Large subunit GTPase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 463 |
| AccB1I | GGYRCC | 1 cut(s) | 976 |
| AciI | CCGC | 5 cut(s) | 648, 721, 847, 914, 989 |
| AcsI | RAATTY | 1 cut(s) | 277 |
| AcyI | GRCGYC | 2 cut(s) | 460, 825 |
| AfaI | GTAC | 2 cut(s) | 620, 770 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 86, 720 |
| AflIII | ACRYGT | 1 cut(s) | 606 |
| AgsI | TTSAA | 7 cut(s) | 47, 274, 304, 468, 485, 613, 644 |
| AjnI | CCWGG | 5 cut(s) | 4, 12, 575, 891, 972 |
| AluBI | AGCT | 5 cut(s) | 215, 230, 289, 703, 1021 |
| AluI | AGCT | 5 cut(s) | 215, 230, 289, 703, 1021 |
| Alw21I | GWGCWC | 1 cut(s) | 1023 |
| Alw26I | GTCTC | 3 cut(s) | 3, 526, 974 |
| AoxI | GGCC | 4 cut(s) | 364, 840, 951, 986 |
| ApeKI | GCWGC | 1 cut(s) | 934 |
| ApoI | RAATTY | 1 cut(s) | 277 |
| AspS9I | GGNCC | 2 cut(s) | 188, 364 |
| AsuHPI | GGTGA | 1 cut(s) | 422 |
| AsuII | TTCGAA | 1 cut(s) | 653 |
| AvaII | GGWCC | 1 cut(s) | 188 |
| BanI | GGYRCC | 1 cut(s) | 976 |
| BanII | GRGCYC | 1 cut(s) | 1023 |
| BbsI | GAAGAC | 1 cut(s) | 632 |
| Bbv12I | GWGCWC | 1 cut(s) | 1023 |
| BbvI | GCAGC | 1 cut(s) | 946 |
| BccI | CCATC | 3 cut(s) | 199, 551, 571 |
| BceAI | ACGGC | 3 cut(s) | 698, 812, 976 |
| BciT130I | CCWGG | 5 cut(s) | 6, 14, 577, 893, 974 |
| BciVI | GTATCC | 2 cut(s) | 115, 187 |
| BcoDI | GTCTC | 3 cut(s) | 3, 526, 974 |
| BfaI | CTAG | 3 cut(s) | 75, 497, 794 |
| BfmI | CTRYAG | 1 cut(s) | 237 |
| BfuI | GTATCC | 2 cut(s) | 115, 187 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 985 |
| BisI | GCNGC | 4 cut(s) | 648, 722, 935, 989 |
| BlsI | GCNGC | 4 cut(s) | 649, 723, 936, 990 |
| Bme1390I | CCNGG | 5 cut(s) | 6, 14, 577, 893, 974 |
| Bme18I | GGWCC | 1 cut(s) | 188 |
| BmgT120I | GGNCC | 2 cut(s) | 188, 364 |
| BmiI | GGNNCC | 3 cut(s) | 132, 189, 978 |
| BmrFI | CCNGG | 5 cut(s) | 6, 14, 577, 893, 974 |
| BmsI | GCATC | 6 cut(s) | 298, 320, 499, 499, 768, 771 |
| BpiI | GAAGAC | 1 cut(s) | 632 |
| BpmI | CTGGAG | 3 cut(s) | 27, 956, 984 |
| Bpu14I | TTCGAA | 1 cut(s) | 653 |
| Bsa29I | ATCGAT | 1 cut(s) | 66 |
| BsaAI | YACGTR | 1 cut(s) | 983 |
| BsaHI | GRCGYC | 2 cut(s) | 460, 825 |
| BsaI | GGTCTC | 1 cut(s) | 3 |
| BsaJI | CCNNGG | 3 cut(s) | 576, 714, 992 |
| BsaWI | WCCGGW | 1 cut(s) | 86 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 30 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 86, 720 |
| Bse118I | RCCGGY | 1 cut(s) | 962 |
| Bse1I | ACTGG | 2 cut(s) | 377, 733 |
| Bse3DI | GCAATG | 1 cut(s) | 394 |
| BseBI | CCWGG | 5 cut(s) | 6, 14, 577, 893, 974 |
| BseCI | ATCGAT | 1 cut(s) | 66 |
| BseDI | CCNNGG | 3 cut(s) | 576, 714, 992 |
| BseGI | GGATG | 2 cut(s) | 313, 783 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 86, 720 |
| BseMI | GCAATG | 1 cut(s) | 394 |
| BseMII | CTCAG | 1 cut(s) | 186 |
| BseNI | ACTGG | 2 cut(s) | 377, 733 |
| BseRI | GAGGAG | 2 cut(s) | 962, 1031 |
| BseXI | GCAGC | 1 cut(s) | 946 |
| BseYI | CCCAGC | 1 cut(s) | 703 |
| Bsh1285I | CGRYCG | 1 cut(s) | 847 |
| BshFI | GGCC | 4 cut(s) | 366, 842, 953, 988 |
| BshNI | GGYRCC | 1 cut(s) | 976 |
| BshVI | ATCGAT | 1 cut(s) | 66 |
| BsiEI | CGRYCG | 1 cut(s) | 847 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1023 |
| BsiSI | CCGG | 3 cut(s) | 87, 917, 963 |
| BslFI | GGGAC | 1 cut(s) | 471 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 86, 720 |
| BsmAI | GTCTC | 3 cut(s) | 3, 526, 974 |
| BsmFI | GGGAC | 1 cut(s) | 471 |
| BsnI | GGCC | 4 cut(s) | 366, 842, 953, 988 |
| Bso31I | GGTCTC | 1 cut(s) | 3 |
| Bsp119I | TTCGAA | 1 cut(s) | 653 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1023 |
| Bsp1407I | TGTACA | 2 cut(s) | 618, 768 |
| Bsp143I | GATC | 1 cut(s) | 63 |
| BspACI | CCGC | 5 cut(s) | 648, 721, 847, 914, 989 |
| BspANI | GGCC | 4 cut(s) | 366, 842, 953, 988 |
| BspCNI | CTCAG | 1 cut(s) | 187 |
| BspDI | ATCGAT | 1 cut(s) | 66 |
| BspHI | TCATGA | 1 cut(s) | 60 |
| BspLI | GGNNCC | 3 cut(s) | 132, 189, 978 |
| BspQI | GCTCTTC | 1 cut(s) | 703 |
| BspT104I | TTCGAA | 1 cut(s) | 653 |
| BspT107I | GGYRCC | 1 cut(s) | 976 |
| BspTNI | GGTCTC | 1 cut(s) | 3 |
| BsrDI | GCAATG | 1 cut(s) | 394 |
| BsrFI | RCCGGY | 1 cut(s) | 962 |
| BsrGI | TGTACA | 2 cut(s) | 618, 768 |
| BsrI | ACTGG | 2 cut(s) | 377, 733 |
| BssAI | RCCGGY | 1 cut(s) | 962 |
| BssECI | CCNNGG | 3 cut(s) | 576, 714, 992 |
| BssMI | GATC | 1 cut(s) | 63 |
| BssNI | GRCGYC | 2 cut(s) | 460, 825 |
| Bst2UI | CCWGG | 5 cut(s) | 6, 14, 577, 893, 974 |
| Bst4CI | ACNGT | 1 cut(s) | 635 |
| Bst6I | CTCTTC | 1 cut(s) | 703 |
| BstACI | GRCGYC | 2 cut(s) | 460, 825 |
| BstAUI | TGTACA | 2 cut(s) | 618, 768 |
| BstBAI | YACGTR | 1 cut(s) | 983 |
