTTGATGGGCTCATTGTTTTATACCCTCGTTCGACATATGACCAATGGAGTTGCAGAGCTGTCCTTGACTGTTACTAGACTTCCAGTTGTTTACAAGCAAAGGGGATTCTATCTGTACCCGGCATGGGCGTATTGTATTCCAGCTTCTCTCGTGAAGGTTCCATTTTCGCTACTTGATTCAGCACTATGGACAGCCATAACTTACTACGTTATTGGGTTTAGCCCGGAAATAACAAGGTTCTTCCGTCAGTTTCTTGTGCTATTTGCTCTGCATCAATCATCAACATCAATGTGTCGTTTAGTCGCTGTAATCTTCCGAACTATGGTTCTTGCATCAACTTGTGGTACTTTCATGTTAGTGGTAATGTTTTTATGTGGAGGCTTCGTTTTGCCACAACCCTCTTTACCTTCTTGGTTGAGGTGGGGATTCTGGTGTTCTCCTATGACTTATGCAGAAATAGGTACAACTCTAAACGAATTCCTTGCTCCTCGATGGCAAAAGGTTACAAATGGAAACACAACCTTAGGAAATGAAGTTCTAACCAGACATGGATTGAATTTTGATGGCTATTTCTTTTGGATATCGGTTGGAGCACTGTTTGCGTTCACAGCACTTTTCGATCTTGGATTTGTTTTAGCCTTGACTTACCAAAATCCTACAAAGATGTCTCGCGCAATTATTTCGGGAAAAAGGTTATCCAAATTACAAGGAAAGGATGCTTGCAACACCAGTGAACAGTCGGAAAATGAAGCAACTCCAGCTTATTCTTCCCAAACTGTGCGAGGAAAATTCAACTGCGGGAGGATGGTCCTGCCATTTGAGCCACTGACAATCTCATTCAAGGATGTGCAGTATTACGTTGCAACCACGCCGGAAATGAGAGAGCATGGATTCAAGCAGAAAAAGCTTCAGCTGCTTAAAGACATTAATGGAGCATTCAGACCGGGAATTCTCACAGCACTGATGGGTGTGAGTGGGGCTGGAAAAACAACTCTTATGGATGTTCTTTCGGGAAGGAAAACCGGAGGTACCATTGAGGGAGATATAAGAATAGGAGGGTATCCGAAGGTCCAGAAGACATTTGCAAGAATATCGGGTTACTGCGAGCAGACTGACATACATTCTCCACTTATCACAGTAGAAGAATCGGTTAGGTACTCGGCTTGGTTGCGGTTGCCACCCGAAACTAATCAAGACTCAAAAGCTAGATTTGTGGAAGAAGTAATCGAAACAATTGAACTGGAGGATATAAGAGATTCTTTAGTTGGCATTCCTGGACAAAGTGGCCTATCAACCGAGCAGCGTAAAAGGCTGACAATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATATTCATGGATGAACCTACATCAGGTTTAGATGCTAGAGCAGCTGCGATTGTCATGCGTGCAGTGAAGAACGTCGTTGCCACAGGAAGAACAACTGTGTGCACAATTCACCAACCAAGCATTGATATCTTCGAGTCTTTCAATGAGTTAATTTTGATGAAAACGGGTGGACAAATCATCTATTCGGGAGCTCTTGGTCATAACTCGAGTGAACTCATCGAATATTTTGAGCGGATTCCTAATGTACCAAAGATCAAAGACAATTACAACCCGGCAACATGGATGTTAGAAGTTACTTCTGCTTCGGTAGAGGCAGAACTCGGTTTGGATTTTGCCAGCATCTATAAAAATTCTACTAAGTATAGAGACACAATTGAGTTGGTAAAACAGTTGAGTGAAGCAAAGCCAGGTTCAAAAGACTTGCACTTTCCCACTCATTTTCCCCAAAATAGTTGGGTGCAGTTCAAGGCCTGCCTTTGGAAACAACACTTGTCCTATTGGAGAAGTACCGAATACAATCTAGCGCGTTTCATGTTCATGATCGCTGTATCAGTCATGTTTGGGGTAATCTTCTGGCAGAAAGGGAAGGAAATAAATAATGAGCAGGATTTGTTGAACGTACTTGGGTCCATGTACATTGCCGTAATATTCCTAGGAATAATCAATTGCTCAGGAGTTCTGCCTTATATCGCAACTGAGCGCACTGTTTTGTACCGTGAAAGGTTTGCCGGGATGTACTCATCAAAGGCTTATTCATTTGCACAGGTTGCCGTTGAAATACCTTACACAATGTTGCAAGCAATTTTGTATGTGGCTATTACATATCCTACCATAGGGTTCTTTTGGTCACCTACTAAGGTTTTCTGGTACTTATATGCAACATTTTGCACATTTCTATACTTTGTATATCTTGGGATGCTGATAGCTTCTTTGAGCACAAACCTCGACGTAGCTTCCATTCTGGCGACTGCAGTCTACACCTTACTGAATCTTTTTGCCGGCTTCCTCATGCCCGGACCGAAAATTCCAAAGTGGTGGGTTTGGTGCTATTGGATATGTCCTACATCATGGTCCCTAAATGGCCTACTGACTTCACAATATGGAGACATGAGCAAAGAAATAGTGATCTTTGAGGAGCATAAAACCGTTGGTTTCTTCCTACAAGATTACTTTGGTTTCCACCATGATCGTTTAGGCCTTGTGGCTCTTGCTCTCATTGCTTTCCCAATTGTTTTTGCTTCCCTATTTGCCTATTGCATTGGGAAATTAAATTTCCAAAGAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1098

Amino Acids

124.19

Weight (kDa)

8.46

Isoelectric Point (pI)

37.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC2_membrane PF01061 168 - 379 1.6e-42 ABC-2 type transporter
PDR_assoc PF08370 384 - 446 3e-22 Plant PDR ABC transporter associated
ABC_tran PF00005 525 - 677 2e-20 ABC transporter
ABC2_membrane PF01061 823 - 1036 1.8e-57 ABC-2 type transporter
ABC2_membrane_3 PF12698 871 - 1086 1.2e-06 ABC-2 family transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15215 AT4G15230 AT4G15230 AT4G15230 AT4G15230 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15233 AT4G15236
fragaria_vesca FvH4_4g21360 FvH4_4g21360 FvH4_4g21390 FvH4_6g49431 FvH4_6g49450
malus_domestica MD09G1044300.v1.1 MD16G1137900.v1.1 MD16G1138000.v1.1
prunus_persica Prupe.1G106800_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.1G106900_v2.0.a1 Prupe.3G273300_v2.0.a1
pyrus_communis pycom111g03460 pycom16g12210
rosa_chinensis RchiOBHm_Chr2g0169331 RchiOBHm_Chr2g0169361 RchiOBHm_Chr2g0169371 RchiOBHm_Chr2g0169381 RchiOBHm_Chr2g0169411 RchiOBHm_Chr4g0427141 RchiOBHm_Chr4g0427321
rosa_laevigata RLG00000007252 RLG00000007258 RLG00000013974 RLG00000021856 RLG00000021857 RLG00000021858 RLG00000021859
rosa_multiflora Rmu_sc0000648.1_g000007 Rmu_sc0000648.1_g000009 Rmu_sc0003813.1_g000016 Rmu_sc0009165.1_g000008 Rmu_sc0022554.1_g000001
rosa_roxburghii Rroxscaffold_2G00082200 Rroxscaffold_2G00082230 Rroxscaffold_5G00368960 Rroxscaffold_5G00369010 Rroxscaffold_7G00200390
rosa_rugosa Rorug02G0539500 Rorug02G0539600 Rorug02G0539700 Rorug04G0216400 Rorug04G0216500 Rorug04G0216500 Rorug04G0216600
rosa_samantha Rh2AG610800 Rh2AG611000 Rh2AG611100 Rh2CG592800 Rh2CG593000 Rh2CG593200 Rh2DG634900 Rh2DG635100 Rh2DG635200 Rh2DG635400 Rh4AG272200 Rh4AG272900 Rh4DG275600 Rh4DG276000
