Rorug06G0445200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000707
Physical Location & Seq
Reverse (-)
57636357 .. 57639346
2990 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0445200.1

Sequence Viewer

Length: 1614 bp
ATGTCAGACATGGCCAGTGAGAGAGATCTCTTATCCACTGAGATCGTCAACCGTGGGATCGAGTCCTCCGGCCCCAATGCCGGCTCGCTCACGTTCTCCGTCAGGGTCCGGAGGCGGCTGCCGGACTTTCTCCAATCGGTGAACCTTAAGTACGTCAAGTTGGGCTACCACCACCTCATCAACAATGCTATATACCTGGCCACCATACCCTTTCTGGTCGTGGTTTTCAGTGCTGAGGTTGGGAGTCTCAGTAGGGAGGAGCTGTGGAAGAAGCTCTGGTTTGATGCGCGTTATGATCTTGCAACCGTGCTTGGTTTCTTTGGGGTCTTTGTGTTCACCTTGTCTGTATACTTCATGTCACGCCCTCGCTCCATCTACCTCATTGATTTTGCTTGCTTTCGCCCTAGCGACGATCTAAAGGTGTCAAAGGAGCAATTCATAGAGCTAGCAAGAAAATCAGGCAAGTTTGATGAACCGAGCCTCGAATTCCAGACTCGAATTCTCAACTCATCAGGTTTAGGAGACGAAACCTACATCCCAAAGTCAGTGATCACCTCCACCGAGAACACTGCAACCATGAAAGAAGGTCGAGCCGAGGCCTCAATGGTGATGTTCGGAGCACTGGACGAGCTCTTCGAAAAGACCAAGGTCCGTCCCAAGGACGTAGGTGTTCTTGTGGTGAATTGCAGCGTATTCAATCCCACACCCTCCTTGTCCGCCATGATCATAAACCACTACAAGATGAGGGGCAACATTTTGAGCTACAATCTGGGCGGCATGGGGTGCAGCGCTGGGATCATAGCCGTTGATTTGGCTAGGGACATGCTTCAGGCAAACCCCAACAACTATGCTGTGGTGGTGAGCACTGAGATGGTGGGATATAATTGGTACCCGGGCTGTGACAGGTCTATGCTCATTCCCAACTGTTTTTTCCGCATGGGTTGCTCCGCCGTGCTTCTCTCCAATCGCCGCCGTGACTACCACCGTGCCAAGTATCGCCTCGAACACATCGTTCGAACACATAAAGGCGCTGACGACCGTAGTTTCAGGTGTGTGTACCAAGAAGAAGATGAGCAAAGACTCAAGGGGCTAAAGATCAGCAAAGAGCTAGTGGAAATTGGTGGTGACGCACTGAAAACCAACATCACCACTCTCGGACCACTAGTCCTGCCCTTCTCGGAGCAGCTCCTCTTTTTCGCTACATTGGTCTCGAGGCACTTGTTCAACAACGGAGCTTCACAGCCCTCTTTATCGTCAGGCAAGAGACCCTACATTCCCGATTTCAAGCTGGCATTTGAGTGCTTCTGCGTGCACTCCGCGAGCAAGACTGTGCTGGATGAGCTGCAGAGAAACCTCGAGCTCAGCGACGAGAACATGGAGGCATCGAGGATGACACTACACCGATTTGGTAACACTTCGAGCAGTAGCATATGGTATGAGCTGGCTTACATGGAAGCAAAAGAGAAAGTGAAGAGAGGAGACCGAGTTTGGCAGTTGGCGTTCGGGTCTGGATTCAAGTGCAACAGCATTGTTTGGCGGTCCATGCGCCGGGTTAGGAAGCCTTCAAGGAATCCATGGCTTGACTGCATTGAAAGATACCCAGTCATGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

537

Amino Acids

61.05

Weight (kDa)

9.01

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAE1_CUT1_RppA PF08392 117 - 406 5.6e-132 FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C PF08541 433 - 513 2.5e-13 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C PF02797 435 - 515 1.1e-09 Chalcone and stilbene synthases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 888