| BstBI | TTCGAA | 1 cut(s) | 653 |
| BstC8I | GCNNGC | 2 cut(s) | 438, 960 |
| BstDEI | CTNAG | 1 cut(s) | 195 |
| BstDSI | CCRYGG | 2 cut(s) | 714, 992 |
| BstF5I | GGATG | 2 cut(s) | 313, 783 |
| BstKTI | GATC | 1 cut(s) | 66 |
| BstMAI | GTCTC | 3 cut(s) | 3, 526, 974 |
| BstMBI | GATC | 1 cut(s) | 63 |
| BstMCI | CGRYCG | 1 cut(s) | 847 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 446, 959, 985 |
| BstNI | CCWGG | 5 cut(s) | 6, 14, 577, 893, 974 |
| BstSCI | CCNGG | 5 cut(s) | 4, 12, 575, 891, 972 |
| BstSFI | CTRYAG | 1 cut(s) | 237 |
| BstV1I | GCAGC | 1 cut(s) | 946 |
| BstV2I | GAAGAC | 1 cut(s) | 632 |
| Bsu15I | ATCGAT | 1 cut(s) | 66 |
| BsuI | GTATCC | 2 cut(s) | 115, 187 |
| BsuRI | GGCC | 4 cut(s) | 366, 842, 953, 988 |
| BsuTUI | ATCGAT | 1 cut(s) | 66 |
| BtgI | CCRYGG | 2 cut(s) | 714, 992 |
| BtsCI | GGATG | 2 cut(s) | 313, 783 |
| BtsIMutI | CAGTG | 1 cut(s) | 1017 |
| Cac8I | GCNNGC | 2 cut(s) | 438, 960 |
| CciI | TCATGA | 1 cut(s) | 60 |
| Cfr10I | RCCGGY | 1 cut(s) | 962 |
| Cfr13I | GGNCC | 2 cut(s) | 188, 364 |
| ClaI | ATCGAT | 1 cut(s) | 66 |
| CseI | GACGC | 1 cut(s) | 833 |
| CsiI | ACCWGGT | 1 cut(s) | 12 |
| Csp6I | GTAC | 2 cut(s) | 619, 769 |
| CviAII | CATG | 4 cut(s) | 61, 182, 326, 766 |
| CviQI | GTAC | 2 cut(s) | 619, 769 |
| DdeI | CTNAG | 1 cut(s) | 195 |
| DpnI | GATC | 1 cut(s) | 65 |
| DpnII | GATC | 1 cut(s) | 63 |
| Eam1104I | CTCTTC | 1 cut(s) | 703 |
| EarI | CTCTTC | 1 cut(s) | 703 |
| Ecl136II | GAGCTC | 1 cut(s) | 1021 |
| Eco147I | AGGCCT | 1 cut(s) | 953 |
| Eco24I | GRGCYC | 1 cut(s) | 1023 |
| Eco31I | GGTCTC | 1 cut(s) | 3 |
| Eco47I | GGWCC | 1 cut(s) | 188 |
| Eco53kI | GAGCTC | 1 cut(s) | 1021 |
| EcoICRI | GAGCTC | 1 cut(s) | 1021 |
| EcoO109I | RGGNCCY | 1 cut(s) | 364 |
| EcoRII | CCWGG | 5 cut(s) | 4, 12, 575, 891, 972 |
| EcoT22I | ATGCAT | 1 cut(s) | 313 |
| EcoT38I | GRGCYC | 1 cut(s) | 1023 |
| FaeI | CATG | 4 cut(s) | 64, 185, 329, 769 |
| FaqI | GGGAC | 1 cut(s) | 471 |
| FatI | CATG | 4 cut(s) | 60, 181, 325, 765 |
| FauI | CCCGC | 1 cut(s) | 921 |
| Fnu4HI | GCNGC | 4 cut(s) | 648, 722, 935, 989 |
| FokI | GGATG | 2 cut(s) | 320, 790 |
| FriOI | GRGCYC | 1 cut(s) | 1023 |
| Fsp4HI | GCNGC | 4 cut(s) | 648, 722, 935, 989 |
| FspBI | CTAG | 3 cut(s) | 75, 497, 794 |