rosa_wichuraiana Rw2G050640 Rw2G050660 Rw2G050670 Rw2G050680 Rw4G023610 Rw4G023680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1685
AccB1I GGYRCC 1 cut(s) 1685
AccBSI CCGCTC 1 cut(s) 2239
AccI GTMKAC 2 cut(s) 558, 2982
AccII CGCG 2 cut(s) 1329, 2533
AciI CCGC 3 cut(s) 1455, 1828, 2239
AclWI GGATC 3 cut(s) 321, 375, 645
AcsI RAATTY 9 cut(s) 547, 652, 1133, 1213, 1445, 1605, 2356, 3030, 3277
AcuI CTGAAG 3 cut(s) 74, 215, 1550
AfiI CCNNNNNNNGG 7 cut(s) 295, 460, 781, 979, 2030, 2484, 2840
AjnI CCWGG 4 cut(s) 222, 399, 1930, 2413
AloI GAACNNNNNNTCC 2 cut(s) 1176, 1208
Alw21I GWGCWC 5 cut(s) 105, 1252, 2111, 2200, 2945
Alw26I GTCTC 4 cut(s) 146, 1329, 2367, 3105
Alw44I GTGCAC 2 cut(s) 101, 2107
AlwI GGATC 3 cut(s) 321, 375, 645
AlwNI CAGNNNCTG 1 cut(s) 149
Ama87I CYCGRG 1 cut(s) 2212
AoxI GGCC 6 cut(s) 462, 520, 1942, 2475, 3088, 3202
ApaLI GTGCAC 2 cut(s) 101, 2107
ApeKI GCWGC 7 cut(s) 278, 529, 577, 1570, 1957, 2048, 2051
ApoI RAATTY 9 cut(s) 547, 652, 1133, 1213, 1445, 1605, 2356, 3030, 3277
AseI ATTAAT 2 cut(s) 182, 1584
Asp718I GGTACC 1 cut(s) 1685
AspA2I CCTAGG 1 cut(s) 2659
AspLEI GCGC 3 cut(s) 1331, 2533, 2709
AspS9I GGNCC 9 cut(s) 11, 212, 463, 520, 1465, 1726, 2634, 3023, 3078
AsuC2I CCSGG 6 cut(s) 776, 881, 1602, 2279, 2737, 3021
AsuHPI GGTGA 2 cut(s) 2108, 2847
AsuII TTCGAA 1 cut(s) 240
AvaI CYCGRG 1 cut(s) 2212
AvaII GGWCC 7 cut(s) 11, 212, 1465, 1726, 2634, 3023, 3078
AvrII CCTAGG 1 cut(s) 2659
AxyI CCTNAGG 1 cut(s) 1180
BaeGI GKGCMC 2 cut(s) 105, 2111
BanI GGYRCC 1 cut(s) 1685
BanII GRGCYC 2 cut(s) 668, 2200
BarI GAAGNNNNNNTAC 4 cut(s) 188, 220, 784, 816
BauI CACGAG 1 cut(s) 806
BbsI GAAGAC 1 cut(s) 1739
Bbv12I GWGCWC 5 cut(s) 105, 1252, 2111, 2200, 2945
BbvI GCAGC 7 cut(s) 265, 516, 589, 1557, 1969, 2038, 2060
BccI CCATC 7 cut(s) 593, 655, 1143, 1214, 1456, 1615, 2008
BceAI ACGGC 2 cut(s) 2633, 2762
BciT130I CCWGG 4 cut(s) 224, 401, 1932, 2415
BciVI GTATCC 1 cut(s) 1728
BcnI CCSGG 6 cut(s) 776, 881, 1602, 2279, 2737, 3021
BcoDI GTCTC 4 cut(s) 146, 1329, 2367, 3105
BfaI CTAG 5 cut(s) 732, 1863, 2043, 2528, 2660
BfmI CTRYAG 2 cut(s) 279, 2976
BfuI GTATCC 1 cut(s) 1728
BisI GCNGC 7 cut(s) 279, 530, 578, 1571, 1958, 2049, 2052
BlnI CCTAGG 1 cut(s) 2659
BlsI GCNGC 7 cut(s) 280, 531, 579, 1572, 1959, 2050, 2053
Bme18I GGWCC 7 cut(s) 11, 212, 1465, 1726, 2634, 3023, 3078
BmeT110I CYCGRG 1 cut(s) 2212