AccB1I GGYRCC 1 cut(s) 888
AccI GTMKAC 1 cut(s) 348
AccII CGCG 2 cut(s) 289, 1319
AccIII TCCGGA 1 cut(s) 108
AciI CCGC 8 cut(s) 115, 717, 774, 934, 948, 970, 1317, 1537
AclWI GGATC 2 cut(s) 65, 803
AcoI YGGCCR 2 cut(s) 12, 198
AcsI RAATTY 2 cut(s) 485, 498
AcuI CTGAAG 1 cut(s) 812
AfaI GTAC 3 cut(s) 152, 890, 1058
AfeI AGCGCT 1 cut(s) 790
AfiI CCNNNNNNNGG 3 cut(s) 80, 658, 1548
AflII CTTAAG 1 cut(s) 146
AgsI TTSAA 6 cut(s) 697, 1225, 1285, 1516, 1566, 1592
AhdI GACNNNNNGTC 1 cut(s) 1163
AhlI ACTAGT 1 cut(s) 1162
AjnI CCWGG 1 cut(s) 195
AjuI GAANNNNNNNTTGG 2 cut(s) 914, 946
Alw21I GWGCWC 5 cut(s) 622, 633, 866, 1314, 1362
Alw26I GTCTC 5 cut(s) 251, 516, 1213, 1258, 1473
Alw44I GTGCAC 1 cut(s) 1310
AlwI GGATC 2 cut(s) 65, 803
Ama87I CYCGRG 3 cut(s) 892, 1210, 1355
Aor13HI TCCGGA 1 cut(s) 108
Aor51HI AGCGCT 1 cut(s) 790
AoxI GGCC 4 cut(s) 12, 70, 198, 597
ApaLI GTGCAC 1 cut(s) 1310
ApeKI GCWGC 5 cut(s) 118, 687, 786, 1183, 1342
ApoI RAATTY 2 cut(s) 485, 498
ArsI GACNNNNNNTTYG 2 cut(s) 617, 649
Asp718I GGTACC 1 cut(s) 888
AspLEI GCGC 4 cut(s) 289, 791, 1031, 1548
AspS9I GGNCC 5 cut(s) 71, 106, 649, 1157, 1539
AsuC2I CCSGG 3 cut(s) 893, 894, 1550
AsuHPI GGTGA 8 cut(s) 151, 328, 544, 619, 691, 871, 1136, 1138
AsuII TTCGAA 2 cut(s) 636, 1015
AsuNHI GCTAGC 1 cut(s) 445
AvaI CYCGRG 3 cut(s) 892, 1210, 1355
AvaII GGWCC 4 cut(s) 106, 649, 1157, 1539
BaeGI GKGCMC 1 cut(s) 1314
BalI TGGCCA 2 cut(s) 14, 200
BanI GGYRCC 1 cut(s) 888
BanII GRGCYC 2 cut(s) 633, 1362
Bbv12I GWGCWC 5 cut(s) 622, 633, 866, 1314, 1362
BbvCI CCTCAGC 1 cut(s) 234
BbvI GCAGC 5 cut(s) 105, 699, 798, 1195, 1329
BccI CCATC 2 cut(s) 380, 865
BceAI ACGGC 3 cut(s) 788, 935, 957
BcgI CGANNNNNNTGC 2 cut(s) 551, 585
BciT130I CCWGG 1 cut(s) 197
BclI TGATCA 2 cut(s) 549, 723
BcnI CCSGG 3 cut(s) 893, 894, 1550
BcoDI GTCTC 5 cut(s) 251, 516, 1213, 1258, 1473
BcuI ACTAGT 1 cut(s) 1162
BfaI CTAG 5 cut(s) 405, 446, 816, 1109, 1163
BfmI CTRYAG 1 cut(s) 1343
BfoI RGCGCY 2 cut(s) 792, 1032
BfrI CTTAAG 1 cut(s) 146
BglII AGATCT 1 cut(s) 25
BisI GCNGC 8 cut(s) 116, 119, 688, 775, 787, 970, 1184, 1343
BlpI GCTNAGC 1 cut(s) 1361
BlsI GCNGC 8 cut(s) 117, 120, 689, 776, 788, 971, 1185, 1344
Bme1390I CCNGG 4 cut(s) 197, 893, 894, 1550
Bme18I GGWCC 4 cut(s) 106, 649, 1157, 1539
BmeRI GACNNNNNGTC 1 cut(s) 1163