| GluI | GCNGC | 4 cut(s) | 648, 722, 935, 989 |
| GsaI | CCCAGC | 1 cut(s) | 707 |
| GsuI | CTGGAG | 3 cut(s) | 27, 956, 984 |
| HaeIII | GGCC | 4 cut(s) | 366, 842, 953, 988 |
| HapII | CCGG | 3 cut(s) | 87, 917, 963 |
| HgaI | GACGC | 1 cut(s) | 833 |
| Hin1I | GRCGYC | 2 cut(s) | 460, 825 |
| Hin1II | CATG | 4 cut(s) | 64, 185, 329, 769 |
| HindIII | AAGCTT | 1 cut(s) | 287 |
| HinfI | GANTC | 7 cut(s) | 83, 255, 354, 481, 739, 797, 997 |
| HpaII | CCGG | 3 cut(s) | 87, 917, 963 |
| HphI | GGTGA | 1 cut(s) | 422 |
| Hpy166II | GTNNAC | 2 cut(s) | 621, 996 |
| Hpy188I | TCNGA | 1 cut(s) | 196 |
| Hpy188III | TCNNGA | 6 cut(s) | 61, 80, 351, 497, 794, 1001 |
| Hpy8I | GTNNAC | 2 cut(s) | 621, 996 |
| Hpy99I | CGWCG | 3 cut(s) | 639, 827, 1028 |
| HpyAV | CCTTC | 6 cut(s) | 415, 439, 768, 781, 862, 937 |
| HpyCH4III | ACNGT | 1 cut(s) | 635 |
| HpyCH4IV | ACGT | 3 cut(s) | 460, 606, 982 |
| HpyCH4V | TGCA | 5 cut(s) | 311, 387, 440, 781, 958 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 446, 959, 985 |
| HpyF3I | CTNAG | 1 cut(s) | 195 |
| HpySE526I | ACGT | 3 cut(s) | 460, 606, 982 |
| Hsp92I | GRCGYC | 2 cut(s) | 460, 825 |
| Hsp92II | CATG | 4 cut(s) | 64, 185, 329, 769 |
| Kzo9I | GATC | 1 cut(s) | 63 |
| LguI | GCTCTTC | 1 cut(s) | 703 |
| LmnI | GCTCC | 4 cut(s) | 558, 919, 931, 1018 |
| Lsp1109I | GCAGC | 1 cut(s) | 946 |
| LweI | GCATC | 6 cut(s) | 298, 320, 499, 499, 768, 771 |
| MabI | ACCWGGT | 1 cut(s) | 12 |
| MaeI | CTAG | 3 cut(s) | 75, 497, 794 |
| MaeII | ACGT | 3 cut(s) | 460, 606, 982 |
| MaeIII | GTNAC | 2 cut(s) | 296, 802 |
| MalI | GATC | 1 cut(s) | 65 |
| MboI | GATC | 1 cut(s) | 63 |
| MboII | GAAGA | 8 cut(s) | 264, 518, 538, 632, 706, 720, 796, 872 |
| MfeI | CAATTG | 3 cut(s) | 33, 246, 468 |
| MhlI | GDGCHC | 1 cut(s) | 1023 |
| MlyI | GAGTC | 1 cut(s) | 991 |
| Mph1103I | ATGCAT | 1 cut(s) | 313 |
| MspI | CCGG | 3 cut(s) | 87, 917, 963 |
| MspR9I | CCNGG | 5 cut(s) | 6, 14, 577, 893, 974 |
| MunI | CAATTG | 3 cut(s) | 33, 246, 468 |
| MvaI | CCWGG | 5 cut(s) | 6, 14, 577, 893, 974 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 446, 959, 985 |
| NdeII | GATC | 1 cut(s) | 63 |
| NlaIII | CATG | 4 cut(s) | 64, 185, 329, 769 |
| NlaIV | GGNNCC | 3 cut(s) | 132, 189, 978 |
| NmuCI | GTSAC | 2 cut(s) | 296, 802 |
| NsiI | ATGCAT | 1 cut(s) | 313 |