BmgT120I GGNCC 9 cut(s) 11, 212, 463, 520, 1465, 1726, 2634, 3023, 3078
BmiI GGNNCC 5 cut(s) 432, 816, 1687, 2635, 3080
BmsI GCATC 7 cut(s) 103, 937, 998, 1363, 2029, 2355, 2913
BoxI GACNNNNGTC 1 cut(s) 2978
BpiI GAAGAC 1 cut(s) 1739
BplI GAGNNNNNCTC 2 cut(s) 287, 319
BpmI CTGGAG 2 cut(s) 1398, 1919
Bpu10I CCTNAGC 1 cut(s) 2677
Bpu14I TTCGAA 1 cut(s) 240
BpuMI CCSGG 6 cut(s) 776, 881, 1602, 2279, 2737, 3021
BsaAI YACGTR 1 cut(s) 562
BsaI GGTCTC 1 cut(s) 146
BsaJI CCNNGG 3 cut(s) 208, 400, 2659
BsaWI WCCGGW 1 cut(s) 1679
BsaXI ACNNNNNCTCC 2 cut(s) 1026, 1056
Bsc4I CCNNNNNNNGG 7 cut(s) 295, 460, 781, 979, 2030, 2484, 2840
Bse118I RCCGGY 1 cut(s) 3005
Bse1I ACTGG 5 cut(s) 52, 332, 740, 1386, 1902
Bse21I CCTNAGG 1 cut(s) 1180
Bse3DI GCAATG 3 cut(s) 588, 2643, 3222
BseBI CCWGG 4 cut(s) 224, 401, 1932, 2415
BseDI CCNNGG 3 cut(s) 208, 400, 2659
BseGI GGATG 9 cut(s) 40, 1378, 1467, 1507, 1663, 2023, 2295, 2745, 2928
BseLI CCNNNNNNNGG 7 cut(s) 295, 460, 781, 979, 2030, 2484, 2840
BseMI GCAATG 3 cut(s) 588, 2643, 3222
BseMII CTCAG 4 cut(s) 141, 498, 2691, 2694
BseNI ACTGG 5 cut(s) 52, 332, 740, 1386, 1902
BseRI GAGGAG 2 cut(s) 1134, 3155
BseSI GKGCMC 2 cut(s) 105, 2111
BseXI GCAGC 7 cut(s) 265, 516, 589, 1557, 1969, 2038, 2060
BseYI CCCAGC 1 cut(s) 262
BsgI GTGCAG 4 cut(s) 596, 1526, 2088, 2486
Bsh1236I CGCG 2 cut(s) 1329, 2533
BshFI GGCC 6 cut(s) 464, 522, 1944, 2477, 3090, 3204
BshNI GGYRCC 1 cut(s) 1685
BsiHKAI GWGCWC 5 cut(s) 105, 1252, 2111, 2200, 2945
BsiHKCI CYCGRG 1 cut(s) 2212
BsiSI CCGG 9 cut(s) 776, 881, 1529, 1601, 1680, 2279, 2736, 3006, 3021
BslFI GGGAC 1 cut(s) 3064
BslI CCNNNNNNNGG 7 cut(s) 295, 460, 781, 979, 2030, 2484, 2840
BsmAI GTCTC 4 cut(s) 146, 1329, 2367, 3105
BsmFI GGGAC 1 cut(s) 3064
BsmI GAATGC 2 cut(s) 1592, 1926
BsnI GGCC 6 cut(s) 464, 522, 1944, 2477, 3090, 3204
Bso31I GGTCTC 1 cut(s) 146
BsoBI CYCGRG 1 cut(s) 2212
Bsp119I TTCGAA 1 cut(s) 240
Bsp1286I GDGCHC 6 cut(s) 105, 668, 1252, 2111, 2200, 2945
Bsp1407I TGTACA 1 cut(s) 2640
Bsp143I GATC 9 cut(s) 160, 313, 367, 637, 1276, 2259, 2547, 3132, 3193
BspACI CCGC 3 cut(s) 1455, 1828, 2239
BspANI GGCC 6 cut(s) 464, 522, 1944, 2477, 3090, 3204
BspCNI CTCAG 4 cut(s) 142, 497, 2690, 2695
BspFNI CGCG 2 cut(s) 1329, 2533
BspHI TCATGA 1 cut(s) 2544