BmeT110I CYCGRG 3 cut(s) 892, 1210, 1355
BmgT120I GGNCC 5 cut(s) 71, 106, 649, 1157, 1539
BmiI GGNNCC 3 cut(s) 73, 107, 890
BmrFI CCNGG 4 cut(s) 197, 893, 894, 1550
BmrI ACTGGG 1 cut(s) 1595
BmsI GCATC 2 cut(s) 274, 1391
BmtI GCTAGC 1 cut(s) 449
BmuI ACTGGG 1 cut(s) 1595
BoxI GACNNNNGTC 1 cut(s) 647
Bpu10I CCTNAGC 1 cut(s) 234
Bpu1102I GCTNAGC 1 cut(s) 1361
Bpu14I TTCGAA 2 cut(s) 636, 1015
BpuEI CTTGAG 1 cut(s) 1067
BpuMI CCSGG 3 cut(s) 893, 894, 1550
BsaI GGTCTC 3 cut(s) 1213, 1258, 1473
BsaJI CCNNGG 6 cut(s) 52, 594, 645, 657, 892, 1574
BsaWI WCCGGW 1 cut(s) 108
BsaXI ACNNNNNCTCC 6 cut(s) 235, 248, 265, 278, 1470, 1500
Bsc4I CCNNNNNNNGG 3 cut(s) 80, 658, 1548
Bse118I RCCGGY 1 cut(s) 80
Bse1I ACTGG 3 cut(s) 15, 627, 1601
BseAI TCCGGA 1 cut(s) 108
BseBI CCWGG 1 cut(s) 197
BseDI CCNNGG 6 cut(s) 52, 594, 645, 657, 892, 1574
BseGI GGATG 3 cut(s) 534, 1342, 1395
BseLI CCNNNNNNNGG 3 cut(s) 80, 658, 1548
BseMII CTCAG 5 cut(s) 30, 225, 262, 858, 1375
BseNI ACTGG 3 cut(s) 15, 627, 1601
BseRI GAGGAG 3 cut(s) 272, 1178, 1491
BseSI GKGCMC 1 cut(s) 1314
BseXI GCAGC 5 cut(s) 105, 699, 798, 1195, 1329
BseYI CCCAGC 1 cut(s) 791
BsgI GTGCAG 1 cut(s) 805
Bsh1236I CGCG 2 cut(s) 289, 1319
Bsh1285I CGRYCG 1 cut(s) 1039
BshFI GGCC 4 cut(s) 14, 72, 200, 599
BshNI GGYRCC 1 cut(s) 888
BsiEI CGRYCG 1 cut(s) 1039
BsiHKAI GWGCWC 5 cut(s) 622, 633, 866, 1314, 1362
BsiHKCI CYCGRG 3 cut(s) 892, 1210, 1355
BsiSI CCGG 6 cut(s) 69, 81, 109, 122, 893, 1549
BslFI GGGAC 2 cut(s) 639, 833
BslI CCNNNNNNNGG 3 cut(s) 80, 658, 1548
BsmAI GTCTC 5 cut(s) 251, 516, 1213, 1258, 1473
BsmBI CGTCTC 1 cut(s) 516
BsmFI GGGAC 2 cut(s) 639, 833
BsnI GGCC 4 cut(s) 14, 72, 200, 599
Bso31I GGTCTC 3 cut(s) 1213, 1258, 1473
BsoBI CYCGRG 3 cut(s) 892, 1210, 1355
Bsp119I TTCGAA 2 cut(s) 636, 1015
Bsp1286I GDGCHC 5 cut(s) 622, 633, 866, 1314, 1362
Bsp13I TCCGGA 1 cut(s) 108
Bsp143I GATC 9 cut(s) 25, 42, 57, 295, 412, 549, 723, 795, 1095
Bsp1720I GCTNAGC 1 cut(s) 1361
Bsp19I CCATGG 1 cut(s) 1574
BspACI CCGC 8 cut(s) 115, 717, 774, 934, 948, 970, 1317, 1537
BspANI GGCC 4 cut(s) 14, 72, 200, 599
BspCNI CTCAG 5 cut(s) 31, 226, 261, 859, 1374
BspEI TCCGGA 1 cut(s) 108
BspFNI CGCG 2 cut(s) 289, 1319
BspHI TCATGA 1 cut(s) 1605
BspLI GGNNCC 3 cut(s) 73, 107, 890
BspMAI CTGCAG 1 cut(s) 1347