| NspV | TTCGAA | 1 cut(s) | 653 |
| PagI | TCATGA | 1 cut(s) | 60 |
| PceI | AGGCCT | 1 cut(s) | 953 |
| PciSI | GCTCTTC | 1 cut(s) | 703 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 831, 840 |
| PfeI | GAWTC | 6 cut(s) | 83, 255, 354, 481, 739, 797 |
| PkrI | GCNGC | 4 cut(s) | 649, 723, 936, 990 |
| PleI | GAGTC | 1 cut(s) | 991 |
| PpsI | GAGTC | 1 cut(s) | 991 |
| Ppu21I | YACGTR | 1 cut(s) | 983 |
| Psp124BI | GAGCTC | 1 cut(s) | 1023 |
| Psp6I | CCWGG | 5 cut(s) | 4, 12, 575, 891, 972 |
| PspFI | CCCAGC | 1 cut(s) | 703 |
| PspGI | CCWGG | 5 cut(s) | 4, 12, 575, 891, 972 |
| PspN4I | GGNNCC | 3 cut(s) | 132, 189, 978 |
| PspPI | GGNCC | 2 cut(s) | 188, 364 |
| RsaI | GTAC | 2 cut(s) | 620, 770 |
| RsaNI | GTAC | 2 cut(s) | 619, 769 |
| SacI | GAGCTC | 1 cut(s) | 1023 |
| SapI | GCTCTTC | 1 cut(s) | 703 |
| SatI | GCNGC | 4 cut(s) | 648, 722, 935, 989 |
| Sau3AI | GATC | 1 cut(s) | 63 |
| Sau96I | GGNCC | 2 cut(s) | 188, 364 |
| SchI | GAGTC | 1 cut(s) | 991 |
| ScrFI | CCNGG | 5 cut(s) | 6, 14, 577, 893, 974 |
| SduI | GDGCHC | 1 cut(s) | 1023 |
| SexAI | ACCWGGT | 1 cut(s) | 12 |
| SfaNI | GCATC | 6 cut(s) | 298, 320, 499, 499, 768, 771 |
| SfcI | CTRYAG | 1 cut(s) | 237 |
| SfuI | TTCGAA | 1 cut(s) | 653 |
| SinI | GGWCC | 1 cut(s) | 188 |
| SseBI | AGGCCT | 1 cut(s) | 953 |
| SsiI | CCGC | 5 cut(s) | 648, 721, 847, 914, 989 |
| SspMI | CTAG | 3 cut(s) | 75, 497, 794 |
| SstI | GAGCTC | 1 cut(s) | 1023 |
| StuI | AGGCCT | 1 cut(s) | 953 |
| StyD4I | CCNGG | 5 cut(s) | 4, 12, 575, 891, 972 |
| TaaI | ACNGT | 1 cut(s) | 635 |
| TaiI | ACGT | 3 cut(s) | 463, 609, 985 |
| TaqI | TCGA | 6 cut(s) | 66, 350, 653, 822, 834, 1023 |
| TatI | WGTACW | 2 cut(s) | 618, 768 |
| TauI | GCSGC | 3 cut(s) | 650, 724, 991 |
| TfiI | GAWTC | 6 cut(s) | 83, 255, 354, 481, 739, 797 |
| TscAI | CASTG | 1 cut(s) | 1017 |
| TseFI | GTSAC | 2 cut(s) | 296, 802 |
| TseI | GCWGC | 1 cut(s) | 934 |
| Tsp45I | GTSAC | 2 cut(s) | 296, 802 |
| TspDTI | ATGAA | 6 cut(s) | 42, 183, 299, 346, 416, 713 |
| TspGWI | ACGGA | 3 cut(s) | 638, 790, 821 |
| TspRI | CASTG | 1 cut(s) | 1017 |
| VpaK11BI | GGWCC | 1 cut(s) | 188 |
| XapI | RAATTY | 1 cut(s) | 277 |
| XbaI | TCTAGA | 2 cut(s) | 496, 793 |
| XspI | CTAG | 3 cut(s) | 75, 497, 794 |
| ZraI | GACGTC | 1 cut(s) | 461 |
| Zsp2I | ATGCAT | 1 cut(s) | 313 |