BspLI GGNNCC 5 cut(s) 432, 816, 1687, 2635, 3080
BspMAI CTGCAG 2 cut(s) 283, 2980
BspPI GGATC 3 cut(s) 321, 375, 645
BspT104I TTCGAA 1 cut(s) 240
BspT107I GGYRCC 1 cut(s) 1685
BspTNI GGTCTC 1 cut(s) 146
BsrBI CCGCTC 1 cut(s) 2239
BsrDI GCAATG 3 cut(s) 588, 2643, 3222
BsrFI RCCGGY 1 cut(s) 3005
BsrGI TGTACA 1 cut(s) 2640
BsrI ACTGG 5 cut(s) 52, 332, 740, 1386, 1902
BssAI RCCGGY 1 cut(s) 3005
BssECI CCNNGG 3 cut(s) 208, 400, 2659
BssMI GATC 9 cut(s) 160, 313, 367, 637, 1276, 2259, 2547, 3132, 3193
BssNAI GTATAC 1 cut(s) 559
BssSI CACGAG 1 cut(s) 806
BssT1I CCWWGG 1 cut(s) 2659
Bst1107I GTATAC 1 cut(s) 559
Bst2BI CACGAG 1 cut(s) 806
Bst2UI CCWGG 4 cut(s) 224, 401, 1932, 2415
BstAPI GCANNNNNTGC 3 cut(s) 100, 1256, 2774
BstAUI TGTACA 1 cut(s) 2640
BstBAI YACGTR 1 cut(s) 562
BstBI TTCGAA 1 cut(s) 240
BstC8I GCNNGC 7 cut(s) 1378, 1763, 2067, 2344, 2479, 2805, 3007
BstDEI CTNAG 7 cut(s) 150, 484, 1180, 2364, 2677, 2703, 2862
BstDSI CCRYGG 1 cut(s) 208
BstEII GGTNACC 1 cut(s) 2853
BstENI CCTNNNNNAGG 3 cut(s) 293, 2028, 2838
BstF5I GGATG 9 cut(s) 40, 1378, 1467, 1507, 1663, 2023, 2295, 2745, 2928
BstFNI CGCG 2 cut(s) 1329, 2533
BstHHI GCGC 3 cut(s) 1331, 2533, 2709
BstKTI GATC 9 cut(s) 163, 316, 370, 640, 1279, 2262, 2550, 3135, 3196
BstMAI GTCTC 4 cut(s) 146, 1329, 2367, 3105
BstMBI GATC 9 cut(s) 160, 313, 367, 637, 1276, 2259, 2547, 3132, 3193
BstNI CCWGG 4 cut(s) 224, 401, 1932, 2415
BstPAI GACNNNNGTC 1 cut(s) 2978
BstPI GGTNACC 1 cut(s) 2853
BstSFI CTRYAG 2 cut(s) 279, 2976
BstSLI GKGCMC 2 cut(s) 105, 2111
BstSNI TACGTA 1 cut(s) 562
BstUI CGCG 2 cut(s) 1329, 2533
BstV1I GCAGC 7 cut(s) 265, 516, 589, 1557, 1969, 2038, 2060
BstV2I GAAGAC 1 cut(s) 1739
BstX2I RGATCY 1 cut(s) 637
BstXI CCANNNNNNTGG 1 cut(s) 3042
BstYI RGATCY 1 cut(s) 637
BstZ17I GTATAC 1 cut(s) 559
Bsu36I CCTNAGG 1 cut(s) 1180
BsuI GTATCC 1 cut(s) 1728
BsuRI GGCC 6 cut(s) 464, 522, 1944, 2477, 3090, 3204
BtgI CCRYGG 1 cut(s) 208
BtsCI GGATG 9 cut(s) 40, 1378, 1467, 1507, 1663, 2023, 2295, 2745, 2928
BtsI GCAGTG 2 cut(s) 1986, 2076
Cac8I GCNNGC 7 cut(s) 1378, 1763, 2067, 2344, 2479, 2805, 3007
CaiI CAGNNNCTG 1 cut(s) 149
CciI TCATGA 1 cut(s) 2544
CfoI GCGC 3 cut(s) 1331, 2533, 2709
Cfr10I RCCGGY 1 cut(s) 3005
Cfr13I GGNCC 9 cut(s) 11, 212, 463, 520, 1465, 1726, 2634, 3023, 3078
CpoI CGGWCCG 1 cut(s) 3023