BspOI GCTAGC 1 cut(s) 449
BspPI GGATC 2 cut(s) 65, 803
BspQI GCTCTTC 1 cut(s) 638
BspT104I TTCGAA 2 cut(s) 636, 1015
BspT107I GGYRCC 1 cut(s) 888
BspTI CTTAAG 1 cut(s) 146
BspTNI GGTCTC 3 cut(s) 1213, 1258, 1473
BsrFI RCCGGY 1 cut(s) 80
BsrI ACTGG 3 cut(s) 15, 627, 1601
BssAI RCCGGY 1 cut(s) 80
BssECI CCNNGG 6 cut(s) 52, 594, 645, 657, 892, 1574
BssMI GATC 9 cut(s) 25, 42, 57, 295, 412, 549, 723, 795, 1095
BssNAI GTATAC 1 cut(s) 349
BssT1I CCWWGG 3 cut(s) 645, 657, 1574
Bst1107I GTATAC 1 cut(s) 349
Bst2UI CCWGG 1 cut(s) 197
Bst4CI ACNGT 6 cut(s) 53, 307, 926, 986, 1040, 1330
Bst6I CTCTTC 2 cut(s) 638, 1466
BstAFI CTTAAG 1 cut(s) 146
BstAPI GCANNNNNTGC 2 cut(s) 783, 942
BstBI TTCGAA 2 cut(s) 636, 1015
BstC8I GCNNGC 8 cut(s) 82, 86, 394, 447, 1290, 1310, 1321, 1443
BstDEI CTNAG 5 cut(s) 39, 234, 248, 867, 1361
BstDSI CCRYGG 2 cut(s) 52, 1574
BstF5I GGATG 3 cut(s) 534, 1342, 1395
BstFNI CGCG 2 cut(s) 289, 1319
BstH2I RGCGCY 2 cut(s) 792, 1032
BstHHI GCGC 4 cut(s) 289, 791, 1031, 1548
BstKTI GATC 9 cut(s) 28, 45, 60, 298, 415, 552, 726, 798, 1098
BstMAI GTCTC 5 cut(s) 251, 516, 1213, 1258, 1473
BstMBI GATC 9 cut(s) 25, 42, 57, 295, 412, 549, 723, 795, 1095
BstMCI CGRYCG 1 cut(s) 1039
BstMWI GCNNNNNNNGC 4 cut(s) 783, 942, 1339, 1543
BstNI CCWGG 1 cut(s) 197
BstNSI RCATGY 1 cut(s) 826
BstPAI GACNNNNGTC 1 cut(s) 647
BstSCI CCNGG 4 cut(s) 195, 891, 892, 1548
BstSFI CTRYAG 1 cut(s) 1343
BstSLI GKGCMC 1 cut(s) 1314
BstUI CGCG 2 cut(s) 289, 1319
BstV1I GCAGC 5 cut(s) 105, 699, 798, 1195, 1329
BstX2I RGATCY 1 cut(s) 25
BstYI RGATCY 1 cut(s) 25
BstZ17I GTATAC 1 cut(s) 349
BsuRI GGCC 4 cut(s) 14, 72, 200, 599
BtgI CCRYGG 2 cut(s) 52, 1574
BtsCI GGATG 3 cut(s) 534, 1342, 1395
BtsI GCAGTG 1 cut(s) 567
BtsIMutI CAGTG 8 cut(s) 22, 36, 235, 552, 567, 620, 864, 1130
Cac8I GCNNGC 8 cut(s) 82, 86, 394, 447, 1290, 1310, 1321, 1443
CciI TCATGA 1 cut(s) 1605
CfoI GCGC 4 cut(s) 289, 791, 1031, 1548
Cfr10I RCCGGY 1 cut(s) 80
Cfr13I GGNCC 5 cut(s) 71, 106, 649, 1157, 1539
Cfr9I CCCGGG 1 cut(s) 892
CseI GACGC 1 cut(s) 1136
Csp6I GTAC 3 cut(s) 151, 889, 1057
CviQI GTAC 3 cut(s) 151, 889, 1057
DdeI CTNAG 5 cut(s) 39, 234, 248, 867, 1361
DpnI GATC 9 cut(s) 27, 44, 59, 297, 414, 551, 725, 797, 1097
DpnII GATC 9 cut(s) 25, 42, 57, 295, 412, 549, 723, 795, 1095
DriI GACNNNNNGTC 1 cut(s) 1163
EaeI YGGCCR 2 cut(s) 12, 198
Eam1104I CTCTTC 2 cut(s) 638, 1466
Eam1105I GACNNNNNGTC 1 cut(s) 1163
EarI CTCTTC 2 cut(s) 638, 1466
EciI GGCGGA 2 cut(s) 706, 937
Ecl136II GAGCTC 2 cut(s) 631, 1360
Eco130I CCWWGG 3 cut(s) 645, 657, 1574
Eco147I AGGCCT 1 cut(s) 599
Eco24I GRGCYC 2 cut(s) 633, 1362
Eco31I GGTCTC 3 cut(s) 1213, 1258, 1473
Eco47I GGWCC 4 cut(s) 106, 649, 1157, 1539
Eco47III AGCGCT 1 cut(s) 790
Eco53kI GAGCTC 2 cut(s) 631, 1360
Eco57I CTGAAG 1 cut(s) 812
Eco88I CYCGRG 3 cut(s) 892, 1210, 1355
EcoICRI GAGCTC 2 cut(s) 631, 1360
EcoRI GAATTC 2 cut(s) 485, 498
EcoRII CCWGG 1 cut(s) 195
EcoT14I CCWWGG 3 cut(s) 645, 657, 1574
EcoT38I GRGCYC 2 cut(s) 633, 1362
ErhI CCWWGG 3 cut(s) 645, 657, 1574
Esp3I CGTCTC 1 cut(s) 516
FaqI GGGAC 2 cut(s) 639, 833
FauNDI CATATG 1 cut(s) 1430
FbaI TGATCA 2 cut(s) 549, 723
FblI GTMKAC 1 cut(s) 348
Fnu4HI GCNGC 8 cut(s) 116, 119, 688, 775, 787, 970, 1184, 1343
FokI GGATG 3 cut(s) 521, 1349, 1402
FriOI GRGCYC 2 cut(s) 633, 1362
Fsp4HI GCNGC 8 cut(s) 116, 119, 688, 775, 787, 970, 1184, 1343
FspBI CTAG 5 cut(s) 405, 446, 816, 1109, 1163
GlaI GCGC 4 cut(s) 288, 790, 1030, 1547
GluI GCNGC 8 cut(s) 116, 119, 688, 775, 787, 970, 1184, 1343
GsaI CCCAGC 1 cut(s) 795
HaeII RGCGCY 2 cut(s) 792, 1032
HaeIII GGCC 4 cut(s) 14, 72, 200, 599
HapII CCGG 6 cut(s) 69, 81, 109, 122, 893, 1549
HgaI GACGC 1 cut(s) 1136
HhaI GCGC 4 cut(s) 289, 791, 1031, 1548
Hin6I GCGC 4 cut(s) 287, 789, 1029, 1546
HinP1I GCGC 4 cut(s) 287, 789, 1029, 1546
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HinfI GANTC 6 cut(s) 62, 244, 493, 1080, 1512, 1570
HpaII CCGG 6 cut(s) 69, 81, 109, 122, 893, 1549
HphI GGTGA 8 cut(s) 151, 328, 544, 619, 691, 871, 1136, 1138
Hpy166II GTNNAC 6 cut(s) 49, 142, 336, 349, 1057, 1312
Hpy188I TCNGA 4 cut(s) 7, 617, 1157, 1180
Hpy188III TCNNGA 6 cut(s) 109, 490, 1210, 1277, 1509, 1606
Hpy8I GTNNAC 6 cut(s) 49, 142, 336, 349, 1057, 1312
Hpy99I CGWCG 2 cut(s) 413, 1370
HpyAV CCTTC 3 cut(s) 578, 1183, 1572
HpyCH4III ACNGT 6 cut(s) 53, 307, 926, 986, 1040, 1330
HpyCH4IV ACGT 3 cut(s) 92, 153, 663
HpyCH4V TGCA 8 cut(s) 302, 572, 687, 786, 1312, 1345, 1521, 1587
HpyF10VI GCNNNNNNNGC 4 cut(s) 783, 942, 1339, 1543
HpyF3I CTNAG 5 cut(s) 39, 234, 248, 867, 1361
HpySE526I ACGT 3 cut(s) 92, 153, 663