CspCI CAANNNNNGTGG 2 cut(s) 1962, 1997
CspI CGGWCCG 1 cut(s) 3023
DdeI CTNAG 7 cut(s) 150, 484, 1180, 2364, 2677, 2703, 2862
DpnI GATC 9 cut(s) 162, 315, 369, 639, 1278, 2261, 2549, 3134, 3195
DpnII GATC 9 cut(s) 160, 313, 367, 637, 1276, 2259, 2547, 3132, 3193
Ecl136II GAGCTC 1 cut(s) 2198
Eco105I TACGTA 1 cut(s) 562
Eco130I CCWWGG 1 cut(s) 2659
Eco147I AGGCCT 2 cut(s) 2477, 3204
Eco24I GRGCYC 2 cut(s) 668, 2200
Eco31I GGTCTC 1 cut(s) 146
Eco32I GATATC 2 cut(s) 1239, 2134
Eco47I GGWCC 7 cut(s) 11, 212, 1465, 1726, 2634, 3023, 3078
Eco53kI GAGCTC 1 cut(s) 2198
Eco57I CTGAAG 3 cut(s) 74, 215, 1550
Eco81I CCTNAGG 1 cut(s) 1180
Eco88I CYCGRG 1 cut(s) 2212
Eco91I GGTNACC 1 cut(s) 2853
EcoICRI GAGCTC 1 cut(s) 2198
EcoNI CCTNNNNNAGG 3 cut(s) 293, 2028, 2838
EcoO109I RGGNCCY 2 cut(s) 11, 463
EcoO65I GGTNACC 1 cut(s) 2853
EcoRI GAATTC 2 cut(s) 1133, 1605
EcoRII CCWGG 4 cut(s) 222, 399, 1930, 2413
EcoRV GATATC 2 cut(s) 1239, 2134
EcoT14I CCWWGG 1 cut(s) 2659
EcoT38I GRGCYC 2 cut(s) 668, 2200
ErhI CCWWGG 1 cut(s) 2659
FalI AAGNNNNNCTT 2 cut(s) 1900, 1932
FaqI GGGAC 1 cut(s) 3064
FauI CCCGC 1 cut(s) 1448
FauNDI CATATG 2 cut(s) 436, 693
FblI GTMKAC 2 cut(s) 558, 2982
Fnu4HI GCNGC 7 cut(s) 279, 530, 578, 1571, 1958, 2049, 2052
FokI GGATG 9 cut(s) 47, 1385, 1474, 1514, 1670, 2030, 2302, 2752, 2935
FriOI GRGCYC 2 cut(s) 668, 2200
Fsp4HI GCNGC 7 cut(s) 279, 530, 578, 1571, 1958, 2049, 2052
FspBI CTAG 5 cut(s) 732, 1863, 2043, 2528, 2660
GlaI GCGC 3 cut(s) 1330, 2532, 2708
GluI GCNGC 7 cut(s) 279, 530, 578, 1571, 1958, 2049, 2052
GsaI CCCAGC 1 cut(s) 266
GsuI CTGGAG 2 cut(s) 1398, 1919
HaeIII GGCC 6 cut(s) 464, 522, 1944, 2477, 3090, 3204
HapII CCGG 9 cut(s) 776, 881, 1529, 1601, 1680, 2279, 2736, 3006, 3021
HhaI GCGC 3 cut(s) 1331, 2533, 2709
Hin6I GCGC 3 cut(s) 1329, 2531, 2707
HinP1I GCGC 3 cut(s) 1329, 2531, 2707
HindIII AAGCTT 2 cut(s) 510, 1562
HpaII CCGG 9 cut(s) 776, 881, 1529, 1601, 1680, 2279, 2736, 3006, 3021
HphI GGTGA 2 cut(s) 2108, 2847
Hpy188I TCNGA 8 cut(s) 75, 389, 430, 642, 974, 1399, 1598, 1722
Hpy188III TCNNGA 9 cut(s) 293, 808, 1341, 1668, 1729, 1850, 2193, 2545, 2679
Hpy99I CGWCG 3 cut(s) 67, 2084, 2957
HpyAV CCTTC 8 cut(s) 146, 299, 304, 805, 1074, 1665, 1717, 2587
HpyCH4IV ACGT 6 cut(s) 561, 864, 1515, 2079, 2625, 2955
HpyF3I CTNAG 7 cut(s) 150, 484, 1180, 2364, 2677, 2703, 2862
HpySE526I ACGT 6 cut(s) 561, 864, 1515, 2079, 2625, 2955
HspAI GCGC 3 cut(s) 1329, 2531, 2707
KpnI GGTACC 1 cut(s) 1689
KroI GCCGGC 1 cut(s) 3005
KroNI GCCGGC 1 cut(s) 3007
Kzo9I GATC 9 cut(s) 160, 313, 367, 637, 1276, 2259, 2547, 3132, 3193
LmnI GCTCC 6 cut(s) 1147, 1247, 1589, 1984, 2195, 3142
Lsp1109I GCAGC 7 cut(s) 265, 516, 589, 1557, 1969, 2038, 2060
LweI GCATC 7 cut(s) 103, 937, 998, 1363, 2029, 2355, 2913
MaeI CTAG 5 cut(s) 732, 1863, 2043, 2528, 2660
MaeII ACGT 6 cut(s) 561, 864, 1515, 2079, 2625, 2955
MaeIII GTNAC 7 cut(s) 79, 395, 727, 1159, 1754, 2299, 2853
MalI GATC 9 cut(s) 162, 315, 369, 639, 1278, 2261, 2549, 3134, 3195
MbiI CCGCTC 1 cut(s) 2239
MboI GATC 9 cut(s) 160, 313, 367, 637, 1276, 2259, 2547, 3132, 3193
MfeI CAATTG 5 cut(s) 1890, 1974, 2379, 2671, 3234
MflI RGATCY 1 cut(s) 637
MhlI GDGCHC 6 cut(s) 105, 668, 1252, 2111, 2200, 2945
MlyI GAGTC 2 cut(s) 1847, 2150
MmeI TCCRAC 2 cut(s) 1225, 1377
MroNI GCCGGC 1 cut(s) 3005
MseI TTAA 6 cut(s) 182, 413, 1575, 1584, 2156, 3275
MslI CAYNNNNRTG 3 cut(s) 946, 1013, 2543
MspA1I CMGCKG 2 cut(s) 1570, 2051
MspI CCGG 9 cut(s) 776, 881, 1529, 1601, 1680, 2279, 2736, 3006, 3021
MunI CAATTG 5 cut(s) 1890, 1974, 2379, 2671, 3234
Mva1269I GAATGC 2 cut(s) 1592, 1926
MvaI CCWGG 4 cut(s) 224, 401, 1932, 2415
MvnI CGCG 2 cut(s) 1329, 2533
NaeI GCCGGC 1 cut(s) 3007
NciI CCSGG 6 cut(s) 776, 881, 1602, 2279, 2737, 3021
NdeI CATATG 2 cut(s) 436, 693
NdeII GATC 9 cut(s) 160, 313, 367, 637, 1276, 2259, 2547, 3132, 3193
NgoMIV GCCGGC 1 cut(s) 3005
NlaIV GGNNCC 5 cut(s) 432, 816, 1687, 2635, 3080
NmeAIII GCCGAG 2 cut(s) 548, 1796
NmuCI GTSAC 1 cut(s) 2853
NspV TTCGAA 1 cut(s) 240
PaeR7I CTCGAG 1 cut(s) 2212
PagI TCATGA 1 cut(s) 2544
PceI AGGCCT 2 cut(s) 2477, 3204
PctI GAATGC 2 cut(s) 1592, 1926
PdiI GCCGGC 1 cut(s) 3007
PfeI GAWTC 8 cut(s) 762, 833, 1083, 1548, 1802, 1913, 2242, 2995
PfoI TCCNGGA 1 cut(s) 1930
PkrI GCNGC 7 cut(s) 280, 531, 579, 1572, 1959, 2050, 2053
PleI GAGTC 2 cut(s) 1847, 2149
PpsI GAGTC 2 cut(s) 1847, 2149
Ppu21I YACGTR 1 cut(s) 562
PpuMI RGGWCCY 1 cut(s) 11
PshAI GACNNNNGTC 1 cut(s) 2978
PshBI ATTAAT 2 cut(s) 182, 1584
Psp124BI GAGCTC 1 cut(s) 2200
Psp5II RGGWCCY 1 cut(s) 11
Psp6I CCWGG 4 cut(s) 222, 399, 1930, 2413