HspAI GCGC 4 cut(s) 287, 789, 1029, 1546
Kpn2I TCCGGA 1 cut(s) 108
KpnI GGTACC 1 cut(s) 892
KroI GCCGGC 1 cut(s) 80
KroNI GCCGGC 1 cut(s) 82
Ksp22I TGATCA 2 cut(s) 549, 723
Kzo9I GATC 9 cut(s) 25, 42, 57, 295, 412, 549, 723, 795, 1095
LguI GCTCTTC 1 cut(s) 638
LmnI GCTCC 8 cut(s) 259, 374, 430, 617, 950, 1180, 1191, 1232
Lsp1109I GCAGC 5 cut(s) 105, 699, 798, 1195, 1329
LweI GCATC 2 cut(s) 274, 1391
MaeI CTAG 5 cut(s) 405, 446, 816, 1109, 1163
MaeII ACGT 3 cut(s) 92, 153, 663
MaeIII GTNAC 5 cut(s) 357, 899, 974, 1124, 1409
MalI GATC 9 cut(s) 27, 44, 59, 297, 414, 551, 725, 797, 1097
MboI GATC 9 cut(s) 25, 42, 57, 295, 412, 549, 723, 795, 1095
MboII GAAGA 5 cut(s) 280, 625, 1076, 1079, 1483
MflI RGATCY 1 cut(s) 25
MhlI GDGCHC 5 cut(s) 622, 633, 866, 1314, 1362
MlsI TGGCCA 2 cut(s) 14, 200
MluCI AATT 7 cut(s) 434, 485, 498, 682, 883, 1116, 1609
MluNI TGGCCA 2 cut(s) 14, 200
MlyI GAGTC 4 cut(s) 71, 253, 487, 1074
Mox20I TGGCCA 2 cut(s) 14, 200
MroI TCCGGA 1 cut(s) 108
MroNI GCCGGC 1 cut(s) 80
MscI TGGCCA 2 cut(s) 14, 200
MseI TTAA 1 cut(s) 147
MslI CAYNNNNRTG 2 cut(s) 869, 1297
Msp20I TGGCCA 2 cut(s) 14, 200
MspCI CTTAAG 1 cut(s) 146
MspI CCGG 6 cut(s) 69, 81, 109, 122, 893, 1549
MspR9I CCNGG 4 cut(s) 197, 893, 894, 1550
MvaI CCWGG 1 cut(s) 197
MvnI CGCG 2 cut(s) 289, 1319
MwoI GCNNNNNNNGC 4 cut(s) 783, 942, 1339, 1543
NaeI GCCGGC 1 cut(s) 82
NciI CCSGG 3 cut(s) 893, 894, 1550
NcoI CCATGG 1 cut(s) 1574
NdeI CATATG 1 cut(s) 1430
NdeII GATC 9 cut(s) 25, 42, 57, 295, 412, 549, 723, 795, 1095
NgoMIV GCCGGC 1 cut(s) 80
NheI GCTAGC 1 cut(s) 445
NlaIV GGNNCC 3 cut(s) 73, 107, 890
NmeAIII GCCGAG 1 cut(s) 619
NmuCI GTSAC 4 cut(s) 357, 899, 974, 1124
NspI RCATGY 1 cut(s) 826
NspV TTCGAA 2 cut(s) 636, 1015
PaeR7I CTCGAG 2 cut(s) 1210, 1355
PagI TCATGA 1 cut(s) 1605
PceI AGGCCT 1 cut(s) 599
PciSI GCTCTTC 1 cut(s) 638
PcsI WCGNNNNNNNCGW 3 cut(s) 633, 1008, 1362
PdiI GCCGGC 1 cut(s) 82
PfeI GAWTC 2 cut(s) 1512, 1570
PkrI GCNGC 8 cut(s) 117, 120, 689, 776, 788, 971, 1185, 1344
PleI GAGTC 4 cut(s) 70, 252, 487, 1074
PpsI GAGTC 4 cut(s) 70, 252, 487, 1074
PshAI GACNNNNGTC 1 cut(s) 647
Psp124BI GAGCTC 2 cut(s) 633, 1362
Psp6I CCWGG 1 cut(s) 195
PspFI CCCAGC 1 cut(s) 791
PspGI CCWGG 1 cut(s) 195
PspN4I GGNNCC 3 cut(s) 73, 107, 890
PspPI GGNCC 5 cut(s) 71, 106, 649, 1157, 1539
PspXI VCTCGAGB 1 cut(s) 1355
PsrI GAACNNNNNNTAC 2 cut(s) 134, 166
PstI CTGCAG 1 cut(s) 1347
PsuI RGATCY 1 cut(s) 25
RsaI GTAC 3 cut(s) 152, 890, 1058
RsaNI GTAC 3 cut(s) 151, 889, 1057
RseI CAYNNNNRTG 2 cut(s) 869, 1297
SacI GAGCTC 2 cut(s) 633, 1362
SapI GCTCTTC 1 cut(s) 638
SaqAI TTAA 1 cut(s) 147
SatI GCNGC 8 cut(s) 116, 119, 688, 775, 787, 970, 1184, 1343
Sau3AI GATC 9 cut(s) 25, 42, 57, 295, 412, 549, 723, 795, 1095
Sau96I GGNCC 5 cut(s) 71, 106, 649, 1157, 1539
SchI GAGTC 4 cut(s) 71, 253, 487, 1074
ScrFI CCNGG 4 cut(s) 197, 893, 894, 1550
SduI GDGCHC 5 cut(s) 622, 633, 866, 1314, 1362
SfaNI GCATC 2 cut(s) 274, 1391
SfcI CTRYAG 1 cut(s) 1343
Sfr274I CTCGAG 2 cut(s) 1210, 1355
SfuI TTCGAA 2 cut(s) 636, 1015
SinI GGWCC 4 cut(s) 106, 649, 1157, 1539
SlaI CTCGAG 2 cut(s) 1210, 1355
SmaI CCCGGG 1 cut(s) 894
SmiMI CAYNNNNRTG 2 cut(s) 869, 1297
SmlI CTYRAG 4 cut(s) 146, 1082, 1210, 1355
SmoI CTYRAG 4 cut(s) 146, 1082, 1210, 1355
SpeI ACTAGT 1 cut(s) 1162
Sse9I AATT 7 cut(s) 434, 485, 498, 682, 883, 1116, 1609
SseBI AGGCCT 1 cut(s) 599
SsiI CCGC 8 cut(s) 115, 717, 774, 934, 948, 970, 1317, 1537
SspMI CTAG 5 cut(s) 405, 446, 816, 1109, 1163
SstI GAGCTC 2 cut(s) 633, 1362
StuI AGGCCT 1 cut(s) 599
StyD4I CCNGG 4 cut(s) 195, 891, 892, 1548
StyI CCWWGG 3 cut(s) 645, 657, 1574
TaaI ACNGT 6 cut(s) 53, 307, 926, 986, 1040, 1330
TaiI ACGT 3 cut(s) 95, 156, 666
TaqII GACCGA 1 cut(s) 1497
TasI AATT 7 cut(s) 434, 485, 498, 682, 883, 1116, 1609
TauI GCSGC 3 cut(s) 118, 777, 972
TfiI GAWTC 2 cut(s) 1512, 1570
Tru1I TTAA 1 cut(s) 147
Tru9I TTAA 1 cut(s) 147
TscAI CASTG 8 cut(s) 22, 43, 235, 552, 574, 627, 871, 1137
TseFI GTSAC 4 cut(s) 357, 899, 974, 1124
TseI GCWGC 5 cut(s) 118, 687, 786, 1183, 1342
Tsp45I GTSAC 4 cut(s) 357, 899, 974, 1124
TspDTI ATGAA 4 cut(s) 343, 427, 486, 593
TspGWI ACGGA 3 cut(s) 88, 641, 1245
TspMI CCCGGG 1 cut(s) 892
TspRI CASTG 8 cut(s) 22, 43, 235, 552, 574, 627, 871, 1137
Vha464I CTTAAG 1 cut(s) 146
VneI GTGCAC 1 cut(s) 1310
VpaK11BI GGWCC 4 cut(s) 106, 649, 1157, 1539
XapI RAATTY 2 cut(s) 485, 498
XceI RCATGY 1 cut(s) 826
XcmI CCANNNNNNNNNTGG 1 cut(s) 211
XhoI CTCGAG 2 cut(s) 1210, 1355
XmaI CCCGGG 1 cut(s) 892
XmiI GTMKAC 1 cut(s) 348
XspI CTAG 5 cut(s) 405, 446, 816, 1109, 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.