PspEI GGTNACC 1 cut(s) 2853
PspFI CCCAGC 1 cut(s) 262
PspGI CCWGG 4 cut(s) 222, 399, 1930, 2413
PspN4I GGNNCC 5 cut(s) 432, 816, 1687, 2635, 3080
PspPI GGNCC 9 cut(s) 11, 212, 463, 520, 1465, 1726, 2634, 3023, 3078
PspPPI RGGWCCY 1 cut(s) 11
PspXI VCTCGAGB 1 cut(s) 2212
PstI CTGCAG 2 cut(s) 283, 2980
PstNI CAGNNNCTG 1 cut(s) 149
PsuI RGATCY 1 cut(s) 637
PvuII CAGCTG 2 cut(s) 1570, 2051
RseI CAYNNNNRTG 3 cut(s) 946, 1013, 2543
Rsr2I CGGWCCG 1 cut(s) 3023
RsrII CGGWCCG 1 cut(s) 3023
SacI GAGCTC 1 cut(s) 2200
SaqAI TTAA 6 cut(s) 182, 413, 1575, 1584, 2156, 3275
SatI GCNGC 7 cut(s) 279, 530, 578, 1571, 1958, 2049, 2052
Sau3AI GATC 9 cut(s) 160, 313, 367, 637, 1276, 2259, 2547, 3132, 3193
Sau96I GGNCC 9 cut(s) 11, 212, 463, 520, 1465, 1726, 2634, 3023, 3078
SchI GAGTC 2 cut(s) 1847, 2150
SduI GDGCHC 6 cut(s) 105, 668, 1252, 2111, 2200, 2945
SfaNI GCATC 7 cut(s) 103, 937, 998, 1363, 2029, 2355, 2913
SfcI CTRYAG 2 cut(s) 279, 2976
Sfr274I CTCGAG 1 cut(s) 2212
SfuI TTCGAA 1 cut(s) 240
SinI GGWCC 7 cut(s) 11, 212, 1465, 1726, 2634, 3023, 3078
SlaI CTCGAG 1 cut(s) 2212
SmiMI CAYNNNNRTG 3 cut(s) 946, 1013, 2543
SmlI CTYRAG 1 cut(s) 2212
SmoI CTYRAG 1 cut(s) 2212
SnaBI TACGTA 1 cut(s) 562
SseBI AGGCCT 2 cut(s) 2477, 3204
SsiI CCGC 3 cut(s) 1455, 1828, 2239
SspI AATATT 4 cut(s) 180, 2010, 2231, 2655
SspMI CTAG 5 cut(s) 732, 1863, 2043, 2528, 2660
SstI GAGCTC 1 cut(s) 2200
StuI AGGCCT 2 cut(s) 2477, 3204
StyI CCWWGG 1 cut(s) 2659
TaiI ACGT 6 cut(s) 564, 867, 1518, 2082, 2628, 2958
TaqII GACCGA 1 cut(s) 3040
TatI WGTACW 2 cut(s) 2640, 2742
TfiI GAWTC 8 cut(s) 762, 833, 1083, 1548, 1802, 1913, 2242, 2995
Tru1I TTAA 6 cut(s) 182, 413, 1575, 1584, 2156, 3275
Tru9I TTAA 6 cut(s) 182, 413, 1575, 1584, 2156, 3275
TseFI GTSAC 1 cut(s) 2853
TseI GCWGC 7 cut(s) 278, 529, 577, 1570, 1957, 2048, 2051
Tsp45I GTSAC 1 cut(s) 2853
TspGWI ACGGA 1 cut(s) 890
VneI GTGCAC 2 cut(s) 101, 2107
VpaK11BI GGWCC 7 cut(s) 11, 212, 1465, 1726, 2634, 3023, 3078
VspI ATTAAT 2 cut(s) 182, 1584
XagI CCTNNNNNAGG 3 cut(s) 293, 2028, 2838
XapI RAATTY 9 cut(s) 547, 652, 1133, 1213, 1445, 1605, 2356, 3030, 3277
XhoI CTCGAG 1 cut(s) 2212
XmaJI CCTAGG 1 cut(s) 2659
XmiI GTMKAC 2 cut(s) 558, 2982
XspI CTAG 5 cut(s) 732, 1863, 2043, 2528, 2660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.